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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Helicobacter pylori ATCC 43504 (SEQF10109.1)
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PROKKA Annotation for SEQF10109.1
Genome selected: Helicobacter pylori ATCC 43504
Contigs:1 Bases:1680829 bps
CDS:1609 rRNA:4
tmRNA:1 tRNA:36
Annotation Table [page:4]
Number of Records Found: 1609 [4 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
1501 SEQF10109.1_AP017632.1 SEQF10109.1_01556 open 1029 [NA] 342 [AA] 1563872-1564900 flgI Flagellar P-ring protein
1502 SEQF10109.1_AP017632.1 SEQF10109.1_01557 open 318 [NA] 105 [AA] 1564897-1565214 hypothetical protein
1503 SEQF10109.1_AP017632.1 SEQF10109.1_01558 open 1146 [NA] 381 [AA] 1565211-1566356 hypothetical protein
1504 SEQF10109.1_AP017632.1 SEQF10109.1_01559 open 435 [NA] 144 [AA] 1566562-1566996 dps DNA protection during starvation protein
1505 SEQF10109.1_AP017632.1 SEQF10109.1_01560 open 285 [NA] 94 [AA] 1567017-1567301 hypothetical protein
1506 SEQF10109.1_AP017632.1 SEQF10109.1_01561 open 396 [NA] 131 [AA] 1567294-1567689 hypothetical protein
1507 SEQF10109.1_AP017632.1 SEQF10109.1_01562 open 924 [NA] 307 [AA] 1567699-1568622 ispB Octaprenyl diphosphate synthase
1508 SEQF10109.1_AP017632.1 SEQF10109.1_01563 open 1350 [NA] 449 [AA] 1568622-1569971 hemA Glutamyl-tRNA reductase
1509 SEQF10109.1_AP017632.1 SEQF10109.1_01564 open 1734 [NA] 577 [AA] 1569975-1571708 proS Proline--tRNA ligase
1510 SEQF10109.1_AP017632.1 SEQF10109.1_01565 open 921 [NA] 306 [AA] 1571719-1572639 hemC Porphobilinogen deaminase
1511 SEQF10109.1_AP017632.1 SEQF10109.1_01566 open 372 [NA] 123 [AA] 1572639-1573010 hypothetical protein
1512 SEQF10109.1_AP017632.1 SEQF10109.1_01567 open 1062 [NA] 353 [AA] 1573103-1574164 hypothetical protein
1513 SEQF10109.1_AP017632.1 SEQF10109.1_01568 open 519 [NA] 172 [AA] 1574889-1575407 hypothetical protein
1514 SEQF10109.1_AP017632.1 SEQF10109.1_01569 open 1173 [NA] 390 [AA] 1575419-1576591 ygiC Putative acid--amine ligase YgiC
1515 SEQF10109.1_AP017632.1 SEQF10109.1_01570 open 648 [NA] 215 [AA] 1576613-1577260 hypothetical protein
1516 SEQF10109.1_AP017632.1 SEQF10109.1_01571 open 798 [NA] 265 [AA] 1577276-1578073 hypothetical protein
1517 SEQF10109.1_AP017632.1 SEQF10109.1_01572 open 732 [NA] 243 [AA] 1578186-1578917 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase
1518 SEQF10109.1_AP017632.1 SEQF10109.1_01573 open 1449 [NA] 482 [AA] 1579112-1580560 hypothetical protein
1519 SEQF10109.1_AP017632.1 SEQF10109.1_01575 open 1158 [NA] 385 [AA] 1580797-1581954 dauA C4-dicarboxylic acid transporter DauA
1520 SEQF10109.1_AP017632.1 SEQF10109.1_01576 open 2160 [NA] 719 [AA] 1582131-1584290 hypothetical protein
1521 SEQF10109.1_AP017632.1 SEQF10109.1_01577 open 729 [NA] 242 [AA] 1584430-1585158 hypothetical protein
1522 SEQF10109.1_AP017632.1 SEQF10109.1_01578 open 957 [NA] 318 [AA] 1585165-1586121 corA Magnesium transport protein CorA
1523 SEQF10109.1_AP017632.1 SEQF10109.1_01579 open 1209 [NA] 402 [AA] 1586137-1587345 pgk Phosphoglycerate kinase
1524 SEQF10109.1_AP017632.1 SEQF10109.1_01580 open 993 [NA] 330 [AA] 1587361-1588353 gapB Glyceraldehyde-3-phosphate dehydrogenase 2
1525 SEQF10109.1_AP017632.1 SEQF10109.1_01581 open 702 [NA] 233 [AA] 1588442-1589143 ung Uracil-DNA glycosylase
1526 SEQF10109.1_AP017632.1 SEQF10109.1_01582 open 717 [NA] 238 [AA] 1589140-1589856 hypothetical protein
1527 SEQF10109.1_AP017632.1 SEQF10109.1_01583 open 1116 [NA] 371 [AA] 1589843-1590958 hypothetical protein
1528 SEQF10109.1_AP017632.1 SEQF10109.1_01584 open 1365 [NA] 454 [AA] 1591021-1592385 hypothetical protein
1529 SEQF10109.1_AP017632.1 SEQF10109.1_01585 open 3315 [NA] 1104 [AA] 1592780-1596094 hypothetical protein
1530 SEQF10109.1_AP017632.1 SEQF10109.1_01586 open 822 [NA] 273 [AA] 1596119-1596940 nadC putative nicotinate-nucleotide pyrophosphorylase [carboxylating]
1531 SEQF10109.1_AP017632.1 SEQF10109.1_01587 open 1011 [NA] 336 [AA] 1596940-1597950 nadA Quinolinate synthase A
1532 SEQF10109.1_AP017632.1 SEQF10109.1_01588 open 804 [NA] 267 [AA] 1597940-1598743 psd Phosphatidylserine decarboxylase proenzyme
1533 SEQF10109.1_AP017632.1 SEQF10109.1_01589 open 507 [NA] 168 [AA] 1598737-1599243 hypothetical protein
1534 SEQF10109.1_AP017632.1 SEQF10109.1_01590 open 495 [NA] 164 [AA] 1599256-1599750 hypothetical protein
1535 SEQF10109.1_AP017632.1 SEQF10109.1_01591 open 885 [NA] 294 [AA] 1599743-1600627 COQ2 4-hydroxybenzoate polyprenyltransferase%2C mitochondrial
1536 SEQF10109.1_AP017632.1 SEQF10109.1_01592 open 1314 [NA] 437 [AA] 1600656-1601969 hypothetical protein
1537 SEQF10109.1_AP017632.1 SEQF10109.1_01593 open 1467 [NA] 488 [AA] 1601966-1603432 dnaB Replicative DNA helicase
1538 SEQF10109.1_AP017632.1 SEQF10109.1_01594 open 1401 [NA] 466 [AA] 1603443-1604843 nnr Bifunctional NAD(P)H-hydrate repair enzyme Nnr
1539 SEQF10109.1_AP017632.1 SEQF10109.1_01595 open 1134 [NA] 377 [AA] 1604846-1605979 sasA Adaptive-response sensory-kinase SasA
1540 SEQF10109.1_AP017632.1 SEQF10109.1_01596 open 642 [NA] 213 [AA] 1606014-1606655 qseB Transcriptional regulatory protein QseB
1541 SEQF10109.1_AP017632.1 SEQF10109.1_01597 open 174 [NA] 57 [AA] 1606726-1606899 hypothetical protein
1542 SEQF10109.1_AP017632.1 SEQF10109.1_01598 open 2235 [NA] 744 [AA] 1606950-1609184 hypothetical protein
1543 SEQF10109.1_AP017632.1 SEQF10109.1_01599 open 2913 [NA] 970 [AA] 1609195-1612107 hypothetical protein
1544 SEQF10109.1_AP017632.1 SEQF10109.1_01600 open 747 [NA] 248 [AA] 1612158-1612904 hypothetical protein
1545 SEQF10109.1_AP017632.1 SEQF10109.1_01601 open 1044 [NA] 347 [AA] 1612908-1613951 mreB Cell shape-determining protein MreB
1546 SEQF10109.1_AP017632.1 SEQF10109.1_01602 open 1347 [NA] 448 [AA] 1613994-1615340 clpX ATP-dependent Clp protease ATP-binding subunit ClpX
1547 SEQF10109.1_AP017632.1 SEQF10109.1_01603 open 813 [NA] 270 [AA] 1615342-1616154 lpxA Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
1548 SEQF10109.1_AP017632.1 SEQF10109.1_01604 open 480 [NA] 159 [AA] 1616157-1616636 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
1549 SEQF10109.1_AP017632.1 SEQF10109.1_01605 open 390 [NA] 129 [AA] 1616818-1617207 fliW2 Flagellar assembly factor FliW 2
1550 SEQF10109.1_AP017632.1 SEQF10109.1_01606 open 138 [NA] 45 [AA] 1617424-1617561 hypothetical protein
1551 SEQF10109.1_AP017632.1 SEQF10109.1_01607 open 663 [NA] 220 [AA] 1617622-1618284 bamD Outer membrane protein assembly factor BamD
1552 SEQF10109.1_AP017632.1 SEQF10109.1_01608 open 2478 [NA] 825 [AA] 1618326-1620803 lon Lon protease
1553 SEQF10109.1_AP017632.1 SEQF10109.1_01609 open 828 [NA] 275 [AA] 1620813-1621640 tyrC Cyclohexadienyl dehydrogenase
1554 SEQF10109.1_AP017632.1 SEQF10109.1_01610 open 864 [NA] 287 [AA] 1621822-1622685 hypothetical protein
1555 SEQF10109.1_AP017632.1 SEQF10109.1_01611 open 1602 [NA] 533 [AA] 1622797-1624398 hypothetical protein
1556 SEQF10109.1_AP017632.1 SEQF10109.1_01612 open 153 [NA] 50 [AA] 1624364-1624516 hypothetical protein
1557 SEQF10109.1_AP017632.1 SEQF10109.1_01613 open 2343 [NA] 780 [AA] 1624510-1626852 hypothetical protein
1558 SEQF10109.1_AP017632.1 SEQF10109.1_01614 open 849 [NA] 282 [AA] 1627261-1628109 bioB Biotin synthase
1559 SEQF10109.1_AP017632.1 SEQF10109.1_01615 open 879 [NA] 292 [AA] 1628109-1628987 hypothetical protein
1560 SEQF10109.1_AP017632.1 SEQF10109.1_01617 open 483 [NA] 160 [AA] 1633814-1634296 hypothetical protein
1561 SEQF10109.1_AP017632.1 SEQF10109.1_01618 open 1800 [NA] 599 [AA] 1634307-1636106 hypothetical protein
1562 SEQF10109.1_AP017632.1 SEQF10109.1_01619 open 897 [NA] 298 [AA] 1636256-1637152 hypothetical protein
1563 SEQF10109.1_AP017632.1 SEQF10109.1_01620 open 447 [NA] 148 [AA] 1637265-1637711 queF NADPH-dependent 7-cyano-7-deazaguanine reductase
1564 SEQF10109.1_AP017632.1 SEQF10109.1_01621 open 342 [NA] 113 [AA] 1637771-1638112 rsfS Ribosomal silencing factor RsfS
1565 SEQF10109.1_AP017632.1 SEQF10109.1_01622 open 834 [NA] 277 [AA] 1638183-1639016 miaA tRNA dimethylallyltransferase
1566 SEQF10109.1_AP017632.1 SEQF10109.1_01623 open 1104 [NA] 367 [AA] 1639017-1640120 hypothetical protein
1567 SEQF10109.1_AP017632.1 SEQF10109.1_01624 open 804 [NA] 267 [AA] 1640130-1640933 hypothetical protein
1568 SEQF10109.1_AP017632.1 SEQF10109.1_01625 open 852 [NA] 283 [AA] 1640944-1641795 cptA Phosphoethanolamine transferase CptA
1569 SEQF10109.1_AP017632.1 SEQF10109.1_01626 open 780 [NA] 259 [AA] 1641855-1642634 murB UDP-N-acetylenolpyruvoylglucosamine reductase
1570 SEQF10109.1_AP017632.1 SEQF10109.1_01627 open 267 [NA] 88 [AA] 1642638-1642904 hypothetical protein
1571 SEQF10109.1_AP017632.1 SEQF10109.1_01628 open 1305 [NA] 434 [AA] 1642915-1644219 fliI Flagellum-specific ATP synthase
1572 SEQF10109.1_AP017632.1 SEQF10109.1_01629 open 915 [NA] 304 [AA] 1644220-1645134 ptlH Type IV secretion system protein PtlH
1573 SEQF10109.1_AP017632.1 SEQF10109.1_01630 open 2763 [NA] 920 [AA] 1645151-1647913 ileS Isoleucine--tRNA ligase
1574 SEQF10109.1_AP017632.1 SEQF10109.1_01631 open 255 [NA] 84 [AA] 1647938-1648192 putative protein
1575 SEQF10109.1_AP017632.1 SEQF10109.1_01632 open 621 [NA] 206 [AA] 1648294-1648914 hypothetical protein
1576 SEQF10109.1_AP017632.1 SEQF10109.1_01633 open 528 [NA] 175 [AA] 1649045-1649572 hypothetical protein
1577 SEQF10109.1_AP017632.1 SEQF10109.1_01634 open 258 [NA] 85 [AA] 1649821-1650078 hypothetical protein
1578 SEQF10109.1_AP017632.1 SEQF10109.1_01635 open 1074 [NA] 357 [AA] 1650284-1651357 rlmN putative dual-specificity RNA methyltransferase RlmN
1579 SEQF10109.1_AP017632.1 SEQF10109.1_01636 open 990 [NA] 329 [AA] 1651354-1652343 kdsD Arabinose 5-phosphate isomerase KdsD
1580 SEQF10109.1_AP017632.1 SEQF10109.1_01637 open 2079 [NA] 692 [AA] 1652327-1654405 rnj Ribonuclease J
1581 SEQF10109.1_AP017632.1 SEQF10109.1_01638 open 816 [NA] 271 [AA] 1654456-1655271 rsmA Ribosomal RNA small subunit methyltransferase A
1582 SEQF10109.1_AP017632.1 SEQF10109.1_01639 open 228 [NA] 75 [AA] 1655521-1655748 hypothetical protein
1583 SEQF10109.1_AP017632.1 SEQF10109.1_01640 open 495 [NA] 164 [AA] 1656552-1657046 hypothetical protein
1584 SEQF10109.1_AP017632.1 SEQF10109.1_01642 open 672 [NA] 223 [AA] 1657270-1657941 hypothetical protein
1585 SEQF10109.1_AP017632.1 SEQF10109.1_01643 open 882 [NA] 293 [AA] 1657983-1658864 purU Formyltetrahydrofolate deformylase
1586 SEQF10109.1_AP017632.1 SEQF10109.1_01644 open 879 [NA] 292 [AA] 1658867-1659745 hypothetical protein
1587 SEQF10109.1_AP017632.1 SEQF10109.1_01645 open 273 [NA] 90 [AA] 1659817-1660089 hypothetical protein
1588 SEQF10109.1_AP017632.1 SEQF10109.1_01646 open 729 [NA] 242 [AA] 1660332-1661060 hypothetical protein
1589 SEQF10109.1_AP017632.1 SEQF10109.1_01647 open 1107 [NA] 368 [AA] 1661112-1662218 hypothetical protein
1590 SEQF10109.1_AP017632.1 SEQF10109.1_01648 open 426 [NA] 141 [AA] 1662228-1662653 hypothetical protein
1591 SEQF10109.1_AP017632.1 SEQF10109.1_01650 open 723 [NA] 240 [AA] 1665040-1665762 hypothetical protein
1592 SEQF10109.1_AP017632.1 SEQF10109.1_01651 open 489 [NA] 162 [AA] 1665943-1666431 ppiB Peptidyl-prolyl cis-trans isomerase B
1593 SEQF10109.1_AP017632.1 SEQF10109.1_01652 open 231 [NA] 76 [AA] 1666449-1666679 csrA Translational regulator CsrA
1594 SEQF10109.1_AP017632.1 SEQF10109.1_01653 open 822 [NA] 273 [AA] 1666679-1667500 ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
1595 SEQF10109.1_AP017632.1 SEQF10109.1_01654 open 459 [NA] 152 [AA] 1667478-1667936 smpB SsrA-binding protein
1596 SEQF10109.1_AP017632.1 SEQF10109.1_01655 open 453 [NA] 150 [AA] 1667939-1668391 tolQ_2 Tol-Pal system protein TolQ
1597 SEQF10109.1_AP017632.1 SEQF10109.1_01656 open 402 [NA] 133 [AA] 1668402-1668803 tolR Tol-Pal system protein TolR
1598 SEQF10109.1_AP017632.1 SEQF10109.1_01657 open 486 [NA] 161 [AA] 1668969-1669454 rnpA Ribonuclease P protein component
1599 SEQF10109.1_AP017632.1 SEQF10109.1_01658 open 1647 [NA] 548 [AA] 1669800-1671446 yidC Membrane protein insertase YidC
1600 SEQF10109.1_AP017632.1 SEQF10109.1_01659 open 807 [NA] 268 [AA] 1671446-1672252 hypothetical protein
1601 SEQF10109.1_AP017632.1 SEQF10109.1_01660 open 1353 [NA] 450 [AA] 1672245-1673597 mnmE tRNA modification GTPase MnmE
1602 SEQF10109.1_AP017632.1 SEQF10109.1_01661 open 2241 [NA] 746 [AA] 1673798-1676038 hypothetical protein
1603 SEQF10109.1_AP017632.1 SEQF10109.1_01662 open 282 [NA] 93 [AA] 1676073-1676354 hypothetical protein
1604 SEQF10109.1_AP017632.1 SEQF10109.1_01663 open 270 [NA] 89 [AA] 1676543-1676812 hypothetical protein
1605 SEQF10109.1_AP017632.1 SEQF10109.1_01664 open 447 [NA] 148 [AA] 1676898-1677344 hypothetical protein
1606 SEQF10109.1_AP017632.1 SEQF10109.1_01665 open 627 [NA] 208 [AA] 1677411-1678037 thyX Flavin-dependent thymidylate synthase
1607 SEQF10109.1_AP017632.1 SEQF10109.1_01666 open 1794 [NA] 597 [AA] 1678059-1679852 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
1608 SEQF10109.1_AP017632.1 SEQF10109.1_01667 open 240 [NA] 79 [AA] 1679853-1680092 putative protein
1609 SEQF10109.1_AP017632.1 SEQF10109.1_01668 open 543 [NA] 180 [AA] 1680135-1680677 hypothetical protein