Genome Explorer: Agrobacterium tumefaciens 183 (SEQF8749.1)
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PROKKA Annotation for SEQF8749.1
| Genome selected: Agrobacterium tumefaciens 183 | |||
| Contigs: | 5 | Bases: | 5520201 bps |
| CDS: | 5125 | rRNA: | 10 |
| tmRNA: | 1 | tRNA: | 55 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5001 | SEQF8749.1_CP029048.1 | SEQF8749.1_05126 | open | 936 [NA] | 311 [AA] | 51254-52189 | oppF_8 | Oligopeptide transport ATP-binding protein OppF |
| 5002 | SEQF8749.1_CP029048.1 | SEQF8749.1_05127 | open | 927 [NA] | 308 [AA] | 52186-53112 | gsiC_17 | Glutathione transport system permease protein GsiC |
| 5003 | SEQF8749.1_CP029048.1 | SEQF8749.1_05128 | open | 861 [NA] | 286 [AA] | 53105-53965 | gsiD_8 | Glutathione transport system permease protein GsiD |
| 5004 | SEQF8749.1_CP029048.1 | SEQF8749.1_05129 | open | 801 [NA] | 266 [AA] | 53981-54781 | ugpQ_2 | Glycerophosphodiester phosphodiesterase%2C cytoplasmic |
| 5005 | SEQF8749.1_CP029048.1 | SEQF8749.1_05130 | open | 819 [NA] | 272 [AA] | 54774-55592 | cysQ_6 | 3(2)%2C5-bisphosphate nucleotidase CysQ |
| 5006 | SEQF8749.1_CP029048.1 | SEQF8749.1_05131 | open | 459 [NA] | 152 [AA] | 55592-56050 | hypothetical protein | |
| 5007 | SEQF8749.1_CP029048.1 | SEQF8749.1_05132 | open | 984 [NA] | 327 [AA] | 56071-57054 | hypothetical protein | |
| 5008 | SEQF8749.1_CP029048.1 | SEQF8749.1_05133 | open | 666 [NA] | 221 [AA] | 57051-57716 | hypothetical protein | |
| 5009 | SEQF8749.1_CP029048.1 | SEQF8749.1_05134 | open | 345 [NA] | 114 [AA] | 57846-58190 | hypothetical protein | |
| 5010 | SEQF8749.1_CP029048.1 | SEQF8749.1_05135 | open | 1260 [NA] | 419 [AA] | 58193-59452 | Cytochrome P450-pinF1%2C plant-inducible | |
| 5011 | SEQF8749.1_CP029048.1 | SEQF8749.1_05136 | open | 1176 [NA] | 391 [AA] | 59529-60704 | Cytochrome P450-pinF2%2C plant-inducible | |
| 5012 | SEQF8749.1_CP029048.1 | SEQF8749.1_05137 | open | 924 [NA] | 307 [AA] | 60980-61903 | IS110 family transposase ISSfr2 | |
| 5013 | SEQF8749.1_CP029048.1 | SEQF8749.1_05138 | open | 939 [NA] | 312 [AA] | 62799-63737 | hypothetical protein | |
| 5014 | SEQF8749.1_CP029048.1 | SEQF8749.1_05140 | open | 435 [NA] | 144 [AA] | 64638-65072 | hypothetical protein | |
| 5015 | SEQF8749.1_CP029048.1 | SEQF8749.1_05141 | open | 105 [NA] | 34 [AA] | 65169-65273 | hypothetical protein | |
| 5016 | SEQF8749.1_CP029048.1 | SEQF8749.1_05142 | open | 168 [NA] | 55 [AA] | 65471-65638 | hypothetical protein | |
| 5017 | SEQF8749.1_CP029048.1 | SEQF8749.1_05143 | open | 180 [NA] | 59 [AA] | 66374-66553 | hypothetical protein | |
| 5018 | SEQF8749.1_CP029048.1 | SEQF8749.1_05144 | open | 711 [NA] | 236 [AA] | 67716-68426 | hypothetical protein | |
| 5019 | SEQF8749.1_CP029048.1 | SEQF8749.1_05145 | open | 243 [NA] | 80 [AA] | 68889-69131 | hypothetical protein | |
| 5020 | SEQF8749.1_CP029048.1 | SEQF8749.1_05146 | open | 732 [NA] | 243 [AA] | 69571-70302 | tzs | Adenylate dimethylallyltransferase |
| 5021 | SEQF8749.1_CP029048.1 | SEQF8749.1_05147 | open | 2418 [NA] | 805 [AA] | 71223-73640 | virA | Wide host range VirA protein |
| 5022 | SEQF8749.1_CP029048.1 | SEQF8749.1_05148 | open | 738 [NA] | 245 [AA] | 74185-74922 | hypothetical protein | |
| 5023 | SEQF8749.1_CP029048.1 | SEQF8749.1_05149 | open | 366 [NA] | 121 [AA] | 74922-75287 | virB2 | Protein virB2 |
| 5024 | SEQF8749.1_CP029048.1 | SEQF8749.1_05150 | open | 327 [NA] | 108 [AA] | 75287-75613 | hypothetical protein | |
| 5025 | SEQF8749.1_CP029048.1 | SEQF8749.1_05151 | open | 2370 [NA] | 789 [AA] | 75613-77982 | virB4_3 | Protein virB4 |
| 5026 | SEQF8749.1_CP029048.1 | SEQF8749.1_05152 | open | 663 [NA] | 220 [AA] | 77999-78661 | virB5_2 | Protein virB5 |
| 5027 | SEQF8749.1_CP029048.1 | SEQF8749.1_05153 | open | 888 [NA] | 295 [AA] | 78762-79649 | hypothetical protein | |
| 5028 | SEQF8749.1_CP029048.1 | SEQF8749.1_05154 | open | 714 [NA] | 237 [AA] | 79839-80552 | virB8_2 | Protein virB8 |
| 5029 | SEQF8749.1_CP029048.1 | SEQF8749.1_05155 | open | 882 [NA] | 293 [AA] | 80549-81430 | virB9_2 | Protein virB9 |
| 5030 | SEQF8749.1_CP029048.1 | SEQF8749.1_05157 | open | 1134 [NA] | 377 [AA] | 81427-82560 | Protein virB10 | |
| 5031 | SEQF8749.1_CP029048.1 | SEQF8749.1_05158 | open | 1035 [NA] | 344 [AA] | 82601-83635 | Type IV secretion system protein VirB11 | |
| 5032 | SEQF8749.1_CP029048.1 | SEQF8749.1_05159 | open | 762 [NA] | 253 [AA] | 83854-84615 | ompR_6 | Transcriptional regulatory protein OmpR |
| 5033 | SEQF8749.1_CP029048.1 | SEQF8749.1_05161 | open | 609 [NA] | 202 [AA] | 84757-85365 | virC2 | Protein virC2 |
| 5034 | SEQF8749.1_CP029048.1 | SEQF8749.1_05162 | open | 696 [NA] | 231 [AA] | 85368-86063 | virC1 | Protein virC1 |
| 5035 | SEQF8749.1_CP029048.1 | SEQF8749.1_05163 | open | 444 [NA] | 147 [AA] | 86334-86777 | virD1 | T-DNA border endonuclease VirD1 |
| 5036 | SEQF8749.1_CP029048.1 | SEQF8749.1_05164 | open | 1344 [NA] | 447 [AA] | 86811-88154 | virD2 | T-DNA border endonuclease VirD2 |
| 5037 | SEQF8749.1_CP029048.1 | SEQF8749.1_05165 | open | 2022 [NA] | 673 [AA] | 88169-90190 | hypothetical protein | |
| 5038 | SEQF8749.1_CP029048.1 | SEQF8749.1_05166 | open | 2007 [NA] | 668 [AA] | 90264-92270 | virD4 | Protein VirD4 |
| 5039 | SEQF8749.1_CP029048.1 | SEQF8749.1_05167 | open | 2526 [NA] | 841 [AA] | 92382-94907 | hypothetical protein | |
| 5040 | SEQF8749.1_CP029048.1 | SEQF8749.1_05168 | open | 192 [NA] | 63 [AA] | 96362-96553 | virE1 | Protein virE1 |
| 5041 | SEQF8749.1_CP029048.1 | SEQF8749.1_05169 | open | 1671 [NA] | 556 [AA] | 96567-98237 | virE2 | Single-strand DNA-binding protein |
| 5042 | SEQF8749.1_CP029048.1 | SEQF8749.1_05170 | open | 2055 [NA] | 684 [AA] | 98304-100358 | hypothetical protein | |
| 5043 | SEQF8749.1_CP029048.1 | SEQF8749.1_05171 | open | 273 [NA] | 90 [AA] | 100845-101117 | hypothetical protein | |
| 5044 | SEQF8749.1_CP029048.1 | SEQF8749.1_05172 | open | 372 [NA] | 123 [AA] | 101179-101550 | hypothetical protein | |
| 5045 | SEQF8749.1_CP029048.1 | SEQF8749.1_05173 | open | 519 [NA] | 172 [AA] | 101526-102044 | hypothetical protein | |
| 5046 | SEQF8749.1_CP029048.1 | SEQF8749.1_05174 | open | 333 [NA] | 110 [AA] | 102283-102615 | hypothetical protein | |
| 5047 | SEQF8749.1_CP029048.1 | SEQF8749.1_05175 | open | 777 [NA] | 258 [AA] | 103013-103789 | cysQ_7 | 3(2)%2C5-bisphosphate nucleotidase CysQ |
| 5048 | SEQF8749.1_CP029048.1 | SEQF8749.1_05176 | open | 285 [NA] | 94 [AA] | 103782-104066 | hypothetical protein | |
| 5049 | SEQF8749.1_CP029048.1 | SEQF8749.1_05177 | open | 1617 [NA] | 538 [AA] | 104957-106573 | hypothetical protein | |
| 5050 | SEQF8749.1_CP029048.1 | SEQF8749.1_05178 | open | 243 [NA] | 80 [AA] | 108064-108306 | hypothetical protein | |
| 5051 | SEQF8749.1_CP029048.1 | SEQF8749.1_05179 | open | 696 [NA] | 231 [AA] | 109012-109707 | hypothetical protein | |
| 5052 | SEQF8749.1_CP029048.1 | SEQF8749.1_05180 | open | 879 [NA] | 292 [AA] | 110252-111130 | hypothetical protein | |
| 5053 | SEQF8749.1_CP029048.1 | SEQF8749.1_05181 | open | 1107 [NA] | 368 [AA] | 111592-112698 | hypothetical protein | |
| 5054 | SEQF8749.1_CP029048.1 | SEQF8749.1_05182 | open | 666 [NA] | 221 [AA] | 113462-114127 | hypothetical protein | |
| 5055 | SEQF8749.1_CP029048.1 | SEQF8749.1_05183 | open | 1404 [NA] | 467 [AA] | 114634-116037 | mdlY_3 | Mandelamide hydrolase |
| 5056 | SEQF8749.1_CP029048.1 | SEQF8749.1_05184 | open | 2202 [NA] | 733 [AA] | 116443-118644 | hypothetical protein | |
| 5057 | SEQF8749.1_CP029048.1 | SEQF8749.1_05185 | open | 123 [NA] | 40 [AA] | 119978-120100 | hypothetical protein | |
| 5058 | SEQF8749.1_CP029048.1 | SEQF8749.1_05186 | open | 561 [NA] | 186 [AA] | 120578-121138 | hypothetical protein | |
| 5059 | SEQF8749.1_CP029048.1 | SEQF8749.1_05187 | open | 570 [NA] | 189 [AA] | 121839-122408 | odh_1 | Opine dehydrogenase |
| 5060 | SEQF8749.1_CP029048.1 | SEQF8749.1_05188 | open | 198 [NA] | 65 [AA] | 123149-123346 | hypothetical protein | |
| 5061 | SEQF8749.1_CP029048.1 | SEQF8749.1_05189 | open | 1062 [NA] | 353 [AA] | 123424-124485 | odh_2 | Opine dehydrogenase |
| 5062 | SEQF8749.1_CP029048.1 | SEQF8749.1_05190 | open | 1578 [NA] | 525 [AA] | 124908-126485 | gsiA_17 | Glutathione import ATP-binding protein GsiA |
| 5063 | SEQF8749.1_CP029048.1 | SEQF8749.1_05191 | open | 879 [NA] | 292 [AA] | 126482-127360 | gsiD_9 | Glutathione transport system permease protein GsiD |
| 5064 | SEQF8749.1_CP029048.1 | SEQF8749.1_05192 | open | 942 [NA] | 313 [AA] | 127357-128298 | gsiC_18 | Glutathione transport system permease protein GsiC |
| 5065 | SEQF8749.1_CP029048.1 | SEQF8749.1_05193 | open | 1122 [NA] | 373 [AA] | 128295-129416 | soxA_6 | Monomeric sarcosine oxidase |
| 5066 | SEQF8749.1_CP029048.1 | SEQF8749.1_05194 | open | 1380 [NA] | 459 [AA] | 129413-130792 | hcnB_2 | Hydrogen cyanide synthase subunit HcnB |
| 5067 | SEQF8749.1_CP029048.1 | SEQF8749.1_05195 | open | 300 [NA] | 99 [AA] | 130789-131088 | hcnA_2 | Hydrogen cyanide synthase subunit HcnA |
| 5068 | SEQF8749.1_CP029048.1 | SEQF8749.1_05196 | open | 1110 [NA] | 369 [AA] | 131069-132178 | hcnC | Hydrogen cyanide synthase subunit HcnC |
| 5069 | SEQF8749.1_CP029048.1 | SEQF8749.1_05197 | open | 903 [NA] | 300 [AA] | 132273-133175 | occR_2 | Octopine catabolismuptake operon regulatory protein OccR |
| 5070 | SEQF8749.1_CP029048.1 | SEQF8749.1_05198 | open | 1560 [NA] | 519 [AA] | 133237-134796 | gsiB_8 | Glutathione-binding protein GsiB |
| 5071 | SEQF8749.1_CP029048.1 | SEQF8749.1_05199 | open | 2115 [NA] | 704 [AA] | 135425-137539 | apc3_2 | Acetophenone carboxylase gamma subunit |
| 5072 | SEQF8749.1_CP029048.1 | SEQF8749.1_05200 | open | 1986 [NA] | 661 [AA] | 137544-139529 | apc4_2 | Acetophenone carboxylase delta subunit |
| 5073 | SEQF8749.1_CP029048.1 | SEQF8749.1_05201 | open | 894 [NA] | 297 [AA] | 139944-140837 | ansA_2 | L-asparaginase |
| 5074 | SEQF8749.1_CP029048.1 | SEQF8749.1_05202 | open | 957 [NA] | 318 [AA] | 140915-141871 | hcaR | Hca operon transcriptional activator HcaR |
| 5075 | SEQF8749.1_CP029048.1 | SEQF8749.1_05203 | open | 1044 [NA] | 347 [AA] | 142076-143119 | hypothetical protein | |
| 5076 | SEQF8749.1_CP029048.1 | SEQF8749.1_05204 | open | 885 [NA] | 294 [AA] | 143132-144016 | potB_5 | Spermidineputrescine transport system permease protein PotB |
| 5077 | SEQF8749.1_CP029048.1 | SEQF8749.1_05205 | open | 807 [NA] | 268 [AA] | 144021-144827 | dasC_5 | Diacetylchitobiose uptake system permease protein DasC |
| 5078 | SEQF8749.1_CP029048.1 | SEQF8749.1_05206 | open | 1086 [NA] | 361 [AA] | 144824-145909 | potA_7 | Spermidineputrescine import ATP-binding protein PotA |
| 5079 | SEQF8749.1_CP029048.1 | SEQF8749.1_05207 | open | 1059 [NA] | 352 [AA] | 146257-147315 | hypothetical protein | |
| 5080 | SEQF8749.1_CP029048.1 | SEQF8749.1_05208 | open | 1314 [NA] | 437 [AA] | 147410-148723 | hypothetical protein | |
| 5081 | SEQF8749.1_CP029048.1 | SEQF8749.1_05209 | open | 477 [NA] | 158 [AA] | 148736-149212 | hypothetical protein | |
| 5082 | SEQF8749.1_CP029048.1 | SEQF8749.1_05210 | open | 867 [NA] | 288 [AA] | 149212-150078 | hypothetical protein | |
| 5083 | SEQF8749.1_CP029048.1 | SEQF8749.1_05211 | open | 663 [NA] | 220 [AA] | 150084-150746 | hypothetical protein | |
| 5084 | SEQF8749.1_CP029048.1 | SEQF8749.1_05212 | open | 1197 [NA] | 398 [AA] | 150761-151957 | hypothetical protein | |
| 5085 | SEQF8749.1_CP029048.1 | SEQF8749.1_05213 | open | 219 [NA] | 72 [AA] | 151951-152169 | hypothetical protein | |
| 5086 | SEQF8749.1_CP029048.1 | SEQF8749.1_05214 | open | 810 [NA] | 269 [AA] | 152166-152975 | hypothetical protein | |
| 5087 | SEQF8749.1_CP029048.1 | SEQF8749.1_05215 | open | 2469 [NA] | 822 [AA] | 152947-155415 | virB4_4 | Type IV secretion system protein virB4 |
| 5088 | SEQF8749.1_CP029048.1 | SEQF8749.1_05216 | open | 300 [NA] | 99 [AA] | 155426-155725 | hypothetical protein | |
| 5089 | SEQF8749.1_CP029048.1 | SEQF8749.1_05217 | open | 402 [NA] | 133 [AA] | 155718-156119 | hypothetical protein | |
| 5090 | SEQF8749.1_CP029048.1 | SEQF8749.1_05218 | open | 972 [NA] | 323 [AA] | 156109-157080 | Type IV secretion system protein VirB11 | |
| 5091 | SEQF8749.1_CP029048.1 | SEQF8749.1_05219 | open | 636 [NA] | 211 [AA] | 157077-157712 | hypothetical protein | |
| 5092 | SEQF8749.1_CP029048.1 | SEQF8749.1_05220 | open | 858 [NA] | 285 [AA] | 158436-159293 | soj | Sporulation initiation inhibitor protein Soj |
| 5093 | SEQF8749.1_CP029048.1 | SEQF8749.1_05221 | open | 1011 [NA] | 336 [AA] | 159523-160533 | noc_5 | Nucleoid occlusion protein |
| 5094 | SEQF8749.1_CP029048.1 | SEQF8749.1_05222 | open | 1320 [NA] | 439 [AA] | 160748-162067 | hypothetical protein | |
| 5095 | SEQF8749.1_CP029048.1 | SEQF8749.1_05223 | open | 942 [NA] | 313 [AA] | 162076-163017 | hypothetical protein | |
| 5096 | SEQF8749.1_CP029048.1 | SEQF8749.1_05224 | open | 1113 [NA] | 370 [AA] | 163299-164411 | hypothetical protein | |
| 5097 | SEQF8749.1_CP029048.1 | SEQF8749.1_05225 | open | 591 [NA] | 196 [AA] | 164500-165090 | hypothetical protein | |
| 5098 | SEQF8749.1_CP029048.1 | SEQF8749.1_05226 | open | 447 [NA] | 148 [AA] | 165093-165539 | fitB | Toxin FitB |
| 5099 | SEQF8749.1_CP029048.1 | SEQF8749.1_05227 | open | 570 [NA] | 189 [AA] | 166136-166705 | hin | DNA-invertase hin |
| 5100 | SEQF8749.1_CP029048.1 | SEQF8749.1_05228 | open | 1218 [NA] | 405 [AA] | 166787-168004 | hypothetical protein | |
| 5101 | SEQF8749.1_CP029048.1 | SEQF8749.1_05229 | open | 717 [NA] | 238 [AA] | 168112-168828 | hypothetical protein | |
| 5102 | SEQF8749.1_CP029048.1 | SEQF8749.1_05230 | open | 585 [NA] | 194 [AA] | 168837-169421 | hypothetical protein | |
| 5103 | SEQF8749.1_CP029048.1 | SEQF8749.1_05231 | open | 945 [NA] | 314 [AA] | 169472-170416 | hypothetical protein | |
| 5104 | SEQF8749.1_CP029048.1 | SEQF8749.1_05232 | open | 405 [NA] | 134 [AA] | 170514-170918 | hypothetical protein | |
| 5105 | SEQF8749.1_CP029048.1 | SEQF8749.1_05233 | open | 393 [NA] | 130 [AA] | 170947-171339 | hypothetical protein | |
| 5106 | SEQF8749.1_CP029048.1 | SEQF8749.1_05234 | open | 1215 [NA] | 404 [AA] | 171343-172557 | hypothetical protein | |
| 5107 | SEQF8749.1_CP029048.1 | SEQF8749.1_05235 | open | 1077 [NA] | 358 [AA] | 172573-173649 | hypothetical protein | |
| 5108 | SEQF8749.1_CP029048.1 | SEQF8749.1_05236 | open | 567 [NA] | 188 [AA] | 173872-174438 | hypothetical protein | |
| 5109 | SEQF8749.1_CP029048.1 | SEQF8749.1_05237 | open | 996 [NA] | 331 [AA] | 175294-176289 | xerD_2 | Tyrosine recombinase XerD |
| 5110 | SEQF8749.1_CP029048.1 | SEQF8749.1_05238 | open | 627 [NA] | 208 [AA] | 176397-177023 | hypothetical protein | |
| 5111 | SEQF8749.1_CP029048.1 | SEQF8749.1_05239 | open | 93 [NA] | 30 [AA] | 177378-177470 | hypothetical protein | |
| 5112 | SEQF8749.1_CP029048.1 | SEQF8749.1_05240 | open | 1119 [NA] | 372 [AA] | 177486-178604 | hypothetical protein | |
| 5113 | SEQF8749.1_CP029048.1 | SEQF8749.1_05241 | open | 177 [NA] | 58 [AA] | 179060-179236 | hypothetical protein | |
| 5114 | SEQF8749.1_CP029048.1 | SEQF8749.1_05242 | open | 924 [NA] | 307 [AA] | 179452-180375 | hypothetical protein | |
| 5115 | SEQF8749.1_CP029048.1 | SEQF8749.1_05243 | open | 597 [NA] | 198 [AA] | 180336-180932 | hypothetical protein | |
| 5116 | SEQF8749.1_CP029048.1 | SEQF8749.1_05244 | open | 354 [NA] | 117 [AA] | 180929-181282 | hypothetical protein | |
| 5117 | SEQF8749.1_CP029048.1 | SEQF8749.1_05245 | open | 603 [NA] | 200 [AA] | 181772-182374 | hypothetical protein | |
| 5118 | SEQF8749.1_CP029048.1 | SEQF8749.1_05246 | open | 402 [NA] | 133 [AA] | 182387-182788 | hypothetical protein | |
| 5119 | SEQF8749.1_CP029048.1 | SEQF8749.1_05247 | open | 5088 [NA] | 1695 [AA] | 182918-188005 | hypothetical protein | |
| 5120 | SEQF8749.1_CP029048.1 | SEQF8749.1_05248 | open | 1788 [NA] | 595 [AA] | 188313-190100 | hypothetical protein | |
| 5121 | SEQF8749.1_CP029048.1 | SEQF8749.1_05249 | open | 474 [NA] | 157 [AA] | 190197-190670 | hypothetical protein | |
| 5122 | SEQF8749.1_CP029048.1 | SEQF8749.1_05250 | open | 888 [NA] | 295 [AA] | 190667-191554 | hypothetical protein | |
| 5123 | SEQF8749.1_CP029048.1 | SEQF8749.1_05251 | open | 309 [NA] | 102 [AA] | 191551-191859 | hypothetical protein | |
| 5124 | SEQF8749.1_CP029048.1 | SEQF8749.1_05252 | open | 210 [NA] | 69 [AA] | 191856-192065 | hypothetical protein | |
| 5125 | SEQF8749.1_CP029048.1 | SEQF8749.1_05253 | open | 306 [NA] | 101 [AA] | 192085-192390 | hypothetical protein |