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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Agrobacterium tumefaciens 15-174 (SEQF8759.1)
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PROKKA Annotation for SEQF8759.1
Genome selected: Agrobacterium tumefaciens 15-174
Contigs:42 Bases:6054965 bps
CDS:5633 rRNA:3
tmRNA:1 tRNA:48
Annotation Table [page:12]
Number of Records Found: 5633 [12 Pages]
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# Molecule PID Genome
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NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
5501 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05612 open 279 [NA] 92 [AA] 72435-72713 hypothetical protein
5502 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05613 open 270 [NA] 89 [AA] 72710-72979 hypothetical protein
5503 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05614 open 288 [NA] 95 [AA] 73091-73378 hypothetical protein
5504 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05615 open 111 [NA] 36 [AA] 73436-73546 hypothetical protein
5505 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05616 open 1050 [NA] 349 [AA] 73882-74931 degA_2 HTH-type transcriptional regulator DegA
5506 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05617 open 954 [NA] 317 [AA] 74967-75920 yphF ABC transporter periplasmic-binding protein YphF
5507 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05618 open 810 [NA] 269 [AA] 75917-76726 frcA_5 Fructose import ATP-binding protein FrcA
5508 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05619 open 1005 [NA] 334 [AA] 76723-77727 xylH_3 Xylose transport system permease protein XylH
5509 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05620 open 1068 [NA] 355 [AA] 77732-78799 hypothetical protein
5510 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05621 open 771 [NA] 256 [AA] 78825-79595 hypothetical protein
5511 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05622 open 1587 [NA] 528 [AA] 79627-81213 RBKS_2 Ribokinase
5512 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05623 open 1257 [NA] 418 [AA] 81410-82666 hyuC_2 N-carbamoyl-L-amino-acid hydrolase
5513 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05624 open 558 [NA] 185 [AA] 82929-83486 hypothetical protein
5514 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05625 open 2790 [NA] 929 [AA] 83825-86614 acnB Aconitate hydratase B
5515 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05626 open 1125 [NA] 374 [AA] 86860-87984 hypothetical protein
5516 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05627 open 1953 [NA] 650 [AA] 87984-89936 asnB Asparagine synthetase [glutamine-hydrolyzing] 1
5517 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05628 open 264 [NA] 87 [AA] 89933-90196 hypothetical protein
5518 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05629 open 1533 [NA] 510 [AA] 90215-91747 lcfB_2 Long-chain-fatty-acid--CoA ligase
5519 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05630 open 999 [NA] 332 [AA] 91744-92742 nadE_3 NH(3)-dependent NAD(+) synthetase
5520 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05631 open 519 [NA] 172 [AA] 92907-93425 hypothetical protein
5521 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05632 open 321 [NA] 106 [AA] 93630-93950 hypothetical protein
5522 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05633 open 576 [NA] 191 [AA] 94187-94762 hypothetical protein
5523 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05634 open 2925 [NA] 974 [AA] 94755-97679 soxA_4 Sarcosine oxidase subunit alpha
5524 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05635 open 291 [NA] 96 [AA] 97676-97966 soxD_2 Sarcosine oxidase subunit delta
5525 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05636 open 1251 [NA] 416 [AA] 97977-99227 soxB_4 Sarcosine oxidase subunit beta
5526 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05637 open 987 [NA] 328 [AA] 99368-100354 cdhR_6 HTH-type transcriptional regulator CdhR
5527 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05638 open 1542 [NA] 513 [AA] 100410-101951 rbsA_7 Ribose import ATP-binding protein RbsA
5528 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05639 open 978 [NA] 325 [AA] 101956-102933 alsC D-allose transport system permease protein AlsC
5529 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05640 open 1095 [NA] 364 [AA] 102944-104038 frcC_2 Fructose import permease protein FrcC
5530 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05641 open 1026 [NA] 341 [AA] 104124-105149 hypothetical protein
5531 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05642 open 750 [NA] 249 [AA] 105316-106065 rspR_5 HTH-type transcriptional repressor RspR
5532 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05643 open 741 [NA] 246 [AA] 106088-106828 fabG_14 3-oxoacyl-[acyl-carrier-protein] reductase FabG
5533 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05644 open 1473 [NA] 490 [AA] 106848-108320 mtlK_2 Mannitol 2-dehydrogenase
5534 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05645 open 1194 [NA] 397 [AA] 108324-109517 uxuA_3 Mannonate dehydratase
5535 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05646 open 990 [NA] 329 [AA] 109514-110503 pld1_2 Pyridoxal 4-dehydrogenase
5536 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05647 open 843 [NA] 280 [AA] 110529-111371 hypothetical protein
5537 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05648 open 1227 [NA] 408 [AA] 111456-112682 hypothetical protein
5538 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05649 open 591 [NA] 196 [AA] 112804-113394 hypothetical protein
5539 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05650 open 1038 [NA] 345 [AA] 113690-114727 D-xylulose reductase
5540 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05651 open 885 [NA] 294 [AA] 115106-115990 rhaS_11 HTH-type transcriptional activator RhaS
5541 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05652 open 912 [NA] 303 [AA] 116087-116998 rbsB_5 Ribose import binding protein RbsB
5542 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05653 open 1503 [NA] 500 [AA] 117070-118572 rbsA_8 Ribose import ATP-binding protein RbsA
5543 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05654 open 978 [NA] 325 [AA] 118562-119539 rbsC_12 Ribose import permease protein RbsC
5544 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05655 open 732 [NA] 243 [AA] 119578-120309 rbtD Ribitol 2-dehydrogenase
5545 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05656 open 1611 [NA] 536 [AA] 120335-121945 araB_3 Ribulokinase
5546 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05657 open 726 [NA] 241 [AA] 122001-122726 golD NAD-dependent glycerol dehydrogenase
5547 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05658 open 1521 [NA] 506 [AA] 122793-124313 proP_2 Prolinebetaine transporter
5548 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05659 open 297 [NA] 98 [AA] 124499-124795 hypothetical protein
5549 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05660 open 840 [NA] 279 [AA] 125011-125850 suhB_3 Inositol-1-monophosphatase
5550 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05661 open 609 [NA] 202 [AA] 125904-126512 hypothetical protein
5551 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05662 open 1683 [NA] 560 [AA] 126506-128188 hypothetical protein
5552 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05663 open 1644 [NA] 547 [AA] 128286-129929 hypothetical protein
5553 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05664 open 987 [NA] 328 [AA] 129978-130964 degA_3 HTH-type transcriptional regulator DegA
5554 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05665 open 1854 [NA] 617 [AA] 131483-133336 hypothetical protein
5555 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05666 open 1134 [NA] 377 [AA] 133336-134469 msiK_4 Diacetylchitobiose uptake system ATP-binding protein MsiK
5556 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05667 open 1128 [NA] 375 [AA] 134514-135641 hypothetical protein
5557 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05668 open 1149 [NA] 382 [AA] 135658-136806 hypothetical protein
5558 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05669 open 1113 [NA] 370 [AA] 136856-137968 hypothetical protein
5559 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05670 open 912 [NA] 303 [AA] 138035-138946 cysQ_7 3(2)%2C5-bisphosphate nucleotidase CysQ
5560 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05671 open 627 [NA] 208 [AA] 138996-139622 hypothetical protein
5561 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05672 open 1560 [NA] 519 [AA] 139736-141295 hypothetical protein
5562 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05673 open 1017 [NA] 338 [AA] 141597-142613 hypothetical protein
5563 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05674 open 666 [NA] 221 [AA] 142872-143537 hypothetical protein
5564 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05675 open 1086 [NA] 361 [AA] 143608-144693 sugC_3 Trehalose import ATP-binding protein SugC
5565 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05676 open 828 [NA] 275 [AA] 144690-145517 dasC_5 Diacetylchitobiose uptake system permease protein DasC
5566 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05677 open 903 [NA] 300 [AA] 145514-146416 melD_5 Melibioseraffinosestachyose import permease protein MelD
5567 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05678 open 1233 [NA] 410 [AA] 146531-147763 cycB Cyclodextrin-binding protein
5568 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05679 open 903 [NA] 300 [AA] 147832-148734 hypothetical protein
5569 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05680 open 1035 [NA] 344 [AA] 148747-149781 iolG_13 Inositol 2-dehydrogenaseD-chiro-inositol 3-dehydrogenase
5570 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05681 open 1038 [NA] 345 [AA] 149921-150958 ccpA_4 Catabolite control protein A
5571 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05682 open 879 [NA] 292 [AA] 150967-151845 hypothetical protein
5572 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05683 open 1032 [NA] 343 [AA] 151975-153006 cdhR_7 HTH-type transcriptional regulator CdhR
5573 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05684 open 1254 [NA] 417 [AA] 153107-154360 soxB_5 Sarcosine oxidase subunit beta
5574 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05685 open 321 [NA] 106 [AA] 154372-154692 soxD_3 Sarcosine oxidase subunit delta
5575 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05686 open 2991 [NA] 996 [AA] 154689-157679 soxA_5 Sarcosine oxidase subunit alpha
5576 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05687 open 555 [NA] 184 [AA] 157693-158247 hypothetical protein
5577 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05688 open 1269 [NA] 422 [AA] 158265-159533 glyA2_3 Serine hydroxymethyltransferase 2
5578 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05689 open 885 [NA] 294 [AA] 159624-160508 purU_4 Formyltetrahydrofolate deformylase
5579 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05690 open 2094 [NA] 697 [AA] 160533-162626 hypothetical protein
5580 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05691 open 618 [NA] 205 [AA] 162623-163240 hypothetical protein
5581 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05692 open 1632 [NA] 543 [AA] 163224-164855 putative sulfate transporter
5582 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05693 open 396 [NA] 131 [AA] 165075-165470 hypothetical protein
5583 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05694 open 1914 [NA] 637 [AA] 165634-167547 hypothetical protein
5584 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05695 open 714 [NA] 237 [AA] 167677-168390 hypothetical protein
5585 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05696 open 756 [NA] 251 [AA] 168421-169176 entA 2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase
5586 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05697 open 870 [NA] 289 [AA] 169190-170059 entB Enterobactin synthase component B
5587 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05698 open 1620 [NA] 539 [AA] 170133-171752 entE Enterobactin synthase component E
5588 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05699 open 1176 [NA] 391 [AA] 171771-172946 entC Isochorismate synthase EntC
5589 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05700 open 4440 [NA] 1479 [AA] 173028-177467 dltA D-alanine--D-alanyl carrier protein ligase
5590 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05701 open 1347 [NA] 448 [AA] 177516-178862 dhbF Dimodular nonribosomal peptide synthase
5591 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05702 open 2856 [NA] 951 [AA] 179162-182017 hypothetical protein
5592 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05703 open 234 [NA] 77 [AA] 182087-182320 hypothetical protein
5593 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05704 open 840 [NA] 279 [AA] 182358-183197 yqjH NADPH-dependent ferric-chelate reductase
5594 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05705 open 954 [NA] 317 [AA] 183430-184383 yhfQ Putative ABC transporter substrate-binding lipoprotein YhfQ
5595 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05706 open 1065 [NA] 354 [AA] 184407-185471 hmuU_3 Hemin transport system permease protein HmuU
5596 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05707 open 1014 [NA] 337 [AA] 185483-186496 yfiZ_3 putative siderophore transport system permease protein YfiZ
5597 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05708 open 792 [NA] 263 [AA] 186493-187284 fecE_3 Fe(3+) dicitrate transport ATP-binding protein FecE
5598 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05709 open 1302 [NA] 433 [AA] 187509-188810 ntaA_7 Nitrilotriacetate monooxygenase component A
5599 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05710 open 777 [NA] 258 [AA] 188813-189589 yiaJ DNA-binding transcriptional repressor YiaJ
5600 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05711 open 2103 [NA] 700 [AA] 189862-191964 fyuA Pesticin receptor
5601 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05712 open 1188 [NA] 395 [AA] 192053-193240 mmgC_2 Acyl-CoA dehydrogenase
5602 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05713 open 927 [NA] 308 [AA] 193337-194263 gcvA_11 Glycine cleavage system transcriptional activator
5603 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05714 open 1068 [NA] 355 [AA] 194392-195459 degA_4 HTH-type transcriptional regulator DegA
5604 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05715 open 1023 [NA] 340 [AA] 195456-196478 potF Putrescine-binding periplasmic protein
5605 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05716 open 828 [NA] 275 [AA] 196648-197475 hypothetical protein
5606 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05717 open 780 [NA] 259 [AA] 197472-198251 ydcV_4 Inner membrane ABC transporter permease protein YdcV
5607 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05718 open 1026 [NA] 341 [AA] 198244-199269 btuD_18 Vitamin B12 import ATP-binding protein BtuD
5608 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05719 open 921 [NA] 306 [AA] 199272-200192 rihA_2 Pyrimidine-specific ribonucleoside hydrolase RihA
5609 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05720 open 1794 [NA] 597 [AA] 200189-201982 ade2 Adenine deaminase 2
5610 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05721 open 924 [NA] 307 [AA] 202010-202933 benM HTH-type transcriptional regulator BenM
5611 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05722 open 1248 [NA] 415 [AA] 203026-204273 ynfM Inner membrane transport protein YnfM
5612 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05723 open 1173 [NA] 390 [AA] 204303-205475 hipO_7 Hippurate hydrolase
5613 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05724 open 708 [NA] 235 [AA] 205683-206390 pyrE_2 Orotate phosphoribosyltransferase
5614 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05725 open 1056 [NA] 351 [AA] 206597-207652 hypothetical protein
5615 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05726 open 1641 [NA] 546 [AA] 207703-209343 ddpA_4 putative D%2CD-dipeptide-binding periplasmic protein DdpA
5616 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05727 open 1068 [NA] 355 [AA] 209362-210429 dppB_14 Dipeptide transport system permease protein DppB
5617 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05728 open 933 [NA] 310 [AA] 210426-211358 ddpC_8 putative D%2CD-dipeptide transport system permease protein DdpC
5618 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05729 open 837 [NA] 278 [AA] 211355-212191 ddpD putative D%2CD-dipeptide transport ATP-binding protein DdpD
5619 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05730 open 750 [NA] 249 [AA] 212188-212937 oppF_6 Oligopeptide transport ATP-binding protein OppF
5620 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05731 open 903 [NA] 300 [AA] 213005-213907 gltC_3 HTH-type transcriptional regulator GltC
5621 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05732 open 1539 [NA] 512 [AA] 214091-215629 gsiB_7 Glutathione-binding protein GsiB
5622 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05733 open 951 [NA] 316 [AA] 215859-216809 gsiC_16 Glutathione transport system permease protein GsiC
5623 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05734 open 822 [NA] 273 [AA] 216806-217627 gsiD_13 Glutathione transport system permease protein GsiD
5624 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05735 open 1398 [NA] 465 [AA] 217681-219078 aam Acylamidase
5625 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05736 open 567 [NA] 188 [AA] 219174-219740 yfkM General stress protein 18
5626 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05737 open 351 [NA] 116 [AA] 219812-220162 hypothetical protein
5627 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05738 open 921 [NA] 306 [AA] 220199-221119 gsiD_14 Glutathione transport system permease protein GsiD
5628 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05739 open 1011 [NA] 336 [AA] 221112-222122 dppB_15 Dipeptide transport system permease protein DppB
5629 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05740 open 1710 [NA] 569 [AA] 222199-223908 oppA Periplasmic oligopeptide-binding protein
5630 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05741 open 1164 [NA] 387 [AA] 224214-225377 hipO_8 Hippurate hydrolase
5631 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05742 open 1851 [NA] 616 [AA] 225426-227276 gsiA_20 Glutathione import ATP-binding protein GsiA
5632 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05743 open 954 [NA] 317 [AA] 227538-228491 eryD_3 Erythritol catabolism regulatory protein EryD
5633 SEQF8759.1_LXKY01000042.1 SEQF8759.1_05744 open 1314 [NA] 437 [AA] 228635-229948 hypothetical protein