Qiime Analysis Results

Open Reference OTU Picking - Analysis 4: 39 samples only (2013-06-28) Sample Mapping Meta Info: View (39 good samples) Reference Sequences: HOMD 16S rRNA RefSeq V12 Sequence % Identity Cutoff: 97% Minimal No. of Sequences in OTU: 2 (OTUs with singleton were discarded) Total No. of OTUs: 4925 Summary OTU Heat Maps: View OTU Network: Download OTU Network data to view in the Cytoscape program. Follow instruction here Taxonomy Summary Plots: Area Charts Bar Charts Alpha Diversity: Rare Faction Plots Beta Diversity: Principal Coordinate Analysis (PCoA) Plots Matrix 2D 3D Distance Histograms . NA unifrac_g 2d.discrete 2d.continuous 3d.discrete 3d.continuous NA binary_ochiai 2d.discrete 2d.continuous 3d.discrete 3d.continuous View chord 2d.discrete 2d.continuous 3d.discrete 3d.continuous View gower 2d.discrete 2d.continuous 3d.discrete 3d.continuous View hellinger 2d.discrete 2d.continuous 3d.discrete 3d.continuous View binary_jaccard 2d.discrete 2d.continuous 3d.discrete 3d.continuous View binary_chord 2d.discrete 2d.continuous 3d.discrete 3d.continuous View euclidean 2d.discrete 2d.continuous 3d.discrete 3d.continuous View binary_chisq 2d.discrete 2d.continuous 3d.discrete 3d.continuous View bray_curtis_magurran 2d.discrete 2d.continuous 3d.discrete 3d.continuous View unifrac 2d.discrete 2d.continuous 3d.discrete 3d.continuous View chisq 2d.discrete 2d.continuous 3d.discrete 3d.continuous View binary_pearson 2d.discrete 2d.continuous 3d.discrete 3d.continuous View binary_lennon 2d.discrete 2d.continuous 3d.discrete 3d.continuous View spearman_approx 2d.discrete 2d.continuous 3d.discrete 3d.continuous View soergel 2d.discrete 2d.continuous 3d.discrete 3d.continuous View manhattan 2d.discrete 2d.continuous 3d.discrete 3d.continuous View binary_sorensen_dice 2d.discrete 2d.continuous 3d.discrete 3d.continuous View abund_jaccard 2d.discrete 2d.continuous 3d.discrete 3d.continuous View unweighted_unifrac_full_tree 2d.discrete 2d.continuous 3d.discrete 3d.continuous View binary_otu_gain 2d.discrete 2d.continuous 3d.discrete 3d.continuous NA binary_euclidean 2d.discrete 2d.continuous 3d.discrete 3d.continuous View morisita_horn 2d.discrete 2d.continuous 3d.discrete 3d.continuous NA bray_curtis 2d.discrete 2d.continuous 3d.discrete 3d.continuous View bray_curtis_faith 2d.discrete 2d.continuous 3d.discrete 3d.continuous View unweighted_unifrac 2d.discrete 2d.continuous 3d.discrete 3d.continuous View canberra 2d.discrete 2d.continuous 3d.discrete 3d.continuous View unifrac_g_full_tree 2d.discrete 2d.continuous 3d.discrete 3d.continuous NA weighted_unifrac 2d.discrete 2d.continuous 3d.discrete 3d.continuous View weighted_normalized_unifrac 2d.discrete 2d.continuous 3d.discrete 3d.continuous View kulczynski 2d.discrete 2d.continuous 3d.discrete 3d.continuous View binary_hamming 2d.discrete 2d.continuous 3d.discrete 3d.continuous View specprof 2d.discrete 2d.continuous 3d.discrete 3d.continuous View pearson 2d.discrete 2d.continuous 3d.discrete 3d.continuous View * Please try different web browsers if any link does not work properly.