Genome Explorer: Lacticaseibacillus rhamnosus 3189-SD0197 (SEQF5798.1)
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NCBI Annotation for SEQF5798.1
| Genome selected: Lacticaseibacillus rhamnosus 3189-SD0197 | |||
| Contigs: | 64 | Bases: | 2886283 bps |
| CDS: | 55 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 54 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2501 | JAFIIS010000042.1 | MCI9810204.1 | open | 1029 [NA] | 342 [AA] | 6700-7728 | JYI81_12885 | glycosyltransferase family 4 protein |
| 2502 | JAFIIS010000042.1 | MCI9810205.1 | open | 1209 [NA] | 402 [AA] | 7731-8939 | JYI81_12890 | glycosyltransferase family 4 protein |
| 2503 | JAFIIS010000042.1 | MCI9810206.1 | open | 1650 [NA] | 549 [AA] | 9187-10836 | JYI81_12895 | APC family permease |
| 2504 | JAFIIS010000042.1 | MCI9810207.1 | open | 540 [NA] | 179 [AA] | 11284-11823 | JYI81_12900 | sigma-70 family RNA polymerase sigma factor |
| 2505 | JAFIIS010000043.1 | MCI9810208.1 | open | 306 [NA] | 101 [AA] | 264-569 | JYI81_13025 | hypothetical protein |
| 2506 | JAFIIS010000043.1 | MCI9810209.1 | open | 327 [NA] | 108 [AA] | 931-1257 | JYI81_13030 | hypothetical protein |
| 2507 | JAFIIS010000043.1 | MCI9810210.1 | open | 1188 [NA] | 395 [AA] | 1463-2650 | JYI81_13035 | recombinase RecA |
| 2508 | JAFIIS010000043.1 | MCI9810211.1 | open | 702 [NA] | 233 [AA] | 2899-3600 | JYI81_13040 | DUF554 domain-containing protein |
| 2509 | JAFIIS010000043.1 | MCI9810212.1 | open | 474 [NA] | 157 [AA] | 3663-4136 | JYI81_13045 | hypothetical protein |
| 2510 | JAFIIS010000043.1 | MCI9810213.1 | open | 1983 [NA] | 660 [AA] | 4978-6960 | JYI81_13050 | PTS sugar transporter subunit IIA |
| 2511 | JAFIIS010000043.1 | MCI9810214.1 | open | 930 [NA] | 309 [AA] | 6964-7893 | JYI81_13055 | 1-phosphofructokinase |
| 2512 | JAFIIS010000043.1 | MCI9810215.1 | open | 753 [NA] | 250 [AA] | 8042-8794 | JYI81_13060 | MurR/RpiR family transcriptional regulator |
| 2513 | JAFIIS010000043.1 | MCI9810216.1 | open | 1533 [NA] | 510 [AA] | 8856-10388 | JYI81_13065 | glycerol kinase GlpK |
| 2514 | JAFIIS010000043.1 | MCI9810217.1 | open | 120 [NA] | 39 [AA] | 10674-10793 | JYI81_13070 | holin |
| 2515 | JAFIIS010000044.1 | MCI9810218.1 | open | 879 [NA] | 292 [AA] | 158-1036 | JYI81_13075 | proline iminopeptidase-family hydrolase |
| 2516 | JAFIIS010000044.1 | MCI9810219.1 | open | 1983 [NA] | 660 [AA] | 1330-3312 | JYI81_13080 | methionine--tRNA ligase |
| 2517 | JAFIIS010000044.1 | MCI9810220.1 | open | 447 [NA] | 148 [AA] | 3371-3817 | JYI81_13085 | hypothetical protein |
| 2518 | JAFIIS010000044.1 | MCI9810221.1 | open | 213 [NA] | 70 [AA] | 3868-4080 | JYI81_13090 | helix-turn-helix transcriptional regulator |
| 2519 | JAFIIS010000044.1 | MCI9810222.1 | open | 1914 [NA] | 637 [AA] | 4244-6157 | JYI81_13095 | ABC transporter ATP-binding protein |
| 2520 | JAFIIS010000044.1 | MCI9810223.1 | open | 1827 [NA] | 608 [AA] | 6144-7970 | JYI81_13100 | ABC transporter ATP-binding protein |
| 2521 | JAFIIS010000044.1 | MCI9810224.1 | open | 912 [NA] | 303 [AA] | 8024-8935 | JYI81_13105 | sensor histidine kinase |
| 2522 | JAFIIS010000044.1 | MCI9810225.1 | open | 705 [NA] | 234 [AA] | 8922-9626 | JYI81_13110 | response regulator transcription factor |
| 2523 | JAFIIS010000044.1 | MCI9810226.1 | open | 882 [NA] | 293 [AA] | 9762-10643 | JYI81_13115 | aldose 1-epimerase family protein |
| 2524 | JAFIIS010000045.1 | MCI9810227.1 | open | 903 [NA] | 300 [AA] | 1132-2034 | JYI81_13130 | alpha/beta hydrolase |
| 2525 | JAFIIS010000045.1 | MCI9810228.1 | open | 324 [NA] | 107 [AA] | 2154-2477 | JYI81_13135 | MazG-like family protein |
| 2526 | JAFIIS010000045.1 | MCI9810229.1 | open | 720 [NA] | 239 [AA] | 2643-3362 | JYI81_13140 | ABC transporter ATP-binding protein |
| 2527 | JAFIIS010000045.1 | MCI9810230.1 | open | 786 [NA] | 261 [AA] | 3355-4140 | JYI81_13145 | ABC transporter ATP-binding protein |
| 2528 | JAFIIS010000045.1 | MCI9810231.1 | open | 951 [NA] | 316 [AA] | 4137-5087 | JYI81_13150 | branched-chain amino acid ABC transporter permease |
| 2529 | JAFIIS010000045.1 | MCI9810232.1 | open | 879 [NA] | 292 [AA] | 5092-5970 | JYI81_13155 | branched-chain amino acid ABC transporter permease |
| 2530 | JAFIIS010000045.1 | MCI9810233.1 | open | 1194 [NA] | 397 [AA] | 6007-7200 | JYI81_13160 | ABC transporter substrate-binding protein |
| 2531 | JAFIIS010000045.1 | MCI9810234.1 | open | 459 [NA] | 152 [AA] | 7888-8346 | JYI81_13165 | threonine/serine exporter family protein |
| 2532 | JAFIIS010000045.1 | MCI9810235.1 | open | 777 [NA] | 258 [AA] | 8364-9140 | JYI81_13170 | threonine/serine exporter family protein |
| 2533 | JAFIIS010000045.1 | MCI9810236.1 | open | 321 [NA] | 106 [AA] | 9137-9457 | JYI81_13175 | thioredoxin family protein |
| 2534 | JAFIIS010000046.1 | MCI9810237.1 | open | 981 [NA] | 326 [AA] | 1677-2657 | JYI81_13185 | phosphatase PAP2 family protein |
| 2535 | JAFIIS010000046.1 | MCI9810238.1 | open | 1077 [NA] | 358 [AA] | 2758-3834 | JYI81_13190 | LD-carboxypeptidase |
| 2536 | JAFIIS010000046.1 | MCI9810239.1 | open | 252 [NA] | 83 [AA] | 4091-4342 | JYI81_13195 | hypothetical protein |
| 2537 | JAFIIS010000046.1 | MCI9810240.1 | open | 1083 [NA] | 360 [AA] | 4472-5554 | JYI81_13200 | D-alanine--D-alanine ligase |
| 2538 | JAFIIS010000046.1 | MCI9810241.1 | open | 267 [NA] | 88 [AA] | 5844-6110 | JYI81_13205 | hypothetical protein |
| 2539 | JAFIIS010000046.1 | MCI9810242.1 | open | 645 [NA] | 214 [AA] | 6540-7184 | JYI81_13210 | hypothetical protein |
| 2540 | JAFIIS010000046.1 | MCI9810243.1 | open | 1392 [NA] | 463 [AA] | 7202-8593 | JYI81_13215 | DHA2 family efflux MFS transporter permease subunit |
| 2541 | JAFIIS010000047.1 | MCI9810244.1 | open | 204 [NA] | 67 [AA] | 126-329 | JYI81_13220 | hypothetical protein |
| 2542 | JAFIIS010000047.1 | MCI9810245.1 | open | 1254 [NA] | 417 [AA] | 366-1619 | JYI81_13225 | SH3-like domain-containing protein |
| 2543 | JAFIIS010000047.1 | MCI9810246.1 | open | 450 [NA] | 149 [AA] | 1638-2087 | JYI81_13230 | SH3-like domain-containing protein |
| 2544 | JAFIIS010000047.1 | MCI9810247.1 | open | 873 [NA] | 290 [AA] | 2454-3326 | JYI81_13235 | glucose-1-phosphate thymidylyltransferase RfbA |
| 2545 | JAFIIS010000047.1 | MCI9810248.1 | open | 573 [NA] | 190 [AA] | 3340-3912 | JYI81_13240 | dTDP-4-dehydrorhamnose 3,5-epimerase |
| 2546 | JAFIIS010000047.1 | MCI9810249.1 | open | 1026 [NA] | 341 [AA] | 3915-4940 | JYI81_13245 | dTDP-glucose 4,6-dehydratase |
| 2547 | JAFIIS010000047.1 | MCI9810250.1 | open | 843 [NA] | 280 [AA] | 5000-5842 | JYI81_13250 | dTDP-4-dehydrorhamnose reductase |
| 2548 | JAFIIS010000047.1 | MCI9810251.1 | open | 516 [NA] | 171 [AA] | 6107-6622 | JYI81_13255 | hypothetical protein |
| 2549 | JAFIIS010000047.1 | MCI9810252.1 | open | 1377 [NA] | 458 [AA] | 6619-7995 | JYI81_13260 | hypothetical protein |
| 2550 | JAFIIS010000048.1 | MCI9810253.1 | open | 633 [NA] | 210 [AA] | 410-1042 | JYI81_13270 | hypothetical protein |
| 2551 | JAFIIS010000048.1 | MCI9810254.1 | open | 1362 [NA] | 453 [AA] | 1053-2414 | JYI81_13275 | FAD-dependent oxidoreductase |
| 2552 | JAFIIS010000048.1 | MCI9810255.1 | open | 1839 [NA] | 612 [AA] | 2562-4400 | JYI81_13280 | FAD/NAD(P)-binding protein |
| 2553 | JAFIIS010000048.1 | MCI9810256.1 | open | 906 [NA] | 301 [AA] | 4566-5471 | JYI81_13285 | helix-turn-helix domain-containing protein |
| 2554 | JAFIIS010000048.1 | MCI9810257.1 | open | 1581 [NA] | 526 [AA] | 5599-7179 | JYI81_13290 | ABC transporter ATP-binding protein |
| 2555 | JAFIIS010000048.1 | MCI9810258.1 | open | 1134 [NA] | 377 [AA] | 7271-8404 | JYI81_13295 | hypothetical protein |
| 2556 | JAFIIS010000049.1 | MCI9810259.1 | open | 486 [NA] | 161 [AA] | 484-969 | JYI81_13300 | PTS glucose transporter subunit IIA |
| 2557 | JAFIIS010000049.1 | MCI9810260.1 | open | 744 [NA] | 247 [AA] | 1038-1781 | JYI81_13305 | MurR/RpiR family transcriptional regulator |
| 2558 | JAFIIS010000049.1 | MCI9810261.1 | open | 195 [NA] | 64 [AA] | 1863-2057 | JYI81_13310 | hypothetical protein |
| 2559 | JAFIIS010000049.1 | MCI9810262.1 | open | 1605 [NA] | 534 [AA] | 2273-3877 | JYI81_13315 | PTS transporter subunit EIIC |
| 2560 | JAFIIS010000049.1 | MCI9810263.1 | open | 1386 [NA] | 461 [AA] | 3889-5274 | JYI81_13320 | 6-phospho-alpha-glucosidase |
| 2561 | JAFIIS010000049.1 | MCI9810264.1 | open | 300 [NA] | 99 [AA] | 5576-5875 | JYI81_13325 | hypothetical protein |
| 2562 | JAFIIS010000049.1 | MCI9810265.1 | open | 690 [NA] | 229 [AA] | 6141-6830 | JYI81_13330 | ribose-5-phosphate isomerase RpiA |
| 2563 | JAFIIS010000050.1 | MCI9810266.1 | open | 1239 [NA] | 412 [AA] | 912-2150 | JYI81_13340 | ATP-binding protein |
| 2564 | JAFIIS010000050.1 | MCI9810267.1 | open | 870 [NA] | 289 [AA] | 2153-3022 | JYI81_13345 | hypothetical protein |
| 2565 | JAFIIS010000050.1 | MCI9810268.1 | open | 360 [NA] | 119 [AA] | 3176-3535 | JYI81_13350 | type II toxin-antitoxin system RelE/ParE family toxin |
| 2566 | JAFIIS010000050.1 | MCI9810269.1 | open | 279 [NA] | 92 [AA] | 3537-3815 | JYI81_13355 | helix-turn-helix domain-containing protein |
| 2567 | JAFIIS010000050.1 | MCI9810270.1 | open | 183 [NA] | 60 [AA] | 3936-4118 | JYI81_13360 | hypothetical protein |
| 2568 | JAFIIS010000050.1 | MCI9810271.1 | open | 684 [NA] | 227 [AA] | 4133-4816 | JYI81_13365 | IS6 family transposase |
| 2569 | JAFIIS010000050.1 | MCI9810272.1 | open | 468 [NA] | 155 [AA] | 4937-5404 | JYI81_13370 | DNA starvation/stationary phase protection protein |
| 2570 | JAFIIS010000050.1 | MCI9810273.1 | open | 744 [NA] | 247 [AA] | 5651-6394 | JYI81_13375 | ABC transporter ATP-binding protein |
| 2571 | JAFIIS010000051.1 | MCI9810274.1 | open | 273 [NA] | 90 [AA] | 353-625 | JYI81_13390 | hypothetical protein |
| 2572 | JAFIIS010000051.1 | MCI9810275.1 | open | 2805 [NA] | 934 [AA] | 685-3489 | JYI81_13395 | cation-transporting P-type ATPase |
| 2573 | JAFIIS010000051.1 | MCI9810276.1 | open | 684 [NA] | 227 [AA] | 4031-4714 | JYI81_13400 | IS6 family transposase |
| 2574 | JAFIIS010000051.1 | MCI9810277.1 | open | 1155 [NA] | 384 [AA] | 5189-6343 | JYI81_13405 | cation:proton antiporter |
| 2575 | JAFIIS010000051.1 | MCI9810278.1 | open | 141 [NA] | 46 [AA] | 6352->6493 | JYI81_13410 | transposase |
| 2576 | JAFIIS010000052.1 | MCI9810279.1 | open | 240 [NA] | 79 [AA] | 1727-1966 | JYI81_13420 | bacterial Ig-like domain-containing protein |
| 2577 | JAFIIS010000052.1 | MCI9810280.1 | open | 2742 [NA] | 913 [AA] | 1972-4713 | JYI81_13425 | KxYKxGKxW signal peptide domain-containing protein |
| 2578 | JAFIIS010000052.1 | MCI9810281.1 | open | 1341 [NA] | 446 [AA] | 5054->6395 | JYI81_13430 | LPXTG cell wall anchor domain-containing protein |
| 2579 | JAFIIS010000053.1 | MCI9810282.1 | open | 672 [NA] | 223 [AA] | 1005-1676 | JYI81_13440 | TetR/AcrR family transcriptional regulator |
| 2580 | JAFIIS010000053.1 | MCI9810283.1 | open | 1899 [NA] | 632 [AA] | 1882-3780 | JYI81_13445 | heavy metal translocating P-type ATPase |
| 2581 | JAFIIS010000053.1 | MCI9810284.1 | open | 222 [NA] | 73 [AA] | 3822-4043 | JYI81_13450 | heavy-metal-associated domain-containing protein |
| 2582 | JAFIIS010000053.1 | MCI9810285.1 | open | 549 [NA] | 182 [AA] | 4053-4601 | JYI81_13455 | DNA starvation/stationary phase protection protein |
| 2583 | JAFIIS010000054.1 | MCI9810286.1 | open | 705 [NA] | 234 [AA] | 199-903 | JYI81_13460 | hypothetical protein |
| 2584 | JAFIIS010000054.1 | MCI9810287.1 | open | 735 [NA] | 244 [AA] | 910-1644 | JYI81_13465 | PTS mannose transporter subunit IID |
| 2585 | JAFIIS010000054.1 | MCI9810288.1 | open | 669 [NA] | 222 [AA] | 1625-2293 | JYI81_13470 | ATP-binding cassette domain-containing protein |
| 2586 | JAFIIS010000054.1 | MCI9810289.1 | open | 477 [NA] | 158 [AA] | 2293-2769 | JYI81_13475 | hypothetical protein |
| 2587 | JAFIIS010000054.1 | MCI9810290.1 | open | 468 [NA] | 155 [AA] | 2823-3290 | JYI81_13480 | NUDIX domain-containing protein |
| 2588 | JAFIIS010000056.1 | MCI9810291.1 | open | 132 [NA] | 43 [AA] | 242-373 | JYI81_13490 | alpha-galactosidase |
| 2589 | JAFIIS010000056.1 | MCI9810292.1 | open | 609 [NA] | 202 [AA] | 728-1336 | JYI81_13500 | helix-turn-helix domain-containing protein |
| 2590 | JAFIIS010000056.1 | MCI9810293.1 | open | 267 [NA] | 88 [AA] | 1354-1620 | JYI81_13505 | hypothetical protein |
| 2591 | JAFIIS010000057.1 | MCI9810294.1 | open | 1827 [NA] | 608 [AA] | 299-2125 | JYI81_13510 | cadmium-translocating P-type ATPase |
| 2592 | JAFIIS010000058.1 | MCI9810295.1 | open | 909 [NA] | 302 [AA] | 782-1690 | JYI81_13520 | ABC transporter ATP-binding protein |
| 2593 | JAFIIS010000059.1 | MCI9810296.1 | open | 678 [NA] | 225 [AA] | 437-1114 | JYI81_13525 | CPBP family intramembrane metalloprotease |
| 2594 | JAFIIS010000061.1 | MCI9810297.1 | open | 1263 [NA] | 420 [AA] | 86-1348 | JYI81_13535 | restriction endonuclease subunit S |
| 2595 | JAFIIS010000062.1 | MCI9810298.1 | open | 1404 [NA] | 467 [AA] | 114-1517 | JYI81_13545 | ISLre2-like element ISLrh4 family transposase |
| 2596 | JAFIIS010000063.1 | MCI9810299.1 | open | 1410 [NA] | 470 [AA] | 71->1480 | JYI81_13550 | IS5-like element ISLrh2 family transposase |