Species: Treponema sp._HMT_268
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BM - Buccal Mucosa
KG - Keratinized Gingiva
HP - Hard Palate
TD - Tongue Dorsum
PT - Palatine Tonsils
TH - Throat
SV - Saliva
SupP - Supra-gingival Plaque
SubP - Sub-gingival Plaque
NS - Nasal
ST - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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No Notes
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 0.068 | 0.028 | 0.000 | 0.001 | 0.000 | 0.001 | 0.000 | 0.001 | 0.000 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.222 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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Stdev | 0.215 | 0.145 | 0.000 | 0.006 | 0.002 | 0.006 | 0.000 | 0.003 | 0.000 | 0.000 |
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Prev | 23.377 | 7.792 | 0.000 | 3.896 | 1.299 | 5.195 | 0.000 | 2.597 | 0.000 | 0.000 |
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Notes:
Reads equally close to T. socranskii, T. sp. HMT 268, and T. sp. HMT 269 were assigned one-third to each taxon.
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 0.297 | 0.129 | 0.000 | 0.009 | 0.003 | 0.027 | 0.010 | 0.027 | 0.003 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.848 | 0.392 | 0.000 | 0.016 | 0.006 | 0.073 | 0.023 | 0.069 | 0.010 | 0.000 |
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Stdev | 0.401 | 0.293 | 0.002 | 0.056 | 0.016 | 0.044 | 0.033 | 0.065 | 0.010 | 0.000 |
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Prev | 73.649 | 62.838 | 3.378 | 25.676 | 10.811 | 56.081 | 30.405 | 45.946 | 18.919 | 0.000 |
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From: Dewhirst 35x9 data (not published yet)
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No Notes
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | NS |
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Avg | 0.011 | 0.018 | 0.000 | 0.002 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.037 | 0.054 | 0.000 | 0.003 | 0.000 | 0.000 | 0.000 | 0.001 | 0.000 | 0.000 |
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Stdev | 0.031 | 0.044 | 0.002 | 0.005 | 0.002 | 0.001 | 0.000 | 0.002 | 0.000 | 0.000 |
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Prev | 48.571 | 35.294 | 2.778 | 11.765 | 7.143 | 8.333 | 3.030 | 12.903 | 0.000 | 0.000 |
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