Home Login Register Reset Password Taxon Description Taxon Table Taxonomic Hierarchy Taxonomic Level Identify 16S rRNA Sequence BLAST Sequence(s) Download 16S rDNA RefSeq Genomes Taxa with Annotated Genomes Taxa with Genomes In Progress View All Genomes Tools & Download HOMD Genome Viewer Dynamic Genome Annotation Blast Against HOMD Genomes BLAST against a selected human oral microbial genome BLAST against all human oral microbial genomes BLAST against all HOMD annotated human oral microbial genomes Download HOMD Data HOMD Information How to Cite HOMD Project Description People Contact Us Mailing List Usage Statistics Site Map How to Use This Page User's Guide Hands on Guide to HOMD Page: GV1

Genome Explorer Surveyed genome:  Porphyromonas gingivalis W83 Selected tool: Genome Viewer Change genome: Select a categoryGenomes with dynamic HOMD annotatonGenomes with static annotation onlyCompleted genomesLow coverage genome surveysHigh coverage genomic sequencesAll genomes  Select a genome (total: 50) Actinomyces naeslundii MG1 Actinomyces odontolyticus DSM 43331, ATCC 17982 Aggregatibacter actinomycetemcomitans HK1651 Atopobium rimae ATCC 49626, VPI D140H-11A Bifidobacterium dentium ATCC 27678 Bulleidia extructa ATCC BAA-170, DSM 13220 Campylobacter gracilis ATCC 33236 Campylobacter rectus ATCC 33238 Campylobacter rectus RM3267 Campylobacter showae ATCC 51146 Capnocytophaga sputigena ATCC 33612 Corynebacterium matruchotii ATCC 33806 Eikenella corrodens ATCC 23834 Enterobacter cancerogenus ATCC 35316 Enterococcus faecalis ATCC 19433 NCTC 775 DSM 20478, JCM 8726, NCDO 581 Eubacterium infirmum ATCC 700433 NCTC 12940 Finegoldia magna ATCC 29328 Fusobacterium nucleatum subsp. vincentii ATCC 49256 Gemella haemolysans ATCC 10379 Jonquetella anthropi E3_33 E1 Lactobacillus jensenii 1153 Lactobacillus paracasei subsp. paracasei 8700:2 Leptotrichia buccalis ATCC 14201 Mitsuokella multacida A 405-1, DSM 20544, ATCC 27723, NCTC 10 Neisseria flavescens NRL30031/H21 Neisseria lactamica ATCC 23970 Neisseria mucosa ATCC 25996 Neisseria subflava NJ9703 Ochrobactrum anthropi Parvimonas micra ATCC 33270 Porphyromonas gingivalis ATCC 33277 Porphyromonas gingivalis W83 Prevotella intermedia 17 Prevotella sp. oral taxon 302 F0020 Propionibacterium acnes SK137 Pyramidobacter piscolens W5455 (TFI) Pyramidobacter piscolens W5455 (JCVI) Solobacterium moorei W5408 Streptococcus mitis NCTC 12261 Streptococcus sanguinis SK36 Synergistetes sp. SGP1 Tannerella forsythia ATCC 43037 FDC 338 [CCUG 21028A, CCUG 33064] TM7 single cell project a TM7 single cell project b TM7 single cell project c Treponema denticola ATCC 35405, DSM 14222 Treponema lecithinolyticum OMZ 684T Veillonella dispar ATCC 17748 Veillonella parvula ATCC 17745 Veillonella parvula Te3, DSM 2008, ATCC 10790, JCM 1297 Choose a tool: Genome Viewer

Porphyromonas gingivalis W83    [NCBI Full]    2343476 bps Window range:  Feature in focus:       (require Javascript) Viewer controller (prior range) 2 X 5 X 10 X 20 X (next range)  |<<  (prior contig) (next contig)  >>|  Jump to a range from to   (1-2343476 bps)       Jump to the ORF ID HOMD id (pgin_c_x_x)Los Alamos idNCBI idTIGR id  Select viewer blocks: HOMD BlastP TIGR annotation NCBI annotation Los Alamos annotation User annotation GC profile GTCA profile TIGR Microarray Nimblegen Tiling array GC content blocks: Select window size: 20 bps 50 bps 100 bps 200 bps 300 bps 500 bps Genome info: Porphyromonas gingivalis W83  [NCBI Full]    Total contigs: 1 Total base pairs: 2343476 bps GC average: 48.29 % Total Blast Hits: 2622 Seq Released Date: 2005-12-04 HOMD Taxon Description: 619 HOMD Genome Detial Info: SEQF1064

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