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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Lactobacillus plantarum WCFS1 (SEQF1965.3)
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NCBI Annotation for SEQF1965.3
Genome selected: Lactobacillus plantarum WCFS1
Contigs:4 Bases:3348624 bps
CDS:3108 rRNA:15
tmRNA:0 tRNA:70
Annotation Table [page:7]
Number of Records Found: 3108 [7 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
3001 AL935263.2 CCC80580.1 open 1857 [NA] 618 [AA] 3235592-3237448 lp_3622 sorbitol operon transcription antiterminator,BglG family
3002 AL935263.2 CCC80581.1 open 804 [NA] 267 [AA] 3237463-3238266 lp_3623 sorbitol-6-phosphate 2-dehydrogenase
3003 AL935263.2 CCC80582.1 open 1008 [NA] 335 [AA] 3238621-3239628 lp_3625 transcription regulator, LacI family
3004 AL935263.2 CCC80583.1 open 1386 [NA] 461 [AA] 3239713-3241098 lp_3626 maltose-isomaltose oligosaccharide proton symporter, GPH family
3005 AL935263.2 CCC80584.1 open 1677 [NA] 558 [AA] 3241117-3242793 lp_3627 exo-alfa-1,4-glucosidase
3006 AL935263.2 CCC80585.1 open 1386 [NA] 461 [AA] 3242952-3244337 lp_3629 beta-galactosidase
3007 AL935263.2 CCC80586.1 open 879 [NA] 292 [AA] 3244349-3245227 lp_3630 bifunctional protien: transcription regulator; sugar kinase, ROK family
3008 AL935263.2 CCC80587.1 open 2700 [NA] 899 [AA] 3245227-3247926 lp_3631 alpha-mannosidase (promiscuous)
3009 AL935263.2 CCC80588.1 open 1290 [NA] 429 [AA] 3247933-3249222 lp_3632 glycosyl hydrolase, DUF336 family
3010 AL935263.2 CCC80589.1 open 1065 [NA] 354 [AA] 3249370-3250434 lp_3633 transcription regulator, GntR family
3011 AL935263.2 CCC80590.1 open 2148 [NA] 715 [AA] 3250440-3252587 lp_3634 alpha-1,2-mannosidase
3012 AL935263.2 CCC80591.1 open 1137 [NA] 378 [AA] 3252834-3253970 lp_3635 ABC transporter, ATP-binding protein, mannose related oligosaccharides
3013 AL935263.2 CCC80592.1 open 864 [NA] 287 [AA] 3254221-3255084 lp_3637 fructokinase
3014 AL935263.2 CCC80593.1 open 1461 [NA] 486 [AA] 3255180-3256640 lp_3638 two-component system response regulator
3015 AL935263.2 CCC80594.1 open 1713 [NA] 570 [AA] 3256640-3258352 lp_3639 two-component system histidine protein kinase; sensor protein
3016 AL935263.2 CCC80595.1 open 612 [NA] 203 [AA] 3258353-3258964 lp_3640 hypothetical membrane protein, DUF624 family
3017 AL935263.2 CCC80596.1 open 1626 [NA] 541 [AA] 3259037-3260662 lp_3641 glucan 1,6-alpha-glucosidase
3018 AL935263.2 CCC80597.1 open 1473 [NA] 490 [AA] 3260765-3262237 lp_3642 ABC transporter, substrate binding protein,mannose-related oligosaccharides
3019 AL935263.2 CCC80598.1 open 918 [NA] 305 [AA] 3262327-3263244 lp_3643 ABC transporter, permease protein,mannose-related oligosaccharides
3020 AL935263.2 CCC80599.1 open 963 [NA] 320 [AA] 3263257-3264219 lp_3644 ABC transporter, permease protein,mannose-related oligosaccharides
3021 AL935263.2 CCC80600.1 open 1851 [NA] 616 [AA] 3264555-3266405 lp_3645 beta hexosamidase or lacto-N-biosidase or beta N-acetylglucosamidase
3022 AL935263.2 CCC80601.1 open 828 [NA] 275 [AA] 3266576-3267403 lp_3646 transcription regulator, AraC family
3023 AL935263.2 CCC80602.1 open 1749 [NA] 582 [AA] 3267532-3269280 lp_3647 ABC transporter, ATP-binding and permease protein
3024 AL935263.2 CCC80603.1 open 1791 [NA] 596 [AA] 3269282-3271072 lp_3648 ABC transporter, ATP-binding and permease protein
3025 AL935263.2 CCC80604.1 open 1050 [NA] 349 [AA] 3271302-3272351 lp_3649 transcription regulator, GntR family
3026 AL935263.2 CCC80605.1 open 867 [NA] 288 [AA] 3272383-3273249 lp_3650 regulator, Fis family
3027 AL935263.2 CCC80606.1 open 378 [NA] 125 [AA] 3273499-3273876 lp_3652 PTS system, glucitol/sorbitol-specific EIIA component
3028 AL935263.2 CCC80607.1 open 1020 [NA] 339 [AA] 3273904-3274923 lp_3653 PTS system, glucitol/sorbitol-specific EIIB component and second of two IIC components
3029 AL935263.2 CCC80608.1 open 552 [NA] 183 [AA] 3274947-3275498 lp_3654 PTS system, glucitol/sorbitol-specific EIIC component
3030 AL935263.2 CCC80609.1 open 507 [NA] 168 [AA] 3275503-3276009 lp_3655 sorbitol operon activator
3031 AL935263.2 CCC80610.1 open 1866 [NA] 621 [AA] 3276009-3277874 lp_3656 sorbitol operon transcription antiterminator,BglG family
3032 AL935263.2 CCC80611.1 open 804 [NA] 267 [AA] 3277908-3278711 lp_3657 sorbitol-6-phosphate 2-dehydrogenase
3033 AL935263.2 CCC80612.1 open 885 [NA] 294 [AA] 3279016-3279900 lp_3658 ribose transport protein
3034 AL935263.2 CCC80613.1 open 396 [NA] 131 [AA] 3279930-3280325 lp_3659 D-ribose mutarotase
3035 AL935263.2 CCC80614.1 open 921 [NA] 306 [AA] 3280328-3281248 lp_3660 ribokinase
3036 AL935263.2 CCC80615.1 open 999 [NA] 332 [AA] 3281352-3282350 lp_3661 transcription regulator, LacI family, ribose
3037 AL935263.2 CCC80616.1 open 2604 [NA] 867 [AA] 3282610-3285213 lp_3662 bifunctional protein: alcohol dehydrogenase; acetaldehyde dehydrogenase
3038 AL935263.2 CCC80617.1 open 462 [NA] 153 [AA] 3285502-3285963 lp_3663 nucleotide-binding protein, universal stress protein UspA family
3039 AL935263.2 CCC80618.1 open 546 [NA] 181 [AA] 3286154-3286699 lp_3664 transcriptional regulator of phenolic acid metabolism, PadR family
3040 AL935263.2 CCC80619.1 open 537 [NA] 178 [AA] 3286815-3287351 lp_3665 phenolic acid decarboxylase
3041 AL935263.2 CCC80620.1 open 801 [NA] 266 [AA] 3287513-3288313 lp_3666 aromatic compound hydratase/decarboxylase
3042 AL935263.2 CCC80621.1 open 483 [NA] 160 [AA] 3289085-3289567 lp_3668 acetyltransferase, GNAT family
3043 AL935263.2 CCC80622.1 open 867 [NA] 288 [AA] 3289725-3290591 lp_3669 DegV family protein
3044 AL935263.2 CCC80623.1 open 423 [NA] 140 [AA] 3290690-3291112 lp_3672 transcription regulator, Xre family
3045 AL935263.2 CCC80624.1 open 1317 [NA] 438 [AA] 3291125-3292441 lp_3673 aminopeptidase C
3046 AL935263.2 CCC80625.1 open 588 [NA] 195 [AA] 3292670-3293257 lp_3675 signal peptidase I
3047 AL935263.2 CCC80626.1 open 1539 [NA] 512 [AA] 3293466-3295004 lp_3676 cell surface protein precursor, CscC family
3048 AL935263.2 CCC80627.1 open 342 [NA] 113 [AA] 3295024-3295365 lp_3677 cell surface protein precursor, CscD family,LPXTG-motif cell wall anchor
3049 AL935263.2 CCC80628.1 open 1062 [NA] 353 [AA] 3295385-3296446 lp_3678 cell surface protein precursor, CscA/DUF916 family
3050 AL935263.2 CCC80629.1 open 738 [NA] 245 [AA] 3296593-3297330 lp_3679 cell surface protein precursor, CscB family
3051 AL935263.2 CCC80630.1 open 1911 [NA] 636 [AA] 3297586-3299496 lp_3681 cell division protein GidA
3052 AL935263.2 CCC80631.1 open 1392 [NA] 463 [AA] 3299515-3300906 lp_3682 GTPase and tRNA-U34 5-formylation enzyme
3053 AL935263.2 CCC80632.1 open 969 [NA] 322 [AA] 3301138-3302106 lp_3683 single stranded DNA-binding protein
3054 AL935263.2 CCC80633.1 open 1254 [NA] 417 [AA] 3302592-3303845 lp_3684 amidohydrolase family protein
3055 AL935263.2 CCC80634.1 open 1638 [NA] 545 [AA] 3303978-3305615 lp_3686 ABC transporter, substrate binding protein
3056 AL935263.2 CCC80635.1 open 834 [NA] 277 [AA] 3306330-3307163 lp_3687 preprotein translocase, YidC subunit
3057 AL935263.2 CCC80636.1 open 345 [NA] 114 [AA] 3307179-3307523 lp_3688 ribonuclease P
3058 AL935263.2 CCC80637.1 open 135 [NA] 44 [AA] 3307634-3307768 lp_3688a 50S ribosomal protein L34
3059 CR377164.1 CAG17825.1 open 960 [NA] 319 [AA] 163-1122 replication protein
3060 CR377164.1 CAG17826.1 open 147 [NA] 48 [AA] 1260-1406 hypothetical protein
3061 CR377164.1 CAG17827.1 open 183 [NA] 60 [AA] 1627-1809 hypothetical protein
3062 CR377165.1 CAG17828.1 open 660 [NA] 219 [AA] 102-761 replication protein
3063 CR377165.1 CAG17829.1 open 441 [NA] 146 [AA] 953-1393 hypothetical protein
3064 CR377165.1 CAG17830.1 open 204 [NA] 67 [AA] 1686-1889 hypothetical protein
3065 CR377165.1 CAG17831.1 open 159 [NA] 52 [AA] 2242-35 copy-number control protein
3066 CR377166.1 CAG17832.1 open 282 [NA] 93 [AA] 35839-51 DNA-damage-inducible gene
3067 CR377166.1 CAG17833.1 open 309 [NA] 102 [AA] 302-610 replication protein
3068 CR377166.1 CAG17834.1 open 333 [NA] 110 [AA] 925-1257 hypothetical protein
3069 CR377166.1 CAG17835.1 open 801 [NA] 266 [AA] 2061-2861 copy number control protein
3070 CR377166.1 CAG17836.1 open 351 [NA] 116 [AA] 2863-3213 hypothetical protein
3071 CR377166.1 CAG17837.1 open 243 [NA] 80 [AA] 3344-3586 hypothetical protein
3072 CR377166.1 CAG17838.1 open 555 [NA] 184 [AA] 3816-4370 putative resolvase
3073 CR377166.1 CAG17839.1 open 207 [NA] 68 [AA] 4649-4855 hypothetical protein
3074 CR377166.1 CAG17840.1 open 264 [NA] 87 [AA] 5378-5641 hypothetical protein
3075 CR377166.1 CAG17841.1 open 360 [NA] 119 [AA] 5713-6072 regulator of arsenical resistance
3076 CR377166.1 CAG17842.1 open 363 [NA] 120 [AA] 6059-6421 repressor of arsenical resistance
3077 CR377166.1 CAG17843.1 open 1731 [NA] 576 [AA] 6505-8235 arsenical pump-driving ATPase
3078 CR377166.1 CAG17844.1 open 1296 [NA] 431 [AA] 8294-9589 arsenical pump membrane protein
3079 CR377166.1 CAG17845.1 open 330 [NA] 109 [AA] 9606-9935 hypothetical protein
3080 CR377166.1 CAG17846.1 open 300 [NA] 99 [AA] 9958-10257 repressor of arsenical resistance
3081 CR377166.1 CAG17847.1 open 1401 [NA] 466 [AA] 10281-11681 NADH oxidase (putative)
3082 CR377166.1 CAG17848.1 open 369 [NA] 122 [AA] 12031-12399 putative positive regulator of cadmium resistance
3083 CR377166.1 CAG17849.1 open 615 [NA] 204 [AA] 12401-13015 putative cadmium resistance gene
3084 CR377166.1 CAG17850.1 open 1035 [NA] 344 [AA] 13100-14134 putative transposase
3085 CR377166.1 CAG17851.1 open 160 [NA] 53 [AA] <14245-14404 hypothetical protein
3086 CR377166.1 CAG17852.1 open 216 [NA] 71 [AA] 14408-14623 hypothetical protein
3087 CR377166.1 CAG17853.1 open 2136 [NA] 711 [AA] 14746-16881 DNA topoisomerase
3088 CR377166.1 CAG17854.1 open 411 [NA] 136 [AA] 16888-17298 hypothetical protein
3089 CR377166.1 CAG17855.1 open 858 [NA] 285 [AA] 17313-18170 conjugation protein
3090 CR377166.1 CAG17856.1 open 375 [NA] 124 [AA] 18176-18550 hypothetical protein
3091 CR377166.1 CAG17857.1 open 1512 [NA] 503 [AA] 18565-20076 conjugation protein
3092 CR377166.1 CAG17858.1 open 471 [NA] 156 [AA] 20078-20548 conjugation protein
3093 CR377166.1 CAG17859.1 open 369 [NA] 122 [AA] 20549-20917 hypothetical protein
3094 CR377166.1 CAG17860.1 open 618 [NA] 205 [AA] 20904-21521 hypothetical protein
3095 CR377166.1 CAG17861.1 open 1155 [NA] 384 [AA] 21536-22690 hypothetical protein
3096 CR377166.1 CAG17862.1 open 1419 [NA] 472 [AA] 22691-24109 conjugation protein
3097 CR377166.1 CAG17863.1 open 2019 [NA] 672 [AA] 24102-26120 conjugation protein
3098 CR377166.1 CAG17864.1 open 660 [NA] 219 [AA] 26132-26791 conjugation protein
3099 CR377166.1 CAG17865.1 open 363 [NA] 120 [AA] 26760-27122 conjugation protein
3100 CR377166.1 CAG17866.1 open 336 [NA] 111 [AA] 27143-27478 conjugation protein
3101 CR377166.1 CAG17867.1 open 615 [NA] 204 [AA] 27480-28094 hypothetical protein
3102 CR377166.1 CAG17868.1 open 339 [NA] 112 [AA] 28133-28471 hypothetical protein
3103 CR377166.1 CAG17869.1 open 2061 [NA] 686 [AA] 28524-30584 nickase
3104 CR377166.1 CAG17870.1 open 210 [NA] 69 [AA] 30856-31065 hypothetical protein
3105 CR377166.1 CAG17871.1 open 279 [NA] 92 [AA] 31088-31366 hypothetical protein
3106 CR377166.1 CAG17872.1 open 315 [NA] 104 [AA] 31356-31670 hypothetical protein
3107 CR377166.1 CAG17873.1 open 587 [NA] 195 [AA] <31880->32466 putative resolvase
3108 CR377166.1 CAG17874.1 open 2994 [NA] 997 [AA] 32645-35638 putative transposase