HOMD :: Human Oral Microbiome Database

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16S rRNA RefSeq
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HOMD Information
Page: HP1

16S rRNA Refseq V15.22 Genomic RefSeq V9.14

HOMD Genomes

Navigate genomes by Phylum:

Navigate genomes by alphabet:
A|B|C|D|E|F|G|H|I|J|K|L|M|N|O|P|Q|R|S|T|U|V|W|X|Y|Z|All Entries: 2074 genomes

genomes: Options [+]
In: Matching
	Sequencing Status: All Complete High Coverage Survey
	Annotation: All HOMD with StaticHOMD onlyStatic onlyNon-oral/nasal

No. of genomes found: 2581 (556 taxa)

Oral
Taxon ID Ascending

Ascending

Strain/Culture
Collection *

No. of
contigs
& plasmids *

Combined
length (bp) *

GC
(%)

Genome Info and Tools

Available Annotations

--

Acinetobacter

baumannii

VEB

4

--

--

PROKKA

NCBI

HOMD

--

Acinetobacter

baumannii

WBL7215

4

3,000,000

--

PROKKA

NCBI

HOMD

--

Acinetobacter

baumannii

WBA9388

4

3,000,000

--

PROKKA

NCBI

HOMD

--

Acinetobacter

baumannii

WBL7355

4

3,000,000

--

PROKKA

NCBI

HOMD

--

Actinobaculum

sp. oral taxon 183

F0552

73

2,366,015

--

PROKKA

NCBI

HOMD

--

Aggregatibacter

actinomycetemcomitans

unknown strain B

4

868,000

--

PROKKA

NCBI

HOMD

--

Aggregatibacter

actinomycetemcomitans

unknown strain A

1

509,000

--

PROKKA

NCBI

HOMD

--

Aggregatibacter

actinomycetemcomitans

unknown strain C

1

2,078,000

--

PROKKA

NCBI

HOMD

--

Agrobacterium

tumefaciens

C58-UWash, ATCC 33970

4

2,841,000

--

PROKKA

HOMD

--

Alloprevotella

tannerae

ATCC 51259

6

2,585,719

--

PROKKA

NCBI

HOMD

--

Alloprevotella

rava

F0323

30

2,593,873

--

PROKKA

NCBI

HOMD

--

Atopobium

vaginae

CCUG 38953 ATCC BAA-55

--

--

--

PROKKA

NCBI

HOMD

--

Atopobium

minutum

ATCC 33267

--

1,965,000

--

PROKKA

NCBI

HOMD

--

Bacillus

subtilis

subsp. subtilis str. NCIB

1

4,000,000

--

PROKKA

NCBI

HOMD

--

Bacillus

subtilis

RO-NN-1 (168 group)

--

--

--

PROKKA

NCBI

HOMD

--

Bacillus

anthracis

'34F2

--

--

--

PROKKA

NCBI

HOMD

--

Bacillus

anthracis

'34F2

--

--

--

PROKKA

NCBI

HOMD

--

Bacillus

subtilis

subsp.

1

4,000,000

--

PROKKA

NCBI

HOMD

--

Bacillus

subtilis

TU-B-10 (W23 group)

--

--

--

PROKKA

NCBI

HOMD

--

Bacillus

subtilis

str. L170

1

4,000,000

--

PROKKA

NCBI

HOMD

--

Bacillus

anthracis

A0039

3

5,228,000

--

PROKKA

NCBI

HOMD

--

Capnocytophaga

granulosa

ATCC 51502

--

--

--

PROKKA

NCBI

HOMD

--

Dialister

pneumosintes

DSM 11619 ATCC 33048

--

1,300,000

--

PROKKA

NCBI

HOMD

--

Dialister

invisus

--

--

1,884,000

--

PROKKA

NCBI

HOMD

--

Enterococcus

faecalis

--

--

122,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

RS218

2

--

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

LW1655F

7

4,000,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

O157:H7 str Sakai (EHEC)

3

5,594,477

--

PROKKA

HOMD

--

Escherichia

coli

non-K1 invasive clinical isolate

--

122,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

O157:H7 str. GZ-021210/cattle

3

--

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

F18+

7

--

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

NC-7

7

4,000,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

ETEC-H10407

--

122,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

UPEC-536

1

4,938,920

--

PROKKA

HOMD

--

Escherichia

coli

c7122

2

5,500,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

Nissle 1917

--

122,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

O26:H11

--

122,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

0111:H-

--

122,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

str. K12 substr. DH10B

1

4,686,137

--

PROKKA

HOMD

--

Escherichia

coli

EPEC-E2348/69

2

--

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

789 AC/1

--

4,800,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

0157:H7 VT2 Sakai

--

5,498,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

H8

--

122,000

--

PROKKA

NCBI

HOMD

--

Escherichia

coli

str. K12 substr. MG1655

1

4,639,675

--

PROKKA

HOMD

--

Escherichia

coli

O103:H2

--

122,000

--

PROKKA

NCBI

HOMD

--

Eubacterium

saburreum

DSM 3986

150

2,970,488

--

PROKKA

NCBI

HOMD

--

Finegoldia

magna

ATCC 29328

100

62,905

--

PROKKA

NCBI

HOMD

--

Fretibacterium

fastidiosum

SGP1

1

2,728,333

--

PROKKA

NCBI

HOMD

--

Fusobacterium

nucleatum subsp. nucleatum

ATCC 23726

--

2,400,000

--

PROKKA

NCBI

HOMD

--

Granulicatella

elegans

ATCC 700633

--

--

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

3224A

--

122,000

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

NML-20

1

1,000,000

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

PittFF

--

--

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

PittJJ

--

--

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

R1838

1

1,000,000

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

PittCC

--

--

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

PittDD

--

1,760,000

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

str.10810 (serotype B)

--

2,100,000

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

R393

1

1,000,000

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

PittBB

--

--

--

PROKKA

NCBI

HOMD

--

Haemophilus

influenzae

22.1-24

--

1,000,000

--

PROKKA

NCBI

HOMD

--

Helicobacter

pylori

gastric cancer1

--

122,000

--

PROKKA

NCBI

HOMD

--

Helicobacter

pylori

duodenal ulcer

--

122,000

--

PROKKA

NCBI

HOMD

--

Klebsiella

pneumoniae

--

--

122,000

--

PROKKA

NCBI

HOMD

--

Lactobacillus

rhamnosus

ATCC 53103

--

2,300,000

--

PROKKA

NCBI

HOMD

--

Leptotrichia

sp. oral taxon 879

F0557

79

2,415,750

--

PROKKA

NCBI

HOMD

--

Listeria

monocytogenes

XFL0605

1

3,000,000

--

PROKKA

NCBI

HOMD

--

Listeria

monocytogenes

Italy

1

2,000,000

--

PROKKA

NCBI

HOMD

--

Methanobrevibacter

oralis

1

--

--

--

PROKKA

NCBI

HOMD

--

Mogibacterium

timidum

VPI D10B-17, DSM 3998, ATCC 33092

--

--

--

PROKKA

NCBI

HOMD

--

Mogibacterium

timidum

1

--

--

--

PROKKA

NCBI

HOMD

--

Mycoplasma

orale

--

--

675,000

--

PROKKA

NCBI

HOMD

--

Mycoplasma

hominis

PG21

--

700,000

--

PROKKA

NCBI

HOMD

--

Neisseria

meningitidis

--

--

122,000

--

PROKKA

NCBI

HOMD

--

Neisseria

meningitidis

ST-53 a-14

--

2,146,000

--

PROKKA

NCBI

HOMD

--

Neisseria

lactamica

ST-640

--

2,300,000

--

PROKKA

NCBI

HOMD

--

Neisseria

meningitidis

ST-22

--

--

--

PROKKA

NCBI

HOMD

--

Neisseria

meningitidis

ST-136

--

--

--

PROKKA

NCBI

HOMD

--

Neisseria

meningitidis

ST-60

--

--

--

PROKKA

NCBI

HOMD

--

Peptoniphilus

asaccharolyticus

UW 228, DSM 20463, ATCC 14963, NCIB 10074, NCTC 11

--

--

--

PROKKA

NCBI

HOMD

--

Porphyromonas

sp. oral taxon 278

W7784

39

2,163,634

--

PROKKA

NCBI

HOMD

--

Prevotella

maculosa

F0099

--

--

--

PROKKA

NCBI

HOMD

--

Prevotella

tannerae

ATCC 51259

--

--

--

PROKKA

NCBI

HOMD

--

Propionibacterium

acidifaciens

F0233

36

2,064,725

--

PROKKA

NCBI

HOMD

--

Propionibacterium

acnes

--

--

2,800,000

--

PROKKA

NCBI

HOMD

--

Proteus

mirabilis

--

--

122,000

--

PROKKA

NCBI

HOMD

--

Pseudomonas

aeruginosa

PKS6

--

--

--

PROKKA

NCBI

HOMD

--

Pseudomonas

aeruginosa

clinical isolates pacs5296(lat

--

--

--

PROKKA

NCBI

HOMD

--

Pseudomonas

aeruginosa

OPPA8

--

--

--

PROKKA

NCBI

HOMD

--

Pseudomonas

aeruginosa

clinical isolates pacs416 (early)

--

122,000

--

PROKKA

NCBI

HOMD

--

Pseudomonas

pseudoalcaligenes

MTCC 5210

--

--

--

PROKKA

NCBI

HOMD

--

Pseudomonas

aeruginosa

PK6

--

--

--

PROKKA

NCBI

HOMD

--

Pseudomonas

aeruginosa

LES

--

6,300,000

--

PROKKA

NCBI

HOMD

--

Pyramidobacter

piscolens

W5455

--

--

--

PROKKA

NCBI

HOMD

--

Rothia

aeria

F0474

50

2,584,293

--

PROKKA

NCBI

HOMD

--

Selenomonas

sp. oral taxon 149

F0410

--

--

--

PROKKA

NCBI

HOMD

--

Selenomonas

sputigena

DSM 20758

--

--

--

PROKKA

NCBI

HOMD

--

Slackia

exigua

ATCC 700122

--

--

--

PROKKA

NCBI

HOMD

--

Staphylococcus

aureus

930131

--

2,564,000

--

PROKKA

NCBI

HOMD

--

Staphylococcus

epidermidis

--

--

122,000

--

PROKKA

NCBI

HOMD

--

Staphylococcus

aureus

MSSA

--

--

--

PROKKA

NCBI

HOMD

--

Staphylococcus

aureus

MN8

--

2,840,000

--

PROKKA

NCBI

HOMD

--

Staphylococcus

aureus

--

--

122,000

--

PROKKA

NCBI

HOMD

--

Staphylococcus

aureus subsp. aureus

USA300

--

--

--

PROKKA

NCBI

HOMD

--

Staphylococcus

aureus

EMRSA15

--

2,800,000

--

PROKKA

NCBI

HOMD

--

Staphylococcus

aureus

JH1 VISA

2

2,936,936

--

PROKKA

HOMD

--

Staphylococcus

epidermidis

ATCC 14990

--

2,377,000

--

PROKKA

NCBI

HOMD

--

Staphylococcus

aureus

Michigan VRSA plasmids

--

57,000

--

PROKKA

NCBI

HOMD

--

Staphylococcus

aureus

ATCC 29213

--

2,621,000

--

PROKKA

NCBI

HOMD

--

Staphylococcus

aureus

0582

--

3,000,000

--

PROKKA

NCBI

HOMD

--

Stomatobaculum

longum

ACC2

5

2,313,632

--

PROKKA

NCBI

HOMD

--

Streptococcus

pneumoniae

--

--

122,000

--

PROKKA

NCBI

HOMD

--

Streptococcus

pneumoniae

G54

--

2,074,000

--

PROKKA

NCBI

HOMD

--

Streptococcus

agalactiae

str. Camel

1

2,000,000

--

PROKKA

NCBI

HOMD

--

Streptococcus

pneumoniae

459-2

--

--

--

PROKKA

NCBI

HOMD

--

Streptococcus

mitis biovar 2

F0392

2

1,916,998

--

PROKKA

HOMD

--

Streptococcus

sp. oral taxon 071

F0408

--

--

--

PROKKA

NCBI

HOMD

--

Streptococcus

pneumoniae

--

--

2,057,000

--

PROKKA

NCBI

HOMD

--

Streptococcus

sp. oral taxon 056

F0418

1

1,943,250

--

PROKKA

NCBI

HOMD

--

Streptococcus

mutans

--

--

2,400,000

--

PROKKA

NCBI

HOMD

--

Streptococcus

pneumoniae

23F (Spanish 23F-1)

--

2,200,000

--

PROKKA

NCBI

HOMD

--

Streptococcus

pneumoniae

serotype 6

--

122,000

--

PROKKA

NCBI

HOMD

--

Streptococcus

pneumoniae

459-5

--

--

--

PROKKA

NCBI

HOMD

--

Streptococcus

sobrinus

6715

--

2,200,000

--

PROKKA

NCBI

HOMD

--

Synergistes

jonesii

--

1

2,743,000

--

PROKKA

NCBI

HOMD

--

Tannerella

forsythia

--

--

--

--

PROKKA

NCBI

HOMD

--

Treponema

socranskii

ATCC 35535

2

2,742,149

--

PROKKA

NCBI

HOMD

--

Veillonella

parvula

ATCC 17745

19

2,163,473

--

PROKKA

HOMD

Bartonella

schoenbuchensis

m07a

5

1,680,471

37.8

HOMD

Sphingomonas

echinoides

ATCC 14820

--

--

--

PROKKA

NCBI

HOMD

Sphingomonas

echinoides

ATCC 14820

6

4,264,936

65.4

HOMD

Acinetobacter

lwoffii

niph_512

12

3,384,618

43.1

HOMD

Porphyrobacter

tepidarius

DSM 10594

32

3,216,818

65.9

HOMD

Porphyrobacter

tepidarius

DSM 10594

--

--

--

PROKKA

NCBI

HOMD

Acinetobacter

radioresistens

wc_a_157

21

3,209,605

41.7

HOMD

Neisseria

bacilliformis

ATCC BAA-1200

13

2,470,575

60.2

HOMD

Neisseria

oralis

F0314

11

2,515,760

53.1

HOMD

Anaerococcus

octavius

NCTC9810

2

1,914,290

30.6

HOMD

Anaerococcus

octavius

UMB0119

18

1,979,036

30.7

HOMD

Corynebacterium

accolens

kpl1818

6

2,588,539

59.5

PROKKA

HOMD

Corynebacterium

accolens

kpl1859

3

2,547,767

59.6

HOMD

Corynebacterium

accolens

kpl1824

2

2,638,979

59.4

HOMD

Corynebacterium

accolens

kpl1818

6

2,588,539

59.5

HOMD

Corynebacterium

accolens

kpl2004

6

2,575,948

59.4

HOMD

Corynebacterium

accolens

kpl1855

8

2,512,083

59.7

HOMD

Corynebacterium

accolens

kpl1814

7

2,501,004

59.5

HOMD

Corynebacterium

accolens

kpl1996

3

2,576,022

59.3

HOMD

Corynebacterium

accolens

kpl1998

4

2,568,130

59.3

HOMD

Corynebacterium

accolens

kpl1986

1

2,568,149

59.4

HOMD

Neisseria

sp. HMT 020

F0370

118

2,358,903

58.7

HOMD

Streptococcus

vestibularis

F0396

11

2,022,289

39.6

HOMD

Streptococcus

vestibularis

ATCC 49124

21

1,872,773

40.6

HOMD

Lautropia

mirabilis

ATCC 51599

8

3,151,925

65.7

HOMD

Delftia

acidovorans

2167 DR66

1

6,777,958

66.6

HOMD

Delftia

acidovorans

CCUG 15835

55

6,823,175

66.7

HOMD

Delftia

acidovorans

SPH-1, ATCC15668

1

6,767,514

66.5

HOMD

Delftia

acidovorans

CCUG 274B

79

6,953,182

66.7

HOMD

Schlegelella

thermodepolymerans

DSM 15344

48

3,830,945

70.3

HOMD

Schlegelella

thermodepolymerans

DSM 15344

28

3,835,611

70.3

HOMD

Schlegelella

thermodepolymerans

DSM 15264

35

4,033,925

70.2

HOMD

Cupriavidus

gilardii

cr3

2

5,578,743

67.6

HOMD

Treponema

vincentii

F0403/N9

3

2,693,493

45.8

HOMD

Treponema

vincentii

ATCC 35580

79

2,514,590

45.7

HOMD

Corynebacterium

afermentans

lcdc880199

24

2,345,615

64.9

HOMD

Corynebacterium

amycolatum

hmsc055g02

45

2,410,671

58.9

HOMD

Corynebacterium

amycolatum

hmsc077c02

52

2,436,086

59.0

HOMD

Corynebacterium

amycolatum

hmsc064e10

10

2,460,166

58.8

HOMD

Corynebacterium

amycolatum

hmsc063a05

24

2,444,943

58.7

HOMD

Corynebacterium

amycolatum

hmsc072b09

64

2,484,283

58.9

HOMD

Corynebacterium

amycolatum

hmsc061h03

47

2,482,958

58.8

HOMD

Corynebacterium

amycolatum

hmsc063g05

37

2,409,263

58.9

HOMD

Corynebacterium

amycolatum

hmsc074c04

15

2,442,160

58.8

HOMD

Corynebacterium

amycolatum

atcc_6931

1

2,471,920

58.6

HOMD

Corynebacterium

amycolatum

hmsc074c11

23

2,456,959

58.7

HOMD

Corynebacterium

amycolatum

hmsc064h12

44

2,458,128

58.9

HOMD

Corynebacterium

amycolatum

hmsc063f04

35

2,425,142

58.9

HOMD

Corynebacterium

amycolatum

hmsc077g07

37

2,430,573

58.8

HOMD

Corynebacterium

amycolatum

hmsc064e07

40

2,450,517

59.0

HOMD

Corynebacterium

amycolatum

hmsc11h10

20

2,433,278

58.7

HOMD

Corynebacterium

amycolatum

hmsc064e08

16

2,436,100

59.0

HOMD

Corynebacterium

amycolatum

hmsc072b08

43

2,489,149

59.0

HOMD

Corynebacterium

amycolatum

hmsc070b05

46

2,417,058

59.0

HOMD

Corynebacterium

amycolatum

hmsc065h09

36

2,493,204

59.0

HOMD

Corynebacterium

amycolatum

hmsc14b06

55

2,562,236

60.1

HOMD

Corynebacterium

amycolatum

hmsc074c05

25

2,409,687

58.9

HOMD

Corynebacterium

amycolatum

hmsc077g01

59

2,461,778

58.8

HOMD

Corynebacterium

amycolatum

hmsc14h10

48

2,490,969

58.9

HOMD

Corynebacterium

amycolatum

hfh0082

1

2,493,224

59.2

HOMD

Corynebacterium

amycolatum

hmsc073h12

19

2,473,368

58.7

HOMD

Corynebacterium

appendicis

CIP_107643,DSM_44531

32

2,248,056

64.3

HOMD

Corynebacterium

aurimucosum

hmsc056f09

99

2,758,830

61.2

HOMD

Corynebacterium

aurimucosum

hmsc066c02

54

2,631,066

60.7

HOMD

Corynebacterium

aurimucosum

hmsc068g04

67

2,793,519

61.0

HOMD

Corynebacterium

aurimucosum

hmsc074e01

54

2,654,499

60.9

HOMD

Corynebacterium

aurimucosum

hmsc074h12

76

2,810,041

61.0

HOMD

Corynebacterium

aurimucosum

hmsc05d03

43

2,642,799

60.6

PROKKA

HOMD

Corynebacterium

aurimucosum

hmsc078a10

53

2,761,821

60.9

HOMD

Corynebacterium

aurimucosum

hmsc070e08

79

2,725,857

61.1

HOMD

Corynebacterium

aurimucosum

hmsc078c09

72

2,669,014

61.1

HOMD

Corynebacterium

aurimucosum

hmsc069e04

90

2,642,255

60.7

HOMD

Corynebacterium

aurimucosum

hmsc072a04

97

2,804,419

61.1

HOMD

Corynebacterium

aurimucosum

hmsc062a03

66

2,606,195

60.6

HOMD

Corynebacterium

aurimucosum

hmsc036d02

61

2,639,433

60.9

HOMD

Corynebacterium

aurimucosum

hmsc05d03

43

2,642,799

60.6

HOMD

Corynebacterium

aurimucosum

hmsc072a02

92

2,753,344

60.9

HOMD

Corynebacterium

aurimucosum

hmsc056e09

59

2,672,238

61.0

HOMD

Corynebacterium

aurimucosum

hmsc065d07

58

2,658,959

61.0

HOMD

Corynebacterium

aurimucosum

hmsc035e02

91

2,767,129

61.1

HOMD

Corynebacterium

aurimucosum

hmsc055a01

82

2,818,382

61.0

HOMD

Corynebacterium

aurimucosum

hmsc074c01

75

2,693,142

60.9

HOMD

Corynebacterium

aurimucosum

hmsc072d12

45

2,566,381

60.8

HOMD

Haemophilus

paraphrohaemolyticus

HK411

78

2,021,208

40.8

HOMD

Haemophilus

sp. HMT 036

F0629

1

1,805,716

38.4

HOMD

Haemophilus

sp. HMT 036

ccug_66565

18

1,926,945

38.3

HOMD

Stenotrophomonas

nitritireducens

DSM 12575

95

3,983,487

68.3

PROKKA

HOMD

Stenotrophomonas

nitritireducens

DSM 12575

95

3,983,487

68.3

HOMD

Olsenella

uli

DSM 7084, VPI, ATCC 49627

1

2,051,896

64.7

HOMD

Olsenella

uli

MSTE5

14

2,153,240

64.5

HOMD

Desulfobulbus

sp. HMT 041

Dsb3

210

736,505

57.9

HOMD

Desulfobulbus

sp. oral taxon 041

Dsb4

83

748,241

59.0

PROKKA

HOMD

Desulfobulbus

sp. oral taxon 041

Dsb1-5

384

1,876,126

58.8

PROKKA

HOMD

Desulfobulbus

sp. HMT 041

Dsb2

162

676,885

57.6

HOMD

Mogibacterium

timidum

ATCC 33093

30

1,806,210

44.3

HOMD

Mogibacterium

timidum

W9173

2

1,859,163

44.2

HOMD

Bacillus

clausii

KSM-K16

1

4,303,871

44.8

HOMD

Gemella

morbillorum

M424

18

1,752,918

31.1

HOMD

Corynebacterium

jeikeium

hmsc08a12

31

2,215,784

63.0

HOMD

Corynebacterium

jeikeium

fdaargos_328

1

2,650,792

58.7

PROKKA

HOMD

Corynebacterium

jeikeium

hmsc058e07

67

2,223,736

62.1

HOMD

Corynebacterium

kroppenstedtii

dsm_44385

1

2,446,804

57.5

HOMD

Corynebacterium

macginleyi

NML 080212

77

2,417,567

57.1

HOMD

Corynebacterium

macginleyi

NML 120205

40

2,349,818

57.2

HOMD

Corynebacterium

macginleyi

CCUG 32361

56

2,419,073

57.1

HOMD

Lactobacillus

vaginalis

ATCC 49540

112

1,877,332

42.9

HOMD

Corynebacterium

minutissimum

hmsc05e07

85

2,797,062

60.0

HOMD

Corynebacterium

minutissimum

atcc_23348

38

2,663,401

60.0

HOMD

Corynebacterium

pilbarense

hmsc08d02

30

2,418,743

60.8

PROKKA

HOMD

Corynebacterium

pilbarense

hmsc034a01

66

2,393,833

65.4

PROKKA

HOMD

Corynebacterium

pilbarense

hmsc034a01

66

2,393,833

65.4

HOMD

Corynebacterium

pilbarense

hmsc05h05

55

2,411,621

65.3

HOMD

Streptococcus

sp. HMT 056

F0418

1

1,943,250

39.5

HOMD

Streptococcus

oralis subsp. dentisani clade 058

F0407

22

1,848,904

41.2

HOMD

Streptococcus

oralis subsp. dentisani clade 058

F0407

22

1,848,904

41.2

HOMD

Corynebacterium

propinquum

DSM 44285

22

2,458,635

56.4

HOMD

Corynebacterium

pseudodiphtheriticum

kpl1995

1

2,313,371

55.4

HOMD

Corynebacterium

pseudodiphtheriticum

kpl1989

3

2,317,860

55.4

HOMD

Corynebacterium

pseudodiphtheriticum

kpl1995

1

2,313,371

55.4

PROKKA

HOMD

Corynebacterium

pseudodiphtheriticum

EPI_003_04_2554_SCH2473622

85

2,366,960

55.4

HOMD

Streptococcus

sp. HMT 061

F0704

1

1,765,730

39.5

HOMD

Corynebacterium

simulans

hmsc077b05

66

2,678,953

63.6

PROKKA

HOMD

Corynebacterium

simulans

hmsc06g04

40

2,627,043

59.1

HOMD

Corynebacterium

simulans

hmsc076d02

78

2,638,185

59.2

HOMD

Corynebacterium

simulans

hmsc036d03

62

2,652,130

59.1

HOMD

Corynebacterium

simulans

hmsc077d03

61

2,636,380

59.3

HOMD

Corynebacterium

simulans

hmsc08c04

41

2,657,712

59.1

HOMD

Corynebacterium

simulans

pes1

1

2,737,971

59.0

HOMD

Corynebacterium

simulans

hmsc071f07

61

2,574,878

59.4

HOMD

Corynebacterium

simulans

hmsc06d04

43

2,672,576

59.0

HOMD

Corynebacterium

singulare

hmsc078h07

89

2,768,062

59.8

HOMD

Corynebacterium

singulare

ibs_b52218

1

2,830,519

60.1

HOMD

Streptococcus

sp. oral taxon 064

W10853

--

--

--

PROKKA

NCBI

HOMD

Streptococcus

sp. HMT 064

W10853

3

2,013,158

41.3

HOMD

Streptococcus

sp. HMT 066

F0442

3

2,231,248

42.0

HOMD

Streptococcus

oralis subsp. tigurinus clade 070

F0441

1

2,000,650

41.7

HOMD

Streptococcus

sp. HMT 071

ATCC 15914

--

--

--

PROKKA

NCBI

HOMD

Streptococcus

oralis subsp. tigurinus clade 071

73H25AP, F0408

7

1,976,523

41.5

HOMD

Corynebacterium

striatum

hmsc05d08

85

2,812,770

59.3

HOMD

Corynebacterium

striatum

hmsc06c06

74

2,652,216

59.4

HOMD

Corynebacterium

striatum

kc_na_01

3

2,797,692

59.1

HOMD

Streptococcus

australis

ATCC 700641

6

2,129,953

42.5

HOMD

Staphylococcus

warneri

Lyso 2 2011

49

2,508,959

32.7

HOMD

Staphylococcus

warneri

Lyso 1 2011

52

2,489,589

32.7

HOMD

Staphylococcus

warneri

VCU121

183

2,459,386

32.5

HOMD

Staphylococcus

warneri

L37603

77

2,425,653

32.8

HOMD

Staphylococcus

warneri

SG1

9

2,560,716

32.7

HOMD

Corynebacterium

tuberculostearicum

kpl1860

8

2,484,887

58.5

HOMD

Corynebacterium

tuberculostearicum

kpl1821

7

2,470,873

58.7

HOMD

Corynebacterium

tuberculostearicum

sk141

37

2,372,261

60.0

HOMD

Corynebacterium

tuberculostearicum

kpl1856

6

2,465,753

58.7

HOMD

Corynebacterium

tuberculostearicum

kpl1817

10

2,453,143

58.6

HOMD

Corynebacterium

tuberculostearicum

og2

472

2,628,783

57.5

HOMD

Corynebacterium

tuberculostearicum

kpl1857

4

2,489,851

58.5

HOMD

Oribacterium

sp. HMT 078

F0262

12

2,676,554

54.7

HOMD

Oribacterium

sp. HMT 078

F0263

69

2,694,758

54.9

HOMD

Peptostreptococcaceae

sp. oral taxon 081

W5028

--

--

--

PROKKA

NCBI

HOMD

Peptostreptococcaceae [XI][G-7]

bacterium HMT 081

W5028

5

2,575,607

30.7

HOMD

Lachnoanaerobaculum

orale

F0431

96

2,945,844

37.8

HOMD

Lachnoanaerobaculum

sp. HMT 083

hmsc061h09

46

1,899,912

41.6

PROKKA

HOMD

Lachnoanaerobaculum

sp. HMT 083

MSX33

99

2,871,049

36.2

HOMD

Kocuria

palustris

mu14_1

1

2,854,447

70.5

HOMD

Micrococcus

luteus

nctc_2665

1

2,501,097

73.0

HOMD

Neisseria

weaveri

LMG 5135

46

2,183,368

49.0

HOMD

Neisseria

weaveri

ATCC 51223

40

2,125,582

49.0

HOMD

Shuttleworthia

satelles

DSM 14600, BAA-774, CCUG 45864

5

2,169,477

51.3

HOMD

Lachnospiraceae

sp. oral taxon 096

F0428

--

--

--

PROKKA

NCBI

HOMD

Lachnospiraceae

bacterium HMT 096

F0428

2

2,232,415

39.7

HOMD

Moraxella

nonliquefaciens

vt-16-12

89

2,150,536

43.1

PROKKA

HOMD

Moraxella

nonliquefaciens

ccug_60284

43

2,194,559

42.2

HOMD

Neisseria

macacae

atcc_33926

66

2,748,368

52.4

HOMD

Neisseria

perflava

CCH6-A12

279

3,783,369

68.7

HOMD

Neisseria

perflava

UMB0023

28

2,319,022

48.8

HOMD

Neisseria

perflava

CCH6-A12

--

--

--

PROKKA

NCBI

HOMD

Oribacterium

sp. HMT 102

W9097

2

2,527,423

54.7

HOMD

Oribacterium

sp. oral taxon 102

W9097

--

--

--

PROKKA

NCBI

HOMD

Paracoccus

yeei

fdaargos_252

8

4,829,607

67.1

HOMD

Peptostreptococcaceae [XI][G-1]

[Eubacterium] infirmum

ATCC 700433, NCTC 12940

413

408,875

40.1

NCBI

HOMD

Peptostreptococcaceae [XI][G-1]

[Eubacterium] infirmum

F0142

13

1,910,927

40.4

HOMD

Lachnoanaerobaculum

umeaense

F0167

70

3,288,100

35.9

HOMD

Oribacterium

asaccharolyticum

F0425

1

2,518,361

43.3

HOMD

Peptoniphilus

harei

hmsc075b08

37

1,896,022

34.3

HOMD

Peptoniphilus

harei

dnf00840

72

1,777,928

34.4

HOMD

Peptoniphilus

harei

acs_146_v_sch2b

32

1,836,030

34.4

HOMD

Parvimonas

sp. HMT 110

F0139

2

1,556,464

28.2

HOMD

Parvimonas

micra

A293

49

1,680,794

28.3

PROKKA

HOMD

Parvimonas

micra

ATCC 33270

16

1,703,872

28.7

HOMD

Peptostreptococcus

stomatis

DSM 17678, W2278

74

1,988,044

36.7

HOMD

Peptoniphilaceae [G-1]

bacterium HMT 113

W5053

129

2,088,253

37.2

HOMD

Cutibacterium

granulosum

DSM_20700

372

2,128,234

64.1

HOMD

Serratia

marcescens

rsc_14

1

5,127,030

59.6

HOMD

Staphylococcus

capitis

ayp1020

2

2,503,265

32.9

HOMD

Staphylococcus

cohnii

snuds_2

3

2,625,703

32.7

HOMD

Dialister

invisus

DSM 15470

1

1,895,960

45.5

HOMD

Staphylococcus

haemolyticus

s167

2

2,560,146

32.8

HOMD

Anaeroglobus

geminatus

F0357

57

1,798,854

49.1

HOMD

Megasphaera

micronuciformis

F0359

38

1,765,528

45.4

HOMD

Selenomonas

artemidis

DSM 19719

35

2,350,599

56.8

HOMD

Selenomonas

artemidis

F0399

34

2,210,307

57.3

HOMD

Selenomonas

flueggei

ATCC 43531

9

2,166,063

56.1

HOMD

Selenomonas

sp. oral taxon 126

W7667

--

--

--

PROKKA

NCBI

HOMD

Selenomonas

sp. HMT 126

W7667

1

2,886,041

57.6

HOMD

Staphylococcus

hominis

as3

15

1,983,631

31.7

HOMD

Staphylococcus

lugdunensis

fdaargos_143

1

2,613,879

34.0

HOMD

Selenomonas

noxia

F0398

13

2,113,402

55.8

HOMD

Selenomonas

noxia

ATCC 43541

21

2,054,993

56.2

HOMD

Mitsuokella

sp. HMT 131

W9106

25

2,313,357

56.6

HOMD

Selenomonas

sp. HMT 133

F0473

2

2,067,540

58.7

HOMD

Selenomonas

sp. HMT 136

F0591

2

2,458,072

56.6

HOMD

Selenomonas

sp. HMT 136

F0591

2

2,458,072

56.6

HOMD

Selenomonas

sp. HMT 137

F0430

15

2,475,066

56.7

HOMD

Selenomonas

sp. HMT 138

F0429

33

2,384,529

56.9

HOMD

Selenomonas

dianae

ATCC 43527

--

--

--

PROKKA

NCBI

HOMD

Staphylococcus

pasteuri

sp1

1

2,559,946

32.7

HOMD

Staphylococcus

pettenkoferi

fdaargos_288

1

2,502,360

38.9

HOMD

Selenomonas

sp. HMT 149

67H29BP, F0410

16

2,471,116

57.5

HOMD

Selenomonas

sputigena

ATCC 35185

6

2,559,453

57.2

HOMD

Streptococcus

thermophilus

jim_8232

1

1,929,905

38.9

HOMD

Klebsiella

aerogenes

kctc_2190

1

5,280,350

54.9

HOMD

Moraxella

lincolnii

ccug_9405

29

2,076,923

42.7

HOMD

Veillonellaceae[G-1]

sp. oral taxon 155

F0276

--

--

--

PROKKA

NCBI

HOMD

Veillonella

rogosae

F0412

21

2,176,752

39.0

HOMD

Veillonella

dispar

DORA_11

605

2,432,612

38.6

HOMD

Veillonella

dispar

ATCC 17748

3

2,118,767

38.9

HOMD

Veillonella

parvula

ACS-068-V-Sch12

23

2,152,140

38.5

HOMD

Veillonella

parvula

ATCC 17745

353

371,505

38.4

NCBI

HOMD

Veillonella

parvula

HSIVP1

1

2,177,985

39.5

HOMD

Veillonella

parvula

ATCC 17745

19

2,163,473

38.6

HOMD

Veillonella

parvula

DSM 2008, Te3, ATCC 10790, JCM 1297

1

2,132,142

38.6

HOMD

Catonella

morbi

ATCC 51271

8

3,479,204

37.2

HOMD

Actinomyces

sp. oral taxon 169

F0496

1

3,040,651

68.5

HOMD

Actinomyces

sp. oral taxon 169

F0496

--

--

--

PROKKA

NCBI

HOMD

Actinomyces

sp. HMT 170

F0386

76

3,135,144

67.8

HOMD

Actinomyces

sp. HMT 171

F0337

280

3,006,255

68.1

HOMD

Actinomyces

sp. HMT 171

F0337

1

3,097,489

68.1

HOMD

Actinomyces

sp. HMT 172

F0311

215

2,469,990

66.6

HOMD

Lawsonella

clevelandensis

x1698

1

1,915,154

58.6

HOMD

Actinomyces

sp. HMT 175

F0384

7

3,133,330

68.7

HOMD

Actinomyces

naeslundii

ATCC 12104

--

--

--

PROKKA

NCBI

HOMD

Actinomyces

naeslundii

str. Howell 279

243

3,114,341

67.9

HOMD

Actinomyces

naeslundii

MG1

1

3,042,856

68.5

NCBI

HOMD

Actinomyces

sp. HMT 178

F0338

43

2,817,106

71.5

HOMD

Actinomyces

timonensis

DSM 23838

4

2,932,944

71.4

HOMD

Actinomyces

sp. HMT 180

F0310

6

2,372,658

66.7

HOMD

Actinomyces

lingnae [Not Validly Published]

F0379

14

1,901,306

56.0

HOMD

Anoxybacillus

flavithermus

dsm_2641t

1

2,812,123

41.8

HOMD

Peptidiphaga

sp. HMT 183

F0552

73

2,366,015

67.8

HOMD

Corynebacterium

tuscaniense

DNF00037

82

2,227,780

59.6

HOMD

Microbacterium

ginsengisoli

DSM 18659

80

3,047,473

70.2

HOMD

Microbacterium

flavescens

F0373

7

3,168,064

69.3

HOMD

Peptoniphilus

sp. HMT 187

bv3c26

69

1,925,975

31.6

PROKKA

HOMD

Peptoniphilus

sp. HMT 187

hmsc062d09

70

1,883,002

34.2

HOMD

Rothia

aeria

F0184

32

2,603,188

56.7

HOMD

Rothia

aeria

F0474

50

2,584,293

56.7

HOMD

Arsenicicoccus

bolidensis

F0371

1

3,525,271

72.7

HOMD

Arsenicoccus

sp. oral taxon 190

F0371

--

--

--

PROKKA

NCBI

HOMD

Acidipropionibacterium

acidifaciens

F0233

334

3,017,605

70.4

HOMD

Acidipropionibacterium

acidifaciens

DSM 21887

85

3,043,901

70.6

HOMD

Propionibacteriaceae [G-2]

bacterium HMT 192

F0372

2

2,711,056

61.5

HOMD

Cutibacterium

sp. HMT 193

F0672

2

2,649,207

60.0

HOMD

Cutibacterium

sp. HMT 193

F0672

2

2,649,207

60.0

HOMD

Scardovia

wiggsiae

F0424

2

1,555,498

53.1

HOMD

Enhydrobacter

aerosaccus

cgmcc9176

33

2,855,818

43.4

HOMD

Kocuria

rhizophila

fdaargos_302

1

2,697,877

71.2

HOMD

Alloscardovia

omnicolens

F0580

16

1,791,870

46.7

HOMD

Alloscardovia

omnicolens

DSM 21503

43

1,847,146

46.7

HOMD

Atopobium

sp. HMT 199

F0494

2

1,665,560

52.0

HOMD

Fusobacterium

nucleatum subsp. vincentii

ChDC F8,KCOM 1231

1

2,038,535

27.1

HOMD

Fusobacterium

nucleatum subsp. vincentii

ATCC 49256

302

2,118,259

27.3

HOMD

Fusobacterium

nucleatum subsp. vincentii

3_1_36A2

1

2,268,272

27.1

HOMD

Fusobacterium

nucleatum subsp. vincentii

hmsc064b12

56

2,121,738

27.1

HOMD

Fusobacterium

nucleatum subsp. vincentii

3_1_27

3

2,190,228

27.1

HOMD

Fusobacterium

periodonticum

2_1_31

6

2,546,312

30.1

HOMD

Fusobacterium

periodonticum

ATCC 33693

53

2,615,003

28.7

HOMD

Fusobacterium

periodonticum

1_1_41FAA

31

2,479,455

28.6

HOMD

Fusobacterium

periodonticum

D10

150

2,574,015

31.7

HOMD

Fusobacterium

nucleatum subsp. polymorphum

hmsc064b11

119

2,401,628

27.0

HOMD

Fusobacterium

nucleatum subsp. polymorphum

obrc1

87

2,497,272

26.8

HOMD

Fusobacterium

nucleatum subsp. polymorphum

ChDC F306

3

2,622,370

26.8

HOMD

Fusobacterium

nucleatum subsp. polymorphum

F0401

2

2,514,030

27.0

HOMD

Fusobacterium

nucleatum subsp. polymorphum

NCTC10562

2

2,455,060

27.0

HOMD

Fusobacterium

nucleatum subsp. polymorphum

ATCC 10953

2

2,441,632

26.9

HOMD

Fusobacterium

nucleatum subsp. polymorphum

ChDC F319

3

2,481,490

27.0

HOMD

Fusobacterium

sp. HMT 203

w7671

1

2,126,947

27.8

HOMD

Fusobacterium

sp. HMT 203

cm22

87

2,438,137

26.7

HOMD

Fusobacterium

sp. oral taxon 203

W7671

--

--

--

PROKKA

NCBI

HOMD

Corynebacterium

sp. HMT 207

hmsc071b10

94

2,625,963

64.4

HOMD

Corynebacterium

sp. HMT 207

nml_150383

22

2,527,537

65.6

HOMD

Corynebacterium

sp. HMT 207

nml_120412

13

2,597,765

65.5

HOMD

Corynebacterium

sp. HMT 207

hmsc074a01

40

2,549,445

64.8

HOMD

Corynebacterium

bovis

DSM 20582

--

--

--

PROKKA

NCBI

HOMD

Corynebacterium

bovis

DSM 20582

503

2,522,962

72.6

HOMD

Acidovorax

ebreus

tpsy

1

3,796,573

66.8

HOMD

Acidovorax

caeni

R-24608

--

--

--

PROKKA

NCBI

HOMD

Acidovorax

caeni

R-24608

115

4,152,335

65.6

HOMD

Leptotrichia

sp. HMT 212

W10393

1

2,444,904

31.4

HOMD

Leptotrichia

hongkongensis

JMUB5056

2

2,284,180

29.9

HOMD

Leptotrichia

shahii

DSM 19757

20

2,144,606

29.5

HOMD

Leptotrichia

sp. HMT 215

W9775

54

2,308,492

31.5

HOMD

Acidovorax

temperans

ky4

141

4,475,784

62.9

HOMD

Leptotrichia

wadei

DSM 19758

64

2,316,529

29.3

HOMD

Leptotrichia

wadei

F0279

74

2,353,455

29.4

HOMD

Leptotrichia

sp. HMT 223

F0708

4

2,584,194

31.4

HOMD

Leptotrichia

hofstadii

F0254

10

2,456,453

30.9

HOMD

Leptotrichia

hofstadii

DSM 21651

18

2,560,738

30.7

HOMD

Leptotrichia

sp. HMT 225

F0581

174

2,400,083

29.7

HOMD

Arthrospira

platensis

paraca

268

6,501,886

44.3

HOMD

Staphylococcus

schleiferi

tscc54

1

2,528,077

35.9

HOMD

Brochothrix

thermosphacta

bth_7810

22

2,471,990

36.4

HOMD

Roseomonas

gilardii

u14_5

5

5,412,463

70.1

HOMD

Roseomonas

mucosa

au37

249

4,741,248

70.5

HOMD

Fusobacterium

massiliense

Marseille-P2749

6

1,809,170

27.3

HOMD

Fusobacterium

sp. HMT 248

hmsc073f01

221

3,501,669

29.5

PROKKA

HOMD

Fusobacterium

massiliense

Marseille-P2749

6

1,809,170

27.3

HOMD

Segetibacter

aerophilus

NBRC 106135

79

5,893,322

40.1

HOMD

Bacteroidaceae [G-1]

bacterium HMT 272

F0290

30

2,502,741

47.7

HOMD

Porphyromonas

endodontalis

ATCC 35406

37

2,064,508

47.5

HOMD

Bacteroidales [G-2]

bacterium HMT 274

F0058

10

2,113,539

43.3

HOMD

Porphyromonas

sp. HMT 278

W7784

38

2,158,216

55.9

HOMD

Porphyromonas

pasteri

F0450

51

2,265,201

55.5

HOMD

Acinetobacter

junii

65

1

3,378,307

38.6

HOMD

Porphyromonas

catoniae

F0037

18

2,101,485

51.0

HOMD

Porphyromonas

catoniae

ATCC 51270

25

2,040,170

51.0

HOMD

Tannerella

sp. HMT 286

isolate Cell 1/3

1,263

2,785,640

55.3

HOMD

Tannerella

sp. HMT 286

W11667

1

2,973,544

56.5

HOMD

Tannerella

sp. HMT 286

W11667

1

2,973,544

56.5

HOMD

Tannerella

sp. HMT 286

isolate Cell 6/7/9

1,291

3,476,954

55.2

HOMD

Tannerella

sp. HMT 286

W11666

1

3,013,600

56.4

HOMD

Tannerella

sp. HMT 286

isolate Cell 5

742

3,214,909

55.9

HOMD

Tannerella

sp. HMT 286

isolate Cell 2

501

3,038,315

56.2

HOMD

Tannerella

sp. HMT 286

isolate Cell 8/11

1,618

2,665,364

54.9

HOMD

Prevotella

oulorum

JCM 14966

138

2,827,758

46.8

HOMD

Prevotella

oulorum

F0390

16

2,805,893

47.1

HOMD

Prevotella

maculosa

DSM 19339

60

3,314,235

47.4

HOMD

Prevotella

maculosa

JCM 15638

133

3,296,416

47.4

HOMD

Prevotella

maculosa

OT 289, F0099

21

3,151,214

48.0

HOMD

Anaerococcus

sp. HMT 290

hmsc075b03

57

1,881,178

29.1

PROKKA

HOMD

Prevotella

denticola

F0289

1

2,937,589

50.4

HOMD

Prevotella

denticola

JCM 13449

82

3,111,749

50.0

HOMD

Prevotella

denticola

DNF00960

126

3,050,207

49.9

HOMD

Prevotella

denticola

CRIS 18C-A

121

3,177,783

49.9

HOMD

Prevotella

denticola

DSM 20614

57

3,056,806

50.1

HOMD

Acinetobacter

johnsonii

xbb1

9

4,081,329

41.1

HOMD

Prevotella

histicola

JCM 15637 = DNF00424

55

2,949,807

41.2

HOMD

Prevotella

histicola

F0411

17

2,992,428

41.3

HOMD

Prevotella

nanceiensis

F0039

2

2,480,269

37.5

HOMD

Alloprevotella

rava

F0323

30

2,593,873

45.6

HOMD

Alloprevotella

rava

F0020

404

361,550

44.5

NCBI

HOMD

Prevotella

pleuritidis

F0068

51

2,709,958

45.0

HOMD

Prevotella

sp. HMT 306

F0472

74

2,945,767

41.3

HOMD

Prevotella

salivae

F0493

32

3,099,908

41.7

HOMD

Prevotella

salivae

DSM 15606

40

3,274,581

43.8

HOMD

Prevotella

oris

F0302

18

3,251,636

43.9

HOMD

Prevotella

oris

C735

127

3,321,878

43.9

PROKKA

HOMD

Prevotella

oris

JCM 12252

94

3,077,999

43.8

HOMD

Prevotella

oris

DSM 18711

46

3,063,215

43.9

HOMD

Aerococcus

viridans

fdaargos_249

1

2,003,760

39.6

HOMD

Prevotella

sp. HMT 313

F0648

3

3,915,696

41.7

HOMD

Prevotella

sp. oral taxon 314

F0091

--

--

--

PROKKA

NCBI

HOMD

Prevotella

sp. HMT 314

F0091

132

3,193,725

41.4

HOMD

Haematobacter

missouriensis

h2381

97

4,323,477

64.2

HOMD

Prevotella

sp. HMT 317

F0108

61

4,099,098

48.4

HOMD

Capnocytophaga

sp. HMT 323

F0383

1

2,614,527

39.7

HOMD

Capnocytophaga

sp. HMT 324

F0483

63

2,739,607

39.4

HOMD

Capnocytophaga

granulosa

ATCC 51502

20

2,746,278

41.6

HOMD

Capnocytophaga

sp. HMT 326

F0382

127

3,218,123

38.6

HOMD

Corynebacterium

mastitidis

DSM 44356

--

--

--

PROKKA

NCBI

HOMD

Corynebacterium

mastitidis

DSM 44356

39

2,370,005

69.0

HOMD

Capnocytophaga

leadbetteri

F0087

141

2,536,778

41.9

HOMD

Micavibrio

aeruginosavorus

arl_13

1

2,481,983

54.7

HOMD

Staphylococcus

auricularis

DSM 20609

--

--

--

PROKKA

NCBI

HOMD

Staphylococcus

auricularis

DSM 20609

54

2,201,708

37.3

HOMD

Capnocytophaga

sp. HMT 332

F0381

103

2,656,035

38.5

HOMD

Corynebacterium

massiliense

DSM 45435

--

--

--

PROKKA

NCBI

HOMD

Corynebacterium

massiliense

DSM 45435

26

2,183,019

65.0

HOMD

Capnocytophaga

sp. HMT 335

F0486

38

2,545,989

39.6

HOMD

Capnocytophaga

sp. HMT 336

F0502

8

2,788,212

39.5

HOMD

Capnocytophaga

gingivalis

ATCC 33624

37

2,667,138

40.5

HOMD

Capnocytophaga

sp. HMT 338

F0234

29

2,548,422

38.4

HOMD

Janibacter

indicus

yfy001

1

3,401,189

71.2

HOMD

Brevibacterium

paucivorans

UMB1301

940

2,999,495

60.9

HOMD

Corynebacterium

coyleae

hmsc070h05

79

2,411,300

61.7

HOMD

Corynebacterium

coyleae

hmsc034b08

101

2,519,128

61.8

HOMD

Corynebacterium

coyleae

hmsc11d10

75

2,443,105

61.7

HOMD

Corynebacterium

coyleae

hmsc036e10

77

2,468,155

61.5

HOMD

Corynebacterium

coyleae

hmsc08f01

74

2,413,488

61.6

HOMD

Corynebacterium

coyleae

hmsc075d04

93

2,461,261

61.6

HOMD

Corynebacterium

coyleae

hmsc055d05

62

2,396,802

61.6

HOMD

Corynebacterium

coyleae

hmsc034e11

63

2,423,872

61.7

HOMD

Corynebacterium

coyleae

hmsc05c01

52

2,390,226

61.7

HOMD

Corynebacterium

coyleae

hmsc067d03

72

2,390,972

61.7

HOMD

Novosphingobium

panipatense

P5:ABC

99

5,735,120

64.7

HOMD

Novosphingobium

panipatense

P5:ABC

--

--

--

PROKKA

NCBI

HOMD

Achromobacter

xylosoxidans

AXX-A

13

6,860,805

68.9

HOMD

Achromobacter

xylosoxidans

NH44784-1996

1

6,916,670

67.5

HOMD

Achromobacter

xylosoxidans

NBRC 15126 = ATCC 27061

1

6,683,584

67.5

HOMD

Achromobacter

xylosoxidans

C54

262

6,514,720

68.5

HOMD

Achromobacter

xylosoxidans

A8

3

7,359,146

65.8

HOMD

Achromobacter

xylosoxidans

X02736

381

7,043,207

67.2

PROKKA

HOMD

Pseudomonas

luteola

PL_348

65

5,418,185

55.4

HOMD

Pseudomonas

luteola

XLDN4-9

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 346

SAG2

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 346

SAG3

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 346

SAG1

--

--

--

PROKKA

NCBI

HOMD

Candidate division TM7 single-cell isolate

TM7a

--

1,780

1,691,166

34.3

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 348

TM7b

85

112,753

37.0

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 348

SAG1

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 348

SAG2

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 348

SAG3

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 348

TM7c

129

474,179

39.1

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 348

SAG4

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 349

SAG1

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-2]

bacterium HMT 350

SAG1

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-3]

bacterium HMT 351

SAG1

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-3]

bacterium HMT 351

SAG2

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-3]

bacterium HMT 351

SAG3

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-3]

bacterium HMT 351

SAG4

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 352

SAG8

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 352

SAG1

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 352

SAG5

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 352

SAG2

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 352

SAG7

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 352

SAG3

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 352

SAG6

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 352

SAG4

--

--

--

PROKKA

NCBI

HOMD

Saccharibacteria (TM7) [G-1]

bacterium HMT 353

SAG1

--

--

--

PROKKA

NCBI

HOMD

Dermabacter

hominis

1368

26

2,510,630

62.8

HOMD

Dermabacter

hominis

WMB0490

17

2,281,917

62.9

HOMD

Saccharibacteria (TM7) [G-5]

bacterium HMT 356

SAG1

--

--

--

PROKKA

NCBI

HOMD

Pyramidobacter

piscolens

W5455

--

--

--

PROKKA

NCBI

HOMD

Pyramidobacter

piscolens

W5455, DSM 21147, CCUG 55836, F0317

140

2,562,014

59.8

HOMD

Pyramidobacter

piscolens

W5455 (TFI)

385

276,552

59.5

NCBI

HOMD

Pyramidobacter

piscolens

W5455 (TFI-JCVI)

852

615,414

60.9

NCBI

HOMD

Pyramidobacter

piscolens

W5455 (JCVI)

467

338,862

62.0

NCBI

HOMD

Fretibacterium

fastidiosum

SGP1

1

2,728,333

66.7

HOMD

Dietzia

cinnamea

p4

428

3,555,295

71.0

HOMD

Dietzia

sp. HMT 368

W5195

3

3,679,573

70.8

HOMD

Dietzia

sp. oral taxon 368

W5195

--

--

--

PROKKA

NCBI

HOMD

Fusobacterium

sp. HMT 370

F0437

133

2,093,299

27.9

HOMD

Peptoniphilus

sp. HMT 375

F0436

1

1,950,550

41.4

HOMD

Prevotella

sp. HMT 376

F0043

3

3,017,058

49.5

HOMD

Prevotella

sp. oral taxon 376

F0043

--

--

--

PROKKA

NCBI

HOMD

Peptostreptococcaceae [XI][G-7]

[Eubacterium] yurii subsps. yurii & margaretiae

ATCC 43715

14

2,511,030

33.5

HOMD

Prevotella

micans

F0438

12

2,487,950

46.0

HOMD

Prevotella

micans

JCM 16134

108

2,426,740

45.5

HOMD

Prevotella

micans

DSM 21469

50

2,435,292

45.5

HOMD

Capnocytophaga

sp. HMT 380

F0488

76

2,634,285

39.5

HOMD

Peptoniphilus

sp. HMT 386

F0131

11

1,569,385

31.8

HOMD

Abiotrophia

defectiva

ATCC 49176

4

2,043,439

47.0

HOMD

Parvimonas

sp. HMT 393

F0440

5

1,483,165

28.2

HOMD

Streptococcus

oralis subsp. dentisani clade 398

F0392

2

1,916,998

41.2

HOMD

Streptococcus

oralis subsp. dentisani clade 398

SK95

66

2,020,730

40.8

HOMD

Streptococcus

parasanguinis clade 411

F0405

16

2,050,302

42.0

HOMD

Capnocytophaga

sp. HMT 412

F0487

62

2,590,781

39.5

HOMD

Actinomyces

sp. HMT 414

F0588

1

3,836,419

71.9

HOMD

Atopobium

sp. oral taxon 416

W9116

--

--

--

PROKKA

NCBI

HOMD

Leptotrichia

sp. HMT 417

F0703

5

2,528,148

29.9

HOMD

Lactobacillus

parafarraginis

F0439

165

2,854,910

45.7

HOMD

Stomatobaculum

longum

ACC2

5

2,313,632

55.2