HOMD.org AMR Data:: All HOMD Data; Date: 2026-10-09
genome_id	protein_id	element_symbol	element_name	scope	type	subtype	class	subclass	method	target_length	ref_seq_length	pct_cov_of_ref	pct_ident_to_ref	align_length	closest_ref_acc	closest_ref_name	hmm_acc	hmm_description	region	start	end
GCA_003044985.1	GCA_003044985.1_00522	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	POXS01000002.1	81022	81837
GCA_003044985.1	GCA_003044985.1_01043	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	88.21	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	POXS01000005.1	6528	8006
GCA_031296615.1	GCA_031296615.1_00275	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	272	284	96.13	56.41	273	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPFB010000001.1	341272	342090
GCA_026057535.1	GCA_026057535.1_00537	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	97.68	49.83	303	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP110415.1	533117	534016
GCA_026057535.1	GCA_026057535.1_02584	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	309	147	93.88	44.20	138	ABG05788.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP110415.1	2740514	2741443
GCA_026057535.1	GCA_026057535.1_03662	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	276	262	100.00	100.00	262	WP_001206315.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	CP110415.1	3882879	3883709
GCA_026057535.1	GCA_026057535.1_03666	aac(3)-I	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	158	156	91.03	66.90	142	WP_034006142.1	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP110415.1	3887000	3887476
GCA_016028295.1	GCA_016028295.1_00252	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP065712.1	267842	268237
GCA_016028295.1	GCA_016028295.1_00253	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.83	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP065712.1	268255	269544
GCA_016028295.1	GCA_016028295.1_00254	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	105	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP065712.1	269541	269858
GCA_022486245.1	GCA_022486245.1_00004	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKVFX010000010.1	2461	4467
GCA_022486245.1	GCA_022486245.1_00005	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JAKVFX010000010.1	4567	6324
GCA_022486245.1	GCA_022486245.1_00006	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JAKVFX010000010.1	6324	6695
GCA_022486245.1	GCA_022486245.1_00154	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKVFX010000014.1	2651	4117
GCA_022486245.1	GCA_022486245.1_00157	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKVFX010000014.1	5918	6298
GCA_022486245.1	GCA_022486245.1_00158	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKVFX010000014.1	6288	8045
GCA_022486245.1	GCA_022486245.1_00159	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKVFX010000014.1	8152	8997
GCA_022486245.1	GCA_022486245.1_00169	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	98.05	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JAKVFX010000016.1	1913	2530
GCA_022486245.1	GCA_022486245.1_00173	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAKVFX010000018.1	185	1624
GCA_022486245.1	GCA_022486245.1_00177	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAKVFX010000019.1	529	1014
GCA_022486245.1	GCA_022486245.1_00479	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	139	99.28	75.36	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKVFX010000001.1	305040	305456
GCA_022486245.1	GCA_022486245.1_01086	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAKVFX010000001.1	918533	918847
GCA_022486245.1	GCA_022486245.1_01087	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.90	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFX010000001.1	918847	920136
GCA_022486245.1	GCA_022486245.1_01088	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVFX010000001.1	920154	920549
GCA_022486245.1	GCA_022486245.1_02037	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.19	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFX010000005.1	44834	46126
GCA_022486245.1	GCA_022486245.1_02118	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFX010000005.1	118701	119993
GCA_022486245.1	GCA_022486245.1_02119	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVFX010000005.1	120011	120403
GCA_001718835.1	GCA_001718835.1_00767	tet(64)	tetracycline efflux MFS transporter Tet(64)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	396	396	100.00	91.16	396	WP_124470450.1	tetracycline efflux MFS transporter Tet(64)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP013443.1	800720	801910
GCA_001718835.1	GCA_001718835.1_01130	norM	multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	462	462	98.92	92.78	457	AAG27731.1	multidrug efflux MATE transporter NorM	NA	NA	CP013443.1	1163068	1164456
GCA_001718835.1	GCA_001718835.1_03795	blaOXA	OXA-1043 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	270	268	100.00	78.07	269	WP_077021671.1	OXA-1043 family class D beta-lactamase	NF040600.1	OXA-1043 family class D beta-lactamase	CP013444.1	267716	268528
GCA_001718835.1	GCA_001718835.1_04773	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	298	294	99.32	58.84	294	WP_025370306.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP013444.1	1392943	1393839
GCA_001718835.1	GCA_001718835.1_05796	blaPEN-H	PEN-H family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	297	297	100.00	91.25	297	WP_029226214.1	PEN-H family class A beta-lactamase	NF000320.3	PEN family class A beta-lactamase, Bcc-type	CP013444.1	2591841	2592734
GCA_001718835.1	GCA_001718835.1_05877	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	391	408	92.16	55.29	378	WP_367187976.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP013444.1	2680957	2682132
GCA_024788785.1	GCA_024788785.1_01118	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUSX010000001.1	1176105	1178030
GCA_024788785.1	GCA_024788785.1_03611	cblA	CblA family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	296	296	100.00	98.99	296	WP_005827792.1	CblA family class A beta-lactamase	NF033098.1	CblA family class A beta-lactamase	JANUSX010000001.1	3694177	3695067
GCA_003942915.1	GCA_003942915.1_00049	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	402	399	100.00	90.73	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RJOD01000001.1	41779	42987
GCA_900454605.1	GCA_900454605.1_00814	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.85	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	UGTB01000004.1	859014	860492
GCA_903908965.1	GCA_903908965.1_00690	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	LR822044.1	678704	679921
GCA_903908965.1	GCA_903908965.1_00691	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	LR822044.1	680041	681504
GCA_002794335.1	GCA_002794335.1_02432	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	PGGD01000002.1	625175	626140
GCA_002794335.1	GCA_002794335.1_02437	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	PGGD01000002.1	630286	632211
GCA_009496795.1	GCA_009496795.1_01548	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIIV01000006.1	37660	38859
GCA_001808745.1	GCA_001808745.1_00003	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV794412.1	803	2020
GCA_001808745.1	GCA_001808745.1_00004	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV794412.1	2140	3603
GCA_001808745.1	GCA_001808745.1_01223	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.91	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	KV794425.1	19469	21193
GCA_001808745.1	GCA_001808745.1_01224	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.88	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	KV794425.1	21195	22931
GCA_030014045.1	GCA_030014045.1_00036	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	335	459	72.98	100.00	335	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NA	NA	CP118829.1	36244	37251
GCA_030014045.1	GCA_030014045.1_00048	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	PARTIALP	88	122	72.13	96.59	88	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP118829.1	47209	47475
GCA_030014045.1	GCA_030014045.1_00055	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP118829.1	54717	56723
GCA_030014045.1	GCA_030014045.1_00057	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	305	585	51.62	100.00	302	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP118829.1	57664	58581
GCA_030014045.1	GCA_030014045.1_00058	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP118829.1	58581	58952
GCA_030014045.1	GCA_030014045.1_00129	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP118829.1	129490	130779
GCA_030014045.1	GCA_030014045.1_00133	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP118829.1	132958	133305
GCA_030014045.1	GCA_030014045.1_00211	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP118829.1	215664	216092
GCA_030014045.1	GCA_030014045.1_01009	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP118829.1	944802	945443
GCA_030014045.1	GCA_030014045.1_01034	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP118829.1	969466	970311
GCA_030014045.1	GCA_030014045.1_01036	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	95.24	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP118829.1	972164	972544
GCA_015560745.1	GCA_015560745.1_00675	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JADMSI010000001.1	55510	55938
GCA_015560745.1	GCA_015560745.1_01166	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADMSI010000003.1	54497	55714
GCA_015560745.1	GCA_015560745.1_01167	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADMSI010000003.1	55834	57297
GCA_015560745.1	GCA_015560745.1_01871	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.84	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JADMSI010000008.1	55546	57282
GCA_015560745.1	GCA_015560745.1_01872	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JADMSI010000008.1	57284	59008
GCA_002988885.2	GCA_002988885.2_01334	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP116490.1	1336254	1337648
GCA_009717225.1	GCA_009717225.1_00305	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYD01000001.1	308514	309731
GCA_009717225.1	GCA_009717225.1_00306	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYD01000001.1	309851	311314
GCA_009717225.1	GCA_009717225.1_00311	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMYD01000001.1	313181	313609
GCA_000176775.1	GCA_000176775.1_01533	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_063856415.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	ADBR01000028.1	34839	36758
GCA_014931375.1	GCA_014931375.1_01086	blaTEM-30	inhibitor-resistant broad-spectrum class A beta-lactamase TEM-30	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_021561477.1	inhibitor-resistant broad-spectrum class A beta-lactamase TEM-30	NF000531.2	TEM family class A beta-lactamase	CP063117.1	1097233	1098093
GCA_014931375.1	GCA_014931375.1_01329	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP063117.1	1338396	1340036
GCA_019703715.1	GCA_019703715.1_01492	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018779.1	1514860	1516254
GCA_000477915.1	GCA_000477915.1_00128	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515712.1	133654	134508
GCA_001896045.1	GCA_001896045.1_01030	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP018136.1	947981	949180
GCA_001896045.1	GCA_001896045.1_01104	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP018136.1	1016122	1016550
GCA_025149525.1	GCA_025149525.1_01888	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALXTD010000004.1	20209	21282
GCA_025149525.1	GCA_025149525.1_01968	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALXTD010000004.1	114683	115972
GCA_025149525.1	GCA_025149525.1_01969	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALXTD010000004.1	115990	116391
GCA_025149525.1	GCA_025149525.1_02214	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALXTD010000005.1	60332	61621
GCA_025149525.1	GCA_025149525.1_02514	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALXTD010000009.1	17189	18034
GCA_025149525.1	GCA_025149525.1_02515	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.63	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALXTD010000009.1	18141	19898
GCA_025149525.1	GCA_025149525.1_02516	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALXTD010000009.1	19888	20268
GCA_023923185.1	GCA_023923185.1_01872	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	305	97.38	54.46	303	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP099471.1	1959098	1960018
GCA_029026905.1	GCA_029026905.1_02522	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	302	97.02	52.20	295	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP090445.1	2686700	2687605
GCA_029026905.1	GCA_029026905.1_02885	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	275	86.55	65.13	238	WP_117407753.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP090445.1	3091187	3091987
GCA_003494265.1	GCA_003494265.1_01699	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.12	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQIN01000011.1	66388	67782
GCA_024181665.1	GCA_024181665.1_00884	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	92.31	66.67	204	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP058668.1	975464	976111
GCA_900458895.2	GCA_900458895.2_02009	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	77.86	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR962863.1	1937002	1938294
GCA_001553685.1	GCA_001553685.1_01121	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP014264.1	1159448	1160665
GCA_001553685.1	GCA_001553685.1_01122	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP014264.1	1160785	1162248
GCA_001589145.1	GCA_001589145.1_00212	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LAYI01000001.1	219288	221207
GCA_001546395.1	GCA_001546395.1_00366	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KQ956514.1	130069	131988
GCA_000019025.1	GCA_000019025.1_01108	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP000921.1	1043863	1044291
GCA_000019025.1	GCA_000019025.1_01241	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP000921.1	1173991	1175190
GCA_000019025.1	GCA_000019025.1_01902	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP000921.1	1797283	1799202
GCA_000019025.1	GCA_000019025.1_01907	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP000921.1	1800928	1802391
GCA_000019025.1	GCA_000019025.1_01908	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP000921.1	1802511	1803728
GCA_037897555.1	GCA_037897555.1_00336	blaOXA	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	261	261	100.00	99.62	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	CP077108.1	338423	339208
GCA_018206295.1	GCA_018206295.1_00295	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	332	641	51.79	99.70	332	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	JADRGH010000109.1	35	1033
GCA_018206295.1	GCA_018206295.1_00296	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	332	641	51.79	99.10	332	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	JADRGH010000110.1	35	1033
GCA_018206295.1	GCA_018206295.1_02814	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	362	408	88.73	98.62	362	WP_012102963.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADRGH010000093.1	1453	2541
GCA_000017405.1	GCA_000017405.1_00408	bepE	multidrug efflux RND transporter permease subunit BepE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1049	1051	99.71	94.37	1048	AAN29241.1	multidrug efflux RND transporter permease subunit BepE	NA	NA	CP000758.1	395471	398620
GCA_000017405.1	GCA_000017405.1_01404	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	266	266	100.00	74.06	266	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP000758.1	1396392	1397192
GCA_000017405.1	GCA_000017405.1_01420	cml	Cml family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	397	397	100.00	92.19	397	WP_061345584.1	Cml family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP000758.1	1412804	1413997
GCA_000017405.1	GCA_000017405.1_02066	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	395	391	97.95	55.84	385	WP_063856077.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP000758.1	2032658	2033845
GCA_000017405.1	GCA_000017405.1_02765	blaOCH	OCH family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	390	390	100.00	99.74	390	WP_063860890.1	extended-spectrum class C beta-lactamase OCH-3	NF000264.2	OCH family extended-spectrum class C beta-lactamase	CP000758.1	2711702	2712874
GCA_000017405.1	GCA_000017405.1_03365	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	745	561	82.17	48.30	470	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP000759.1	487026	489263
GCA_000017405.1	GCA_000017405.1_04742	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	95.72	304	APX31172.1	heat resistance protein YfdX1	NA	NA	CP000760.1	15981	16895
GCA_000017405.1	GCA_000017405.1_04743	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	91.19	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP000760.1	16998	17885
GCA_030316785.1	GCA_030316785.1_01199	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JASZXY010000003.1	89959	90696
GCA_024104895.1	GCA_024104895.1_01561	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTV010000003.1	233889	234299
GCA_003474825.1	GCA_003474825.1_00497	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	QRPF01000012.1	12615	13109
GCA_003474825.1	GCA_003474825.1_00556	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	QRPF01000017.1	5564	6301
GCA_018381075.1	GCA_018381075.1_00807	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAGZSM010000010.1	30852	32492
GCA_018381075.1	GCA_018381075.1_01485	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	38.52	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAGZSM010000025.1	14487	14888
GCA_023167545.1	GCA_023167545.1_01186	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AP014647.1	1183775	1185694
GCA_023712675.1	GCA_023712675.1_00065	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAMAXR010000011.1	15016	15861
GCA_023712675.1	GCA_023712675.1_00066	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAMAXR010000011.1	15968	17725
GCA_023712675.1	GCA_023712675.1_00067	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAMAXR010000011.1	17715	18095
GCA_023712675.1	GCA_023712675.1_00070	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAMAXR010000011.1	19886	20446
GCA_023712675.1	GCA_023712675.1_00071	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAMAXR010000011.1	20630	22174
GCA_023712675.1	GCA_023712675.1_01459	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAMAXR010000002.1	141925	143217
GCA_023712675.1	GCA_023712675.1_02452	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAMAXR010000007.1	36937	38229
GCA_023712675.1	GCA_023712675.1_02456	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAMAXR010000007.1	41912	42259
GCA_023110325.1	GCA_023110325.1_00301	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDVY010000001.1	172868	174085
GCA_023110325.1	GCA_023110325.1_00302	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDVY010000001.1	174205	175668
GCA_023110325.1	GCA_023110325.1_01423	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALDVY010000004.1	49336	51255
GCA_021367725.1	GCA_021367725.1_00991	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCOB010000003.1	56697	57989
GCA_021367725.1	GCA_021367725.1_02346	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCOB010000014.1	33875	35164
GCA_021367725.1	GCA_021367725.1_02347	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHCOB010000014.1	35182	35583
GCA_900759775.1	GCA_900759775.1_00420	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAAEWP010000021.1	52110	54029
GCA_900759775.1	GCA_900759775.1_01380	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CAAEWP010000029.1	1026	1886
GCA_900759775.1	GCA_900759775.1_01573	senB	enterotoxin production-related protein TieB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	391	391	100.00	100.00	391	AAZ89288.1	enterotoxin production-related protein TieB	NA	NA	CAAEWP010000042.1	6687	7862
GCA_015274095.1	GCA_015274095.1_00556	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACGPY010000002.1	4946	5347
GCA_015274095.1	GCA_015274095.1_00557	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPY010000002.1	5365	6654
GCA_015274095.1	GCA_015274095.1_00668	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACGPY010000002.1	148160	149233
GCA_015274095.1	GCA_015274095.1_01881	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPY010000007.1	77533	78822
GCA_015274095.1	GCA_015274095.1_02563	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGPY010000017.1	7588	8433
GCA_015274095.1	GCA_015274095.1_02564	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGPY010000017.1	8540	10297
GCA_015274095.1	GCA_015274095.1_02565	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGPY010000017.1	10287	10667
GCA_015274095.1	GCA_015274095.1_02568	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACGPY010000017.1	12458	13018
GCA_015274095.1	GCA_015274095.1_02569	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACGPY010000017.1	13202	14746
GCA_015274095.1	GCA_015274095.1_02587	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JACGPY010000019.1	383	1369
GCA_015274095.1	GCA_015274095.1_02588	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACGPY010000019.1	1469	3475
GCA_015274095.1	GCA_015274095.1_02615	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACGPY010000025.1	1183	1917
GCA_015274095.1	GCA_015274095.1_02617	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JACGPY010000026.1	400	1839
GCA_015274095.1	GCA_015274095.1_02618	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGPY010000027.1	136	621
GCA_001812885.1	GCA_001812885.1_01295	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV810813.1	331004	332923
GCA_014338545.1	GCA_014338545.1_00393	aadD2	aminoglycoside O-nucleotidyltransferase ANT(4)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	BLASTP	256	256	100.00	94.14	256	WP_035202393.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ib	NF000079.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ib	CP031128.1	420369	421139
GCA_014338545.1	GCA_014338545.1_00395	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	584	593	98.65	33.61	595	WP_012705551.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	CP031128.1	421623	423377
GCA_014338545.1	GCA_014338545.1_00396	blaBCL	BCL family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	301	301	100.00	96.68	301	WP_065825670.1	class A beta-lactamase BCL-1	NF033060.0	BCL family class A beta-lactamase	CP031128.1	423553	424458
GCA_014338545.1	GCA_014338545.1_01435	erm(34)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(34)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN	EXACTP	281	281	100.00	100.00	281	WP_063844504.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(34)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP031128.1	1470607	1471452
GCA_014338545.1	GCA_014338545.1_04079	vanR	vancomycin resistance response regulator transcription factor, VanR-F/VanR-M family	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	233	232	100.00	79.83	233	WP_063856726.1	vancomycin resistance response regulator transcription factor, VanR-F/VanR-M family	NF033120.0	vancomycin resistance response regulator transcription factor, VanR-F/VanR-M family	CP031128.1	3948971	3949672
GCA_014338545.1	GCA_014338545.1_04183	clbB	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbB	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	BLASTP	350	350	100.00	97.14	350	WP_011245929.1	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbB	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	CP031128.1	4070909	4071961
GCA_014338545.1	GCA_014338545.1_04341	drcB	daptomycin efflux ABC transporter permease DrcB	plus	AMR	AMR	NA	NA	BLASTP	641	641	100.00	97.19	641	XSG12257.1	daptomycin efflux ABC transporter permease DrcB	NA	NA	CP031128.1	4233376	4235301
GCA_014338545.1	GCA_014338545.1_04342	drcA	daptomycin efflux ABC transporter ATP-binding protein DrcA	plus	AMR	AMR	NA	NA	BLASTP	255	255	100.00	98.04	255	XSG12260.1	daptomycin efflux ABC transporter ATP-binding protein DrcA	NA	NA	CP031128.1	4235288	4236055
GCA_014338545.1	GCA_014338545.1_04343	drcR	daptomycin efflux response regulator transcription factor DrcR	plus	AMR	AMR	NA	NA	BLASTP	223	223	100.00	99.10	223	XSG12259.1	daptomycin efflux response regulator transcription factor DrcR	NA	NA	CP031128.1	4236263	4236934
GCA_014338545.1	GCA_014338545.1_04344	drcS	daptomycin efflux sensor histidine kinase DrcS	plus	AMR	AMR	NA	NA	BLASTP	341	341	100.00	95.01	341	XSG12258.1	daptomycin efflux sensor histidine kinase DrcS	NA	NA	CP031128.1	4236931	4237956
GCA_014338545.1	GCA_014338545.1_04446	ant(6)	aminoglycoside 6-nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	284	284	99.65	73.85	283	WP_003229862.1	aminoglycoside 6-nucleotidyltransferase	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP031128.1	4329578	4330432
GCA_900452265.1	GCA_900452265.1_00033	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	AAB09624.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	UGNM01000004.1	14360	14713
GCA_900452265.1	GCA_900452265.1_00034	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	98.33	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UGNM01000004.1	14761	15123
GCA_900452265.1	GCA_900452265.1_00035	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	98.97	583	AAB09626.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	UGNM01000004.1	15141	16892
GCA_900452265.1	GCA_900452265.1_00036	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.37	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	UGNM01000004.1	16941	18230
GCA_900452265.1	GCA_900452265.1_00037	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	99.29	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	UGNM01000004.1	18243	18668
GCA_900452265.1	GCA_900452265.1_00061	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	97.92	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	UGNM01000004.1	38548	38982
GCA_900452265.1	GCA_900452265.1_00062	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	98.93	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	UGNM01000004.1	39198	40598
GCA_900452265.1	GCA_900452265.1_00063	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	UGNM01000004.1	40595	41275
GCA_900452265.1	GCA_900452265.1_00064	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	BLASTP	309	309	100.00	99.68	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	UGNM01000004.1	41330	42259
GCA_900452265.1	GCA_900452265.1_00065	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	UGNM01000004.1	42264	42644
GCA_900452265.1	GCA_900452265.1_00066	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	99.66	296	CAA58526.1	copper-binding protein PcoB	NA	NA	UGNM01000004.1	42684	43580
GCA_900452265.1	GCA_900452265.1_00067	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	EXACTP	605	605	100.00	100.00	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	UGNM01000004.1	43580	45397
GCA_900452265.1	GCA_900452265.1_00071	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	94.85	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	UGNM01000004.1	47379	49826
GCA_900452265.1	GCA_900452265.1_00073	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	99.43	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	UGNM01000004.1	50480	53626
GCA_900452265.1	GCA_900452265.1_00074	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	98.14	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	UGNM01000004.1	53637	54929
GCA_900452265.1	GCA_900452265.1_00075	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	UGNM01000004.1	55043	55396
GCA_900452265.1	GCA_900452265.1_00076	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	461	461	100.00	100.00	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	UGNM01000004.1	55425	56810
GCA_900452265.1	GCA_900452265.1_00077	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	226	226	100.00	100.00	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	UGNM01000004.1	57000	57680
GCA_900452265.1	GCA_900452265.1_00078	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	491	491	100.00	98.98	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	UGNM01000004.1	57673	59148
GCA_900452265.1	GCA_900452265.1_00079	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	92.31	143	AAD11743.1	silver-binding protein SilE	NA	NA	UGNM01000004.1	59399	59830
GCA_900452265.1	GCA_900452265.1_00118	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.44	429	AAB42204.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	UGNM01000004.1	97099	98388
GCA_900452265.1	GCA_900452265.1_00119	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	142	141	100.00	91.49	141	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	UGNM01000004.1	98401	98829
GCA_900452265.1	GCA_900452265.1_00136	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	99.47	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	UGNM01000004.1	109336	109905
GCA_900452265.1	GCA_900452265.1_00137	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	931	949	97.89	99.14	929	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	UGNM01000004.1	110011	112806
GCA_900452265.1	GCA_900452265.1_01082	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	98.18	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	UGNM01000002.1	26948	27445
GCA_900452265.1	GCA_900452265.1_01083	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	571	571	100.00	98.07	571	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	UGNM01000002.1	27442	29157
GCA_900452265.1	GCA_900452265.1_01084	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	98.63	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	UGNM01000002.1	29161	29601
GCA_900452265.1	GCA_900452265.1_01086	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	97.54	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	UGNM01000002.1	30816	31427
GCA_900452265.1	GCA_900452265.1_01087	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	97.97	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	UGNM01000002.1	31517	32404
GCA_900452265.1	GCA_900452265.1_01088	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.67	304	APX31172.1	heat resistance protein YfdX1	NA	NA	UGNM01000002.1	32507	33421
GCA_900452265.1	GCA_900452265.1_01089	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	EXACTP	152	152	100.00	100.00	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	UGNM01000002.1	33444	33902
GCA_900452265.1	GCA_900452265.1_01092	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	99.47	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	UGNM01000002.1	36047	38896
GCA_900452265.1	GCA_900452265.1_01093	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	98.94	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	UGNM01000002.1	39002	39571
GCA_900452265.1	GCA_900452265.1_01158	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	731	100.00	82.63	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	UGNM01000002.1	106739	108937
GCA_900452265.1	GCA_900452265.1_01830	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	142	139	100.00	80.58	139	WP_004857515.1	FosA family fosfomycin resistance glutathione transferase	NF000221.4	FosA family fosfomycin resistance glutathione transferase	UGNM01000002.1	815271	815699
GCA_900452265.1	GCA_900452265.1_02322	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	90.17	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	UGNM01000001.1	44804	45697
GCA_900452265.1	GCA_900452265.1_02642	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	142	141	99.29	87.86	140	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	UGNM01000001.1	375187	375615
GCA_900452265.1	GCA_900452265.1_03782	blaCTX-M-115	extended-spectrum class A beta-lactamase CTX-M-115	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_035895532.1	extended-spectrum class A beta-lactamase CTX-M-115	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	UGNM01000001.1	1542036	1542911
GCA_001647915.1	GCA_001647915.1_00122	catA2	type A-2 chloramphenicol O-acetyltransferase CatII	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	213	213	100.00	100.00	213	WP_011751353.1	type A-2 chloramphenicol O-acetyltransferase CatII	NF000491.1	type A chloramphenicol O-acetyltransferase	CP015434.1	117884	118525
GCA_001647915.1	GCA_001647915.1_00129	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089068.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CP015434.1	123212	124417
GCA_001647915.1	GCA_001647915.1_00169	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP015434.1	153049	154689
GCA_015262395.1	GCA_015262395.1_00710	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZSX010000001.1	7134	8324
GCA_015262395.1	GCA_015262395.1_01807	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JABZSX010000062.1	2224	4149
GCA_003570855.1	GCA_003570855.1_01299	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.28	639	WP_011860841.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	QWKV01000001.1	1288276	1290195
GCA_030546285.1	GCA_030546285.1_00520	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAUONQ010000001.1	177867	179084
GCA_030546285.1	GCA_030546285.1_00521	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAUONQ010000001.1	179204	180667
GCA_030546285.1	GCA_030546285.1_00527	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAUONQ010000001.1	184101	184529
GCA_030546285.1	GCA_030546285.1_01600	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAUONQ010000005.1	97604	99262
GCA_003625935.1	GCA_003625935.1_01506	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZGJ01000006.1	111968	112909
GCA_022014035.1	GCA_022014035.1_01199	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAENXY010000031.1	24734	26659
GCA_900475215.1	GCA_900475215.1_01606	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	99.26	63.70	135	WP_015741374.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	LS483372.1	1731441	1731851
GCA_900475215.1	GCA_900475215.1_02931	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	413	100.00	80.05	416	CAK15125.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	LS483372.1	3100765	3102006
GCA_900475215.1	GCA_900475215.1_03415	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	380	397	94.21	58.82	374	WP_104009838.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	LS483372.1	3640627	3641769
GCA_900475215.1	GCA_900475215.1_05048	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	256	267	96.25	56.81	257	WP_012479999.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	LS483372.1	5337746	5338516
GCA_001267395.1	GCA_001267395.1_00428	copB	copper/silver-translocating P-type ATPase CopB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	PARTIALP	526	745	64.03	82.44	484	AFM70730.1	copper/silver-translocating P-type ATPase CopB	NA	NA	CP012366.1	406463	408043
GCA_001267395.1	GCA_001267395.1_00841	aac(6)-Iih	aminoglycoside N-acetyltransferase AAC(6)-Iih	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ALLELEP	183	183	100.00	100.00	183	WP_005880220.1	aminoglycoside N-acetyltransferase AAC(6)-Iih	NF000165.3	aminoglycoside 6-N-acetyltransferase	CP012366.1	834210	834761
GCA_001267395.1	GCA_001267395.1_02978	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	99.15	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP012367.1	97146	99260
GCA_001267395.1	GCA_001267395.1_03005	tcrB	copper-translocating P-type ATPase TcrB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	700	710	100.00	97.32	710	AAL05407.1	copper-translocating P-type ATPase TcrB	NA	NA	CP012367.1	117359	119461
GCA_004015025.1	GCA_004015025.1_00254	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	295	303	88.45	40.67	268	WP_041881964.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP025826.1	292200	293087
GCA_020735565.1	GCA_020735565.1_01301	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP085926.1	1483167	1485092
GCA_020735565.1	GCA_020735565.1_02279	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP085926.1	2601356	2601682
GCA_020735565.1	GCA_020735565.1_02520	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP085926.1	2896884	2897849
GCA_000212515.2	GCA_000212515.2_02230	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AFGR01000001.1	886151	887941
GCA_020555745.1	GCA_020555745.1_01415	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAJCJI010000030.1	11310	12275
GCA_020555745.1	GCA_020555745.1_01634	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAJCJI010000038.1	21523	23448
GCA_020555745.1	GCA_020555745.1_02283	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAJCJI010000066.1	2308	2634
GCA_916049695.1	GCA_916049695.1_00492	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CAJZIH010000010.1	25164	25598
GCA_916049695.1	GCA_916049695.1_00493	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CAJZIH010000010.1	25670	26020
GCA_916049695.1	GCA_916049695.1_00494	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CAJZIH010000010.1	26033	26308
GCA_916049695.1	GCA_916049695.1_00495	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.57	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAJZIH010000010.1	26380	28065
GCA_916049695.1	GCA_916049695.1_00496	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CAJZIH010000010.1	28083	28448
GCA_916049695.1	GCA_916049695.1_00497	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	98.72	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CAJZIH010000010.1	28445	28681
GCA_019929865.1	GCA_019929865.1_00241	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHZQI010000001.1	261270	263165
GCA_902406345.1	GCA_902406345.1_00762	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.28	639	WP_011860841.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABPDK010000002.1	176923	178842
GCA_001808385.1	GCA_001808385.1_01495	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV793075.1	132235	133875
GCA_001698045.1	GCA_001698045.1_00681	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016644.1	685521	686900
GCA_001698045.1	GCA_001698045.1_01425	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016644.1	1448325	1449230
GCA_001698045.1	GCA_001698045.1_01554	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016644.1	1584637	1585875
GCA_001698045.1	GCA_001698045.1_01555	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016644.1	1586283	1586915
GCA_001698045.1	GCA_001698045.1_01557	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016644.1	1587740	1589308
GCA_001698045.1	GCA_001698045.1_01756	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016644.1	1798936	1800462
GCA_018128085.1	GCA_018128085.1_00832	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072363.1	968316	969506
GCA_018128085.1	GCA_018128085.1_01957	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP072364.1	3767	5692
GCA_018128085.1	GCA_018128085.1_03296	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP072364.1	1704921	1705886
GCA_022221305.1	GCA_022221305.1_00734	inhA2	M6 family metalloprotease immune inhibitor InhA2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	799	799	100.00	100.00	799	AAP24685.1	M6 family metalloprotease immune inhibitor InhA2	NA	NA	CP076219.1	675604	678003
GCA_022221305.1	GCA_022221305.1_00739	cerA	phospholipase CerA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	283	100.00	98.94	283	AAS39677.1	phospholipase CerA	NA	NA	CP076219.1	681868	682719
GCA_022221305.1	GCA_022221305.1_00740	sph	sphingomyelinase C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	333	338	98.52	99.70	333	AAP24691.1	sphingomyelinase C	NA	NA	CP076219.1	682793	683794
GCA_022221305.1	GCA_022221305.1_01330	inhA1	M6 family metalloprotease immune inhibitor InhA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	795	796	100.00	96.61	796	ADH05944.1	M6 family metalloprotease immune inhibitor InhA1	NA	NA	CP076219.1	1226707	1229094
GCA_022221305.1	GCA_022221305.1_01633	mphL	macrolide 2-phosphotransferase MphL	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	298	303	98.02	87.21	297	WP_002047670.1	macrolide 2-phosphotransferase MphL	NF038057.1	macrolide 2-phosphotransferase MphL	CP076219.1	1481569	1482465
GCA_022221305.1	GCA_022221305.1_01935	nheA	non-hemolytic enterotoxin NHE subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	388	386	100.00	97.42	388	AAS40892.1	non-hemolytic enterotoxin NHE subunit A	NA	NA	CP076219.1	1757089	1758255
GCA_022221305.1	GCA_022221305.1_01936	nheB	non-hemolytic enterotoxin NHE subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	402	402	100.00	98.51	402	AAS40893.1	non-hemolytic enterotoxin NHE subunit B	NA	NA	CP076219.1	1758287	1759495
GCA_022221305.1	GCA_022221305.1_01998	entFM	enterotoxin EntFM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	420	421	100.00	98.57	421	AFH83235.1	enterotoxin EntFM	NF040678.1	enterotoxin EntFM	CP076219.1	1824487	1825749
GCA_022221305.1	GCA_022221305.1_02084	fosB	FosBx1 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	138	100.00	89.13	138	WP_000943772.1	FosBx1 family fosfomycin resistance bacillithiol transferase	NF041541.1	FosBx1 family fosfomycin resistance bacillithiol transferase	CP076219.1	1902848	1903264
GCA_022221305.1	GCA_022221305.1_02440	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	219	98.63	57.87	216	WP_087344902.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP076219.1	2233128	2233778
GCA_022221305.1	GCA_022221305.1_02531	bla	class A beta-lactamase Bla1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	306	309	99.03	99.67	306	WP_011053164.1	class A beta-lactamase Bla1	NF033096.1	class A beta-lactamase Bla1	CP076219.1	2314196	2315116
GCA_022221305.1	GCA_022221305.1_02556	hlyII	hemolysin II HlyII	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	240	412	58.25	96.25	240	AAP10457.1	hemolysin II HlyII	NA	NA	CP076219.1	2338700	2339422
GCA_022221305.1	GCA_022221305.1_02557	hlyIIR	hemolysin II regulator HlyIIR	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	201	201	100.00	99.50	201	AAO74585.1	hemolysin II regulator HlyIIR	NA	NA	CP076219.1	2339953	2340558
GCA_022221305.1	GCA_022221305.1_02558	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	82.52	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP076219.1	2340700	2342178
GCA_022221305.1	GCA_022221305.1_02660	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	210	210	98.10	66.67	207	WP_071218948.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP076219.1	2432854	2433486
GCA_022221305.1	GCA_022221305.1_03194	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	184	184	100.00	100.00	184	WP_000054744.1	streptothricin N-acetyltransferase SatA	NA	NA	CP076219.1	2917548	2918102
GCA_022221305.1	GCA_022221305.1_03346	alo	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	512	512	100.00	100.00	512	AAP27127.1	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	NA	NA	CP076219.1	3070513	3072051
GCA_022221305.1	GCA_022221305.1_03490	bla2	BcII family subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	EXACTP	256	256	100.00	100.00	256	WP_000799223.1	BcII family subclass B1 metallo-beta-lactamase	NF033095.1	BcII family subclass B1 metallo-beta-lactamase	CP076219.1	3201021	3201791
GCA_022221305.1	GCA_022221305.1_03861	plcA	phosphatidylinositol diacylglycerol-lyase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	329	329	100.00	100.00	329	AAP27624.1	phosphatidylinositol diacylglycerol-lyase	NA	NA	CP076219.1	3539454	3540443
GCA_022221305.1	GCA_022221305.1_04082	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	121	139	84.17	99.15	117	WP_000938987.1	fosfomycin resistance bacillithiol transferase FosB2	NA	NA	CP076219.1	3760096	3760461
GCA_022221305.1	GCA_022221305.1_05550	plcR	transcriptional regulator PlcR	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	213	285	74.74	98.12	213	AAT61178.1	transcriptional regulator PlcR	NA	NA	CP076219.1	5063256	5063897
GCA_022221305.1	GCA_022221305.1_05804	hasA	hyaluronan synthase HasA	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	366	427	85.71	100.00	366	KHA45933.1	hyaluronan synthase HasA	NA	NA	CP076220.1	111767	112867
GCA_022221305.1	GCA_022221305.1_05816	cya	anthrax toxin edema factor	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	800	800	100.00	99.62	800	AJG68144.1	anthrax toxin edema factor	NA	NA	CP076220.1	122880	125282
GCA_022221305.1	GCA_022221305.1_05821	atxA	anthrax toxin expression trans-acting transcriptional regulator AtxA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	475	475	100.00	100.00	475	AAD32423.1	anthrax toxin expression trans-acting transcriptional regulator AtxA	NA	NA	CP076220.1	128037	129464
GCA_022221305.1	GCA_022221305.1_05832	pagA	anthrax toxin protective antigen	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	764	764	100.00	100.00	764	AAD32414.1	anthrax toxin protective antigen	NA	NA	CP076220.1	144015	146309
GCA_022221305.1	GCA_022221305.1_05837	lef	anthrax toxin lethal factor	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	809	809	100.00	99.75	809	AAM26117.1	anthrax toxin lethal factor	NA	NA	CP076220.1	149593	152022
GCA_022221305.1	GCA_022221305.1_05959	capB	capsule biosynthesis protein CapB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	464	464	100.00	100.00	464	AAF13663.1	capsule biosynthesis protein CapB	NA	NA	CP076221.1	71379	72773
GCA_022221305.1	GCA_022221305.1_05960	capC	capsular polyglutamate amide ligase/translocase CapC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	149	149	100.00	100.00	149	AAM26221.1	capsular polyglutamate amide ligase/translocase CapC	NA	NA	CP076221.1	72788	73237
GCA_022221305.1	GCA_022221305.1_05961	capA	capsular polyglutamate synthetase CapA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	411	411	100.00	99.76	411	AAM26220.1	capsular polyglutamate synthetase CapA	NA	NA	CP076221.1	73249	74484
GCA_022221305.1	GCA_022221305.1_05962	capD	capsule biosynthesis gamma-glutamyltransferase CapD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	528	528	100.00	100.00	528	AAM26219.1	capsule biosynthesis gamma-glutamyltransferase CapD	NA	NA	CP076221.1	74481	76067
GCA_022221305.1	GCA_022221305.1_05963	capE	capsule biosynthesis protein CapE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	47	47	100.00	100.00	47	AAF13659.1	capsule biosynthesis protein CapE	NA	NA	CP076221.1	76082	76225
GCA_938041125.1	GCA_938041125.1_02557	nimIJ	NimIJ family 5-nitroimidazole reductase	core	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	HMM	171	172	95.93	79.39	165	WP_021588763.1	NimIJ family 5-nitroimidazole reductase	NF000262.1	NimIJ family 5-nitroimidazole reductase	CALHZC010000089.1	18440	18955
GCA_001457655.1	GCA_001457655.1_01668	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LN831035.1	1648597	1649991
GCA_030229665.1	GCA_030229665.1_00197	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPHY010000016.1	788	1639
GCA_030229665.1	GCA_030229665.1_00206	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPHY010000016.1	9521	10375
GCA_030229665.1	GCA_030229665.1_00209	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPHY010000018.1	269	1444
GCA_014962425.1	GCA_014962425.1_00024	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP063143.1	27348	28421
GCA_014962425.1	GCA_014962425.1_00157	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP063143.1	171007	172299
GCA_014962425.1	GCA_014962425.1_00305	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP063143.1	319371	320216
GCA_014962425.1	GCA_014962425.1_00306	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP063143.1	320323	322080
GCA_014962425.1	GCA_014962425.1_00307	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP063143.1	322070	322450
GCA_014962425.1	GCA_014962425.1_01335	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP063143.1	1334209	1334589
GCA_014962425.1	GCA_014962425.1_01336	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP063143.1	1334579	1336336
GCA_014962425.1	GCA_014962425.1_01337	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP063143.1	1336443	1337288
GCA_014962425.1	GCA_014962425.1_02046	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP063143.1	2067081	2067500
GCA_003985305.1	GCA_003985305.1_00895	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RYER01000019.1	110632	111573
GCA_030232205.1	GCA_030232205.1_01238	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JASPJE010000025.1	10100	11641
GCA_030232205.1	GCA_030232205.1_01239	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJE010000025.1	11904	12758
GCA_030232205.1	GCA_030232205.1_01241	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JASPJE010000025.1	13558	14004
GCA_030232205.1	GCA_030232205.1_01279	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASPJE010000028.1	2395	4176
GCA_030232205.1	GCA_030232205.1_01631	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASPJE010000039.1	901	2820
GCA_030232205.1	GCA_030232205.1_01811	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPJE010000043.1	278	1453
GCA_030232205.1	GCA_030232205.1_01813	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JASPJE010000043.1	1657	2493
GCA_030232205.1	GCA_030232205.1_01814	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JASPJE010000043.1	2493	2912
GCA_030232205.1	GCA_030232205.1_02013	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JASPJE010000058.1	88	903
GCA_002871735.1	GCA_002871735.1_01329	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	98.83	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	PNHI01000029.1	8962	10503
GCA_002871735.1	GCA_002871735.1_01330	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	PNHI01000029.1	10708	11562
GCA_002871735.1	GCA_002871735.1_01528	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PNHI01000003.1	200420	201844
GCA_002871735.1	GCA_002871735.1_01615	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	PNHI01000035.1	852	1271
GCA_002871735.1	GCA_002871735.1_01616	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	PNHI01000035.1	1271	2107
GCA_002871735.1	GCA_002871735.1_01618	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	PNHI01000035.1	2311	3486
GCA_002871735.1	GCA_002871735.1_01846	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	PNHI01000045.1	174	989
GCA_002871735.1	GCA_002871735.1_02611	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	PNHI01000009.1	110694	111548
GCA_009912075.1	GCA_009912075.1_00019	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	257	257	100.00	98.05	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP047805.1	19177	19950
GCA_009912075.1	GCA_009912075.1_00023	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP047805.1	21659	22150
GCA_009912075.1	GCA_009912075.1_00028	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP047805.1	24365	24715
GCA_009912075.1	GCA_009912075.1_00184	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.65	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP047805.1	150894	151613
GCA_009912075.1	GCA_009912075.1_00185	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP047805.1	151648	152376
GCA_009912075.1	GCA_009912075.1_00186	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP047805.1	152530	153315
GCA_009912075.1	GCA_009912075.1_00187	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP047805.1	153354	154109
GCA_009912075.1	GCA_009912075.1_00199	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.06	238	ABD30999.1	serine protease SplE	NA	NA	CP047805.1	163091	163807
GCA_009912075.1	GCA_009912075.1_00244	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP047805.1	202673	203965
GCA_009912075.1	GCA_009912075.1_00269	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP047805.1	235793	236638
GCA_009912075.1	GCA_009912075.1_00270	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP047805.1	236745	238502
GCA_009912075.1	GCA_009912075.1_00271	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP047805.1	238492	238872
GCA_009912075.1	GCA_009912075.1_01386	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	CP047805.1	1381735	1383168
GCA_009912075.1	GCA_009912075.1_01409	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP047805.1	1401989	1402384
GCA_009912075.1	GCA_009912075.1_01410	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP047805.1	1402402	1403691
GCA_009912075.1	GCA_009912075.1_01411	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP047805.1	1403691	1404005
GCA_009912075.1	GCA_009912075.1_01784	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP047805.1	1769127	1770482
GCA_009912075.1	GCA_009912075.1_01976	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP047805.1	1992825	1994183
GCA_009912075.1	GCA_009912075.1_02087	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.97	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP047805.1	2116359	2119910
GCA_009912075.1	GCA_009912075.1_02110	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP047805.1	2141209	2142261
GCA_009912075.1	GCA_009912075.1_02145	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP047805.1	2183369	2184898
GCA_009912075.1	GCA_009912075.1_02357	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP047805.1	2409971	2410948
GCA_009912075.1	GCA_009912075.1_02358	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP047805.1	2410950	2411897
GCA_009912075.1	GCA_009912075.1_02359	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP047805.1	2412447	2413412
GCA_009912075.1	GCA_009912075.1_02454	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP047805.1	2507659	2508078
GCA_009912075.1	GCA_009912075.1_02781	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP047805.1	2812279	2812413
GCA_009912075.1	GCA_009912075.1_02806	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	98.72	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	CP047805.1	2830135	2830839
GCA_009730635.1	GCA_009730635.1_00280	inlG	class 1 internalin InlG	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	490	490	100.00	99.80	490	AEO05269.1	class 1 internalin InlG	NA	NA	CP046362.1	283097	284569
GCA_009730635.1	GCA_009730635.1_00281	inlC	class 1 internalin InlC2	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	548	548	100.00	99.82	548	AAB67969.1	class 1 internalin InlC2	NA	NA	CP046362.1	284707	286353
GCA_009730635.1	GCA_009730635.1_00282	inlD	class 1 internalin InlD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	567	567	100.00	99.82	567	AAB67970.1	class 1 internalin InlD	NA	NA	CP046362.1	286561	288264
GCA_009730635.1	GCA_009730635.1_00283	inlE	class 1 internalin InlE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	499	499	100.00	99.60	499	CAA07458.1	class 1 internalin InlE	NA	NA	CP046362.1	288473	289972
GCA_009730635.1	GCA_009730635.1_00375	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1781	1778	100.00	99.05	1781	AEO24631.1	class 1 internalin InlI	NA	NA	CP046362.1	385801	391146
GCA_009730635.1	GCA_009730635.1_00453	inlF	class 1 internalin InlF	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	821	821	100.00	100.00	821	AEO24707.1	class 1 internalin InlF	NA	NA	CP046362.1	454485	456950
GCA_009730635.1	GCA_009730635.1_00477	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	36.90	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA	CP046362.1	479390	481792
GCA_009730635.1	GCA_009730635.1_00478	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	99.52	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA	CP046362.1	481877	483769
GCA_009730635.1	GCA_009730635.1_00481	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	91.71	205	AEO24735.1	nuclear targeted protein LntA	NA	NA	CP046362.1	485439	486056
GCA_009730635.1	GCA_009730635.1_00549	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	611	605	100.00	98.85	611	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA	CP046362.1	549943	551778
GCA_009730635.1	GCA_009730635.1_00660	inl-lmo0610	lmo0610 family class 1 internalin Inl-lmo0610	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	589	589	100.00	99.66	589	AEO24908.1	lmo0610 family class 1 internalin Inl-lmo0610	NA	NA	CP046362.1	660831	662600
GCA_009730635.1	GCA_009730635.1_00984	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	98.09	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP046362.1	967537	969108
GCA_009730635.1	GCA_009730635.1_01145	aut	peptidoglycan hydrolase Auto	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	572	572	100.00	100.00	572	ADB67911.1	peptidoglycan hydrolase Auto	NA	NA	CP046362.1	1117545	1119263
GCA_009730635.1	GCA_009730635.1_01369	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	598	598	100.00	99.16	598	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK	CP046362.1	1315758	1317554
GCA_009730635.1	GCA_009730635.1_01826	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	133	133	100.00	94.74	133	WP_010989789.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP046362.1	1761672	1762073
GCA_009730635.1	GCA_009730635.1_01914	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	100.00	296	AHJ03495.1	class 3 internalin InlC	NA	NA	CP046362.1	1854430	1855323
GCA_009730635.1	GCA_009730635.1_02167	inlL	class 1 internalin InlL	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	626	626	100.00	97.92	626	CDG45949.1	class 1 internalin InlL	NA	NA	CP046362.1	2100144	2102024
GCA_009730635.1	GCA_009730635.1_02578	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	383	388	98.71	99.48	383	AEO26812.1	class 3 internalin InlP	NA	NA	CP046362.1	2496538	2497689
GCA_009730635.1	GCA_009730635.1_02667	ami	autolysin Ami	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	917	917	100.00	99.78	917	ASH48222.1	autolysin Ami	NA	NA	CP046362.1	2587424	2590177
GCA_025905525.1	GCA_025905525.1_00274	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP109619.1	320768	322687
GCA_003425955.1	GCA_003425955.1_01691	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	98.28	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031683.1	1652119	1653513
GCA_003855615.1	GCA_003855615.1_01247	catA	type A-4 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	217	217	99.08	91.63	215	WP_063843208.1	type A-4 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP034091.1	1347149	1347802
GCA_003855615.1	GCA_003855615.1_03024	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	92.19	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP034091.1	3189402	3189980
GCA_003855615.1	GCA_003855615.1_03028	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	194	194	100.00	99.48	194	AAD47284.1	tellurium resistance-associated protein TerZ	NA	NA	CP034091.1	3192737	3193321
GCA_003855615.1	GCA_003855615.1_03039	tet(J)	tetracycline efflux MFS transporter Tet(J)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	398	398	99.75	99.24	397	WP_004245621.1	tetracycline efflux MFS transporter Tet(J)	NF012194.0	tetracycline efflux MFS transporter Tet(J)	CP034091.1	3202567	3203763
GCA_003855615.1	GCA_003855615.1_03092	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206356.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP034091.1	3258487	3259266
GCA_003855615.1	GCA_003855615.1_03093	ere(A)	EreA family erythromycin esterase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EXACTP	406	406	100.00	100.00	406	WP_032084014.1	EreA family erythromycin esterase	NF000208.1	EreA family erythromycin esterase	CP034091.1	3259363	3260583
GCA_003855615.1	GCA_003855615.1_03094	dfrA32	trimethoprim-resistant dihydrofolate reductase DfrA32	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	233	157	100.00	99.36	157	WP_032084013.1	trimethoprim-resistant dihydrofolate reductase DfrA32	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	CP034091.1	3260776	3261477
GCA_003855615.1	GCA_003855615.1_03099	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	PARTIALP	105	134	78.36	99.05	105	WP_001242578.1	bleomycin binding protein	NA	NA	CP034091.1	3265744	3266061
GCA_003855615.1	GCA_003855615.1_03102	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	279	279	100.00	99.64	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP034091.1	3267839	3268678
GCA_003855615.1	GCA_003855615.1_03103	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP034091.1	3268672	3269019
GCA_003855615.1	GCA_003855615.1_03104	arr-3	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	EXACTP	150	150	100.00	100.00	150	WP_001749986.1	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP034091.1	3269242	3269694
GCA_003855615.1	GCA_003855615.1_03105	catB3	type B-3 chloramphenicol O-acetyltransferase CatB3	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	210	210	100.00	100.00	210	WP_000186237.1	type B-3 chloramphenicol O-acetyltransferase CatB3	NF000490.1	type B chloramphenicol O-acetyltransferase	CP034091.1	3269779	3270411
GCA_003855615.1	GCA_003855615.1_03106	blaOXA-1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	276	276	100.00	100.00	276	WP_001334766.1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NF000388.2	OXA-1 family class D beta-lactamase	CP034091.1	3270549	3271379
GCA_003855615.1	GCA_003855615.1_03107	aac(6)-Ib-cr	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr	core	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	BLASTP	199	184	100.00	100.00	184	WP_063840321.1	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr5	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP034091.1	3271510	3272109
GCA_003855615.1	GCA_003855615.1_03109	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP034091.1	3273042	3273857
GCA_003855615.1	GCA_003855615.1_03112	tet(C)	tetracycline efflux MFS transporter Tet(C)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	396	396	100.00	99.75	396	WP_000841446.1	tetracycline efflux MFS transporter Tet(C)	NF012191.0	tetracycline efflux MFS transporter Tet(C)	CP034091.1	3276336	3277526
GCA_003855615.1	GCA_003855615.1_03154	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP034091.1	3329826	3330629
GCA_003855615.1	GCA_003855615.1_03155	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP034091.1	3330629	3331465
GCA_003855615.1	GCA_003855615.1_03158	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	404	404	100.00	97.28	404	WP_000214119.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP034091.1	3332421	3333635
GCA_003855615.1	GCA_003855615.1_03749	aac(3)-IVa	aminoglycoside N-acetyltransferase AAC(3)-IVa	core	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	EXACTP	258	258	100.00	100.00	258	WP_001199192.1	aminoglycoside N-acetyltransferase AAC(3)-IVa	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	CP034091.1	4007956	4008732
GCA_003855615.1	GCA_003855615.1_03751	aph(4)-Ia	aminoglycoside O-phosphotransferase APH(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	HYGROMYCIN	EXACTP	341	341	100.00	100.00	341	WP_000742814.1	aminoglycoside O-phosphotransferase APH(4)-Ia	NF000107.2	aminoglycoside O-phosphotransferase APH(4)-Ia	CP034091.1	4008961	4009986
GCA_003855615.1	GCA_003855615.1_03758	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	282	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP034091.1	4014800	4015648
GCA_003855615.1	GCA_003855615.1_03762	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	404	404	100.00	99.50	404	WP_000214119.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP034091.1	4018151	4019365
GCA_003855615.1	GCA_003855615.1_03772	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_071593219.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP034091.1	4027970	4028749
GCA_003855615.1	GCA_003855615.1_03773	lnu(F)	lincosamide nucleotidyltransferase Lnu(F)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	273	273	100.00	100.00	273	WP_000939727.1	lincosamide nucleotidyltransferase Lnu(F)	NF000119.1	lincosamide nucleotidyltransferase Lnu(F)	CP034091.1	4028881	4029702
GCA_003855615.1	GCA_003855615.1_03774	qacE	quaternary ammonium compound efflux SMR transporter QacE	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	115	115	100.00	99.13	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP034091.1	4029850	4030197
GCA_003855615.1	GCA_003855615.1_03775	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	279	279	100.00	99.64	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP034091.1	4030191	4031030
GCA_003855615.1	GCA_003855615.1_03786	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206356.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP034091.1	4040788	4041567
GCA_003855615.1	GCA_003855615.1_03787	dfrA12	trimethoprim-resistant dihydrofolate reductase DfrA12	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_001083725.1	trimethoprim-resistant dihydrofolate reductase DfrA12	NF000053.2	trimethoprim-resistant dihydrofolate reductase DfrA12	CP034091.1	4041987	4042484
GCA_962724685.1	GCA_962724685.1_00235	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIYN010000001.1	250293	251819
GCA_962724685.1	GCA_962724685.1_00397	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIYN010000002.1	35769	36674
GCA_962724685.1	GCA_962724685.1_00633	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	251	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIYN010000003.1	85802	86557
GCA_962724685.1	GCA_962724685.1_00634	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIYN010000003.1	86674	87912
GCA_962724685.1	GCA_962724685.1_00939	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIYN010000005.1	75580	76959
GCA_017167155.1	GCA_017167155.1_01467	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAFDQG010000002.1	169814	170215
GCA_017167155.1	GCA_017167155.1_01468	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFDQG010000002.1	170233	171522
GCA_017167155.1	GCA_017167155.1_01548	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAFDQG010000002.1	264925	265998
GCA_017167155.1	GCA_017167155.1_02178	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFDQG010000003.1	60414	61703
GCA_000373785.1	GCA_000373785.1_00874	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	651	651	100.00	90.94	651	WP_063856412.1	tetracycline resistance ribosomal protection protein Tet(T)	NF012153.1	tetracycline resistance ribosomal protection protein	KB892378.1	150801	152756
GCA_026057715.1	GCA_026057715.1_00435	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	97	91	97.80	65.22	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP110416.1	444729	445022
GCA_026057715.1	GCA_026057715.1_00614	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	97.68	50.17	303	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP110416.1	614285	615184
GCA_026057715.1	GCA_026057715.1_02717	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	309	147	93.88	43.48	138	ABG05788.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP110416.1	2831592	2832521
GCA_026057715.1	GCA_026057715.1_03805	aac(3)-I	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	158	156	91.03	66.90	142	WP_034006142.1	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP110416.1	3977412	3977888
GCA_003490485.1	GCA_003490485.1_00490	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQHG01000002.1	111915	113309
GCA_003490485.1	GCA_003490485.1_01813	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	QQHG01000008.1	48444	49304
GCA_003943905.1	GCA_003943905.1_00142	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RJNS01000001.1	135328	136065
GCA_003943905.1	GCA_003943905.1_00153	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RJNS01000001.1	145983	147902
GCA_947254495.1	GCA_947254495.1_01924	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.85	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAMYEN010000116.1	2097	2507
GCA_000176955.1	GCA_000176955.1_00388	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	ADDO01000061.1	61139	63058
GCA_000176955.1	GCA_000176955.1_00687	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	ADDO01000055.1	64130	64861
GCA_018408075.1	GCA_018408075.1_02210	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	105	104	100.00	98.08	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAGSWU010000037.1	5032	5349
GCA_018408075.1	GCA_018408075.1_02211	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGSWU010000037.1	5346	6635
GCA_018408075.1	GCA_018408075.1_02212	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAGSWU010000037.1	6653	7048
GCA_024793125.1	GCA_024793125.1_02468	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JANUOJ010000003.1	2226725	2227930
GCA_024793125.1	GCA_024793125.1_02469	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JANUOJ010000003.1	2227955	2228467
GCA_024793125.1	GCA_024793125.1_02688	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	307	300	99.33	39.40	302	WP_032579291.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JANUOJ010000003.1	2400928	2401851
GCA_024793125.1	GCA_024793125.1_03192	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	300	296	100.00	63.85	296	WP_005827792.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JANUOJ010000003.1	2792169	2793071
GCA_024793125.1	GCA_024793125.1_03809	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	321	321	99.07	83.65	318	WP_004348227.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANUOJ010000003.1	3359283	3360248
GCA_020735385.1	GCA_020735385.1_00278	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP085953.1	257035	258675
GCA_020735385.1	GCA_020735385.1_00774	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP085953.1	751805	753724
GCA_902460345.1	GCA_902460345.1_00863	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	LR699783.1	628521	629258
GCA_902460345.1	GCA_902460345.1_00874	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LR699783.1	639173	641092
GCA_000759165.1	GCA_000759165.1_01138	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JRNM01000032.1	42336	43301
GCA_000759165.1	GCA_000759165.1_01502	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JRNM01000052.1	26622	28547
GCA_000759165.1	GCA_000759165.1_01875	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JRNM01000093.1	10185	10985
GCA_015560925.1	GCA_015560925.1_01247	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JADMST010000001.1	314763	315722
GCA_015560925.1	GCA_015560925.1_02553	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	PARTIALP	202	244	81.56	98.99	199	WP_014387027.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JADMST010000003.1	321872	322480
GCA_015560925.1	GCA_015560925.1_02781	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JADMST010000055.1	275	2200
GCA_022690545.1	GCA_022690545.1_01316	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVF010000026.1	4950	5297
GCA_022690545.1	GCA_022690545.1_01556	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.17	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVF010000002.1	177597	178889
GCA_022690545.1	GCA_022690545.1_01557	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALCVF010000002.1	178907	179299
GCA_022690545.1	GCA_022690545.1_01559	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.59	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCVF010000030.1	522	1988
GCA_022690545.1	GCA_022690545.1_01560	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JALCVF010000030.1	2087	2986
GCA_022690545.1	GCA_022690545.1_01562	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCVF010000030.1	4285	4845
GCA_022690545.1	GCA_022690545.1_01563	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCVF010000030.1	5029	6573
GCA_022690545.1	GCA_022690545.1_01592	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	JALCVF010000034.1	3217	4785
GCA_029967835.1	GCA_029967835.1_00077	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	94.07	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	JASCAM010000029.1	78807	80981
GCA_029967835.1	GCA_029967835.1_00080	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	91.04	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	JASCAM010000029.1	83397	87056
GCA_029967835.1	GCA_029967835.1_00081	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.45	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	JASCAM010000029.1	87198	88313
GCA_029967835.1	GCA_029967835.1_00117	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	100.00	78.01	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	JASCAM010000029.1	132056	132487
GCA_029967835.1	GCA_029967835.1_01375	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	88.81	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	JASCAM010000035.1	76865	77758
GCA_029967835.1	GCA_029967835.1_02386	ampC-Ecan	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	381	381	100.00	99.21	381	WP_006178946.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	NF041666.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	JASCAM010000001.1	14840	15985
GCA_029967835.1	GCA_029967835.1_02683	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	122	102	100.00	67.74	124	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	JASCAM010000022.1	193016	193384
GCA_029967835.1	GCA_029967835.1_02875	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	96.88	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	JASCAM010000023.1	31093	31671
GCA_029967835.1	GCA_029967835.1_04127	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	93.62	141	WP_025205684.1	fosfomycin resistance glutathione transferase FosA2	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	JASCAM010000014.1	153876	154301
GCA_000233305.2	GCA_000233305.2_00955	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	371	371	100.00	100.00	371	EHE72460.1	multidrug efflux MFS transporter PmrA	NA	NA	AGQK01000002.1	304382	305497
GCA_001653495.1	GCA_001653495.1_02300	aac(2)-Ie	aminoglycoside N-acetyltransferase AAC(2)-Ie	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	182	182	100.00	100.00	182	WP_010908954.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	NF000054.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	LYPH01000044.1	3748	4296
GCA_001008215.1	GCA_001008215.1_00391	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LCTI01000015.1	48346	49740
GCA_030229485.1	GCA_030229485.1_00090	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPHP010000014.1	1412	2266
GCA_001457475.1	GCA_001457475.1_01088	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	LN831029.1	1159358	1159645
GCA_001457475.1	GCA_001457475.1_01089	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LN831029.1	1159656	1161344
GCA_001457475.1	GCA_001457475.1_02298	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	398	399	96.49	61.04	385	WP_000804064.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	LN831029.1	2508393	2509589
GCA_001457475.1	GCA_001457475.1_02589	catB	type B chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	210	98.10	81.55	206	WP_063843223.1	type B chloramphenicol O-acetyltransferase	NF000490.1	type B chloramphenicol O-acetyltransferase	LN831029.1	2821723	2822373
GCA_001457475.1	GCA_001457475.1_03452	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	LN831029.1	3794438	3795253
GCA_001457475.1	GCA_001457475.1_03600	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	261	266	97.74	42.15	261	WP_004861468.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	LN831029.1	3937566	3938351
GCA_001457475.1	GCA_001457475.1_04080	blaELC	ELC family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	HMM	430	450	100.00	87.78	450	WP_232734851.1	ELC family class C beta-lactamase	NF050047.1	ELC family class C beta-lactamase	LN831029.1	4452339	4453631
GCA_001457475.1	GCA_001457475.1_04182	blaOXA-114f	class D beta-lactamase OXA-114f	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	275	275	100.00	100.00	275	WP_024069684.1	class D beta-lactamase OXA-114f	NF033818.0	OXA-114 family class D beta-lactamase	LN831029.1	4583884	4584711
GCA_001457475.1	GCA_001457475.1_05776	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	120	99.17	59.66	119	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LN831029.1	6311815	6312174
GCA_001457475.1	GCA_001457475.1_05798	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	LN831029.1	6335166	6335600
GCA_001457475.1	GCA_001457475.1_05799	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	LN831029.1	6335672	6336022
GCA_001457475.1	GCA_001457475.1_05800	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	LN831029.1	6336035	6336310
GCA_001457475.1	GCA_001457475.1_05801	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LN831029.1	6336382	6338067
GCA_001457475.1	GCA_001457475.1_05802	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	LN831029.1	6338085	6338450
GCA_001457475.1	GCA_001457475.1_05803	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	LN831029.1	6338447	6338683
GCA_015558405.1	GCA_015558405.1_01147	blaMUN	MUN family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	291	302	96.36	100.00	291	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	JADMNV010000001.1	519894	520769
GCA_015558405.1	GCA_015558405.1_01685	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JADMNV010000002.1	292393	294318
GCA_029226345.1	GCA_029226345.1_00474	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	250	405	60.00	100.00	243	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NA	NA	JAKNCU010000001.1	609272	610024
GCA_029226345.1	GCA_029226345.1_00476	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAKNCU010000001.1	610610	612073
GCA_029226345.1	GCA_029226345.1_00682	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.43	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAKNCU010000001.1	853617	855095
GCA_003426585.1	GCA_003426585.1_01990	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NOWI01000007.1	10780	11190
GCA_902477965.1	GCA_902477965.1_01055	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CABSJF010000028.1	6968	8362
GCA_013276815.1	GCA_013276815.1_01436	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	100.00	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMLT01000046.1	17762	18895
GCA_003860565.1	GCA_003860565.1_00660	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	CP034157.1	677026	677889
GCA_003860565.1	GCA_003860565.1_00747	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	292	100.00	64.51	293	WP_002977989.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP034157.1	775599	776480
GCA_003860565.1	GCA_003860565.1_01439	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	68.42	266	WP_006745469.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP034157.1	1524131	1524931
GCA_003860565.1	GCA_003860565.1_01448	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	295	99.32	84.01	294	WP_064964747.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP034157.1	1531267	1532151
GCA_001814685.1	GCA_001814685.1_01087	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	KV817539.1	47376	49301
GCA_030230405.1	GCA_030230405.1_00080	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JASPCX010000006.1	64146	64565
GCA_030230405.1	GCA_030230405.1_00149	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JASPCX010000007.1	14510	15583
GCA_030230405.1	GCA_030230405.1_02156	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASPCX010000004.1	104812	106104
GCA_030230405.1	GCA_030230405.1_02293	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASPCX010000028.1	2505	3350
GCA_030230405.1	GCA_030230405.1_02294	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASPCX010000028.1	3457	5214
GCA_030230405.1	GCA_030230405.1_02295	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASPCX010000028.1	5204	5584
GCA_030230405.1	GCA_030230405.1_02296	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JASPCX010000029.1	792	1334
GCA_030230405.1	GCA_030230405.1_02297	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JASPCX010000029.1	1427	2221
GCA_015559215.1	GCA_015559215.1_00713	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.99	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JADMPM010000022.1	24480	26204
GCA_015559215.1	GCA_015559215.1_00714	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.97	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JADMPM010000022.1	26206	27942
GCA_005890245.1	GCA_005890245.1_00463	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	100.00	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQF01000117.1	570	1703
GCA_003942375.1	GCA_003942375.1_02091	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJMS01000018.1	53	1516
GCA_003942375.1	GCA_003942375.1_02092	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJMS01000018.1	1636	2853
GCA_000738195.1	GCA_000738195.1_00275	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.18	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCG01000013.1	34475	35329
GCA_000738195.1	GCA_000738195.1_01795	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JFCG01000044.1	2572	4353
GCA_000027305.1	GCA_000027305.1_01715	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	464	464	100.00	100.00	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	L42023.1	1678071	1679465
GCA_003492465.1	GCA_003492465.1_01374	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQMF01000003.1	139266	140171
GCA_003492465.1	GCA_003492465.1_01950	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQMF01000010.1	44600	46126
GCA_003492465.1	GCA_003492465.1_02030	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQMF01000012.1	19335	20903
GCA_003492465.1	GCA_003492465.1_02032	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQMF01000012.1	21695	22558
GCA_003492465.1	GCA_003492465.1_02033	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQMF01000012.1	22575	23813
GCA_013277265.1	GCA_013277265.1_01871	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	99.73	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMMP01000074.1	342	1475
GCA_015476235.1	GCA_015476235.1_00518	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	97.68	50.17	303	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP064338.1	520402	521301
GCA_015476235.1	GCA_015476235.1_02512	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	309	147	93.88	44.20	138	ABG05788.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP064338.1	2648521	2649450
GCA_015476235.1	GCA_015476235.1_03610	aadA6	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA6	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	281	281	100.00	100.00	281	WP_022675713.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA6	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP064338.1	3800402	3801247
GCA_015476235.1	GCA_015476235.1_03614	aac(3)-I	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	158	156	91.03	66.90	142	WP_034006142.1	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP064338.1	3804571	3805047
GCA_026427435.1	GCA_026427435.1_00333	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP084480.1	335206	335625
GCA_026427435.1	GCA_026427435.1_00848	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP084480.1	863438	864511
GCA_026427435.1	GCA_026427435.1_00860	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP084480.1	875553	877559
GCA_026427435.1	GCA_026427435.1_01004	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084480.1	1030852	1032144
GCA_026427435.1	GCA_026427435.1_01151	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP084480.1	1178861	1179706
GCA_026427435.1	GCA_026427435.1_01152	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP084480.1	1179813	1181570
GCA_026427435.1	GCA_026427435.1_01153	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP084480.1	1181560	1181940
GCA_026427435.1	GCA_026427435.1_02603	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP084481.1	18716	19276
GCA_026427435.1	GCA_026427435.1_02604	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.22	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP084481.1	19460	21004
GCA_026427435.1	GCA_026427435.1_02627	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP084481.1	39665	40408
GCA_026427435.1	GCA_026427435.1_02628	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP084481.1	40625	41029
GCA_026427435.1	GCA_026427435.1_02640	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP084483.1	36	770
GCA_001262015.1	GCA_001262015.1_01281	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP012074.1	1450867	1452057
GCA_000296385.1	GCA_000296385.1_00264	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.09	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JH815185.1	285120	286598
GCA_000296385.1	GCA_000296385.1_01456	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_003505402.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JH815185.1	1507338	1509257
GCA_000296385.1	GCA_000296385.1_02724	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.18	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JH815186.1	4222	4959
GCA_024294705.1	GCA_024294705.1_00469	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOE010000001.1	478482	479945
GCA_024294705.1	GCA_024294705.1_00470	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOE010000001.1	480065	481282
GCA_024294705.1	GCA_024294705.1_00536	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOE010000001.1	539649	540077
GCA_016127655.1	GCA_016127655.1_01990	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	146	144	88.89	48.84	129	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP066026.1	1990258	1990698
GCA_016127655.1	GCA_016127655.1_01999	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	476	561	82.17	46.57	466	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP066026.1	1999471	2000901
GCA_016127655.1	GCA_016127655.1_02884	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	302	98.68	43.14	306	WP_105777201.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP066026.1	2929911	2930795
GCA_000800315.1	GCA_000800315.1_00830	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP009420.1	855732	857111
GCA_000800315.1	GCA_000800315.1_01576	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP009420.1	1621638	1622543
GCA_000800315.1	GCA_000800315.1_01706	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP009420.1	1757923	1759161
GCA_000800315.1	GCA_000800315.1_01707	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP009420.1	1759569	1760201
GCA_000800315.1	GCA_000800315.1_01709	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP009420.1	1761026	1762594
GCA_000800315.1	GCA_000800315.1_01990	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP009420.1	2038294	2039820
GCA_000242315.1	GCA_000242315.1_01784	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.50	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JH591152.1	24804	26282
GCA_000242315.1	GCA_000242315.1_01976	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JH591157.1	64404	66323
GCA_008726415.1	GCA_008726415.1_00843	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VYVP01000024.1	3882	5522
GCA_008726415.1	GCA_008726415.1_00877	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_014636291.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	VYVP01000025.1	5117	7036
GCA_008726415.1	GCA_008726415.1_01571	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	VYVP01000043.1	13521	14252
GCA_003496425.1	GCA_003496425.1_01562	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQCQ01000005.1	178919	180487
GCA_003496425.1	GCA_003496425.1_01564	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQCQ01000005.1	181279	181911
GCA_003496425.1	GCA_003496425.1_01565	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.09	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQCQ01000005.1	182159	183397
GCA_003496425.1	GCA_003496425.1_01703	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQCQ01000006.1	126920	127825
GCA_003496425.1	GCA_003496425.1_01908	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQCQ01000008.1	14758	16284
GCA_009717045.1	GCA_009717045.1_01180	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMXV01000002.1	232203	232631
GCA_009717045.1	GCA_009717045.1_01185	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMXV01000002.1	234498	235961
GCA_009717045.1	GCA_009717045.1_01186	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMXV01000002.1	236081	237298
GCA_022068285.1	GCA_022068285.1_00932	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035258.1	891251	892450
GCA_000477735.1	GCA_000477735.1_00768	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KI518467.1	824123	824533
GCA_014890515.1	GCA_014890515.1_00011	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	336	263	100.00	100.00	263	WP_001206316.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	JABJUS010000106.1	262	1272
GCA_018128265.1	GCA_018128265.1_00128	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	136	150	84.00	51.16	129	WP_063857695.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP072387.1	140789	141199
GCA_018128265.1	GCA_018128265.1_00564	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	394	391	99.74	63.78	392	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	CP072387.1	671001	672185
GCA_018128265.1	GCA_018128265.1_00938	helR	RNA polymerase recycling motor ATPase HelR	plus	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	780	722	97.51	64.48	746	CCA59315.1	RNA polymerase recycling motor ATPase HelR	NF041254.1	RNA polymerase recycling motor ATPase HelR	CP072387.1	1078249	1080591
GCA_018128265.1	GCA_018128265.1_03893	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	477	631	73.69	44.33	476	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP072388.1	7956	9389
GCA_018128265.1	GCA_018128265.1_03894	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	224	218	93.12	50.98	204	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP072388.1	9436	10110
GCA_019552065.1	GCA_019552065.1_01466	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP071096.1	1466828	1468747
GCA_019552065.1	GCA_019552065.1_01474	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP071096.1	1478667	1479404
GCA_019552065.1	GCA_019552065.1_01703	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.02	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP071096.1	1733261	1734739
GCA_022690185.1	GCA_022690185.1_00085	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCVX010000012.1	3818	5284
GCA_022690185.1	GCA_022690185.1_00100	fosB	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_032488468.1	fosfomycin resistance bacillithiol transferase FosB	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	JALCVX010000012.1	18625	19044
GCA_022690185.1	GCA_022690185.1_00184	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	354	350	97.71	53.64	343	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCVX010000015.1	6231	7295
GCA_022690185.1	GCA_022690185.1_00195	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCVX010000015.1	13561	14121
GCA_022690185.1	GCA_022690185.1_00196	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCVX010000015.1	14305	15849
GCA_022690185.1	GCA_022690185.1_01756	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVX010000003.1	101031	101378
GCA_022690185.1	GCA_022690185.1_01760	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVX010000003.1	105061	106353
GCA_000338595.1	GCA_000338595.1_02233	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	EXACTP	266	266	100.00	100.00	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	KB445539.1	2436632	2437432
GCA_000338595.1	GCA_000338595.1_02234	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	KB445539.1	2437668	2438405
GCA_916049875.1	GCA_916049875.1_00141	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	94	91	97.80	67.42	89	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CAJZJA010000003.1	48815	49099
GCA_021398235.1	GCA_021398235.1_01135	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP071916.1	1061441	1061869
GCA_021398235.1	GCA_021398235.1_01228	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP071916.1	1141636	1142835
GCA_021398235.1	GCA_021398235.1_01921	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP071916.1	1792896	1793633
GCA_021398235.1	GCA_021398235.1_01932	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP071916.1	1803548	1805467
GCA_021398235.1	GCA_021398235.1_01937	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP071916.1	1807193	1808656
GCA_021398235.1	GCA_021398235.1_01938	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP071916.1	1808776	1809993
GCA_963394825.1	GCA_963394825.1_00075	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPD010000001.1	65652	67031
GCA_963394825.1	GCA_963394825.1_00628	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.66	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPD010000003.1	132841	134079
GCA_963394825.1	GCA_963394825.1_01235	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.24	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPD010000007.1	55906	57432
GCA_009648895.1	GCA_009648895.1_00170	blaCSA	CSA family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	BLASTP	375	375	100.00	98.67	375	WP_004384957.1	class C beta-lactamase CSA-2	NF033698.1	CSA family class C beta-lactamase	CP045778.1	183432	184559
GCA_009648895.1	GCA_009648895.1_00237	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	95.83	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP045778.1	252141	252719
GCA_009648895.1	GCA_009648895.1_00241	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	193	193	100.00	93.78	193	AAA86846.1	tellurium resistance-associated protein TerZ	NA	NA	CP045778.1	255466	256047
GCA_009648895.1	GCA_009648895.1_00248	terW	tellurium resistance protein TerW	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	155	155	100.00	99.35	155	AAC44736.1	tellurium resistance protein TerW	NA	NA	CP045778.1	262617	263084
GCA_009648895.1	GCA_009648895.1_00330	fos	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	88.15	135	WP_015741374.1	FosA family fosfomycin resistance glutathione transferase	NF000339.2	FosA family fosfomycin resistance glutathione transferase	CP045778.1	347811	348221
GCA_009648895.1	GCA_009648895.1_02084	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP045778.1	2153225	2154625
GCA_009648895.1	GCA_009648895.1_02085	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP045778.1	2154622	2155302
GCA_009648895.1	GCA_009648895.1_02086	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	BLASTP	309	309	100.00	99.68	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP045778.1	2155357	2156286
GCA_009648895.1	GCA_009648895.1_02087	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP045778.1	2156291	2156671
GCA_009648895.1	GCA_009648895.1_02088	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP045778.1	2156711	2157607
GCA_009648895.1	GCA_009648895.1_02089	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.67	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP045778.1	2157607	2159424
GCA_009648895.1	GCA_009648895.1_02093	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	95.10	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP045778.1	2161406	2163853
GCA_009648895.1	GCA_009648895.1_02095	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.66	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP045778.1	2164507	2167653
GCA_009648895.1	GCA_009648895.1_02096	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	96.28	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP045778.1	2167664	2168956
GCA_009648895.1	GCA_009648895.1_02097	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	97.44	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP045778.1	2169070	2169423
GCA_009648895.1	GCA_009648895.1_02098	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.05	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP045778.1	2169451	2170836
GCA_009648895.1	GCA_009648895.1_02099	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP045778.1	2171026	2171706
GCA_009648895.1	GCA_009648895.1_02100	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	493	491	100.00	98.57	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP045778.1	2171699	2173180
GCA_009648895.1	GCA_009648895.1_02101	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	EXACTP	143	143	100.00	100.00	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP045778.1	2173425	2173856
GCA_009648895.1	GCA_009648895.1_02208	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	86.96	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP045778.1	2298323	2299225
GCA_009648895.1	GCA_009648895.1_04290	cpa	omptin family outer membrane protease Cpa	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	ASR82161.1	omptin family outer membrane protease Cpa	NA	NA	CP045779.1	83647	84585
GCA_003443955.1	GCA_003443955.1_00346	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	CP010901.1	381040	381981
GCA_030515775.1	GCA_030515775.1_01954	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.42	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100368.1	2099670	2100524
GCA_005890605.1	GCA_005890605.1_01801	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQS01000083.1	29145	30278
GCA_005890605.1	GCA_005890605.1_02233	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	SOQS01000092.1	6102	6839
GCA_005890605.1	GCA_005890605.1_02234	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	SOQS01000092.1	7946	9865
GCA_003691635.1	GCA_003691635.1_01147	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.41	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP033168.1	1134582	1135976
GCA_006439155.1	GCA_006439155.1_01331	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	SDPG01000031.1	789	2183
GCA_006439155.1	GCA_006439155.1_01488	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	SDPG01000040.1	1698	3338
GCA_002386365.1	GCA_002386365.1_01652	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	639	92.80	98.82	593	WP_050618045.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP023510.1	2034376	2036163
GCA_002386365.1	GCA_002386365.1_01655	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP023510.1	2038317	2039171
GCA_000759075.1	GCA_000759075.1_00261	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JRNJ01000019.1	88460	90385
GCA_000759075.1	GCA_000759075.1_01564	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JRNJ01000061.1	81720	82910
GCA_029023845.1	GCA_029023845.1_00401	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP118973.1	435657	436949
GCA_002204405.1	GCA_002204405.1_02138	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	NHRV01000002.1	396762	397727
GCA_002204405.1	GCA_002204405.1_02155	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	NHRV01000002.1	418970	419770
GCA_000069945.1	GCA_000069945.1_00283	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	520	513	100.00	97.66	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	AM942444.1	341944	343506
GCA_000069945.1	GCA_000069945.1_00644	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AM942444.1	752734	754155
GCA_000069945.1	GCA_000069945.1_00757	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	AM942444.1	886899	888074
GCA_000069945.1	GCA_000069945.1_01573	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	AM942444.1	1792097	1792912
GCA_000069945.1	GCA_000069945.1_01576	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	AM942444.1	1794597	1795016
GCA_000069945.1	GCA_000069945.1_01577	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	209	278	75.18	99.52	209	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	AM942444.1	1795223	1795852
GCA_000069945.1	GCA_000069945.1_01578	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	AM942444.1	1796056	1797231
GCA_000069945.1	GCA_000069945.1_01607	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.33	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	AM942444.1	1827504	1829285
GCA_000069945.1	GCA_000069945.1_01966	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	AM942444.1	2241123	2241977
GCA_015099135.1	GCA_015099135.1_01339	blaCTX-M-115	extended-spectrum class A beta-lactamase CTX-M-115	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_035895532.1	extended-spectrum class A beta-lactamase CTX-M-115	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	AP022665.1	1372782	1373657
GCA_015099135.1	GCA_015099135.1_03022	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	142	139	100.00	80.58	139	WP_004857515.1	FosA family fosfomycin resistance glutathione transferase	NF000221.4	FosA family fosfomycin resistance glutathione transferase	AP022665.1	3072310	3072738
GCA_015099135.1	GCA_015099135.1_03686	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	731	100.00	82.63	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	AP022665.1	3770084	3772282
GCA_015099135.1	GCA_015099135.1_03751	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	98.94	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	AP022665.1	3841430	3841999
GCA_015099135.1	GCA_015099135.1_03752	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	99.47	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	AP022665.1	3842105	3844954
GCA_015099135.1	GCA_015099135.1_03755	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	EXACTP	152	152	100.00	100.00	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	AP022665.1	3847099	3847557
GCA_015099135.1	GCA_015099135.1_03756	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.67	304	APX31172.1	heat resistance protein YfdX1	NA	NA	AP022665.1	3847580	3848494
GCA_015099135.1	GCA_015099135.1_03757	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	97.97	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	AP022665.1	3848597	3849484
GCA_015099135.1	GCA_015099135.1_03758	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	97.54	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	AP022665.1	3849574	3850185
GCA_015099135.1	GCA_015099135.1_03760	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	98.63	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	AP022665.1	3851400	3851840
GCA_015099135.1	GCA_015099135.1_03761	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	571	571	100.00	98.07	571	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	AP022665.1	3851844	3853559
GCA_015099135.1	GCA_015099135.1_03762	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	98.18	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	AP022665.1	3853556	3854053
GCA_015099135.1	GCA_015099135.1_04663	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	90.17	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	AP022665.1	4781293	4782186
GCA_015099135.1	GCA_015099135.1_04897	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	AP022666.1	93412	93648
GCA_015099135.1	GCA_015099135.1_04898	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	AP022666.1	93645	94010
GCA_015099135.1	GCA_015099135.1_04899	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	93.05	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AP022666.1	94028	95713
GCA_015099135.1	GCA_015099135.1_04900	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	AP022666.1	95752	96177
GCA_015099135.1	GCA_015099135.1_04901	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	85.71	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	AP022666.1	96205	96480
GCA_015099135.1	GCA_015099135.1_04902	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	99.14	116	CAA70196.1	mercuric transport protein MerT	NA	NA	AP022666.1	96496	96846
GCA_015099135.1	GCA_015099135.1_04903	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	AP022666.1	96918	97373
GCA_015099135.1	GCA_015099135.1_04936	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	99.29	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	AP022666.1	126088	126513
GCA_015099135.1	GCA_015099135.1_04937	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.37	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	AP022666.1	126526	127815
GCA_015099135.1	GCA_015099135.1_04938	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	99.14	583	AAB09626.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	AP022666.1	127864	129615
GCA_015099135.1	GCA_015099135.1_04939	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	98.33	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP022666.1	129633	129995
GCA_015099135.1	GCA_015099135.1_04940	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	AAB09624.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	AP022666.1	130043	130396
GCA_015099135.1	GCA_015099135.1_04960	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	AP022666.1	158692	159147
GCA_015099135.1	GCA_015099135.1_04961	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	99.14	116	CAA70196.1	mercuric transport protein MerT	NA	NA	AP022666.1	159219	159569
GCA_015099135.1	GCA_015099135.1_04962	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	85.71	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	AP022666.1	159585	159860
GCA_015099135.1	GCA_015099135.1_04963	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	AP022666.1	159888	160313
GCA_015099135.1	GCA_015099135.1_04964	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	93.05	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AP022666.1	160352	162037
GCA_015099135.1	GCA_015099135.1_04965	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	AP022666.1	162055	162420
GCA_015099135.1	GCA_015099135.1_04966	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	AP022666.1	162417	162653
GCA_015099135.1	GCA_015099135.1_05164	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.44	429	AAB42204.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	AP022667.1	21529	22818
GCA_015099135.1	GCA_015099135.1_05165	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	142	141	100.00	91.49	141	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	AP022667.1	22831	23259
GCA_015099135.1	GCA_015099135.1_05182	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	99.47	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	AP022667.1	33766	34335
GCA_015099135.1	GCA_015099135.1_05183	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	931	949	97.89	99.14	929	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	AP022667.1	34441	37236
GCA_015099135.1	GCA_015099135.1_05211	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	AP022667.1	64835	65674
GCA_015099135.1	GCA_015099135.1_05212	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	AP022667.1	65668	66015
GCA_015099135.1	GCA_015099135.1_05213	aac(6)-IIc	aminoglycoside N-acetyltransferase AAC(6)-IIc	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	193	193	100.00	100.00	193	WP_012695484.1	aminoglycoside N-acetyltransferase AAC(6)-IIc	NF000135.2	aminoglycoside N-acetyltransferase AAC(6)-IIc	AP022667.1	66254	66835
GCA_015099135.1	GCA_015099135.1_05214	blaIMP-1	subclass B1 metallo-beta-lactamase IMP-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	246	246	100.00	100.00	246	WP_003159548.1	subclass B1 metallo-beta-lactamase IMP-1	NF012147.1	IMP family subclass B1 metallo-beta-lactamase	AP022667.1	66985	67725
GCA_015099135.1	GCA_015099135.1_05226	dfrA25	trimethoprim-resistant dihydrofolate reductase DfrA25	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	157	157	100.00	100.00	157	WP_029391998.1	trimethoprim-resistant dihydrofolate reductase DfrA25	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	AP022667.1	73887	74360
GCA_015099135.1	GCA_015099135.1_05227	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	AP022667.1	74544	74891
GCA_015099135.1	GCA_015099135.1_05228	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	AP022667.1	74885	75724
GCA_015099135.1	GCA_015099135.1_05234	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	93.66	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	AP022667.1	81043	81498
GCA_015099135.1	GCA_015099135.1_05235	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	96.55	116	AAA98222.1	mercuric transport protein MerT	NA	NA	AP022667.1	81570	81920
GCA_015099135.1	GCA_015099135.1_05236	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	93	91	100.00	93.55	93	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	AP022667.1	81936	82217
GCA_015099135.1	GCA_015099135.1_05237	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	125	140	83.57	82.05	117	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	AP022667.1	82245	82622
GCA_013488045.1	GCA_013488045.1_00081	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.09	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP054134.1	104059	105954
GCA_013488045.1	GCA_013488045.1_01415	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP054134.1	1390280	1390708
GCA_030176655.1	GCA_030176655.1_01480	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUC010000005.1	245	1099
GCA_027277305.1	GCA_027277305.1_00212	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.18	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAPXGM010000001.1	204802	205533
GCA_014610885.1	GCA_014610885.1_00056	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	PGGG01000010.1	50259	51074
GCA_014610885.1	GCA_014610885.1_00059	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	PGGG01000010.1	52759	53178
GCA_014610885.1	GCA_014610885.1_00060	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	PGGG01000010.1	53178	54014
GCA_014610885.1	GCA_014610885.1_00393	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PGGG01000013.1	155135	156577
GCA_014610885.1	GCA_014610885.1_00463	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.61	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	PGGG01000013.1	226245	227786
GCA_014610885.1	GCA_014610885.1_00465	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.30	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	PGGG01000013.1	229383	230237
GCA_014610885.1	GCA_014610885.1_00474	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	392	391	100.00	98.21	392	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	PGGG01000013.1	235626	236804
GCA_014610885.1	GCA_014610885.1_01227	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	PGGG01000003.1	7074	8855
GCA_028322385.1	GCA_028322385.1_00653	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	94.68	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAQLYA010000001.1	42134	44053
GCA_028322385.1	GCA_028322385.1_00819	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	598	593	98.99	33.50	603	WP_012705551.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	JAQLYA010000001.1	219452	221248
GCA_024758205.1	GCA_024758205.1_01337	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103067.1	1640870	1641835
GCA_024758205.1	GCA_024758205.1_03494	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103067.1	3980341	3981300
GCA_024758205.1	GCA_024758205.1_04334	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	170	170	100.00	99.41	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	CP103067.1	4885252	4885764
GCA_024758205.1	GCA_024758205.1_04335	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.25	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	CP103067.1	4885789	4886994
GCA_003857145.1	GCA_003857145.1_00557	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	RCTS01000001.1	571015	572088
GCA_003857145.1	GCA_003857145.1_00606	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	70.07	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	RCTS01000001.1	630722	631144
GCA_003857145.1	GCA_003857145.1_01013	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	RCTS01000013.1	164	487
GCA_003857145.1	GCA_003857145.1_01070	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	RCTS01000018.1	1477	2856
GCA_003857145.1	GCA_003857145.1_01108	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	RCTS01000002.1	18107	18952
GCA_003857145.1	GCA_003857145.1_01109	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	RCTS01000002.1	19059	20816
GCA_003857145.1	GCA_003857145.1_01110	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	RCTS01000002.1	20806	21186
GCA_003857145.1	GCA_003857145.1_01112	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	RCTS01000002.1	21493	22782
GCA_003857145.1	GCA_003857145.1_01173	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	RCTS01000020.1	1563	2297
GCA_003857145.1	GCA_003857145.1_02481	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	RCTS01000006.1	8073	8453
GCA_003857145.1	GCA_003857145.1_02482	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	RCTS01000006.1	8443	10200
GCA_003857145.1	GCA_003857145.1_02483	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	RCTS01000006.1	10307	11152
GCA_023277705.1	GCA_023277705.1_00374	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP083176.1	455570	456424
GCA_003625665.1	GCA_003625665.1_00690	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHD01000002.1	112146	113087
GCA_002155695.1	GCA_002155695.1_00221	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	148	148	100.00	85.14	148	WP_318245539.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	MUYJ01000011.1	62993	63439
GCA_002155695.1	GCA_002155695.1_00518	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	482	631	74.33	47.77	471	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	MUYJ01000014.1	1631	3079
GCA_002155695.1	GCA_002155695.1_00520	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	HMM	85	81	88.89	58.33	72	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	MUYJ01000014.1	4461	4718
GCA_002155695.1	GCA_002155695.1_02339	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	311	302	95.70	40.53	301	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	MUYJ01000005.1	207958	208893
GCA_030435855.1	GCA_030435855.1_00042	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP129362.1	42552	44558
GCA_030435855.1	GCA_030435855.1_00051	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP129362.1	50704	51105
GCA_030435855.1	GCA_030435855.1_00052	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP129362.1	51123	52412
GCA_030435855.1	GCA_030435855.1_00072	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP129362.1	70923	71315
GCA_030435855.1	GCA_030435855.1_00073	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP129362.1	71333	72625
GCA_030435855.1	GCA_030435855.1_00155	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.79	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP129362.1	147301	148593
GCA_030435855.1	GCA_030435855.1_02561	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP129363.1	11278	12123
GCA_030435855.1	GCA_030435855.1_02562	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP129363.1	12230	13987
GCA_030435855.1	GCA_030435855.1_02563	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP129363.1	13977	14357
GCA_030435855.1	GCA_030435855.1_02566	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP129363.1	16143	16703
GCA_030435855.1	GCA_030435855.1_02567	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP129363.1	16887	18431
GCA_001590945.1	GCA_001590945.1_01013	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	140	141	98.58	77.70	139	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	BCTV01000005.1	94310	94732
GCA_001590945.1	GCA_001590945.1_01028	crcB	fluoride efflux transporter CrcB	plus	STRESS	BIOCIDE	FLUORIDE	FLUORIDE	EXACTP	137	137	100.00	100.00	137	CCN31428.1	fluoride efflux transporter CrcB	NA	NA	BCTV01000005.1	105900	106313
GCA_001590945.1	GCA_001590945.1_01134	blaSHV	SHV family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	322	286	100.00	100.00	286	WP_001620095.1	broad-spectrum class A beta-lactamase SHV-1	NF000285.3	SHV family class A beta-lactamase	BCTV01000006.1	19322	20290
GCA_001590945.1	GCA_001590945.1_02431	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	410	410	100.00	100.00	410	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	BCTV01000015.1	51814	53046
GCA_001590945.1	GCA_001590945.1_03117	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	98.98	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	BCTV01000022.1	19502	20686
GCA_001590945.1	GCA_001590945.1_03255	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	BCTV01000023.1	58546	59448
GCA_001590945.1	GCA_001590945.1_03327	oqxA10	multidrug efflux RND transporter periplasmic adaptor subunit OqxA10	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	ALLELEP	391	391	100.00	100.00	391	WP_004149398.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA10	NF000272.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	BCTV01000024.1	30631	31806
GCA_001590945.1	GCA_001590945.1_03328	oqxB19	multidrug efflux RND transporter permease subunit OqxB19	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	ALLELEP	1050	1050	100.00	100.00	1050	WP_004149399.1	multidrug efflux RND transporter permease subunit OqxB19	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	BCTV01000024.1	31830	34982
GCA_001590945.1	GCA_001590945.1_03457	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	140	139	99.28	99.28	138	WP_004146118.1	FosA5 family fosfomycin resistance glutathione transferase	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	BCTV01000025.1	72911	73333
GCA_001590945.1	GCA_001590945.1_03976	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.83	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	BCTV01000033.1	3067	4869
GCA_001590945.1	GCA_001590945.1_03977	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	570	600	95.00	99.30	570	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	BCTV01000033.1	4856	6568
GCA_001590945.1	GCA_001590945.1_04008	clbN	colibactin non-ribosomal peptide synthetase ClbN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1455	1455	100.00	99.59	1455	AMH08480.1	colibactin non-ribosomal peptide synthetase ClbN	NA	NA	BCTV01000033.1	54468	58835
GCA_001590945.1	GCA_001590945.1_04424	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	116	102	100.00	56.91	123	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	BCTV01000042.1	33679	34029
GCA_001590945.1	GCA_001590945.1_04621	clbB	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	3206	3206	100.00	99.66	3206	AMQ58400.1	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	NA	NA	BCTV01000049.1	18773	28393
GCA_001590945.1	GCA_001590945.1_05061	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	391	371	95.96	89.33	356	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	BCTV01000073.1	2697	3872
GCA_001590945.1	GCA_001590945.1_05062	rmpC	mucoid phenotype regulator RmpC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	183	133	100.00	88.72	133	AIK83625.1	mucoid phenotype regulator RmpC	NA	NA	BCTV01000073.1	4447	4998
GCA_001590945.1	GCA_001590945.1_05063	rmpA	mucoid phenotype regulator RmpA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	210	210	100.00	98.10	210	AMA27886.1	mucoid phenotype regulator RmpA	NA	NA	BCTV01000073.1	5387	6019
GCA_000259485.1	GCA_000259485.1_01237	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AJMW01000055.1	32173	32595
GCA_018127725.1	GCA_018127725.1_00706	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP072329.1	658093	660012
GCA_018127725.1	GCA_018127725.1_01607	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	92.03	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CP072329.1	1550109	1551845
GCA_018127725.1	GCA_018127725.1_01608	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.29	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CP072329.1	1551847	1553571
GCA_001023515.1	GCA_001023515.1_02914	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	PARTIALP	865	949	74.29	96.88	705	ASF80763.1	heat shock survival AAA family ATPase ClpK	NA	NA	JSYI01000101.1	57530	60127
GCA_001023515.1	GCA_001023515.1_02917	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	91.10	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	JSYI01000101.1	63732	64172
GCA_001023515.1	GCA_001023515.1_03204	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	JSYI01000123.1	26264	26500
GCA_001023515.1	GCA_001023515.1_03205	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	98.35	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	JSYI01000123.1	26497	26862
GCA_001023515.1	GCA_001023515.1_03206	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	548	561	100.00	85.38	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JSYI01000123.1	26879	28525
GCA_001023515.1	GCA_001023515.1_03207	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	81	81	100.00	100.00	81	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	JSYI01000123.1	28522	28767
GCA_001023515.1	GCA_001023515.1_03208	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	98.90	93.33	90	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JSYI01000123.1	28770	29045
GCA_001023515.1	GCA_001023515.1_03209	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	AAA98222.1	mercuric transport protein MerT	NA	NA	JSYI01000123.1	29061	29411
GCA_001023515.1	GCA_001023515.1_03210	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	95.14	144	BAA36431.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	JSYI01000123.1	29483	29917
GCA_001023515.1	GCA_001023515.1_03285	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	91.52	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	JSYI01000128.1	165	662
GCA_026782305.1	GCA_026782305.1_00216	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKUWF010000001.1	221673	222101
GCA_026782305.1	GCA_026782305.1_01868	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	99.71	346	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	JAKUWF010000008.1	49553	50593
GCA_026782305.1	GCA_026782305.1_01869	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAKUWF010000008.1	51702	52439
GCA_027689395.1	GCA_027689395.1_00947	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAQFEP010000002.1	32885	33730
GCA_027689395.1	GCA_027689395.1_00948	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAQFEP010000002.1	33837	35594
GCA_027689395.1	GCA_027689395.1_00949	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAQFEP010000002.1	35584	35964
GCA_027689395.1	GCA_027689395.1_01703	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAQFEP010000005.1	37734	39026
GCA_027689395.1	GCA_027689395.1_01707	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQFEP010000005.1	42709	43056
GCA_027689395.1	GCA_027689395.1_02109	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAQFEP010000009.1	3122	3688
GCA_027689395.1	GCA_027689395.1_02110	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAQFEP010000009.1	3866	5410
GCA_902480415.1	GCA_902480415.1_00811	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	123	123	100.00	47.62	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABSSR010000119.1	466	837
GCA_003493545.1	GCA_003493545.1_01950	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQKD01000020.1	8517	9911
GCA_000478095.1	GCA_000478095.1_00132	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515749.1	143416	144270
GCA_027687775.1	GCA_027687775.1_00176	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQCQD010000001.1	169850	170278
GCA_027687775.1	GCA_027687775.1_01820	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQCQD010000007.1	32222	34141
GCA_027687775.1	GCA_027687775.1_01831	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQCQD010000007.1	44056	44793
GCA_001837905.1	GCA_001837905.1_01060	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV834641.1	6097	7560
GCA_001837905.1	GCA_001837905.1_01061	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV834641.1	7680	8897
GCA_001837905.1	GCA_001837905.1_01222	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	KV834646.1	89043	90767
GCA_001837905.1	GCA_001837905.1_01223	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.84	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	KV834646.1	90769	92505
GCA_022815285.1	GCA_022815285.1_01056	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALGYS010000018.1	2130	3674
GCA_022815285.1	GCA_022815285.1_01057	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALGYS010000018.1	3858	4418
GCA_022815285.1	GCA_022815285.1_01059	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JALGYS010000018.1	5717	6616
GCA_022815285.1	GCA_022815285.1_01457	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALGYS010000020.1	2659	3039
GCA_022815285.1	GCA_022815285.1_01458	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	96.41	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALGYS010000020.1	3029	4786
GCA_022815285.1	GCA_022815285.1_01459	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALGYS010000020.1	4893	5738
GCA_022815285.1	GCA_022815285.1_01477	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	PARTIALP	83	161	51.55	100.00	83	WP_011428879.1	lincosamide nucleotidyltransferase Lnu(A)	NA	NA	JALGYS010000025.1	2301	2552
GCA_022815285.1	GCA_022815285.1_01610	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALGYS010000003.1	130840	132132
GCA_022815285.1	GCA_022815285.1_02188	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JALGYS010000006.1	151706	153712
GCA_001812975.1	GCA_001812975.1_00080	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	639	92.80	98.82	593	WP_050618045.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV811045.1	492	2279
GCA_001812975.1	GCA_001812975.1_01628	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV811085.1	200157	201815
GCA_015274185.1	GCA_015274185.1_01807	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.55	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPS010000004.1	182942	184231
GCA_015274185.1	GCA_015274185.1_02036	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	72.26	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JACGPS010000006.1	54296	54718
GCA_015274185.1	GCA_015274185.1_02078	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACGPS010000006.1	107490	108563
GCA_015274185.1	GCA_015274185.1_02157	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPS010000007.1	60434	61723
GCA_015274185.1	GCA_015274185.1_02498	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGPS010000016.1	530	1015
GCA_017298895.1	GCA_017298895.1_01054	smdA	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	591	591	100.00	98.48	591	BAF79679.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	NA	NA	CP071210.1	1099706	1101481
GCA_017298895.1	GCA_017298895.1_01055	smdB	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	592	592	100.00	98.65	592	BAF79680.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	NA	NA	CP071210.1	1101474	1103252
GCA_017298895.1	GCA_017298895.1_01070	sdeY	multidrug efflux RND transporter permease subunit SdeY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1048	1051	99.43	95.70	1046	BAC77251.1	multidrug efflux RND transporter permease subunit SdeY	NA	NA	CP071210.1	1112542	1115688
GCA_017298895.1	GCA_017298895.1_01956	sdeB	multidrug efflux RND transporter permease subunit SdeB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1047	1047	100.00	99.62	1047	AAO18187.2	multidrug efflux RND transporter permease subunit SdeB	NA	NA	CP071210.1	2018162	2021305
GCA_017298895.1	GCA_017298895.1_01957	sdeA	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	395	395	100.00	99.75	395	AAS55383.1	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	CP071210.1	2021330	2022517
GCA_017298895.1	GCA_017298895.1_02296	blaSRT	SRT/SST family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	378	378	100.00	99.47	378	WP_063864750.1	cephalosporin-hydrolyzing class C beta-lactamase SST-1	NF000423.2	SRT/SST family class C beta-lactamase	CP071210.1	2345831	2346967
GCA_017298895.1	GCA_017298895.1_02529	tet(41)	tetracycline efflux MFS transporter Tet(41)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	388	393	98.73	95.62	388	WP_063855881.1	tetracycline efflux MFS transporter Tet(41)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP071210.1	2615278	2616444
GCA_017298895.1	GCA_017298895.1_02613	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	91	102	90.20	71.58	95	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP071210.1	2705513	2705788
GCA_017298895.1	GCA_017298895.1_02627	ssmE	multidrug efflux SMR transporter SsmE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	106	110	96.36	100.00	106	BAF80121.1	multidrug efflux SMR transporter SsmE	NA	NA	CP071210.1	2720916	2721236
GCA_017298895.1	GCA_017298895.1_02729	smfY	multidrug efflux MFS transporter SmfY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	490	490	100.00	98.37	490	BAE79899.1	multidrug efflux MFS transporter SmfY	NA	NA	CP071210.1	2836702	2838174
GCA_017298895.1	GCA_017298895.1_02876	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	139	98.56	67.15	137	WP_004857515.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP071210.1	2978268	2978675
GCA_017298895.1	GCA_017298895.1_04303	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	146	146	100.00	100.00	146	WP_033639326.1	aminoglycoside 6-N-acetyltransferase	NF000021.4	aminoglycoside 6-N-acetyltransferase	CP071210.1	4464245	4464685
GCA_017298895.1	GCA_017298895.1_04799	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	81.27	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP071210.1	4987037	4987939
GCA_026461725.1	GCA_026461725.1_01252	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAJNCR010000027.1	23809	24219
GCA_013393365.1	GCA_013393365.1_01597	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	AP022321.1	1695938	1696675
GCA_013393365.1	GCA_013393365.1_01598	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AP022321.1	1697600	1699519
GCA_008330865.1	GCA_008330865.1_00456	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP021523.1	460300	461679
GCA_008330865.1	GCA_008330865.1_01167	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP021523.1	1206890	1207795
GCA_008330865.1	GCA_008330865.1_01286	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.82	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP021523.1	1339139	1340377
GCA_008330865.1	GCA_008330865.1_01287	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP021523.1	1340781	1341413
GCA_008330865.1	GCA_008330865.1_01289	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP021523.1	1342238	1343806
GCA_008330865.1	GCA_008330865.1_01475	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP021523.1	1547393	1548919
GCA_003943095.1	GCA_003943095.1_00788	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.59	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RJOM01000002.1	124273	126192
GCA_003943095.1	GCA_003943095.1_00797	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RJOM01000002.1	134984	135721
GCA_023110415.1	GCA_023110415.1_00437	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.74	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JALDWA010000001.1	413616	414815
GCA_023110415.1	GCA_023110415.1_00597	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDWA010000001.1	587577	589040
GCA_023110415.1	GCA_023110415.1_00598	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDWA010000001.1	589160	590377
GCA_023110415.1	GCA_023110415.1_01203	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALDWA010000002.1	411716	413635
GCA_002763735.1	GCA_002763735.1_00493	blaOXA-85	oxacillin-hydrolyzing class D beta-lactamase OXA-85	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	261	261	100.00	100.00	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	CP024701.1	472034	472819
GCA_025398895.1	GCA_025398895.1_00605	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	278	257	99.61	40.07	267	WP_063839879.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	CP104728.1	626915	627751
GCA_025398895.1	GCA_025398895.1_01308	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	228	232	98.71	72.61	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CP104728.1	1368472	1369158
GCA_025398895.1	GCA_025398895.1_01910	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	144	100.00	54.86	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP104728.1	1970285	1970719
GCA_025398895.1	GCA_025398895.1_02395	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	81.50	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP104728.1	2418040	2419518
GCA_025398895.1	GCA_025398895.1_04426	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	141	140	100.00	75.00	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP104728.1	4352239	4352664
GCA_025398895.1	GCA_025398895.1_04519	msr	Msr family ABC-F type ribosomal protection protein	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	482	485	99.18	71.73	481	WP_101035417.1	Msr family ABC-F type ribosomal protection protein	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP104728.1	4429304	4430752
GCA_004346925.1	GCA_004346925.1_01294	emrC	multidrug efflux transporter outer membrane subunit EmrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	497	497	100.00	96.78	497	CAQ45062.1	multidrug efflux transporter outer membrane subunit EmrC	NA	NA	CP031167.1	1399820	1401313
GCA_004346925.1	GCA_004346925.1_01295	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	392	393	100.00	99.49	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	CP031167.1	1401325	1402503
GCA_004346925.1	GCA_004346925.1_01296	emrB	multidrug efflux MFS transporter permease subunit EmrB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	528	528	100.00	99.24	528	CAQ45064.1	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	CP031167.1	1402511	1404097
GCA_004346925.1	GCA_004346925.1_01834	aph(3)-IIc	aminoglycoside O-phosphotransferase APH(3)-IIc	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	267	267	100.00	92.88	267	WP_012479999.1	aminoglycoside O-phosphotransferase APH(3)-IIc	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP031167.1	1926471	1927274
GCA_004346925.1	GCA_004346925.1_02266	blaL1	L1 family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	290	290	100.00	90.34	290	WP_063842669.1	L1 family subclass B3 metallo-beta-lactamase	NF033106.1	L1 family subclass B3 metallo-beta-lactamase	CP031167.1	2411644	2412516
GCA_004346925.1	GCA_004346925.1_03249	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	304	100.00	69.74	304	WP_063842700.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP031167.1	3483402	3484313
GCA_004346925.1	GCA_004346925.1_03603	smeF	multidrug efflux RND transporter outer membrane subunit SmeF	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	461	466	98.93	99.13	461	CAC14596.1	multidrug efflux RND transporter outer membrane subunit SmeF	NA	NA	CP031167.1	3889308	3890693
GCA_004346925.1	GCA_004346925.1_03689	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	395	100.00	59.75	395	WP_031633255.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP031167.1	3985747	3986934
GCA_004346925.1	GCA_004346925.1_03921	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	144	150	85.33	56.25	128	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP031167.1	4228318	4228752
GCA_003493185.1	GCA_003493185.1_01003	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQKV01000002.1	79772	81010
GCA_003493185.1	GCA_003493185.1_01004	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	96.67	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQKV01000002.1	81027	81890
GCA_003493185.1	GCA_003493185.1_01006	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.55	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQKV01000002.1	82682	84250
GCA_003493185.1	GCA_003493185.1_01818	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQKV01000005.1	136426	137331
GCA_003493185.1	GCA_003493185.1_01989	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	95.87	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQKV01000007.1	14277	15803
GCA_900006675.1	GCA_900006675.1_00004	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	99.07	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	FBVO01000005.1	1776	2099
GCA_900006675.1	GCA_900006675.1_00007	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	99.07	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	FBVO01000005.1	4164	4487
GCA_900006675.1	GCA_900006675.1_01989	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	FBVO01000001.1	1783021	1783401
GCA_900006675.1	GCA_900006675.1_01990	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	FBVO01000001.1	1783391	1785148
GCA_900006675.1	GCA_900006675.1_01991	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	FBVO01000001.1	1785255	1786100
GCA_900006675.1	GCA_900006675.1_02193	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	FBVO01000001.1	2003804	2004151
GCA_900006675.1	GCA_900006675.1_02196	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	FBVO01000001.1	2006319	2007608
GCA_017086425.1	GCA_017086425.1_00403	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP070964.1	416116	417408
GCA_017086425.1	GCA_017086425.1_02443	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP070965.1	6649	8115
GCA_017086425.1	GCA_017086425.1_02480	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	522	522	100.00	100.00	522	WP_032492560.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP070966.1	356	1924
GCA_017086425.1	GCA_017086425.1_02487	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP070967.1	466	1209
GCA_000195855.1	GCA_000195855.1_03797	aac(2)-Ie	aminoglycoside N-acetyltransferase AAC(2)-Ie	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	182	182	100.00	100.00	182	WP_010908954.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	NF000054.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	AL450380.1	3039192	3039740
GCA_013277175.1	GCA_013277175.1_01157	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMML01000041.1	387	1520
GCA_916444975.1	GCA_916444975.1_00981	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	PARTIALP	215	245	84.90	99.52	208	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAKAIS010000001.1	778854	779501
GCA_025170665.2	GCA_025170665.2_00402	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	459	459	100.00	100.00	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP098472.2	391413	392792
GCA_025170665.2	GCA_025170665.2_01299	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	412	412	100.00	100.00	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP098472.2	1253596	1254834
GCA_025170665.2	GCA_025170665.2_01300	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	214	210	89.52	100.00	188	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP098472.2	1255085	1255729
GCA_025170665.2	GCA_025170665.2_01302	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	99.23	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP098472.2	1256352	1257920
GCA_025170665.2	GCA_025170665.2_01683	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	280	301	91.36	98.18	275	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP098472.2	1626763	1627605
GCA_025170665.2	GCA_025170665.2_01763	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	507	100.00	99.80	507	AAD54074.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP098472.2	1699407	1700930
GCA_009759685.1	GCA_009759685.1_00221	blaADC-158	extended-spectrum class C beta-lactamase ADC-158	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	383	383	100.00	100.00	383	WP_001211227.1	extended-spectrum class C beta-lactamase ADC-158	NF000425.2	ADC family extended-spectrum class C beta-lactamase	CP046654.1	194052	195203
GCA_009759685.1	GCA_009759685.1_00408	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	397	397	100.00	100.00	397	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP046654.1	403662	404855
GCA_009759685.1	GCA_009759685.1_01348	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP046654.1	1404820	1405635
GCA_009759685.1	GCA_009759685.1_01464	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001112624.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	CP046654.1	1528443	1529231
GCA_009759685.1	GCA_009759685.1_01899	nreB	nickel resistance MFS transporter NreB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	416	416	100.00	98.08	416	ADY84088.1	nickel resistance MFS transporter NreB	NA	NA	CP046654.1	1982976	1984226
GCA_009759685.1	GCA_009759685.1_02456	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	91.67	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP046654.1	2542030	2542464
GCA_009759685.1	GCA_009759685.1_02458	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP046654.1	2543203	2543628
GCA_009759685.1	GCA_009759685.1_02459	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	96.26	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP046654.1	2543667	2545352
GCA_009759685.1	GCA_009759685.1_02840	abaF	fosfomycin efflux MFS transporter AbaF	plus	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	429	429	100.00	100.00	429	ABO11759.2	fosfomycin efflux MFS transporter AbaF	NA	NA	CP046654.1	2928551	2929840
GCA_009759685.1	GCA_009759685.1_03089	blaOXA-98	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_001021777.1	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	NF000268.2	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase	CP046654.1	3190153	3190977
GCA_009759685.1	GCA_009759685.1_03646	amvA	multidrug efflux MFS transporter AmvA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	492	492	100.00	98.98	492	ACQ82816.1	multidrug efflux MFS transporter AmvA	NA	NA	CP046654.1	3776036	3777514
GCA_000163895.2	GCA_000163895.2_01133	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.28	639	WP_011860841.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP002390.1	1251073	1252992
GCA_023110055.1	GCA_023110055.1_00569	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDVG010000001.1	591054	592517
GCA_023110055.1	GCA_023110055.1_00570	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDVG010000001.1	592637	593854
GCA_024295425.1	GCA_024295425.1_00992	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JANCPF010000003.1	23487	25406
GCA_024295425.1	GCA_024295425.1_01252	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	89.44	61.42	127	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPF010000004.1	14011	14439
GCA_024295425.1	GCA_024295425.1_01257	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPF010000004.1	17410	18627
GCA_024295425.1	GCA_024295425.1_01258	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPF010000004.1	18747	20210
GCA_024295425.1	GCA_024295425.1_01263	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPF010000004.1	22160	22588
GCA_000006605.1	GCA_000006605.1_00374	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	96.88	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CR931997.1	433897	435438
GCA_000006605.1	GCA_000006605.1_00434	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CR931997.1	494353	496134
GCA_000006605.1	GCA_000006605.1_01470	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CR931997.1	1664779	1665954
GCA_000006605.1	GCA_000006605.1_01502	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CR931997.1	1693700	1694554
GCA_000006605.1	GCA_000006605.1_01507	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CR931997.1	1699014	1700435
GCA_000382965.1	GCA_000382965.1_00033	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	HE579065.1	38653	40659
GCA_000382965.1	GCA_000382965.1_00034	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	HE579065.1	40759	41745
GCA_000382965.1	GCA_000382965.1_00108	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	HE579065.1	127483	128841
GCA_000382965.1	GCA_000382965.1_00304	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	HE579065.1	355803	357158
GCA_000382965.1	GCA_000382965.1_00341	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	HE579065.1	390471	391082
GCA_000382965.1	GCA_000382965.1_00803	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579065.1	849325	850107
GCA_000382965.1	GCA_000382965.1_00804	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579065.1	850233	850964
GCA_000382965.1	GCA_000382965.1_01582	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579065.1	1664192	1664923
GCA_000382965.1	GCA_000382965.1_01583	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579065.1	1665049	1665831
GCA_000382965.1	GCA_000382965.1_01703	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	HE579065.1	1809353	1810645
GCA_000382965.1	GCA_000382965.1_01744	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	HE579065.1	1841893	1842615
GCA_000382965.1	GCA_000382965.1_01745	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	96.60	235	ABD31004.1	serine protease SplA	NA	NA	HE579065.1	1842740	1843447
GCA_000382965.1	GCA_000382965.1_01750	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	HE579065.1	1847573	1848556
GCA_000382965.1	GCA_000382965.1_01751	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	HE579065.1	1848558	1849493
GCA_000382965.1	GCA_000382965.1_01759	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	HE579065.1	1855695	1856450
GCA_000382965.1	GCA_000382965.1_01760	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	HE579065.1	1856489	1856884
GCA_000382965.1	GCA_000382965.1_01762	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	HE579065.1	1857414	1858142
GCA_000382965.1	GCA_000382965.1_01763	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	HE579065.1	1858177	1858896
GCA_000382965.1	GCA_000382965.1_01764	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	HE579065.1	1859177	1859941
GCA_000382965.1	GCA_000382965.1_01920	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	HE579065.1	1984851	1985201
GCA_000382965.1	GCA_000382965.1_01924	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	HE579065.1	1986698	1987189
GCA_000382965.1	GCA_000382965.1_01928	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	HE579065.1	1988898	1989671
GCA_000382965.1	GCA_000382965.1_01987	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	HE579065.1	2029486	2029620
GCA_000382965.1	GCA_000382965.1_02109	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579065.1	2150454	2151185
GCA_000382965.1	GCA_000382965.1_02110	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579065.1	2151311	2152093
GCA_000382965.1	GCA_000382965.1_02140	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	PARTIALP	262	480	54.58	98.09	262	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	HE579065.1	2188451	2189239
GCA_000382965.1	GCA_000382965.1_02312	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	HE579065.1	2339582	2340001
GCA_000382965.1	GCA_000382965.1_02396	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	HE579065.1	2428168	2429133
GCA_000382965.1	GCA_000382965.1_02397	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	HE579065.1	2429700	2430647
GCA_000382965.1	GCA_000382965.1_02398	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	HE579065.1	2430649	2431626
GCA_000382965.1	GCA_000382965.1_02581	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579065.1	2617563	2618294
GCA_000382965.1	GCA_000382965.1_02582	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579065.1	2618420	2619202
GCA_000382965.1	GCA_000382965.1_02630	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	HE579065.1	2673029	2674558
GCA_000382965.1	GCA_000382965.1_02664	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	HE579065.1	2717888	2718940
GCA_000382965.1	GCA_000382965.1_02711	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	EXACTP	122	122	100.00	100.00	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	HE579066.1	3067	3435
GCA_000382965.1	GCA_000382965.1_02712	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	HE579066.1	3998	4843
GCA_000382965.1	GCA_000382965.1_02713	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	HE579066.1	4950	6707
GCA_000382965.1	GCA_000382965.1_02714	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	HE579066.1	6697	7077
GCA_000382965.1	GCA_000382965.1_02719	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	HE579066.1	9560	10120
GCA_000382965.1	GCA_000382965.1_02720	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	504	514	98.05	100.00	504	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	HE579066.1	10334	11848
GCA_000382965.1	GCA_000382965.1_02738	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	216	216	100.00	100.00	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	HE579066.1	25244	25894
GCA_000382965.1	GCA_000382965.1_02739	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	HE579066.1	25976	27619
GCA_000382965.1	GCA_000382965.1_02740	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	128	128	100.00	100.00	128	ADA79992.1	mercuric transport protein MerT	NA	NA	HE579066.1	27677	28063
GCA_002096835.1	GCA_002096835.1_01193	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.74	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	NCVG01000022.1	220462	221661
GCA_002096835.1	GCA_002096835.1_01327	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	NCVG01000021.1	52303	53766
GCA_002096835.1	GCA_002096835.1_01328	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	NCVG01000021.1	53886	55103
GCA_946481935.1	GCA_946481935.1_00903	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	142	139	100.00	80.58	139	WP_004857515.1	FosA family fosfomycin resistance glutathione transferase	NF000221.4	FosA family fosfomycin resistance glutathione transferase	CAMLPP010000003.1	164603	165031
GCA_946481935.1	GCA_946481935.1_03169	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	731	100.00	82.63	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	CAMLPP010000015.1	76843	79041
GCA_946481935.1	GCA_946481935.1_03745	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	90.17	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CAMLPP010000023.1	51429	52322
GCA_946481935.1	GCA_946481935.1_03940	blaCTX-M-115	extended-spectrum class A beta-lactamase CTX-M-115	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_035895532.1	extended-spectrum class A beta-lactamase CTX-M-115	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	CAMLPP010000027.1	34178	35053
GCA_029838685.1	GCA_029838685.1_00158	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	260	259	99.61	41.76	261	WP_014386410.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	JAOBZB010000001.1	168143	168925
GCA_029838685.1	GCA_029838685.1_02666	blaPOM-1	subclass B3 metallo-beta-lactamase POM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	286	286	100.00	100.00	286	WP_044403015.1	subclass B3 metallo-beta-lactamase POM-1	NF000438.2	POM family subclass B3 metallo-beta-lactamase	JAOBZB010000025.1	32840	33700
GCA_029838685.1	GCA_029838685.1_04241	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	414	100.00	75.48	416	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	JAOBZB010000041.1	38986	40227
GCA_029838685.1	GCA_029838685.1_05643	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	213	221	95.02	68.57	210	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	JAOBZB010000009.1	96867	97508
GCA_000193775.2	GCA_000193775.2_00894	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	382	301	100.00	95.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	AEPH01000227.1	1895	3043
GCA_000193775.2	GCA_000193775.2_01251	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	AEPH01000019.1	58536	59399
GCA_000193775.2	GCA_000193775.2_01253	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	354	412	85.92	95.76	354	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	AEPH01000019.1	59589	60653
GCA_000193775.2	GCA_000193775.2_01603	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	AEPH01000009.1	70469	71848
GCA_000193775.2	GCA_000193775.2_01816	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	508	99.61	97.43	506	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	AEPH01000008.1	22681	24204
GCA_000243035.1	GCA_000243035.1_01836	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JH594523.1	220200	221390
GCA_001697325.1	GCA_001697325.1_00516	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016645.1	517405	518931
GCA_001697325.1	GCA_001697325.1_00716	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016645.1	728691	730259
GCA_001697325.1	GCA_001697325.1_00718	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016645.1	731084	731716
GCA_001697325.1	GCA_001697325.1_00719	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016645.1	732124	733362
GCA_001697325.1	GCA_001697325.1_00844	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016645.1	867758	868663
GCA_001697325.1	GCA_001697325.1_01555	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016645.1	1611517	1612896
GCA_000252205.2	GCA_000252205.2_00338	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	338	639	52.74	99.70	337	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	AILJ01000006.1	33397	34413
GCA_000252205.2	GCA_000252205.2_01274	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AILJ01000002.1	143069	144532
GCA_000252205.2	GCA_000252205.2_01275	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AILJ01000002.1	144553	145770
GCA_000252205.2	GCA_000252205.2_02024	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AILJ01000002.1	859353	860552
GCA_000252205.2	GCA_000252205.2_02088	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AILJ01000002.1	918031	918459
GCA_000307025.1	GCA_000307025.1_00367	vip	cell invasion LPXTG protein Vip	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	418	399	100.00	83.25	418	AEO24620.1	cell invasion LPXTG protein Vip	NF033201.1	cell invasion LPXTG protein Vip	FR733643.1	366523	367779
GCA_000307025.1	GCA_000307025.1_00379	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1775	1778	100.00	93.59	1778	AEO24631.1	class 1 internalin InlI	NA	NA	FR733643.1	384351	389678
GCA_000307025.1	GCA_000307025.1_00506	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	36.55	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA	FR733643.1	497301	499703
GCA_000307025.1	GCA_000307025.1_00507	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	93.65	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA	FR733643.1	499788	501680
GCA_000307025.1	GCA_000307025.1_00510	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	92.68	205	AEO24735.1	nuclear targeted protein LntA	NA	NA	FR733643.1	503380	503997
GCA_000307025.1	GCA_000307025.1_00578	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	609	605	100.00	94.14	614	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA	FR733643.1	568960	570789
GCA_000307025.1	GCA_000307025.1_00993	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	97.90	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein	FR733643.1	970561	972132
GCA_000307025.1	GCA_000307025.1_01358	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	606	598	100.00	90.76	606	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK	FR733643.1	1308595	1310415
GCA_000307025.1	GCA_000307025.1_01813	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	133	133	100.00	100.00	133	WP_003726635.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	FR733643.1	1758737	1759138
GCA_000307025.1	GCA_000307025.1_01902	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	96.62	296	AHJ03495.1	class 3 internalin InlC	NA	NA	FR733643.1	1852224	1853117
GCA_000307025.1	GCA_000307025.1_02378	arsD2	arsenite efflux transporter metallochaperone ArsD-related protein	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	103	103	100.00	100.00	103	EGJ25779.1	arsenite efflux transporter metallochaperone ArsD-related protein	NF033727.2	arsenite efflux transporter metallochaperone ArsD	FR733643.1	2325267	2325578
GCA_000307025.1	GCA_000307025.1_02379	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	579	579	100.00	100.00	579	EGJ25780.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	FR733643.1	2325598	2327337
GCA_000307025.1	GCA_000307025.1_02380	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	97	97	100.00	100.00	97	EGO5141043.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	FR733643.1	2327428	2327721
GCA_000307025.1	GCA_000307025.1_02381	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	123	123	100.00	100.00	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	FR733643.1	2327723	2328094
GCA_000307025.1	GCA_000307025.1_02382	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	121	121	100.00	100.00	121	EGJ25783.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	FR733643.1	2328227	2328592
GCA_000307025.1	GCA_000307025.1_02383	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	580	580	100.00	100.00	580	EGJ25784.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	FR733643.1	2328628	2330370
GCA_000307025.1	GCA_000307025.1_02384	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	357	359	99.44	100.00	357	EGJ25785.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	FR733643.1	2330456	2331529
GCA_000307025.1	GCA_000307025.1_02385	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	348	351	99.15	99.71	348	EGJ25786.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	FR733643.1	2331568	2332614
GCA_000307025.1	GCA_000307025.1_02390	cadC	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	118	118	100.00	100.00	118	EGJ25791.1	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	FR733643.1	2336627	2336983
GCA_000307025.1	GCA_000307025.1_02391	cadA	cadmium-translocating P-type ATPase CadA	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	700	700	100.00	100.00	700	EGJ25792.1	cadmium-translocating P-type ATPase CadA	NA	NA	FR733643.1	2337000	2339102
GCA_000307025.1	GCA_000307025.1_02620	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	383	388	98.71	95.30	383	AEO26812.1	class 3 internalin InlP	NA	NA	FR733643.1	2559537	2560688
GCA_002803965.1	GCA_002803965.1_01887	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	491	639	75.43	100.00	482	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NA	NA	CP024931.1	1962949	1964424
GCA_002803965.1	GCA_002803965.1_01892	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP024931.1	1968501	1970282
GCA_002803965.1	GCA_002803965.1_01920	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP024931.1	1991808	1992983
GCA_002803965.1	GCA_002803965.1_01922	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.28	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP024931.1	1993187	1994023
GCA_002803965.1	GCA_002803965.1_01923	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP024931.1	1994023	1994442
GCA_002803965.1	GCA_002803965.1_01926	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP024931.1	1996127	1996942
GCA_002803965.1	GCA_002803965.1_01937	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CP024931.1	2007872	2009413
GCA_002803965.1	GCA_002803965.1_01938	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP024931.1	2009676	2010530
GCA_002803965.1	GCA_002803965.1_01940	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP024931.1	2011330	2011776
GCA_026930265.1	GCA_026930265.1_00783	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	92.40	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JANRML010000001.1	291569	293110
GCA_026930265.1	GCA_026930265.1_00916	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANRML010000022.1	10481	11905
GCA_026930265.1	GCA_026930265.1_00917	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	216	87.50	46.15	195	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JANRML010000022.1	11940	12593
GCA_026930265.1	GCA_026930265.1_01958	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JANRML010000007.1	840	1694
GCA_000020465.1	GCA_000020465.1_01372	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	320	258	98.84	62.50	256	WP_094865115.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP001097.1	1377758	1378720
GCA_937893325.1	GCA_937893325.1_00034	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CALBXG010000006.1	1605	3068
GCA_937893325.1	GCA_937893325.1_00035	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CALBXG010000006.1	3188	4405
GCA_009708045.1	GCA_009708045.1_00405	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.55	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VIOG01000014.1	26805	28229
GCA_009708045.1	GCA_009708045.1_01103	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VIOG01000026.1	1123	1977
GCA_030176295.1	GCA_030176295.1_00182	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUB010000011.1	95113	95967
GCA_013010255.1	GCA_013010255.1_00143	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP046427.1	183105	185030
GCA_013010255.1	GCA_013010255.1_02433	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	308	300	98.00	51.18	297	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP046427.1	2825264	2826190
GCA_962728915.1	GCA_962728915.1_00252	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIZD010000002.1	63203	64582
GCA_962728915.1	GCA_962728915.1_00446	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIZD010000003.1	84149	85387
GCA_962728915.1	GCA_962728915.1_00447	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIZD010000003.1	85640	86272
GCA_962728915.1	GCA_962728915.1_00576	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIZD010000004.1	46873	48399
GCA_962728915.1	GCA_962728915.1_00791	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIZD010000006.1	10999	11904
GCA_001546845.1	GCA_001546845.1_01800	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	PARTIALP	276	488	56.56	99.28	276	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NA	NA	KQ958128.1	138	968
GCA_007678885.1	GCA_007678885.1_02226	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VEFK01000007.1	164428	165852
GCA_000520055.1	GCA_000520055.1_00025	espX1	type III secretion system effector EspX1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	473	473	100.00	94.29	473	ADD54679.1	type III secretion system effector EspX1	NA	NA	CP006262.1	23310	24731
GCA_000520055.1	GCA_000520055.1_00821	cif	type III secretion system effector Cif	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	275	282	97.16	99.27	274	AAQ07241.1	type III secretion system effector Cif	NA	NA	CP006262.1	827470	828297
GCA_000520055.1	GCA_000520055.1_00826	espJ	type III secretion system effector ADP-ribosyltransferase EspJ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	217	217	100.00	99.54	217	BAF96525.1	type III secretion system effector ADP-ribosyltransferase EspJ	NA	NA	CP006262.1	830709	831362
GCA_000520055.1	GCA_000520055.1_01106	tccP	Tir-cytoskeleton coupling protein TccP2	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	99.20	250	BAI31154.1	Tir-cytoskeleton coupling protein TccP2	NA	NA	CP006262.1	1110521	1111273
GCA_000520055.1	GCA_000520055.1_01240	terW	tellurium resistance protein TerW	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	155	155	100.00	99.35	155	AAC44736.1	tellurium resistance protein TerW	NA	NA	CP006262.1	1244309	1244776
GCA_000520055.1	GCA_000520055.1_01247	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	193	193	100.00	98.96	193	AAA86846.1	tellurium resistance-associated protein TerZ	NA	NA	CP006262.1	1251350	1251931
GCA_000520055.1	GCA_000520055.1_01251	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	95.31	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP006262.1	1254678	1255256
GCA_000520055.1	GCA_000520055.1_01255	iha	bifunctional siderophore receptor/adhesin Iha	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	696	696	100.00	100.00	696	AAG55323.1	bifunctional siderophore receptor/adhesin Iha	NA	NA	CP006262.1	1258673	1260763
GCA_000520055.1	GCA_000520055.1_01276	iucA	aerobactin synthase IucA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	574	576	100.00	98.61	576	EGI25746.1	aerobactin synthase IucA	NA	NA	CP006262.1	1279551	1281275
GCA_000520055.1	GCA_000520055.1_01277	iucB	N(6)-hydroxylysine O-acetyltransferase IucB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	315	315	100.00	100.00	315	AAN82074.1	N(6)-hydroxylysine O-acetyltransferase IucB	NA	NA	CP006262.1	1281276	1282223
GCA_000520055.1	GCA_000520055.1_01278	iucC	NIS family aerobactin synthetase IucC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	580	580	100.00	100.00	580	AAN82073.1	NIS family aerobactin synthetase IucC	NA	NA	CP006262.1	1282223	1283965
GCA_000520055.1	GCA_000520055.1_01279	iucD	NADPH-dependent L-lysine N(6)-monooxygenase IucD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	445	445	100.00	98.88	445	AAD44749.1	NADPH-dependent L-lysine N(6)-monooxygenase IucD	NA	NA	CP006262.1	1283962	1285299
GCA_000520055.1	GCA_000520055.1_01280	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	731	731	100.00	99.18	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	CP006262.1	1285305	1287500
GCA_000520055.1	GCA_000520055.1_01465	espK	type III secretion system effector EspK	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	453	453	100.00	100.00	453	BAB34991.1	type III secretion system effector EspK	NA	NA	CP006262.1	1432353	1433714
GCA_000520055.1	GCA_000520055.1_01499	ariR	biofilm/acid-resistance regulator AriR	plus	STRESS	ACID	NA	NA	EXACTP	88	88	100.00	100.00	88	AAC74250.1	biofilm/acid-resistance regulator AriR	NA	NA	CP006262.1	1462829	1463095
GCA_000520055.1	GCA_000520055.1_01951	nleC	type III secretion system effector zinc metalloprotease NleC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	328	328	100.00	99.70	328	BAI25473.1	type III secretion system effector zinc metalloprotease NleC	NA	NA	CP006262.1	1916073	1917059
GCA_000520055.1	GCA_000520055.1_02031	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	BLASTP	102	102	100.00	98.04	102	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP006262.1	1981645	1981953
GCA_000520055.1	GCA_000520055.1_02325	nleC	type III secretion system effector zinc metalloprotease NleC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	328	328	100.00	99.70	328	BAI36256.1	type III secretion system effector zinc metalloprotease NleC	NA	NA	CP006262.1	2264755	2265741
GCA_000520055.1	GCA_000520055.1_02359	stxB2	Shiga toxin Stx2a subunit B	plus	VIRULENCE	VIRULENCE	STX2	stxB2a	EXACTP	89	89	100.00	100.00	89	AAM90978.1	Shiga toxin Stx2a subunit B	NF033660.0	Shiga toxin Stx2 subunit B	CP006262.1	2294772	2295041
GCA_000520055.1	GCA_000520055.1_02360	stxA2	Shiga toxin Stx2 subunit A	plus	VIRULENCE	VIRULENCE	STX2	stxA2	EXACTP	319	319	100.00	100.00	319	GDR53740.1	Shiga toxin Stx2 subunit A	NF041702.1	Shiga toxin Stx2 subunit A	CP006262.1	2295053	2296012
GCA_000520055.1	GCA_000520055.1_02511	nleB2	type III secretion system effector arginine glycosyltransferase NleB2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	326	326	100.00	100.00	326	CAS08589.1	type III secretion system effector arginine glycosyltransferase NleB2	NA	NA	CP006262.1	2420021	2421001
GCA_000520055.1	GCA_000520055.1_02827	nleA	type III secretion system effector NleA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	411	413	100.00	95.16	413	CAM11324.1	type III secretion system effector NleA	NA	NA	CP006262.1	2711209	2712444
GCA_000520055.1	GCA_000520055.1_03274	sinH	intimin-like inverse autotransporter SinH	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	726	730	99.86	74.38	730	AAL21411.1	intimin-like inverse autotransporter SinH	NF033423.1	intimin-like inverse autotransporter SinH	CP006262.1	3162785	3164965
GCA_000520055.1	GCA_000520055.1_04111	acrF	multidrug efflux RND transporter permease subunit AcrF	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1034	1034	100.00	99.71	1034	AAC76298.1	multidrug efflux RND transporter permease subunit AcrF	NA	NA	CP006262.1	3988055	3991159
GCA_000520055.1	GCA_000520055.1_04368	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	91.49	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP006262.1	4222090	4222515
GCA_000520055.1	GCA_000520055.1_04430	lpfA1	long polar fimbria major subunit LpfA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	174	178	97.75	98.28	174	OPH66324.1	long polar fimbria major subunit LpfA1	NA	NA	CP006262.1	4293450	4293974
GCA_000520055.1	GCA_000520055.1_04556	espF	type III secretion system LEE effector EspF	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	201	254	80.71	93.66	205	ADD58872.1	type III secretion system LEE effector EspF	NF040807.1	type III secretion system LEE effector EspF	CP006262.1	4423454	4424059
GCA_000520055.1	GCA_000520055.1_04560	espB	type III secretion system LEE translocon pore-forming subunit EspB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	AAG58818.1	type III secretion system LEE translocon pore-forming subunit EspB	NA	NA	CP006262.1	4425099	4426037
GCA_000520055.1	GCA_000520055.1_04562	espA	type III secretion system LEE translocon filament protein EspA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	192	192	100.00	100.00	192	ACG59676.1	type III secretion system LEE translocon filament protein EspA	NA	NA	CP006262.1	4427195	4427773
GCA_000520055.1	GCA_000520055.1_04565	eae	intimin type gamma	plus	VIRULENCE	VIRULENCE	INTIMIN	GAMMA	EXACTP	934	934	100.00	100.00	934	ACM67148.1	intimin type gamma	NF033627.3	intimin	CP006262.1	4430514	4433318
GCA_000520055.1	GCA_000520055.1_04567	tir	type III secretion system LEE translocated intimin receptor Tir	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	560	560	100.00	99.82	560	ACG59737.1	type III secretion system LEE translocated intimin receptor Tir	NF033637.1	type III secretion system LEE translocated intimin receptor Tir	CP006262.1	4433983	4435665
GCA_000520055.1	GCA_000520055.1_04619	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.24	394	BAE77620.1	multidrug efflux MFS transporter EmrD	NA	NA	CP006262.1	4478455	4479639
GCA_000520055.1	GCA_000520055.1_04862	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	CP006262.1	4723456	4724358
GCA_000520055.1	GCA_000520055.1_05301	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	377	377	100.00	97.08	377	WP_063610930.1	extended-spectrum class C beta-lactamase EC-15	NF000185.2	BlaEC family class C beta-lactamase	CP006262.1	5172482	5173615
GCA_000520055.1	GCA_000520055.1_05332	nleB	type III secretion system effector arginine glycosyltransferase NleB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	329	329	100.00	100.00	329	AAL57565.1	type III secretion system effector arginine glycosyltransferase NleB	NA	NA	CP006262.1	5201652	5202641
GCA_000520055.1	GCA_000520055.1_05335	efa1	lymphostatin Efa1/LifA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	3223	3223	100.00	99.94	3223	BAI32294.1	lymphostatin Efa1/LifA	NA	NA	CP006262.1	5205238	5214909
GCA_000520055.1	GCA_000520055.1_05400	mdtM	multidrug efflux MFS transporter MdtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	98.04	409	AAC77293.1	multidrug efflux MFS transporter MdtM	NA	NA	CP006262.1	5272769	5274001
GCA_000520055.1	GCA_000520055.1_05550	etpD	variant type II secretion system secretin EtpD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	656	656	100.00	99.70	656	BAI33940.1	variant type II secretion system secretin EtpD	NA	NA	CP006263.1	3661	5631
GCA_000520055.1	GCA_000520055.1_05659	ehxA	enterohemolysin EhxA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	998	998	100.00	100.00	998	ADZ45128.1	enterohemolysin EhxA	NA	NA	CP006263.1	85344	88340
GCA_002633865.1	GCA_002633865.1_00082	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP017677.1	98030	99388
GCA_002633865.1	GCA_002633865.1_00277	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP017677.1	325425	326780
GCA_002633865.1	GCA_002633865.1_00314	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP017677.1	360088	360699
GCA_002633865.1	GCA_002633865.1_01674	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP017677.1	1778473	1779765
GCA_002633865.1	GCA_002633865.1_01714	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	CP017677.1	1811776	1812498
GCA_002633865.1	GCA_002633865.1_01715	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP017677.1	1812623	1813330
GCA_002633865.1	GCA_002633865.1_01720	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP017677.1	1817461	1818444
GCA_002633865.1	GCA_002633865.1_01721	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP017677.1	1818446	1819366
GCA_002633865.1	GCA_002633865.1_01729	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	99.60	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP017677.1	1825582	1826337
GCA_002633865.1	GCA_002633865.1_01730	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP017677.1	1826376	1826771
GCA_002633865.1	GCA_002633865.1_01732	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP017677.1	1827301	1828029
GCA_002633865.1	GCA_002633865.1_01733	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP017677.1	1828064	1828783
GCA_002633865.1	GCA_002633865.1_01734	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP017677.1	1829064	1829828
GCA_002633865.1	GCA_002633865.1_01891	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP017677.1	1954736	1955086
GCA_002633865.1	GCA_002633865.1_01895	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	CP017677.1	1956583	1957074
GCA_002633865.1	GCA_002633865.1_01972	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP017677.1	2010497	2010631
GCA_002633865.1	GCA_002633865.1_02115	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP017677.1	2160835	2162277
GCA_002633865.1	GCA_002633865.1_02286	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP017677.1	2312624	2313043
GCA_002633865.1	GCA_002633865.1_02370	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP017677.1	2401376	2402341
GCA_002633865.1	GCA_002633865.1_02371	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP017677.1	2402908	2403855
GCA_002633865.1	GCA_002633865.1_02372	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP017677.1	2403857	2404834
GCA_002633865.1	GCA_002633865.1_02449	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1371	1115	61.43	99.85	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP017677.1	2483201	2487316
GCA_002633865.1	GCA_002633865.1_02595	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP017677.1	2643208	2644737
GCA_002633865.1	GCA_002633865.1_02629	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP017677.1	2687923	2688975
GCA_002633865.1	GCA_002633865.1_02675	sej	staphylococcal enterotoxin type J	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	268	268	100.00	100.00	268	AAC78590.1	staphylococcal enterotoxin type J	NA	NA	CP017678.1	472	1278
GCA_002633865.1	GCA_002633865.1_02678	sed	staphylococcal enterotoxin type D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	258	258	100.00	99.61	258	AAB06195.1	staphylococcal enterotoxin type D	NA	NA	CP017678.1	2174	2950
GCA_002633865.1	GCA_002633865.1_02684	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP017678.1	8605	9222
GCA_002633865.1	GCA_002633865.1_02696	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP017678.1	19796	20641
GCA_002633865.1	GCA_002633865.1_02697	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP017678.1	20748	22505
GCA_002633865.1	GCA_002633865.1_02698	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP017678.1	22495	22875
GCA_003943455.1	GCA_003943455.1_01394	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJPL01000007.1	78383	79846
GCA_003943455.1	GCA_003943455.1_01395	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJPL01000007.1	79966	81183
GCA_028464135.1	GCA_028464135.1_00970	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQPCE010000017.1	3313	3660
GCA_028464135.1	GCA_028464135.1_00974	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAQPCE010000017.1	7343	8635
GCA_028464135.1	GCA_028464135.1_01422	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAQPCE010000020.1	18511	19977
GCA_028464135.1	GCA_028464135.1_01425	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAQPCE010000020.1	21782	22162
GCA_028464135.1	GCA_028464135.1_01426	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAQPCE010000020.1	22152	23909
GCA_028464135.1	GCA_028464135.1_01427	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAQPCE010000020.1	24016	24861
GCA_028464135.1	GCA_028464135.1_02302	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAQPCE010000007.1	90335	91627
GCA_030176835.1	GCA_030176835.1_00299	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVE010000013.1	43239	44093
GCA_030176835.1	GCA_030176835.1_01084	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.78	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASNVE010000002.1	71268	72710
GCA_030844905.1	GCA_030844905.1_00045	tet(65)	tetracycline efflux MFS transporter Tet(65)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	384	383	100.00	98.43	383	WP_152609570.1	tetracycline efflux MFS transporter Tet(65)	NF045684.1	tetracycline efflux MFS transporter Tet(65)	JASNML010000001.1	44795	45949
GCA_030844905.1	GCA_030844905.1_02614	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASNML010000003.1	1388474	1390255
GCA_030844905.1	GCA_030844905.1_02618	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASNML010000003.1	1393912	1395831
GCA_003546465.1	GCA_003546465.1_02009	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	397	396	98.48	87.95	390	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP007746.1	2109557	2110750
GCA_003546465.1	GCA_003546465.1_02373	norM	multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	462	462	99.78	92.19	461	AAG27731.1	multidrug efflux MATE transporter NorM	NA	NA	CP007746.1	2493401	2494789
GCA_003546465.1	GCA_003546465.1_03718	blaPEN-bcc	PEN family class A beta-lactamase, Bcc-type	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	312	312	100.00	100.00	312	WP_027789588.1	PEN family class A beta-lactamase, Bcc-type	NF000320.3	PEN family class A beta-lactamase, Bcc-type	CP007748.1	111555	112493
GCA_003546465.1	GCA_003546465.1_04106	blaOXA	OXA-1043 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	100.00	84.76	269	WP_077021671.1	OXA-1043 family class D beta-lactamase	NF040600.1	OXA-1043 family class D beta-lactamase	CP007748.1	543958	544767
GCA_003546465.1	GCA_003546465.1_04948	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	84.62	52.07	121	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP007748.1	1486710	1487105
GCA_003546465.1	GCA_003546465.1_05215	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	410	395	99.24	63.01	392	WP_031633255.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP007748.1	1788002	1789234
GCA_003546465.1	GCA_003546465.1_05548	ant(3)	ANT(3)-I family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	HMM	270	262	99.62	63.98	261	WP_071846244.1	ANT(3)-I family aminoglycoside nucleotidyltransferase	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP007748.1	2152100	2152912
GCA_003546465.1	GCA_003546465.1_06391	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	99.67	55.15	301	WP_105807557.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP007748.1	3111251	3112150
GCA_003546465.1	GCA_003546465.1_07146	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	389	408	92.16	56.76	377	WP_322881141.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP007747.1	573057	574226
GCA_001837365.1	GCA_001837365.1_01407	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV832164.1	32868	34787
GCA_001837365.1	GCA_001837365.1_01677	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV832164.1	311488	313128
GCA_002197815.1	GCA_002197815.1_01512	tbtM	multidrug efflux RND transporter outer membrane channel subunit TbtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	476	476	100.00	98.95	476	AAD15665.1	multidrug efflux RND transporter outer membrane channel subunit TbtM	NA	NA	NIUB01000009.1	4319	5749
GCA_002197815.1	GCA_002197815.1_01513	tbtB	multidrug efflux RND transporter permease subunit TbtB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1046	1046	100.00	94.46	1046	AAD15664.1	multidrug efflux RND transporter permease subunit TbtB	NA	NA	NIUB01000009.1	5746	8886
GCA_002197815.1	GCA_002197815.1_03710	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	49.45	91	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	NIUB01000033.1	24588	24863
GCA_022569135.1	GCA_022569135.1_01343	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKO010000004.1	242009	242428
GCA_022569135.1	GCA_022569135.1_01401	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKO010000005.1	3699	4988
GCA_022569135.1	GCA_022569135.1_01402	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKRKO010000005.1	5006	5407
GCA_022569135.1	GCA_022569135.1_01437	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKO010000005.1	40386	41459
GCA_022569135.1	GCA_022569135.1_01872	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKO010000007.1	152756	154048
GCA_000148585.3	GCA_000148585.3_00858	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP028414.1	813199	814398
GCA_000148585.3	GCA_000148585.3_01584	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP028414.1	1593785	1595443
GCA_001076955.1	GCA_001076955.1_00264	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JVCY01000018.1	4416	4844
GCA_001076955.1	GCA_001076955.1_00543	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JVCY01000027.1	16234	17451
GCA_001076955.1	GCA_001076955.1_00544	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JVCY01000027.1	17571	19034
GCA_001076955.1	GCA_001076955.1_00835	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.75	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JVCY01000041.1	2276	4195
GCA_001076955.1	GCA_001076955.1_00846	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JVCY01000041.1	14113	14850
GCA_001076955.1	GCA_001076955.1_02239	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVCY01000080.1	60010	61734
GCA_001076955.1	GCA_001076955.1_02240	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.97	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVCY01000080.1	61736	63472
GCA_000626595.1	GCA_000626595.1_00045	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_002244796.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CP007524.1	42048	43253
GCA_000626595.1	GCA_000626595.1_01011	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP007524.1	990965	992344
GCA_000626595.1	GCA_000626595.1_01741	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP007524.1	1738006	1738911
GCA_000626595.1	GCA_000626595.1_01919	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.82	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP007524.1	1910533	1911771
GCA_000626595.1	GCA_000626595.1_01920	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.14	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP007524.1	1912175	1912807
GCA_000626595.1	GCA_000626595.1_01922	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.36	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP007524.1	1913629	1915197
GCA_000626595.1	GCA_000626595.1_02117	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.21	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP007524.1	2115786	2117312
GCA_015326295.1	GCA_015326295.1_02338	bepE	multidrug efflux RND transporter permease subunit BepE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1049	1051	99.71	94.37	1048	AAN29241.1	multidrug efflux RND transporter permease subunit BepE	NA	NA	CP064063.1	358278	361427
GCA_015326295.1	GCA_015326295.1_02754	blaOCH	OCH family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	390	390	100.00	99.74	390	WP_029376317.1	OCH family extended-spectrum class C beta-lactamase	NF000264.2	OCH family extended-spectrum class C beta-lactamase	CP064063.1	791730	792902
GCA_015326295.1	GCA_015326295.1_03116	tet(G)	tetracycline efflux MFS transporter Tet(G)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	391	391	100.00	96.42	391	WP_063856077.1	tetracycline efflux MFS transporter Tet(G)	NF012192.0	tetracycline efflux MFS transporter Tet(G)	CP064063.1	1148451	1149626
GCA_015326295.1	GCA_015326295.1_03118	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	404	404	100.00	100.00	404	WP_001747811.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP064063.1	1150564	1151778
GCA_015326295.1	GCA_015326295.1_03128	aph(3)-I(H957)	aminoglycoside O-phosphotransferase APH(3)-I(H957)	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	270	270	100.00	99.26	270	WP_216562158.1	aminoglycoside O-phosphotransferase APH(3)-I(H957)	NF033059.2	APH(3)-I family aminoglycoside O-phosphotransferase	CP064063.1	1158986	1159798
GCA_015326295.1	GCA_015326295.1_03979	cml	Cml family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	397	397	100.00	92.95	397	WP_061345584.1	Cml family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP064063.1	2030511	2031704
GCA_015326295.1	GCA_015326295.1_03995	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	266	266	100.00	72.93	266	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP064063.1	2047317	2048117
GCA_009378105.1	GCA_009378105.1_00699	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCJA01000002.1	132531	133472
GCA_018127905.1	GCA_018127905.1_00472	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072345.1	585758	586948
GCA_018127905.1	GCA_018127905.1_02259	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP072346.1	903234	904199
GCA_003492195.1	GCA_003492195.1_00678	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQMS01000003.1	75162	76067
GCA_003492195.1	GCA_003492195.1_01520	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.90	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQMS01000008.1	79121	80359
GCA_003492195.1	GCA_003492195.1_01521	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQMS01000008.1	80376	81239
GCA_003492195.1	GCA_003492195.1_01523	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.36	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQMS01000008.1	82031	83599
GCA_003492195.1	GCA_003492195.1_01734	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.24	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQMS01000011.1	14678	16204
GCA_022069545.1	GCA_022069545.1_00969	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035248.1	902528	903727
GCA_013009875.1	GCA_013009875.1_00648	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP046425.1	727624	729549
GCA_013009875.1	GCA_013009875.1_02289	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	90.67	52.94	272	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP046425.1	2691392	2692351
GCA_013009875.1	GCA_013009875.1_04225	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	PARTIALP	191	266	69.55	99.46	185	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NA	NA	CP046425.1	5009345	5009920
GCA_013009875.1	GCA_013009875.1_04227	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.55	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP046425.1	5011467	5013392
GCA_023109675.1	GCA_023109675.1_00480	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.74	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JALDUR010000018.1	8257	9981
GCA_023109675.1	GCA_023109675.1_00481	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.36	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JALDUR010000018.1	9983	11719
GCA_023109675.1	GCA_023109675.1_00746	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JALDUR010000001.1	226209	227687
GCA_023109675.1	GCA_023109675.1_01135	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDUR010000002.1	158432	159649
GCA_023109675.1	GCA_023109675.1_01136	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDUR010000002.1	159769	161232
GCA_023109675.1	GCA_023109675.1_01141	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JALDUR010000002.1	162973	163401
GCA_023109675.1	GCA_023109675.1_01565	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JALDUR010000004.1	14989	16908
GCA_919949215.1	GCA_919949215.1_01700	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	OV040719.1	1668597	1669991
GCA_001679325.1	GCA_001679325.1_01232	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LZMX01000027.1	184383	184805
GCA_000173895.1	GCA_000173895.1_00289	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.42	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	ACDY02000012.1	8453	9691
GCA_000173895.1	GCA_000173895.1_00466	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	ACDY02000010.1	70250	71629
GCA_000173895.1	GCA_000173895.1_01046	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	311	508	61.22	97.75	311	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	ACDY02000005.1	158879	159814
GCA_001813965.1	GCA_001813965.1_00097	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	639	92.80	98.82	593	WP_050618045.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV814479.1	22405	24192
GCA_020729715.1	GCA_020729715.1_01494	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	JAJEOY010000040.1	348593	349633
GCA_946902955.1	GCA_946902955.1_00570	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAMPQC010000003.1	124877	125731
GCA_003355395.1	GCA_003355395.1_00001	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP031329.1	279	1847
GCA_003355395.1	GCA_003355395.1_00003	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP031329.1	2485	3117
GCA_003355395.1	GCA_003355395.1_00004	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.82	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP031329.1	3522	4760
GCA_003355395.1	GCA_003355395.1_00889	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP031329.1	908306	909685
GCA_003355395.1	GCA_003355395.1_01406	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.02	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP031329.1	1434432	1435958
GCA_002763915.1	GCA_002763915.1_00925	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP024731.1	876276	878195
GCA_029691895.1	GCA_029691895.1_01331	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121502.1	1344404	1344784
GCA_029691895.1	GCA_029691895.1_01332	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121502.1	1344774	1346531
GCA_029691895.1	GCA_029691895.1_01333	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121502.1	1346638	1347483
GCA_029691895.1	GCA_029691895.1_01968	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP121502.1	1963987	1965453
GCA_029691895.1	GCA_029691895.1_01969	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP121502.1	1965552	1966451
GCA_029691895.1	GCA_029691895.1_02026	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP121502.1	2038021	2039088
GCA_029691895.1	GCA_029691895.1_02077	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP121502.1	2096682	2097110
GCA_029691895.1	GCA_029691895.1_02410	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP121503.1	7638	9017
GCA_029691895.1	GCA_029691895.1_02429	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP121503.1	25308	26687
GCA_029691895.1	GCA_029691895.1_02448	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP121503.1	42978	44357
GCA_014266725.1	GCA_014266725.1_00094	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JACMVO010000002.1	57383	57805
GCA_014266725.1	GCA_014266725.1_00144	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	344	350	96.29	76.26	337	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACMVO010000002.1	117004	118038
GCA_014266725.1	GCA_014266725.1_01160	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVO010000005.1	60411	61700
GCA_014266725.1	GCA_014266725.1_01428	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACMVO010000008.1	5608	6003
GCA_014266725.1	GCA_014266725.1_01429	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVO010000008.1	6020	7312
GCA_014266725.1	GCA_014266725.1_01433	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMVO010000008.1	10989	11336
GCA_009378895.1	GCA_009378895.1_01253	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCV01000007.1	111806	112747
GCA_000012185.1	GCA_000012185.1_00135	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP000057.2	128729	129589
GCA_000012185.1	GCA_000012185.1_01375	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP000057.2	1354582	1355976
GCA_030826365.1	GCA_030826365.1_01681	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	148	120	100.00	48.39	124	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAPJOE010000021.1	38905	39351
GCA_001553955.1	GCA_001553955.1_01610	icr-Mo	phosphoethanolamine--lipid A transferase ICR-Mo	plus	AMR	AMR	COLISTIN	COLISTIN	BLASTP	548	558	98.21	100.00	548	WP_082741435.1	phosphoethanolamine--lipid A transferase ICR-Mo	NA	NA	CP014234.1	1701660	1703306
GCA_014109765.1	GCA_014109765.1_02492	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	378	379	99.74	85.71	378	WP_230924646.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP059139.1	2652670	2653806
GCA_014109765.1	GCA_014109765.1_02610	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	412	414	100.00	74.88	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP059139.1	2776315	2777553
GCA_015679885.1	GCA_015679885.1_00458	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030824.1	457734	459113
GCA_015679885.1	GCA_015679885.1_01207	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP030824.1	1213740	1214645
GCA_015679885.1	GCA_015679885.1_01340	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030824.1	1349849	1351087
GCA_015679885.1	GCA_015679885.1_01342	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	215	210	74.29	98.72	156	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030824.1	1352578	1353225
GCA_015679885.1	GCA_015679885.1_01344	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030824.1	1354036	1355604
GCA_015679885.1	GCA_015679885.1_01540	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030824.1	1557711	1559237
GCA_001528845.1	GCA_001528845.1_00110	ant(3)	ANT(3)-I family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	HMM	270	262	99.62	63.98	261	WP_071846244.1	ANT(3)-I family aminoglycoside nucleotidyltransferase	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	BCNU01000001.1	126955	127767
GCA_001528845.1	GCA_001528845.1_01817	norM	multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	462	462	99.78	92.19	461	AAG27731.1	multidrug efflux MATE transporter NorM	NA	NA	BCNU01000010.1	52674	54062
GCA_001528845.1	GCA_001528845.1_01982	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	389	408	92.16	56.76	377	WP_322881141.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	BCNU01000011.1	158330	159499
GCA_001528845.1	GCA_001528845.1_03149	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	99.67	55.15	301	WP_105807557.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	BCNU01000018.1	72958	73857
GCA_001528845.1	GCA_001528845.1_03617	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	410	395	99.24	63.01	392	WP_031633255.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	BCNU01000021.1	10488	11720
GCA_001528845.1	GCA_001528845.1_03939	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	397	396	98.48	87.95	390	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	BCNU01000024.1	79407	80600
GCA_001528845.1	GCA_001528845.1_05230	blaOXA	OXA-1043 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	100.00	84.76	269	WP_077021671.1	OXA-1043 family class D beta-lactamase	NF040600.1	OXA-1043 family class D beta-lactamase	BCNU01000033.1	34612	35421
GCA_001528845.1	GCA_001528845.1_06977	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	84.62	52.07	121	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	BCNU01000052.1	30051	30446
GCA_001528845.1	GCA_001528845.1_07536	blaPEN-bcc	PEN family class A beta-lactamase, Bcc-type	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	312	312	100.00	100.00	312	WP_027789588.1	PEN family class A beta-lactamase, Bcc-type	NF000320.3	PEN family class A beta-lactamase, Bcc-type	BCNU01000065.1	27692	28630
GCA_028326525.1	GCA_028326525.1_00087	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMNA010000012.1	4698	6617
GCA_028326525.1	GCA_028326525.1_01832	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMNA010000008.1	70517	71248
GCA_027687595.1	GCA_027687595.1_00340	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQCQM010000001.1	336453	336881
GCA_027687595.1	GCA_027687595.1_00546	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	92.39	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQCQM010000001.1	566242	567978
GCA_027687595.1	GCA_027687595.1_00547	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	618	574	100.00	91.64	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQCQM010000001.1	567980	569836
GCA_916438675.1	GCA_916438675.1_01667	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAKAFN010000001.1	1740445	1741635
GCA_916438675.1	GCA_916438675.1_02693	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAKAFN010000002.1	767802	768767
GCA_003493365.1	GCA_003493365.1_00499	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	94.83	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQKM01000002.1	70634	72028
GCA_001657905.1	GCA_001657905.1_01622	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	LXZW01000050.1	43858	45777
GCA_009183435.1	GCA_009183435.1_00788	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	WEHV01000010.1	133	978
GCA_009183435.1	GCA_009183435.1_00789	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	WEHV01000010.1	1085	2842
GCA_009183435.1	GCA_009183435.1_00790	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	WEHV01000010.1	2832	3212
GCA_009183435.1	GCA_009183435.1_00812	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	WEHV01000010.1	24193	25833
GCA_009183435.1	GCA_009183435.1_01489	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	WEHV01000003.1	126699	127991
GCA_002753835.1	GCA_002753835.1_02006	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	PEKN01000002.1	207110	209035
GCA_002753835.1	GCA_002753835.1_02011	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	PEKN01000002.1	213181	214146
GCA_015377505.1	GCA_015377505.1_00966	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP045589.1	1100879	1102798
GCA_003492555.1	GCA_003492555.1_01193	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQMA01000004.1	181028	182596
GCA_003492555.1	GCA_003492555.1_01195	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQMA01000004.1	183388	184020
GCA_003492555.1	GCA_003492555.1_01196	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQMA01000004.1	184267	185505
GCA_003492555.1	GCA_003492555.1_01258	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQMA01000005.1	62502	63407
GCA_003492555.1	GCA_003492555.1_01922	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQMA01000009.1	49875	51401
GCA_023509275.1	GCA_023509275.1_00045	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP091863.1	48895	49749
GCA_024295605.1	GCA_024295605.1_00272	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	89.44	61.42	127	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPB010000001.1	255060	255488
GCA_024295605.1	GCA_024295605.1_00277	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPB010000001.1	258459	259676
GCA_024295605.1	GCA_024295605.1_00278	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPB010000001.1	259796	261259
GCA_024295605.1	GCA_024295605.1_00283	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPB010000001.1	263209	263637
GCA_024295605.1	GCA_024295605.1_00992	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JANCPB010000003.1	23487	25406
GCA_001838535.1	GCA_001838535.1_00120	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	457	458	98.47	98.45	451	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	KV837427.1	101099	102472
GCA_001838535.1	GCA_001838535.1_00121	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV837427.1	102570	104489
GCA_001838535.1	GCA_001838535.1_00743	dfrF	trimethoprim-resistant dihydrofolate reductase DfrF	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	164	164	100.00	100.00	164	WP_002322211.1	trimethoprim-resistant dihydrofolate reductase DfrF	NF000333.1	trimethoprim-resistant dihydrofolate reductase DfrF	KV837440.1	11287	11781
GCA_001838535.1	GCA_001838535.1_00876	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV837440.1	128366	130006
GCA_001838535.1	GCA_001838535.1_01743	erm(T)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_002345002.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV837489.1	99	833
GCA_021893145.1	GCA_021893145.1_00603	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.74	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JAJUWQ010000001.1	378416	379615
GCA_001546565.2	GCA_001546565.2_01842	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	KQ971207.1	2275	3075
GCA_013277355.1	GCA_013277355.1_01913	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMMT01000007.1	20088	22007
GCA_001339755.1	GCA_001339755.1_00556	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856399.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CFGT01000003.1	67843	69762
GCA_001339755.1	GCA_001339755.1_00557	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CFGT01000003.1	70869	71606
GCA_001339755.1	GCA_001339755.1_01762	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CFGT01000023.1	28345	29478
GCA_000614105.1	GCA_000614105.1_00770	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	BAKH01000032.1	6864	8054
GCA_003490935.1	GCA_003490935.1_01045	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.26	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQGD01000003.1	224451	225845
GCA_002761935.1	GCA_002761935.1_00204	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.90	639	WP_063856403.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	PEQX01000001.1	198313	200232
GCA_002761935.1	GCA_002761935.1_00573	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	97.56	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	PEQX01000001.1	585021	585515
GCA_004354485.1	GCA_004354485.1_00622	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	131	121	100.00	50.37	135	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	PUFC01000008.1	255549	255944
GCA_009495895.1	GCA_009495895.1_01618	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIIX01000006.1	109469	110668
GCA_916709935.1	GCA_916709935.1_01688	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAKAOT010000047.1	7375	9015
GCA_916709935.1	GCA_916709935.1_01738	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	640	92.97	98.99	595	WP_063856422.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CAKAOT010000052.1	6034	7821
GCA_916709935.1	GCA_916709935.1_01741	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAKAOT010000052.1	9975	10829
GCA_937990705.1	GCA_937990705.1_02161	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CALKRA010000109.1	78545	79741
GCA_001886235.1	GCA_001886235.1_00689	vanS	vancomycin resistance histidine kinase VanS	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	374	376	96.81	56.99	365	WP_034869172.1	vancomycin resistance histidine kinase VanS	NF033091.0	vancomycin resistance histidine kinase VanS	JXLD01000014.1	56270	57394
GCA_001886235.1	GCA_001886235.1_01522	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	138	143	93.01	54.89	133	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	JXLD01000003.1	18910	19326
GCA_001886235.1	GCA_001886235.1_01900	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	219	99.09	52.07	217	WP_063843219.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JXLD01000005.1	16260	16907
GCA_001886235.1	GCA_001886235.1_02582	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	496	500	99.40	66.53	502	WP_002296175.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JXLD01000009.1	86031	87521
GCA_019329405.1	GCA_019329405.1_00091	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073830.1	90869	92875
GCA_019329405.1	GCA_019329405.1_00092	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073830.1	92975	94732
GCA_019329405.1	GCA_019329405.1_00093	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073830.1	94732	95103
GCA_019329405.1	GCA_019329405.1_00139	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073830.1	134069	134407
GCA_019329405.1	GCA_019329405.1_00140	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073830.1	134465	136108
GCA_019329405.1	GCA_019329405.1_00141	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073830.1	136190	136840
GCA_019329405.1	GCA_019329405.1_00151	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073830.1	145626	146924
GCA_019329405.1	GCA_019329405.1_00154	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073830.1	149093	149440
GCA_019329405.1	GCA_019329405.1_00231	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073830.1	232078	232314
GCA_019329405.1	GCA_019329405.1_00282	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073830.1	290112	291179
GCA_019329405.1	GCA_019329405.1_01776	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073830.1	1807536	1807916
GCA_019329405.1	GCA_019329405.1_01777	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073830.1	1807906	1809663
GCA_019329405.1	GCA_019329405.1_01778	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073830.1	1809770	1810615
GCA_019329405.1	GCA_019329405.1_01799	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073830.1	1829435	1830076
GCA_019329405.1	GCA_019329405.1_01920	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073830.1	1905704	1907143
GCA_019329405.1	GCA_019329405.1_01923	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073830.1	1908899	1909384
GCA_019329405.1	GCA_019329405.1_02748	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073831.1	563	2107
GCA_000420605.1	GCA_000420605.1_02023	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	ATVG01000025.1	216	1070
GCA_000180035.1	GCA_000180035.1_00300	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	AEKM01000016.1	305220	306944
GCA_000180035.1	GCA_000180035.1_00301	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	AEKM01000016.1	306946	308682
GCA_000180035.1	GCA_000180035.1_00865	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AEKM01000010.1	93249	93677
GCA_902850315.1	GCA_902850315.1_01084	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	LR793256.1	1123253	1124470
GCA_902850315.1	GCA_902850315.1_01085	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	LR793256.1	1124590	1126053
GCA_029928775.1	GCA_029928775.1_01557	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREFH010000002.1	574843	575916
GCA_029928775.1	GCA_029928775.1_01607	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAREFH010000002.1	635116	635538
GCA_029928775.1	GCA_029928775.1_02085	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFH010000004.1	60446	61735
GCA_029928775.1	GCA_029928775.1_02361	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREFH010000007.1	5654	6049
GCA_029928775.1	GCA_029928775.1_02362	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFH010000007.1	6066	7358
GCA_029928775.1	GCA_029928775.1_02366	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREFH010000007.1	11041	11388
GCA_029928775.1	GCA_029928775.1_02431	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREFH010000008.1	23852	24697
GCA_029928775.1	GCA_029928775.1_02432	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREFH010000008.1	24804	26561
GCA_029928775.1	GCA_029928775.1_02433	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREFH010000008.1	26551	26931
GCA_902825205.1	GCA_902825205.1_00064	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	LR782232.1	67173	68075
GCA_902825205.1	GCA_902825205.1_00270	lpfA-O113	long polar fimbria major subunit LpfA-O113	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	190	190	100.00	100.00	190	AAT76975.1	long polar fimbria major subunit LpfA-O113	NA	NA	LR782232.1	267630	268202
GCA_902825205.1	GCA_902825205.1_00332	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	267	394	65.74	100.00	259	BAE77620.1	multidrug efflux MFS transporter EmrD	NA	NA	LR782232.1	328967	329770
GCA_902825205.1	GCA_902825205.1_00529	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	93.62	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	LR782232.1	537206	537631
GCA_902825205.1	GCA_902825205.1_00531	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	BAE77793.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	LR782232.1	538987	539340
GCA_902825205.1	GCA_902825205.1_00755	acrF	multidrug efflux RND transporter permease subunit AcrF	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1034	1034	100.00	99.52	1034	AAC76298.1	multidrug efflux RND transporter permease subunit AcrF	NA	NA	LR782232.1	748683	751787
GCA_902825205.1	GCA_902825205.1_01058	sslE	lipoprotein metalloprotease SslE	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	1521	1520	100.00	87.78	1522	ADE89421.1	lipoprotein metalloprotease SslE	NF037973.1	lipoprotein metalloprotease SslE	LR782232.1	1053202	1057767
GCA_902825205.1	GCA_902825205.1_01596	aac(2)-IIa	kasugamycin N-acetyltransferase AAC(2)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	BLASTP	260	260	100.00	98.85	260	WP_063839881.1	kasugamycin N-acetyltransferase AAC(2)-IIa	NF000100.2	kasugamycin N-acetyltransferase AAC(2)-IIa	LR782232.1	1594548	1595330
GCA_902825205.1	GCA_902825205.1_02185	emrE	multidrug efflux SMR transporter EmrE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	110	110	100.00	98.18	110	CAA77936.1	multidrug efflux SMR transporter EmrE	NF042984.1	multidrug efflux SMR transporter EmrE	LR782232.1	2202128	2202460
GCA_902825205.1	GCA_902825205.1_02547	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	BLASTP	102	102	100.00	97.06	102	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	LR782232.1	2550012	2550320
GCA_902825205.1	GCA_902825205.1_03005	ariR	biofilm/acid-resistance regulator AriR	plus	STRESS	ACID	NA	NA	EXACTP	88	88	100.00	100.00	88	AAC74250.1	biofilm/acid-resistance regulator AriR	NA	NA	LR782232.1	3017276	3017542
GCA_902825205.1	GCA_902825205.1_03848	fdeC	inverse autotransporter adhesin FdeC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1417	1416	99.93	92.51	1415	ABE05822.1	inverse autotransporter adhesin FdeC	NA	NA	LR782232.1	3890306	3894559
GCA_902825205.1	GCA_902825205.1_04202	espX1	type III secretion system effector EspX1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	473	473	100.00	91.33	473	ADD54679.1	type III secretion system effector EspX1	NA	NA	LR782232.1	4251902	4253323
GCA_902825205.1	GCA_902825205.1_04296	mdtM	multidrug efflux MFS transporter MdtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	100.00	97.80	410	AAC77293.1	multidrug efflux MFS transporter MdtM	NA	NA	LR782232.1	4344297	4345529
GCA_902825205.1	GCA_902825205.1_04466	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	377	377	100.00	99.73	377	WP_063860256.1	extended-spectrum class C beta-lactamase EC-18	NF000185.2	BlaEC family class C beta-lactamase	LR782232.1	4509180	4510313
GCA_943912975.1	GCA_943912975.1_00206	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	110	123	82.11	49.50	101	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CALTVA010000003.1	64870	65202
GCA_021398325.1	GCA_021398325.1_00029	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	94.75	514	WP_063854503.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP071992.1	33105	34649
GCA_021398325.1	GCA_021398325.1_00081	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP071992.1	82992	84281
GCA_021398325.1	GCA_021398325.1_00084	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP071992.1	86459	86806
GCA_021398325.1	GCA_021398325.1_00156	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	94.37	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP071992.1	177506	177934
GCA_021398325.1	GCA_021398325.1_02313	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP071992.1	2338077	2339369
GCA_021398325.1	GCA_021398325.1_02551	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP071993.1	14268	15113
GCA_021398325.1	GCA_021398325.1_02552	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP071993.1	15220	16977
GCA_021398325.1	GCA_021398325.1_02553	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP071993.1	16967	17347
GCA_021398325.1	GCA_021398325.1_02556	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP071993.1	19152	20618
GCA_001071035.1	GCA_001071035.1_00239	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JVIX01000048.1	1879	3342
GCA_001071035.1	GCA_001071035.1_00240	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JVIX01000048.1	3462	4679
GCA_001071035.1	GCA_001071035.1_01543	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVIX01000152.1	8859	10595
GCA_001071035.1	GCA_001071035.1_01544	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.74	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVIX01000152.1	10597	12321
GCA_001071035.1	GCA_001071035.1_01788	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JVIX01000165.1	11175	13094
GCA_001071035.1	GCA_001071035.1_02090	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVIX01000021.1	5877	7535
GCA_022832835.1	GCA_022832835.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP094853.1	39300	41306
GCA_022832835.1	GCA_022832835.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP094853.1	41406	43163
GCA_022832835.1	GCA_022832835.1_00036	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	67	123	54.47	100.00	67	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NA	NA	CP094853.1	43163	43366
GCA_022832835.1	GCA_022832835.1_00115	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100289.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP094853.1	127248	128606
GCA_022832835.1	GCA_022832835.1_00312	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP094853.1	353582	354937
GCA_022832835.1	GCA_022832835.1_00442	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP094853.1	448346	448957
GCA_022832835.1	GCA_022832835.1_00469	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP094853.1	471560	473479
GCA_022832835.1	GCA_022832835.1_01636	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP094853.1	1676754	1677506
GCA_022832835.1	GCA_022832835.1_01689	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	191	243	78.60	100.00	191	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP094853.1	1729667	1730242
GCA_022832835.1	GCA_022832835.1_01690	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP094853.1	1730524	1731306
GCA_022832835.1	GCA_022832835.1_01818	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094853.1	1877239	1878531
GCA_022832835.1	GCA_022832835.1_01864	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP094853.1	1916519	1917241
GCA_022832835.1	GCA_022832835.1_01865	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP094853.1	1917366	1918073
GCA_022832835.1	GCA_022832835.1_01876	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP094853.1	1929455	1930390
GCA_022832835.1	GCA_022832835.1_02038	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP094853.1	2061602	2061952
GCA_022832835.1	GCA_022832835.1_02042	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP094853.1	2063450	2063941
GCA_022832835.1	GCA_022832835.1_02046	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP094853.1	2065650	2066423
GCA_022832835.1	GCA_022832835.1_02134	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.59	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP094853.1	2130226	2130954
GCA_022832835.1	GCA_022832835.1_02135	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.17	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP094853.1	2130978	2131706
GCA_022832835.1	GCA_022832835.1_02205	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP094853.1	2183128	2183262
GCA_022832835.1	GCA_022832835.1_02354	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.79	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP094853.1	2335711	2337153
GCA_022832835.1	GCA_022832835.1_02534	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP094853.1	2492840	2493259
GCA_022832835.1	GCA_022832835.1_02621	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP094853.1	2582502	2583467
GCA_022832835.1	GCA_022832835.1_02622	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP094853.1	2584035	2584982
GCA_022832835.1	GCA_022832835.1_02623	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP094853.1	2584984	2585961
GCA_022832835.1	GCA_022832835.1_02794	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP094853.1	2763367	2763747
GCA_022832835.1	GCA_022832835.1_02795	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP094853.1	2763737	2765494
GCA_022832835.1	GCA_022832835.1_02796	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP094853.1	2765601	2766446
GCA_022832835.1	GCA_022832835.1_02858	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	144	243	57.61	100.00	140	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	NA	CP094853.1	2829268	2829702
GCA_022832835.1	GCA_022832835.1_02861	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP094853.1	2831410	2832849
GCA_022832835.1	GCA_022832835.1_02864	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP094853.1	2834699	2835481
GCA_022832835.1	GCA_022832835.1_02900	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP094853.1	2869384	2870913
GCA_022832835.1	GCA_022832835.1_02937	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	294	350	81.71	98.60	286	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP094853.1	2913243	2914127
GCA_022832835.1	GCA_022832835.1_02990	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP094854.1	1445	2179
GCA_015273915.1	GCA_015273915.1_01708	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACGQF010000006.1	19549	20622
GCA_015273915.1	GCA_015273915.1_01819	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGQF010000006.1	162161	163450
GCA_015273915.1	GCA_015273915.1_01820	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACGQF010000006.1	163468	163869
GCA_015273915.1	GCA_015273915.1_02068	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGQF010000008.1	60499	61788
GCA_015273915.1	GCA_015273915.1_02070	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGQF010000008.1	62095	62475
GCA_015273915.1	GCA_015273915.1_02071	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGQF010000008.1	62465	64222
GCA_015273915.1	GCA_015273915.1_02072	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGQF010000008.1	64329	65174
GCA_022690275.1	GCA_022690275.1_00854	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALCVQ010000002.1	85131	86771
GCA_022690275.1	GCA_022690275.1_00922	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVQ010000002.1	161589	162881
GCA_022690275.1	GCA_022690275.1_00926	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVQ010000002.1	166564	166911
GCA_022690275.1	GCA_022690275.1_00973	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.64	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVQ010000002.1	216361	217653
GCA_022690275.1	GCA_022690275.1_01019	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCVQ010000002.1	261334	261900
GCA_022690275.1	GCA_022690275.1_01020	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCVQ010000002.1	262078	263622
GCA_011714955.1	GCA_011714955.1_00624	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RXXW01000001.1	108690	109907
GCA_011714955.1	GCA_011714955.1_00625	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RXXW01000001.1	109928	111391
GCA_011714955.1	GCA_011714955.1_00661	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RXXW01000001.1	142350	144269
GCA_011714955.1	GCA_011714955.1_01293	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXW01000037.1	10933	12354
GCA_029927345.1	GCA_029927345.1_00020	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREDF010000010.1	16576	16956
GCA_029927345.1	GCA_029927345.1_00021	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREDF010000010.1	16946	18703
GCA_029927345.1	GCA_029927345.1_00022	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREDF010000010.1	18810	19655
GCA_029927345.1	GCA_029927345.1_01577	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREDF010000002.1	574843	575916
GCA_029927345.1	GCA_029927345.1_01627	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAREDF010000002.1	635116	635538
GCA_029927345.1	GCA_029927345.1_02105	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDF010000004.1	60446	61735
GCA_029927345.1	GCA_029927345.1_02414	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREDF010000007.1	33728	34075
GCA_029927345.1	GCA_029927345.1_02418	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDF010000007.1	37758	39050
GCA_029927345.1	GCA_029927345.1_02419	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREDF010000007.1	39067	39462
GCA_003589745.1	GCA_003589745.1_01150	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	78.66	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP032364.1	1255561	1257039
GCA_027698225.1	GCA_027698225.1_01307	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQERC010000004.1	22966	24885
GCA_015274105.1	GCA_015274105.1_00596	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPW010000001.1	630326	631618
GCA_015274105.1	GCA_015274105.1_02439	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGPW010000011.1	9807	10652
GCA_015274105.1	GCA_015274105.1_02440	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGPW010000011.1	10759	12516
GCA_015274105.1	GCA_015274105.1_02441	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGPW010000011.1	12506	12886
GCA_015274105.1	GCA_015274105.1_02463	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACGPW010000011.1	37878	38279
GCA_015274105.1	GCA_015274105.1_02464	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPW010000011.1	38297	39586
GCA_015274105.1	GCA_015274105.1_02465	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JACGPW010000011.1	39586	39900
GCA_015274105.1	GCA_015274105.1_02606	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGPW010000020.1	518	1003
GCA_021366995.1	GCA_021366995.1_01345	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHCPJ010000002.1	491355	491735
GCA_021366995.1	GCA_021366995.1_01346	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.06	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHCPJ010000002.1	491725	493482
GCA_021366995.1	GCA_021366995.1_01347	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHCPJ010000002.1	493589	494434
GCA_021366995.1	GCA_021366995.1_01470	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAHCPJ010000003.1	78748	79062
GCA_021366995.1	GCA_021366995.1_01471	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.90	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCPJ010000003.1	79062	80351
GCA_021366995.1	GCA_021366995.1_01472	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHCPJ010000003.1	80369	80764
GCA_021366995.1	GCA_021366995.1_01820	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.19	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCPJ010000004.1	121132	122424
GCA_021366995.1	GCA_021366995.1_02481	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_000700648.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAHCPJ010000013.1	1808	2293
GCA_001807225.1	GCA_001807225.1_00933	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.07	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV788215.1	741	1595
GCA_003425605.1	GCA_003425605.1_01629	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031679.1	1616417	1617811
GCA_002285125.1	GCA_002285125.1_01095	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	NSGN01000002.1	307839	308693
GCA_000215385.2	GCA_000215385.2_00632	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	AFNN01000018.1	64686	65726
GCA_000215385.2	GCA_000215385.2_01674	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AFNN01000004.1	1413	1841
GCA_030229315.1	GCA_030229315.1_00047	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPHH010000014.1	808	1662
GCA_019375655.1	GCA_019375655.1_00255	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCH010000012.1	23704	24669
GCA_019375655.1	GCA_019375655.1_01731	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	98.65	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCH010000003.1	95198	96388
GCA_019375655.1	GCA_019375655.1_02273	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.38	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCH010000006.1	110358	112283
GCA_009932935.2	GCA_009932935.2_00039	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP049091.1	46959	47351
GCA_009932935.2	GCA_009932935.2_00040	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP049091.1	47369	48661
GCA_009932935.2	GCA_009932935.2_00114	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.79	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP049091.1	116882	118174
GCA_009932935.2	GCA_009932935.2_00254	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP049091.1	269309	270154
GCA_009932935.2	GCA_009932935.2_00255	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.74	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP049091.1	270261	272018
GCA_009932935.2	GCA_009932935.2_00256	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	97.62	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP049091.1	272008	272388
GCA_009932935.2	GCA_009932935.2_02404	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP049092.1	20863	21423
GCA_009932935.2	GCA_009932935.2_02405	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP049092.1	21607	23151
GCA_030516055.1	GCA_030516055.1_01575	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.07	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100377.1	1663693	1664547
GCA_028527845.1	GCA_028527845.1_00590	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JAQPSR010000011.1	27466	28317
GCA_028527845.1	GCA_028527845.1_01974	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQPSR010000008.1	1197	2051
GCA_019391855.1	GCA_019391855.1_00860	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXRC010000001.1	165071	166267
GCA_019391855.1	GCA_019391855.1_01293	cfxA5	broad-spectrum class A beta-lactamase CfxA5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	199	321	61.99	100.00	199	WP_032946415.1	broad-spectrum class A beta-lactamase CfxA5	NA	NA	JAHXRC010000029.1	34587	35186
GCA_019391855.1	GCA_019391855.1_01294	cfxA5	broad-spectrum class A beta-lactamase CfxA5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	199	321	61.99	100.00	199	WP_032946415.1	broad-spectrum class A beta-lactamase CfxA5	NA	NA	JAHXRC010000002.1	37	636
GCA_019391855.1	GCA_019391855.1_01298	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXRC010000002.1	4444	6369
GCA_019391855.1	GCA_019391855.1_01860	cfxA5	broad-spectrum class A beta-lactamase CfxA5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_032946415.1	broad-spectrum class A beta-lactamase CfxA5	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXRC010000045.1	108	1073
GCA_019391855.1	GCA_019391855.1_02058	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXRC010000055.1	674	1639
GCA_007667915.1	GCA_007667915.1_00870	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	430	561	74.69	41.86	430	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VDRZ01000026.1	9	1301
GCA_007667915.1	GCA_007667915.1_01703	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VDRZ01000004.1	203375	204799
GCA_000523555.1	GCA_000523555.1_02214	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.23	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KI965386.1	602551	604029
GCA_019047785.1	GCA_019047785.1_00518	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	122	102	100.00	67.74	124	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP077290.1	554418	554786
GCA_019047785.1	GCA_019047785.1_01054	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	100.00	77.30	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP077290.1	1085840	1086271
GCA_019047785.1	GCA_019047785.1_01092	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.18	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP077290.1	1130906	1132021
GCA_019047785.1	GCA_019047785.1_01093	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	90.79	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP077290.1	1132163	1135822
GCA_019047785.1	GCA_019047785.1_01096	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	94.21	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	CP077290.1	1138238	1140412
GCA_019047785.1	GCA_019047785.1_01989	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	94.33	141	WP_038415208.1	fosfomycin resistance glutathione transferase FosA	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	CP077290.1	2064333	2064758
GCA_019047785.1	GCA_019047785.1_02160	ampC-Ecan	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	381	381	100.00	100.00	381	WP_006178946.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	NF041666.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	CP077290.1	2249656	2250801
GCA_019047785.1	GCA_019047785.1_02713	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	88.81	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP077290.1	2798499	2799392
GCA_029926535.1	GCA_029926535.1_00012	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAREGZ010000010.1	8920	9234
GCA_029926535.1	GCA_029926535.1_00013	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREGZ010000010.1	9234	10523
GCA_029926535.1	GCA_029926535.1_00014	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREGZ010000010.1	10541	10942
GCA_029926535.1	GCA_029926535.1_01005	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREGZ010000002.1	317900	319192
GCA_020736025.1	GCA_020736025.1_01468	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	98.06	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP085951.1	1467100	1468494
GCA_002998355.1	GCA_002998355.1_00816	sul3	sulfonamide-resistant dihydropteroate synthase Sul3	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	HMM	263	263	99.62	80.92	262	WP_000034420.1	sulfonamide-resistant dihydropteroate synthase Sul3	NF000296.1	sulfonamide-resistant dihydropteroate synthase Sul3	CP027227.1	1018073	1018864
GCA_002998355.1	GCA_002998355.1_00819	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP027227.1	1022263	1024182
GCA_900447395.1	GCA_900447395.1_00409	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	491	491	99.80	98.98	490	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	UARI01000001.1	12327	13802
GCA_900447395.1	GCA_900447395.1_00410	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	UARI01000001.1	13795	14475
GCA_900447395.1	GCA_900447395.1_00411	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.26	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	UARI01000001.1	14665	16050
GCA_900447395.1	GCA_900447395.1_00412	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	UARI01000001.1	16079	16432
GCA_900447395.1	GCA_900447395.1_00413	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	98.37	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	UARI01000001.1	16546	17838
GCA_900447395.1	GCA_900447395.1_00414	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	99.43	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	UARI01000001.1	17849	20995
GCA_900447395.1	GCA_900447395.1_00416	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	813	824	98.79	98.28	814	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	UARI01000001.1	21649	24090
GCA_900447395.1	GCA_900447395.1_00420	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	EXACTP	605	605	100.00	100.00	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	UARI01000001.1	25401	27218
GCA_900447395.1	GCA_900447395.1_00421	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	UARI01000001.1	27218	28114
GCA_900447395.1	GCA_900447395.1_00422	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	UARI01000001.1	28154	28534
GCA_900447395.1	GCA_900447395.1_00423	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	UARI01000001.1	28539	29468
GCA_900447395.1	GCA_900447395.1_00424	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	UARI01000001.1	29523	30203
GCA_900447395.1	GCA_900447395.1_00425	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.36	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	UARI01000001.1	30200	31600
GCA_900447395.1	GCA_900447395.1_00426	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	94.44	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	UARI01000001.1	31816	32250
GCA_900447395.1	GCA_900447395.1_00431	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	99.29	141	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	UARI01000001.1	34798	35223
GCA_900447395.1	GCA_900447395.1_00432	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.07	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	UARI01000001.1	35236	36525
GCA_900447395.1	GCA_900447395.1_00433	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	98.46	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	UARI01000001.1	36573	38324
GCA_900447395.1	GCA_900447395.1_00434	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	90.83	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UARI01000001.1	38342	38704
GCA_900447395.1	GCA_900447395.1_00435	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	116	116	100.00	98.28	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	UARI01000001.1	38756	39106
GCA_900447395.1	GCA_900447395.1_00642	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	86.62	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	UARI01000008.1	94323	95225
GCA_900447395.1	GCA_900447395.1_01537	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	141	141	100.00	86.52	141	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	UARI01000005.1	212086	212511
GCA_900447395.1	GCA_900447395.1_03312	fos	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	87.41	135	WP_015741374.1	FosA family fosfomycin resistance glutathione transferase	NF000339.2	FosA family fosfomycin resistance glutathione transferase	UARI01000010.1	677529	677939
GCA_900447395.1	GCA_900447395.1_03524	blaCSA-1	class C beta-lactamase CSA-1	core	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	ALLELEP	375	375	100.00	100.00	375	WP_007888761.1	class C beta-lactamase CSA-1	NF033698.1	CSA family class C beta-lactamase	UARI01000010.1	860073	861200
GCA_900447395.1	GCA_900447395.1_04843	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	PARTIALP	121	189	64.02	99.17	121	CDY80020.1	small heat shock protein sHSP20	NA	NA	UARI01000010.1	2068521	2068886
GCA_900447395.1	GCA_900447395.1_04844	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	98.95	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	UARI01000010.1	2068992	2071841
GCA_900447395.1	GCA_900447395.1_04848	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	96.71	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	UARI01000010.1	2073011	2073469
GCA_900447395.1	GCA_900447395.1_04849	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.01	304	APX31172.1	heat resistance protein YfdX1	NA	NA	UARI01000010.1	2073492	2074406
GCA_900447395.1	GCA_900447395.1_04850	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	98.64	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	UARI01000010.1	2074509	2075396
GCA_900447395.1	GCA_900447395.1_04851	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	98.03	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	UARI01000010.1	2075486	2076097
GCA_900447395.1	GCA_900447395.1_04853	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	PARTIALP	103	146	70.55	98.06	103	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	UARI01000010.1	2077440	2077751
GCA_900447395.1	GCA_900447395.1_04854	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	569	571	99.65	98.59	569	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	UARI01000010.1	2077755	2079464
GCA_900447395.1	GCA_900447395.1_04855	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	97.58	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	UARI01000010.1	2079467	2079964
GCA_900454685.1	GCA_900454685.1_00491	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	UATM01000032.1	431974	433893
GCA_020739965.1	GCA_020739965.1_01722	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJGBA010000004.1	28434	29723
GCA_020739965.1	GCA_020739965.1_01723	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAJGBA010000004.1	29741	30142
GCA_020739965.1	GCA_020739965.1_02221	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAJGBA010000006.1	113476	114549
GCA_020739965.1	GCA_020739965.1_02403	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJGBA010000008.1	60523	61812
GCA_001054195.1	GCA_001054195.1_00728	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVXO01000032.1	32689	34131
GCA_001054195.1	GCA_001054195.1_00734	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JVXO01000032.1	37916	38731
GCA_001054195.1	GCA_001054195.1_00738	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JVXO01000032.1	40415	40834
GCA_001054195.1	GCA_001054195.1_00739	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JVXO01000032.1	40834	41670
GCA_001054195.1	GCA_001054195.1_00741	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JVXO01000032.1	41874	43049
GCA_001054195.1	GCA_001054195.1_00743	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JVXO01000032.1	43559	44413
GCA_007004275.1	GCA_007004275.1_00368	str	streptomycin adenylyltransferase Str	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	282	282	100.00	100.00	282	WP_031916103.1	streptomycin adenylyltransferase Str	NF000062.1	streptomycin adenylyltransferase Str	VJMP01000018.1	851	1699
GCA_007004275.1	GCA_007004275.1_01148	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	VJMP01000002.1	327317	328609
GCA_001811365.1	GCA_001811365.1_00354	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV804556.1	361630	363549
GCA_016728665.1	GCA_016728665.1_00933	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP068161.1	1008361	1009212
GCA_016728665.1	GCA_016728665.1_00942	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP068161.1	1017094	1017948
GCA_016728665.1	GCA_016728665.1_00944	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP068161.1	1019151	1020326
GCA_022695935.1	GCA_022695935.1_00052	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKUUU010000001.1	50922	52928
GCA_022695935.1	GCA_022695935.1_00054	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	304	585	51.97	99.67	304	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JAKUUU010000001.1	53872	54786
GCA_022695935.1	GCA_022695935.1_00055	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JAKUUU010000001.1	54786	55157
GCA_022695935.1	GCA_022695935.1_00062	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.55	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKUUU010000001.1	59505	60794
GCA_022695935.1	GCA_022695935.1_00065	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKUUU010000001.1	62962	63309
GCA_022695935.1	GCA_022695935.1_00117	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKUUU010000001.1	118490	119782
GCA_022695935.1	GCA_022695935.1_00196	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKUUU010000001.1	195557	196402
GCA_022695935.1	GCA_022695935.1_00197	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKUUU010000001.1	196509	198266
GCA_022695935.1	GCA_022695935.1_00198	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKUUU010000001.1	198256	198636
GCA_022695935.1	GCA_022695935.1_02245	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JAKUUU010000001.1	2228480	2228977
GCA_022695935.1	GCA_022695935.1_02295	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JAKUUU010000002.1	19516	22590
GCA_022695935.1	GCA_022695935.1_02302	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKUUU010000002.1	28265	29110
GCA_022695935.1	GCA_022695935.1_02303	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKUUU010000002.1	29217	30974
GCA_022695935.1	GCA_022695935.1_02304	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKUUU010000002.1	30964	31344
GCA_022695935.1	GCA_022695935.1_02308	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	PARTIALP	264	522	50.57	100.00	264	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NA	NA	JAKUUU010000003.1	40	834
GCA_019703795.1	GCA_019703795.1_01006	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	AP018783.1	985664	986524
GCA_019703795.1	GCA_019703795.1_01017	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	AP018783.1	993324	994160
GCA_019703795.1	GCA_019703795.1_01018	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	AP018783.1	994160	994963
GCA_019703795.1	GCA_019703795.1_01019	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	AP018783.1	995024	995839
GCA_019703795.1	GCA_019703795.1_01020	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	AP018783.1	996239	997054
GCA_019703795.1	GCA_019703795.1_01701	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018783.1	1678659	1680053
GCA_001885595.1	GCA_001885595.1_00283	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	MBDM01000001.1	265645	266862
GCA_001885595.1	GCA_001885595.1_00284	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	MBDM01000001.1	266982	268445
GCA_001885595.1	GCA_001885595.1_00289	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	MBDM01000001.1	270311	270739
GCA_003516125.3	GCA_003516125.3_01117	fos	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	87.41	135	WP_015741374.1	FosA family fosfomycin resistance glutathione transferase	NF000339.2	FosA family fosfomycin resistance glutathione transferase	CP027107.2	1154729	1155139
GCA_003516125.3	GCA_003516125.3_01256	blaCSA-1	class C beta-lactamase CSA-1	core	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	ALLELEP	375	375	100.00	100.00	375	WP_007888761.1	class C beta-lactamase CSA-1	NF033698.1	CSA family class C beta-lactamase	CP027107.2	1296583	1297710
GCA_003516125.3	GCA_003516125.3_03387	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	86.29	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP027107.2	3533275	3534177
GCA_003516125.3	GCA_003516125.3_04173	cpa	omptin family outer membrane protease Cpa	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	ASR82161.1	omptin family outer membrane protease Cpa	NA	NA	CP049260.1	4764	5702
GCA_001810555.1	GCA_001810555.1_00834	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV801846.1	65101	65955
GCA_000477995.1	GCA_000477995.1_02406	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515726.1	826	1680
GCA_000019825.1	GCA_000019825.1_00908	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP001015.1	864389	865588
GCA_000019825.1	GCA_000019825.1_01248	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP001015.1	1192417	1194336
GCA_000019825.1	GCA_000019825.1_01260	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP001015.1	1204240	1204977
GCA_027694265.1	GCA_027694265.1_00316	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQEVV010000001.1	308992	310911
GCA_027694265.1	GCA_027694265.1_00327	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQEVV010000001.1	320829	321566
GCA_002591215.1	GCA_002591215.1_00925	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP023970.1	934270	934689
GCA_002591215.1	GCA_002591215.1_01445	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP023970.1	1462493	1463566
GCA_002591215.1	GCA_002591215.1_01575	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP023970.1	1604242	1605534
GCA_022346305.1	GCA_022346305.1_00345	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDB010000015.1	667	1521
GCA_022346305.1	GCA_022346305.1_00351	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAKRDB010000015.1	8470	9285
GCA_022346305.1	GCA_022346305.1_00354	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JAKRDB010000015.1	10586	11389
GCA_022346305.1	GCA_022346305.1_00355	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAKRDB010000015.1	11389	12225
GCA_022346305.1	GCA_022346305.1_00356	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAKRDB010000015.1	12429	13604
GCA_009496805.1	GCA_009496805.1_01546	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIIY01000006.1	37660	38859
GCA_959597085.1	GCA_959597085.1_00290	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.66	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAUFXV010000003.1	34546	36204
GCA_024592595.1	GCA_024592595.1_00600	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JANJGS010000001.1	686668	687483
GCA_024592595.1	GCA_024592595.1_00603	blaOXA-347	class D beta-lactamase OXA-347	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	274	274	100.00	100.00	274	WP_004295324.1	class D beta-lactamase OXA-347	NF012161.0	class D beta-lactamase	JANJGS010000001.1	688821	689645
GCA_024592595.1	GCA_024592595.1_00605	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JANJGS010000001.1	689848	690648
GCA_024592595.1	GCA_024592595.1_00623	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	648	641	99.53	97.96	638	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANJGS010000001.1	712100	714046
GCA_024592595.1	GCA_024592595.1_02717	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANJGS010000001.1	3065524	3067449
GCA_000560365.1	GCA_000560365.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	KK023228.1	39127	41133
GCA_000560365.1	GCA_000560365.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	KK023228.1	41233	42219
GCA_000560365.1	GCA_000560365.1_00143	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	KK023228.1	157685	159043
GCA_000560365.1	GCA_000560365.1_00346	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	KK023228.1	387353	388708
GCA_000560365.1	GCA_000560365.1_00384	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	KK023228.1	421882	422493
GCA_000560365.1	GCA_000560365.1_00864	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.11	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	KK023228.1	901269	901997
GCA_000560365.1	GCA_000560365.1_00865	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.52	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	KK023228.1	902021	902749
GCA_000560365.1	GCA_000560365.1_01485	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	KK023228.1	1564134	1565111
GCA_000560365.1	GCA_000560365.1_01486	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	KK023228.1	1565113	1566051
GCA_000560365.1	GCA_000560365.1_01661	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	KK023228.1	1712774	1713526
GCA_000560365.1	GCA_000560365.1_01835	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KK023228.1	1905858	1907150
GCA_000560365.1	GCA_000560365.1_01878	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	KK023228.1	1944392	1945108
GCA_000560365.1	GCA_000560365.1_01881	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	KK023228.1	1946883	1947605
GCA_000560365.1	GCA_000560365.1_01882	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	KK023228.1	1947730	1948437
GCA_000560365.1	GCA_000560365.1_01892	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	KK023228.1	1960087	1961070
GCA_000560365.1	GCA_000560365.1_01893	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	KK023228.1	1961072	1962007
GCA_000560365.1	GCA_000560365.1_02052	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	KK023228.1	2090518	2090868
GCA_000560365.1	GCA_000560365.1_02057	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	KK023228.1	2093082	2093573
GCA_000560365.1	GCA_000560365.1_02134	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	KK023228.1	2151228	2151362
GCA_000560365.1	GCA_000560365.1_02282	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.58	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	KK023228.1	2303411	2304853
GCA_000560365.1	GCA_000560365.1_02457	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	KK023228.1	2456601	2457020
GCA_000560365.1	GCA_000560365.1_02544	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	KK023228.1	2546259	2547224
GCA_000560365.1	GCA_000560365.1_02545	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	KK023228.1	2547791	2548738
GCA_000560365.1	GCA_000560365.1_02546	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	KK023228.1	2548740	2549717
GCA_000560365.1	GCA_000560365.1_02771	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	KK023228.1	2788163	2789692
GCA_000560365.1	GCA_000560365.1_02805	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KK023228.1	2833025	2834077
GCA_022318405.1	GCA_022318405.1_00875	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP090882.1	846007	847206
GCA_022318405.1	GCA_022318405.1_01076	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP090882.1	1042894	1043631
GCA_022318405.1	GCA_022318405.1_01087	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_063856403.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP090882.1	1053555	1055474
GCA_022318405.1	GCA_022318405.1_01110	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP090882.1	1076312	1076962
GCA_900755465.1	GCA_900755465.1_00672	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAAEGP010000035.1	3118	4758
GCA_002248115.3	GCA_002248115.3_00031	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.75	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP041099.1	29459	30643
GCA_002248115.3	GCA_002248115.3_00847	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	140	141	98.58	78.42	139	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP041099.1	852007	852429
GCA_002248115.3	GCA_002248115.3_01175	oqxB19	multidrug efflux RND transporter permease subunit OqxB19	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	ALLELEP	1050	1050	100.00	100.00	1050	WP_004149399.1	multidrug efflux RND transporter permease subunit OqxB19	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP041099.1	1183196	1186348
GCA_002248115.3	GCA_002248115.3_01176	oqxA10	multidrug efflux RND transporter periplasmic adaptor subunit OqxA10	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	ALLELEP	391	391	100.00	100.00	391	WP_004149398.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA10	NF000272.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	CP041099.1	1186372	1187547
GCA_002248115.3	GCA_002248115.3_02282	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	97	102	100.00	64.15	106	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP041099.1	2313126	2313419
GCA_002248115.3	GCA_002248115.3_02692	blaSHV-1	broad-spectrum class A beta-lactamase SHV-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_001620095.1	broad-spectrum class A beta-lactamase SHV-1	NF000285.3	SHV family class A beta-lactamase	CP041099.1	2718169	2719029
GCA_002248115.3	GCA_002248115.3_03369	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	410	410	100.00	100.00	410	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP041099.1	3423264	3424496
GCA_002248115.3	GCA_002248115.3_04450	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_004146118.1	FosA5 family fosfomycin resistance glutathione transferase	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP041099.1	4529585	4530004
GCA_002248115.3	GCA_002248115.3_05041	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP041099.1	5148274	5149176
GCA_002248115.3	GCA_002248115.3_05162	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	91.61	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP041100.1	18084	18515
GCA_002248115.3	GCA_002248115.3_05163	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	491	491	100.00	100.00	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP041100.1	18766	20241
GCA_002248115.3	GCA_002248115.3_05164	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	226	226	100.00	100.00	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP041100.1	20234	20914
GCA_002248115.3	GCA_002248115.3_05165	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	461	461	100.00	100.00	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP041100.1	21104	22489
GCA_002248115.3	GCA_002248115.3_05166	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP041100.1	22518	22871
GCA_002248115.3	GCA_002248115.3_05167	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	97.67	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP041100.1	22985	24277
GCA_002248115.3	GCA_002248115.3_05168	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.85	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP041100.1	24288	27434
GCA_002248115.3	GCA_002248115.3_05170	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	94.49	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP041100.1	28088	30535
GCA_002248115.3	GCA_002248115.3_05174	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	EXACTP	605	605	100.00	100.00	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP041100.1	32516	34333
GCA_002248115.3	GCA_002248115.3_05175	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP041100.1	34333	35229
GCA_002248115.3	GCA_002248115.3_05176	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP041100.1	35269	35649
GCA_002248115.3	GCA_002248115.3_05177	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	BLASTP	309	309	100.00	99.68	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP041100.1	35654	36583
GCA_002248115.3	GCA_002248115.3_05178	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP041100.1	36638	37318
GCA_002248115.3	GCA_002248115.3_05179	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.14	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP041100.1	37315	38715
GCA_002248115.3	GCA_002248115.3_05180	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	94.44	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	CP041100.1	38932	39366
GCA_002248115.3	GCA_002248115.3_05191	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	141	141	100.00	100.00	141	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP041100.1	47402	47827
GCA_002248115.3	GCA_002248115.3_05192	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	429	429	100.00	100.00	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP041100.1	47840	49129
GCA_002248115.3	GCA_002248115.3_05193	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	583	583	100.00	100.00	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP041100.1	49177	50928
GCA_002248115.3	GCA_002248115.3_05194	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	91.67	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP041100.1	50946	51308
GCA_002248115.3	GCA_002248115.3_05195	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	116	116	100.00	100.00	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP041100.1	51358	51708
GCA_002248115.3	GCA_002248115.3_05212	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	931	949	97.89	99.25	929	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP041100.1	61154	63949
GCA_002248115.3	GCA_002248115.3_05213	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	EXACTP	189	189	100.00	100.00	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	CP041100.1	64064	64633
GCA_002248115.3	GCA_002248115.3_05227	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP041100.1	75206	75442
GCA_002248115.3	GCA_002248115.3_05228	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP041100.1	75439	75804
GCA_002248115.3	GCA_002248115.3_05229	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	93.23	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP041100.1	75822	77507
GCA_002248115.3	GCA_002248115.3_05230	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP041100.1	77546	77971
GCA_002248115.3	GCA_002248115.3_05231	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	85.71	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP041100.1	77999	78274
GCA_002248115.3	GCA_002248115.3_05232	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	126	116	99.14	99.13	115	CAA70196.1	mercuric transport protein MerT	NA	NA	CP041100.1	78290	78670
GCA_002248115.3	GCA_002248115.3_05233	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP041100.1	78742	79197
GCA_002248115.3	GCA_002248115.3_05455	dfrA50	trimethoprim-resistant dihydrofolate reductase DfrA50	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	158	158	100.00	99.37	158	WP_040203768.1	trimethoprim-resistant dihydrofolate reductase DfrA50	NF047323.1	trimethoprim-resistant dihydrofolate reductase DfrA50	CP041101.1	98274	98750
GCA_002248115.3	GCA_002248115.3_05485	blaCTX-M-14	extended-spectrum class A beta-lactamase CTX-M-14	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_001617865.1	extended-spectrum class A beta-lactamase CTX-M-14	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	CP041102.1	16823	17698
GCA_002248115.3	GCA_002248115.3_05490	mph(A)	Mph(A) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	301	301	100.00	100.00	301	WP_000219391.1	Mph(A) family macrolide 2-phosphotransferase	NF000254.1	Mph(A) family macrolide 2-phosphotransferase	CP041102.1	22356	23261
GCA_002248115.3	GCA_002248115.3_05493	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_002321849.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP041102.1	25087	25824
GCA_002248115.3	GCA_002248115.3_05499	aac(3)-IIe	aminoglycoside N-acetyltransferase AAC(3)-IIe	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	EXACTP	286	286	100.00	100.00	286	WP_000557452.1	aminoglycoside N-acetyltransferase AAC(3)-IIe	NF033080.0	AAC(3)-II family aminoglycoside N-acetyltransferase	CP041102.1	30098	30958
GCA_002248115.3	GCA_002248115.3_05603	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	404	404	100.00	99.50	404	WP_000214123.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP041103.1	19581	20795
GCA_002248115.3	GCA_002248115.3_05606	tet(A)	tetracycline efflux MFS transporter Tet(A)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	399	399	100.00	100.00	399	WP_000804063.1	tetracycline efflux MFS transporter Tet(A)	NF012193.0	tetracycline efflux MFS transporter Tet(A)	CP041103.1	21395	22594
GCA_002248115.3	GCA_002248115.3_05609	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP041103.1	23930	24766
GCA_002248115.3	GCA_002248115.3_05610	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP041103.1	24766	25569
GCA_002248115.3	GCA_002248115.3_05611	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP041103.1	25630	26445
GCA_002248115.3	GCA_002248115.3_05646	blaCMY-2	extended-spectrum class C beta-lactamase CMY-2	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	381	381	100.00	100.00	381	WP_000976514.1	extended-spectrum class C beta-lactamase CMY-2	NF000191.1	CMY-2 family class C beta-lactamase	CP041103.1	54786	55931
GCA_002248115.3	GCA_002248115.3_05698	mcr-3.21	phosphoethanolamine--lipid A transferase MCR-3.21	core	AMR	AMR	COLISTIN	COLISTIN	ALLELEP	541	541	100.00	100.00	541	WP_094312656.1	phosphoethanolamine--lipid A transferase MCR-3.21	NF033408.5	MCR-3 family phosphoethanolamine--lipid A transferase	CP041104.1	18146	19771
GCA_001679495.1	GCA_001679495.1_00991	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LZOX01000013.1	238246	239640
GCA_001679495.1	GCA_001679495.1_01733	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LZOX01000017.1	139101	140741
GCA_024170065.1	GCA_024170065.1_00983	blaPOM	POM family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	286	286	100.00	99.65	286	WP_044403015.1	subclass B3 metallo-beta-lactamase POM-1	NF000438.2	POM family subclass B3 metallo-beta-lactamase	JALJXM010000001.1	1078743	1079603
GCA_024170065.1	GCA_024170065.1_01112	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	414	100.00	75.48	416	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	JALJXM010000001.1	1192770	1194011
GCA_024170065.1	GCA_024170065.1_01328	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	260	259	99.61	41.76	261	WP_014386410.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	JALJXM010000001.1	1467764	1468546
GCA_024170065.1	GCA_024170065.1_03944	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	213	221	95.02	68.57	210	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	JALJXM010000001.1	4238325	4238966
GCA_014266895.1	GCA_014266895.1_00115	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMUP010000013.1	2710	3270
GCA_014266895.1	GCA_014266895.1_00116	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMUP010000013.1	3454	4998
GCA_014266895.1	GCA_014266895.1_00203	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMUP010000017.1	7103	7450
GCA_014266895.1	GCA_014266895.1_00207	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMUP010000017.1	11133	12425
GCA_014266895.1	GCA_014266895.1_00209	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMUP010000018.1	238	981
GCA_014266895.1	GCA_014266895.1_00210	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMUP010000018.1	1198	1602
GCA_014266895.1	GCA_014266895.1_00216	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMUP010000020.1	1475	2209
GCA_014266895.1	GCA_014266895.1_00670	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMUP010000003.1	38825	40465
GCA_014266895.1	GCA_014266895.1_00728	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMUP010000003.1	99517	99888
GCA_014266895.1	GCA_014266895.1_00729	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMUP010000003.1	99888	101645
GCA_014266895.1	GCA_014266895.1_00730	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMUP010000003.1	101745	103751
GCA_014266895.1	GCA_014266895.1_00991	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMUP010000006.1	41988	43280
GCA_014266895.1	GCA_014266895.1_01049	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMUP010000007.1	10298	10678
GCA_014266895.1	GCA_014266895.1_01050	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMUP010000007.1	10668	12425
GCA_014266895.1	GCA_014266895.1_01051	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMUP010000007.1	12532	13377
GCA_003369965.1	GCA_003369965.1_00479	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	LGPA01000001.1	611501	612979
GCA_003369965.1	GCA_003369965.1_00993	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	99.71	346	WP_000691746.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	LGPA01000003.1	141692	142732
GCA_001810195.1	GCA_001810195.1_01207	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV800159.1	30893	31747
GCA_900095495.1	GCA_900095495.1_02567	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.56	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	LT622246.1	3421317	3422198
GCA_900095495.1	GCA_900095495.1_03999	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	91.87	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	LT622246.1	5124584	5125915
GCA_000251385.2	GCA_000251385.2_00825	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AIKO01000004.1	413879	415669
GCA_943912715.1	GCA_943912715.1_01871	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CALTVO010000106.1	5678	6532
GCA_030176215.1	GCA_030176215.1_01064	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVD010000027.1	731	1585
GCA_002407165.1	GCA_002407165.1_01526	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP023539.1	1497418	1497837
GCA_002407165.1	GCA_002407165.1_02041	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP023539.1	2025643	2026716
GCA_002407165.1	GCA_002407165.1_02174	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP023539.1	2169302	2170594
GCA_002407165.1	GCA_002407165.1_02321	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP023539.1	2317318	2318163
GCA_002407165.1	GCA_002407165.1_02322	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP023539.1	2318270	2320027
GCA_002407165.1	GCA_002407165.1_02323	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP023539.1	2320017	2320397
GCA_011082265.1	GCA_011082265.1_01237	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	99.80	89.82	491	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP049781.1	1312545	1314023
GCA_011082265.1	GCA_011082265.1_01288	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_063856405.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP049781.1	1364045	1365964
GCA_000238075.1	GCA_000238075.1_00575	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JH414504.1	629576	631495
GCA_000238075.1	GCA_000238075.1_01960	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	92.68	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JH414506.1	383544	385022
GCA_009378275.1	GCA_009378275.1_00985	blaBRO-2	class A beta-lactamase BRO-2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003665544.1	class A beta-lactamase BRO-2	NF033103.1	class A beta-lactamase	NXCH01000004.1	101526	102467
GCA_006874565.1	GCA_006874565.1_00672	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP029749.1	595603	597522
GCA_017655665.1	GCA_017655665.1_00505	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040412.1	497035	497409
GCA_017655665.1	GCA_017655665.1_00664	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	246	244	99.59	87.35	245	WP_011117197.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP040412.1	664623	665363
GCA_030503545.1	GCA_030503545.1_01568	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAUKOV010000004.1	96337	97626
GCA_030503545.1	GCA_030503545.1_01571	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAUKOV010000004.1	99794	100141
GCA_002159215.1	GCA_002159215.1_00942	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	292	304	97.04	39.39	297	WP_064964607.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	NFHB01000002.1	220018	220896
GCA_002159215.1	GCA_002159215.1_01420	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	NFHB01000003.1	318321	320246
GCA_028767065.1	GCA_028767065.1_00137	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAJUOT010000001.1	145224	146441
GCA_028767065.1	GCA_028767065.1_00138	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAJUOT010000001.1	146561	148024
GCA_028767065.1	GCA_028767065.1_00143	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAJUOT010000001.1	149750	151669
GCA_900186935.1	GCA_900186935.1_00195	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	301	301	100.00	100.00	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	LT906437.1	205066	205971
GCA_900186935.1	GCA_900186935.1_00466	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	459	459	100.00	100.00	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	LT906437.1	459476	460855
GCA_900186935.1	GCA_900186935.1_01309	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	99.76	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	LT906437.1	1269725	1270963
GCA_900186935.1	GCA_900186935.1_01310	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	99.52	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	LT906437.1	1271214	1271846
GCA_900186935.1	GCA_900186935.1_01312	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	99.81	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	LT906437.1	1272483	1274051
GCA_900186935.1	GCA_900186935.1_01715	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	507	100.00	99.41	507	AAD54074.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	LT906437.1	1648131	1649654
GCA_000260755.1	GCA_000260755.1_00521	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AJTA01000019.1	3389	5308
GCA_005403265.1	GCA_005403265.1_01714	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	BJCR01000064.1	15451	17370
GCA_009717665.1	GCA_009717665.1_00079	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYZ01000011.1	17923	19386
GCA_009717665.1	GCA_009717665.1_00080	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYZ01000011.1	19506	20723
GCA_009717665.1	GCA_009717665.1_00448	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.39	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	WMYZ01000001.1	104740	106218
GCA_009717665.1	GCA_009717665.1_01807	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMYZ01000006.1	401313	403049
GCA_009717665.1	GCA_009717665.1_01808	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMYZ01000006.1	403051	404775
GCA_009717665.1	GCA_009717665.1_01840	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	WMYZ01000006.1	431809	433728
GCA_001233565.1	GCA_001233565.1_00647	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUEZ01000003.1	52466	53758
GCA_001233565.1	GCA_001233565.1_02246	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	142	96.48	74.45	137	WP_204376221.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CUEZ01000027.1	9656	10072
GCA_001233565.1	GCA_001233565.1_02350	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CUEZ01000033.1	82	927
GCA_001233565.1	GCA_001233565.1_02351	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CUEZ01000033.1	1034	2791
GCA_001233565.1	GCA_001233565.1_02352	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CUEZ01000033.1	2781	3161
GCA_003352345.1	GCA_003352345.1_00783	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.57	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031236.1	784000	785394
GCA_003352345.1	GCA_003352345.1_00971	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	123	100.00	44.12	136	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP031236.1	982126	982548
GCA_003352345.1	GCA_003352345.1_01290	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP031236.1	1288462	1289322
GCA_018499505.1	GCA_018499505.1_00602	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.91	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAHDAC010000001.1	310793	312517
GCA_018499505.1	GCA_018499505.1_00603	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.01	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAHDAC010000001.1	312519	314255
GCA_018499505.1	GCA_018499505.1_01263	erm(T)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_002345002.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAHDAC010000019.1	244	978
GCA_000237265.1	GCA_000237265.1_00030	blaZ	mecC-type penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	283	283	100.00	100.00	283	WP_000733402.1	mecC-type penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033140.0	mecC-type penicillin-hydrolyzing class A beta-lactamase BlaZ	FR821779.1	34736	35587
GCA_000237265.1	GCA_000237265.1_00031	mecC	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecC	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	665	665	100.00	100.00	665	WP_000725529.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecC	NF000407.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecC	FR821779.1	35681	37678
GCA_000237265.1	GCA_000237265.1_00032	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	584	585	100.00	44.96	585	WP_000952923.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	FR821779.1	37779	39533
GCA_000237265.1	GCA_000237265.1_00033	mecI	mecC-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	124	124	100.00	100.00	124	WP_000196386.1	mecC-type methicillin resistance repressor MecI	NF000244.1	mecC-type methicillin resistance repressor MecI	FR821779.1	39530	39904
GCA_000237265.1	GCA_000237265.1_00058	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.19	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	FR821779.1	61688	62080
GCA_000237265.1	GCA_000237265.1_00059	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	FR821779.1	62098	63387
GCA_000237265.1	GCA_000237265.1_00120	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100296.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	FR821779.1	130970	132328
GCA_000237265.1	GCA_000237265.1_00311	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.67	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	FR821779.1	354083	355438
GCA_000237265.1	GCA_000237265.1_00350	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	FR821779.1	390559	391170
GCA_000237265.1	GCA_000237265.1_01601	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	94.40	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	FR821779.1	1656607	1657359
GCA_000237265.1	GCA_000237265.1_01769	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	FR821779.1	1847981	1849273
GCA_000237265.1	GCA_000237265.1_01803	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.90	238	ABD30999.1	serine protease SplE	NA	NA	FR821779.1	1878631	1879347
GCA_000237265.1	GCA_000237265.1_01806	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	95.83	240	ABD31003.1	serine protease SplB	NA	NA	FR821779.1	1881130	1881852
GCA_000237265.1	GCA_000237265.1_01807	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	96.17	235	ABD31004.1	serine protease SplA	NA	NA	FR821779.1	1881977	1882684
GCA_000237265.1	GCA_000237265.1_01819	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.04	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	FR821779.1	1895324	1896259
GCA_000237265.1	GCA_000237265.1_02142	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	96.88	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	FR821779.1	2191023	2192465
GCA_000237265.1	GCA_000237265.1_02308	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	98.56	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	FR821779.1	2336478	2336897
GCA_000237265.1	GCA_000237265.1_02396	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	FR821779.1	2427389	2428354
GCA_000237265.1	GCA_000237265.1_02397	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	FR821779.1	2428922	2429869
GCA_000237265.1	GCA_000237265.1_02398	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.15	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	FR821779.1	2429871	2430848
GCA_000237265.1	GCA_000237265.1_02615	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	FR821779.1	2663818	2665347
GCA_000237265.1	GCA_000237265.1_02653	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	FR821779.1	2711138	2712190
GCA_001483405.1	GCA_001483405.1_00239	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	598	598	100.00	99.16	598	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK	CP013722.1	234577	236373
GCA_001483405.1	GCA_001483405.1_00446	aut	peptidoglycan hydrolase Auto	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	572	572	100.00	100.00	572	ADB67911.1	peptidoglycan hydrolase Auto	NA	NA	CP013722.1	422075	423793
GCA_001483405.1	GCA_001483405.1_00607	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	98.47	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP013722.1	572236	573807
GCA_001483405.1	GCA_001483405.1_00927	inl-lmo0610	lmo0610 family class 1 internalin Inl-lmo0610	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	589	589	100.00	99.32	589	AEO24908.1	lmo0610 family class 1 internalin Inl-lmo0610	NA	NA	CP013722.1	875484	877253
GCA_001483405.1	GCA_001483405.1_01044	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	611	605	100.00	98.53	611	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA	CP013722.1	990622	992457
GCA_001483405.1	GCA_001483405.1_01106	gadD1	glutamate decarboxylase GadD1	plus	STRESS	ACID	NA	NA	BLASTP	462	462	100.00	99.78	462	CAC98526.1	glutamate decarboxylase GadD1	NA	NA	CP013722.1	1047617	1049005
GCA_001483405.1	GCA_001483405.1_01115	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	99.51	205	AEO24735.1	nuclear targeted protein LntA	NA	NA	CP013722.1	1060636	1061253
GCA_001483405.1	GCA_001483405.1_01118	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	99.68	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA	CP013722.1	1062924	1064816
GCA_001483405.1	GCA_001483405.1_01119	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	37.02	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA	CP013722.1	1064901	1067303
GCA_001483405.1	GCA_001483405.1_01143	inlF	class 1 internalin InlF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	821	821	100.00	99.63	821	AEO24707.1	class 1 internalin InlF	NA	NA	CP013722.1	1089725	1092190
GCA_001483405.1	GCA_001483405.1_01222	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1783	1778	100.00	99.49	1778	AEO24631.1	class 1 internalin InlI	NA	NA	CP013722.1	1155836	1161187
GCA_001483405.1	GCA_001483405.1_01235	vip	cell invasion LPXTG protein Vip	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	399	399	100.00	99.50	399	AEO24620.1	cell invasion LPXTG protein Vip	NF033201.1	cell invasion LPXTG protein Vip	CP013722.1	1180947	1182146
GCA_001483405.1	GCA_001483405.1_01286	inlE	class 1 internalin InlE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	499	499	100.00	99.60	499	CAA07458.1	class 1 internalin InlE	NA	NA	CP013722.1	1232745	1234244
GCA_001483405.1	GCA_001483405.1_01287	inlD	class 1 internalin InlD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	567	567	100.00	99.82	567	AAB67970.1	class 1 internalin InlD	NA	NA	CP013722.1	1234453	1236156
GCA_001483405.1	GCA_001483405.1_01289	inlG	class 1 internalin InlG	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	490	490	100.00	99.80	490	AEO05269.1	class 1 internalin InlG	NA	NA	CP013722.1	1238145	1239617
GCA_001483405.1	GCA_001483405.1_01921	ami	autolysin Ami	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	917	917	100.00	99.56	917	ASH48222.1	autolysin Ami	NA	NA	CP013722.1	1840150	1842903
GCA_001483405.1	GCA_001483405.1_02010	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	383	388	98.71	99.22	383	AEO26812.1	class 3 internalin InlP	NA	NA	CP013722.1	1932637	1933788
GCA_001483405.1	GCA_001483405.1_02491	inlL	class 1 internalin InlL	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	626	626	100.00	98.40	626	CDG45949.1	class 1 internalin InlL	NA	NA	CP013722.1	2373679	2375559
GCA_001483405.1	GCA_001483405.1_02745	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	100.00	296	AHJ03495.1	class 3 internalin InlC	NA	NA	CP013722.1	2620527	2621420
GCA_001483405.1	GCA_001483405.1_02833	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	133	133	100.00	100.00	133	WP_010989789.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP013722.1	2713783	2714184
GCA_009379625.1	GCA_009379625.1_00066	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXDJ01000001.1	54577	55518
GCA_019456835.1	GCA_019456835.1_00688	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	99.73	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JACVTA010000028.1	13382	14515
GCA_030360715.1	GCA_030360715.1_00132	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAUCBF010000001.1	136111	137403
GCA_030360715.1	GCA_030360715.1_02356	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAUCBF010000015.1	51599	52891
GCA_030360715.1	GCA_030360715.1_02360	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAUCBF010000015.1	56574	56921
GCA_030360715.1	GCA_030360715.1_02368	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAUCBF010000016.1	1570	1950
GCA_030360715.1	GCA_030360715.1_02369	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAUCBF010000016.1	1940	3697
GCA_030360715.1	GCA_030360715.1_02370	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAUCBF010000016.1	3804	4649
GCA_030360715.1	GCA_030360715.1_02570	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAUCBF010000021.1	3784	5250
GCA_030230485.1	GCA_030230485.1_00067	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASPDF010000008.1	60473	61762
GCA_030230485.1	GCA_030230485.1_00069	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASPDF010000008.1	62069	62449
GCA_030230485.1	GCA_030230485.1_00070	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASPDF010000008.1	62439	64196
GCA_030230485.1	GCA_030230485.1_00071	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASPDF010000008.1	64303	65148
GCA_030230485.1	GCA_030230485.1_00103	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JASPDF010000020.1	2259	2663
GCA_030230485.1	GCA_030230485.1_00104	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JASPDF010000020.1	2880	3623
GCA_030230485.1	GCA_030230485.1_02205	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JASPDF010000006.1	4105	5178
GCA_030230485.1	GCA_030230485.1_02366	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASPDF010000016.1	88	933
GCA_030230485.1	GCA_030230485.1_02367	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASPDF010000016.1	1040	2797
GCA_030230485.1	GCA_030230485.1_02368	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASPDF010000016.1	2787	3167
GCA_030230485.1	GCA_030230485.1_02371	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JASPDF010000016.1	4953	5513
GCA_030230485.1	GCA_030230485.1_02372	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JASPDF010000016.1	5697	7241
GCA_008180305.1	GCA_008180305.1_00014	blaOXA	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	274	274	100.00	96.35	274	WP_058951457.1	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-652	NF000417.2	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	CP043307.1	16507	17331
GCA_008180305.1	GCA_008180305.1_02084	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	96.98	76.10	385	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP043307.1	2093898	2095118
GCA_008180305.1	GCA_008180305.1_02759	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	282	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP043307.1	2797765	2798613
GCA_008180305.1	GCA_008180305.1_02763	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	404	404	100.00	100.00	404	WP_000214119.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP043307.1	2801116	2802330
GCA_008180305.1	GCA_008180305.1_02764	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP043307.1	2802766	2803602
GCA_008180305.1	GCA_008180305.1_02765	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	287	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP043307.1	2803602	2804465
GCA_008180305.1	GCA_008180305.1_03043	blaNDM-1	subclass B1 metallo-beta-lactamase NDM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	270	270	100.00	100.00	270	WP_004201164.1	subclass B1 metallo-beta-lactamase NDM-1	NF000259.2	NDM family subclass B1 metallo-beta-lactamase	CP043307.1	3091502	3092314
GCA_008180305.1	GCA_008180305.1_03360	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.25	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP043309.1	6994	7449
GCA_008180305.1	GCA_008180305.1_03361	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	94.83	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP043309.1	7521	7871
GCA_008180305.1	GCA_008180305.1_03362	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	84.62	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP043309.1	7885	8160
GCA_008180305.1	GCA_008180305.1_03363	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP043309.1	8188	8613
GCA_008180305.1	GCA_008180305.1_03364	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	544	561	100.00	88.95	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP043309.1	8652	10286
GCA_008180305.1	GCA_008180305.1_03365	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	208	212	92.92	62.44	197	AAA88369.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP043309.1	10326	10952
GCA_008180305.1	GCA_008180305.1_03366	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP043309.1	10993	11358
GCA_008180305.1	GCA_008180305.1_03367	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP043309.1	11355	11591
GCA_008180305.1	GCA_008180305.1_03383	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	421	421	100.00	88.60	421	WP_024160909.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP043309.1	28217	29482
GCA_008180305.1	GCA_008180305.1_03400	mph(E)	Mph(E) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EXACTP	294	294	100.00	100.00	294	WP_000155092.1	Mph(E) family macrolide 2-phosphotransferase	NF012158.1	Mph(E) family macrolide 2-phosphotransferase	CP043309.1	47669	48553
GCA_008180305.1	GCA_008180305.1_03401	msr(E)	ABC-F type ribosomal protection protein Msr(E)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN	EXACTP	491	491	100.00	100.00	491	WP_000052512.1	ABC-F type ribosomal protection protein Msr(E)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP043309.1	48609	50084
GCA_008180305.1	GCA_008180305.1_03415	blaOXA	OXA-58 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	257	280	91.79	100.00	257	WP_002002480.1	carbapenem-hydrolyzing class D beta-lactamase OXA-58	NF012161.0	class D beta-lactamase	CP043309.1	57613	58386
GCA_008180305.1	GCA_008180305.1_03587	blaNDM-1	subclass B1 metallo-beta-lactamase NDM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	270	270	100.00	100.00	270	WP_004201164.1	subclass B1 metallo-beta-lactamase NDM-1	NF000259.2	NDM family subclass B1 metallo-beta-lactamase	CP043309.1	250228	251040
GCA_008180305.1	GCA_008180305.1_03595	aph(3)-VIa	aminoglycoside O-phosphotransferase APH(3)-VIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	259	259	100.00	100.00	259	WP_000422636.1	aminoglycoside O-phosphotransferase APH(3)-VIa	NF033062.0	APH(3)-VI family aminoglycoside O-phosphotransferase	CP043309.1	256925	257704
GCA_000273445.1	GCA_000273445.1_00965	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AKVY01000001.1	920033	921232
GCA_901875335.1	GCA_901875335.1_00064	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CABFMA010000001.1	100120	102045
GCA_901875335.1	GCA_901875335.1_00071	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CABFMA010000001.1	108683	109648
GCA_901875335.1	GCA_901875335.1_02078	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CABFMA010000053.1	158082	159272
GCA_001434175.1	GCA_001434175.1_02570	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.44	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	AZEJ01000005.1	177009	179123
GCA_019375835.1	GCA_019375835.1_00800	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCO010000001.1	232047	233237
GCA_019375835.1	GCA_019375835.1_01855	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCO010000046.1	1289	2089
GCA_019375835.1	GCA_019375835.1_02004	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCO010000056.1	362	1327
GCA_003184405.1	GCA_003184405.1_00348	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	98.06	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP029621.1	299488	300882
GCA_037904585.1	GCA_037904585.1_00221	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP077129.1	220876	222795
GCA_029691815.1	GCA_029691815.1_01389	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121526.1	1414816	1415196
GCA_029691815.1	GCA_029691815.1_01390	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121526.1	1415186	1416943
GCA_029691815.1	GCA_029691815.1_01391	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121526.1	1417050	1417895
GCA_029691815.1	GCA_029691815.1_01986	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP121526.1	2011190	2011750
GCA_029691815.1	GCA_029691815.1_01990	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP121526.1	2013279	2014013
GCA_029691815.1	GCA_029691815.1_02070	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121525.1	107	487
GCA_029691815.1	GCA_029691815.1_02071	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121525.1	477	2234
GCA_029691815.1	GCA_029691815.1_02072	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121525.1	2341	3186
GCA_029691815.1	GCA_029691815.1_02076	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP121525.1	5342	5983
GCA_029691815.1	GCA_029691815.1_02080	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP121525.1	9948	10346
GCA_029691815.1	GCA_029691815.1_02081	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP121525.1	10569	11312
GCA_029691815.1	GCA_029691815.1_02094	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP121525.1	21707	23086
GCA_029691815.1	GCA_029691815.1_02203	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP121525.1	143425	145431
GCA_029691815.1	GCA_029691815.1_02204	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP121525.1	145531	146517
GCA_029691815.1	GCA_029691815.1_02224	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121525.1	163220	164509
GCA_029691815.1	GCA_029691815.1_02227	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP121525.1	166687	167034
GCA_029691815.1	GCA_029691815.1_02301	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP121525.1	256013	256441
GCA_003355315.1	GCA_003355315.1_00028	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP031324.1	27999	29237
GCA_003355315.1	GCA_003355315.1_00029	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	207	210	100.00	96.67	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP031324.1	29641	30264
GCA_003355315.1	GCA_003355315.1_00031	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP031324.1	31088	32656
GCA_003355315.1	GCA_003355315.1_00266	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.23	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP031324.1	298463	299989
GCA_003355315.1	GCA_003355315.1_01387	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP031324.1	1388127	1389506
GCA_003355315.1	GCA_003355315.1_02148	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP031324.1	2185032	2185937
GCA_001070575.1	GCA_001070575.1_01596	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVSS01000076.1	11214	12938
GCA_001070575.1	GCA_001070575.1_01597	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVSS01000076.1	12940	14676
GCA_001070575.1	GCA_001070575.1_01965	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JVSS01000088.1	12346	13809
GCA_001070575.1	GCA_001070575.1_01966	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JVSS01000088.1	13929	15146
GCA_008633005.1	GCA_008633005.1_00588	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	BHYN01000005.1	253029	254948
GCA_021764795.1	GCA_021764795.1_00307	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_002244796.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CP091469.1	300191	301396
GCA_021764795.1	GCA_021764795.1_01138	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.34	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP091469.1	1137161	1138555
GCA_003344065.1	GCA_003344065.1_00842	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	QHJX01000011.1	11014	12306
GCA_003344065.1	GCA_003344065.1_00846	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	QHJX01000011.1	15989	16336
GCA_003344065.1	GCA_003344065.1_02066	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	QHJX01000004.1	126643	127935
GCA_003344065.1	GCA_003344065.1_02683	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	QHJX01000009.1	16911	17396
GCA_003344065.1	GCA_003344065.1_02685	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	QHJX01000009.1	18400	19245
GCA_003344065.1	GCA_003344065.1_02686	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	QHJX01000009.1	19352	21109
GCA_003344065.1	GCA_003344065.1_02687	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	QHJX01000009.1	21099	21479
GCA_003344065.1	GCA_003344065.1_02690	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	QHJX01000009.1	23284	24750
GCA_015260605.1	GCA_015260605.1_01228	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZWH010000005.1	13489	14679
GCA_024792395.1	GCA_024792395.1_02019	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JANUNG010000001.1	2367626	2368831
GCA_024792395.1	GCA_024792395.1_02020	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	170	170	100.00	99.41	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JANUNG010000001.1	2368856	2369368
GCA_024792395.1	GCA_024792395.1_02449	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	300	296	100.00	64.53	296	WP_005827792.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JANUNG010000001.1	2856615	2857517
GCA_938015825.1	GCA_938015825.1_00771	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CALLVZ010000066.1	16757	17947
GCA_938015825.1	GCA_938015825.1_01540	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CALLVZ010000112.1	3837	4637
GCA_938015825.1	GCA_938015825.1_02095	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CALLVZ010000151.1	3238	5163
GCA_938015825.1	GCA_938015825.1_02307	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CALLVZ010000175.1	916	1881
GCA_938015825.1	GCA_938015825.1_02890	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CALLVZ010000214.1	2494	3294
GCA_000154465.1	GCA_000154465.1_01304	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	322	300	96.00	51.39	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	DS499577.1	71874	72842
GCA_030323545.1	GCA_030323545.1_01136	copP	copper-binding metallochaperone CopP	plus	STRESS	METAL	COPPER	COPPER	BLASTP	66	66	100.00	98.48	66	AAD05936.1	copper-binding metallochaperone CopP	NF033781.1	copper-binding metallochaperone CopP	CP122954.1	1177532	1177732
GCA_003989165.1	GCA_003989165.1_01350	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	RBME01000023.1	837	1688
GCA_003989165.1	GCA_003989165.1_01359	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.30	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RBME01000023.1	9570	10424
GCA_003989165.1	GCA_003989165.1_01384	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	RBME01000027.1	2831	4006
GCA_000277405.1	GCA_000277405.1_00432	copP	copper-binding metallochaperone CopP	plus	STRESS	METAL	COPPER	COPPER	BLASTP	66	66	100.00	93.94	66	AAD05936.1	copper-binding metallochaperone CopP	NF033781.1	copper-binding metallochaperone CopP	CP003474.1	433053	433253
GCA_002861125.1	GCA_002861125.1_00493	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	PKHC01000001.1	571121	572599
GCA_002861125.1	GCA_002861125.1_00661	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	PKHC01000001.1	796713	797930
GCA_002861125.1	GCA_002861125.1_00662	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	PKHC01000001.1	798050	799513
GCA_006757745.1	GCA_006757745.1_01017	blaOXA-103	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-103	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	273	273	100.00	100.00	273	WP_005025422.1	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-103	NF000266.2	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase	AP019740.1	1098268	1099089
GCA_006757745.1	GCA_006757745.1_01744	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	287	285	97.54	40.14	284	WP_063864745.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	AP019740.1	1843544	1844407
GCA_006757745.1	GCA_006757745.1_02000	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	397	97.98	77.38	389	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	AP019740.1	2092961	2094148
GCA_020550085.1	GCA_020550085.1_02788	cblA	CblA family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	296	296	100.00	96.28	296	WP_005827792.1	CblA family class A beta-lactamase	NF033098.1	CblA family class A beta-lactamase	CP085132.1	3277891	3278781
GCA_020550085.1	GCA_020550085.1_03250	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP085132.1	3785849	3787774
GCA_000511675.1	GCA_000511675.1_02438	ymoA	expression modulating protein YmoA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	67	67	100.00	100.00	67	AAQ90017.1	expression modulating protein YmoA	NA	NA	BAUR01000046.1	49546	49749
GCA_000511675.1	GCA_000511675.1_03444	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	164	102	100.00	53.28	122	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	BAUR01000016.1	2699	3193
GCA_000511675.1	GCA_000511675.1_03969	yfeA	iron/manganese ABC transporter substrate-binding protein YfeA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	322	322	100.00	100.00	322	AAC46147.1	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	BAUR01000004.1	58575	59543
GCA_000511675.1	GCA_000511675.1_03970	yfeB	iron/manganese ABC transporter ATP-binding protein YfeB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	296	296	100.00	100.00	296	AAC46148.1	iron/manganese ABC transporter ATP-binding protein YfeB	NA	NA	BAUR01000004.1	59540	60430
GCA_000511675.1	GCA_000511675.1_03972	yfeD	iron/manganese ABC transporter permease subunit YfeD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	297	100.00	99.66	297	AAC46150.1	iron/manganese ABC transporter permease subunit YfeD	NA	NA	BAUR01000004.1	61311	62204
GCA_000511675.1	GCA_000511675.1_04016	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	92	102	97.06	52.88	104	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	BAUR01000003.1	1830	2108
GCA_029925185.1	GCA_029925185.1_00096	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAREHM010000012.1	2713	3027
GCA_029925185.1	GCA_029925185.1_00097	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHM010000012.1	3027	4316
GCA_029925185.1	GCA_029925185.1_00098	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREHM010000012.1	4334	4735
GCA_029925185.1	GCA_029925185.1_01096	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHM010000002.1	317900	319192
GCA_001588955.1	GCA_001588955.1_01965	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LAWL01000008.1	171559	173199
GCA_000339415.1	GCA_000339415.1_00263	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	AHSN01000013.1	2285	3193
GCA_000339415.1	GCA_000339415.1_00265	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	AHSN01000013.1	3763	4557
GCA_000339415.1	GCA_000339415.1_01110	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691749.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AHSN01000036.1	5576	7495
GCA_000339415.1	GCA_000339415.1_01897	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	AHSN01000093.1	199	936
GCA_000724165.1	GCA_000724165.1_00682	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JPGW01000011.1	392694	393893
GCA_000724165.1	GCA_000724165.1_00833	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	JPGW01000012.1	33939	34979
GCA_000724165.1	GCA_000724165.1_01631	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JPGW01000013.1	427586	429244
GCA_003397685.1	GCA_003397685.1_00490	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	QJUZ01000001.1	612535	614013
GCA_015700075.1	GCA_015700075.1_00808	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JACSYR010000002.1	105161	106378
GCA_015700075.1	GCA_015700075.1_00809	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JACSYR010000002.1	106399	107862
GCA_015700075.1	GCA_015700075.1_00846	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JACSYR010000002.1	138728	140647
GCA_016939715.1	GCA_016939715.1_00024	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001206315.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	CP070569.1	25384	26172
GCA_016939715.1	GCA_016939715.1_00025	sat2	streptothricin N-acetyltransferase Sat2	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	174	174	100.00	100.00	174	WP_000704156.1	streptothricin N-acetyltransferase Sat2	NF000358.1	streptothricin N-acetyltransferase Sat2	CP070569.1	26230	26754
GCA_016939715.1	GCA_016939715.1_00026	dfrA1	trimethoprim-resistant dihydrofolate reductase DfrA1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	157	157	100.00	100.00	157	WP_000777554.1	trimethoprim-resistant dihydrofolate reductase DfrA1	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	CP070569.1	26849	27322
GCA_016939715.1	GCA_016939715.1_01502	catA	type A-4 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	217	217	100.00	96.77	217	WP_063843208.1	type A-4 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP070569.1	1575207	1575860
GCA_016939715.1	GCA_016939715.1_02518	blaCTX-M-14	extended-spectrum class A beta-lactamase CTX-M-14	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_001617865.1	extended-spectrum class A beta-lactamase CTX-M-14	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	CP070569.1	2625228	2626103
GCA_016939715.1	GCA_016939715.1_02714	blaCTX-M-14	extended-spectrum class A beta-lactamase CTX-M-14	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_001617865.1	extended-spectrum class A beta-lactamase CTX-M-14	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	CP070569.1	2803458	2804333
GCA_016939715.1	GCA_016939715.1_03285	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	92.19	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP070569.1	3439810	3440388
GCA_016939715.1	GCA_016939715.1_03289	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	194	194	100.00	100.00	194	AAD47284.1	tellurium resistance-associated protein TerZ	NA	NA	CP070569.1	3443133	3443717
GCA_016939715.1	GCA_016939715.1_03300	tet(J)	tetracycline efflux MFS transporter Tet(J)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	398	398	100.00	99.75	398	WP_004245621.1	tetracycline efflux MFS transporter Tet(J)	NF012194.0	tetracycline efflux MFS transporter Tet(J)	CP070569.1	3452963	3454159
GCA_016939715.1	GCA_016939715.1_03870	catA1	type A-1 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	219	219	100.00	100.00	219	WP_000412211.1	type A-1 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP070569.1	4063211	4063870
GCA_016939715.1	GCA_016939715.1_03877	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP070569.1	4068538	4069398
GCA_016939715.1	GCA_016939715.1_03879	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP070569.1	4070877	4071692
GCA_016939715.1	GCA_016939715.1_03883	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043265.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP070569.1	4074462	4075277
GCA_016939715.1	GCA_016939715.1_03884	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP070569.1	4075338	4076141
GCA_016939715.1	GCA_016939715.1_03885	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP070569.1	4076141	4076977
GCA_016939715.1	GCA_016939715.1_03890	aac(3)-IId	aminoglycoside N-acetyltransferase AAC(3)-IId	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	EXACTP	286	286	100.00	100.00	286	WP_000557454.1	aminoglycoside N-acetyltransferase AAC(3)-IId	NF033080.0	AAC(3)-II family aminoglycoside N-acetyltransferase	CP070569.1	4080045	4080905
GCA_016939715.1	GCA_016939715.1_03898	dfrA17	trimethoprim-resistant dihydrofolate reductase DfrA17	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	199	157	100.00	99.36	157	WP_001389366.1	trimethoprim-resistant dihydrofolate reductase DfrA17	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	CP070569.1	4090153	4090752
GCA_016939715.1	GCA_016939715.1_03900	aadA5	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA5	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_000503573.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA5	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP070569.1	4090883	4091671
GCA_016939715.1	GCA_016939715.1_03901	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP070569.1	4091877	4092224
GCA_016939715.1	GCA_016939715.1_03902	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP070569.1	4092218	4093057
GCA_016939715.1	GCA_016939715.1_03907	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	120	121	100.00	82.64	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP070569.1	4097340	4097702
GCA_016939715.1	GCA_016939715.1_03908	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	537	561	95.19	85.32	538	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP070569.1	4097720	4099333
GCA_016939715.1	GCA_016939715.1_03910	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	90.11	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP070569.1	4099924	4100199
GCA_016939715.1	GCA_016939715.1_03911	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	189	144	100.00	93.75	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP070569.1	4100500	4101069
GCA_016939715.1	GCA_016939715.1_04026	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP070570.1	39647	40507
GCA_016939715.1	GCA_016939715.1_04028	aac(6)-Ib	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	BLASTP	201	184	100.00	100.00	184	WP_063840280.1	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP070571.1	1219	1824
GCA_016939715.1	GCA_016939715.1_04032	blaKPC-2	carbapenem-hydrolyzing class A beta-lactamase KPC-2	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	293	293	100.00	100.00	293	WP_004199234.1	carbapenem-hydrolyzing class A beta-lactamase KPC-2	NF012141.1	KPC family carbapenem-hydrolyzing class A beta-lactamase	CP070571.1	4444	5325
GCA_016939715.1	GCA_016939715.1_04037	mph(A)	Mph(A) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	301	301	100.00	100.00	301	WP_000219391.1	Mph(A) family macrolide 2-phosphotransferase	NF000254.1	Mph(A) family macrolide 2-phosphotransferase	CP070571.1	12913	13818
GCA_016939715.1	GCA_016939715.1_04044	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP070571.1	20456	21295
GCA_016939715.1	GCA_016939715.1_04045	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP070571.1	21289	21636
GCA_016939715.1	GCA_016939715.1_04046	arr-3	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	EXACTP	150	150	100.00	100.00	150	WP_001749986.1	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP070571.1	21859	22311
GCA_016939715.1	GCA_016939715.1_04047	catB3	type B-3 chloramphenicol O-acetyltransferase CatB3	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	210	210	100.00	100.00	210	WP_000186237.1	type B-3 chloramphenicol O-acetyltransferase CatB3	NF000490.1	type B chloramphenicol O-acetyltransferase	CP070571.1	22396	23028
GCA_016939715.1	GCA_016939715.1_04048	blaOXA-1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	276	276	100.00	100.00	276	WP_001334766.1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NF000388.2	OXA-1 family class D beta-lactamase	CP070571.1	23166	23996
GCA_016939715.1	GCA_016939715.1_04049	aac(6)-Ib-cr	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr	core	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	BLASTP	199	184	100.00	100.00	184	WP_063840321.1	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr5	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP070571.1	24127	24726
GCA_022346125.1	GCA_022346125.1_02235	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.59	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDG010000007.1	125929	126783
GCA_025311535.1	GCA_025311535.1_00479	blaACT-17	cephalosporin-hydrolyzing class C beta-lactamase ACT-17	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	381	381	100.00	100.00	381	WP_017694683.1	cephalosporin-hydrolyzing class C beta-lactamase ACT-17	NF000385.4	ACT family cephalosporin-hydrolyzing class C beta-lactamase	CP104401.1	465697	466842
GCA_025311535.1	GCA_025311535.1_00652	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	95.74	141	WP_038415208.1	fosfomycin resistance glutathione transferase FosA	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	CP104401.1	647853	648278
GCA_025311535.1	GCA_025311535.1_01482	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	95.03	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	CP104401.1	1507731	1509905
GCA_025311535.1	GCA_025311535.1_01485	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	90.71	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP104401.1	1512321	1515980
GCA_025311535.1	GCA_025311535.1_01486	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.99	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP104401.1	1516122	1517237
GCA_025311535.1	GCA_025311535.1_01522	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	99.29	87.14	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP104401.1	1560722	1561153
GCA_025311535.1	GCA_025311535.1_02201	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	101	102	100.00	77.14	105	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP104401.1	2184893	2185198
GCA_025311535.1	GCA_025311535.1_02216	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	225	217	94.01	65.85	205	WP_063843208.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP104401.1	2200738	2201415
GCA_025311535.1	GCA_025311535.1_03314	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	100.00	96.38	1050	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP104401.1	3385207	3388359
GCA_025311535.1	GCA_025311535.1_03988	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP104401.1	4046792	4047595
GCA_025311535.1	GCA_025311535.1_03989	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP104401.1	4047595	4048431
GCA_025311535.1	GCA_025311535.1_04684	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	294	300	97.33	91.10	292	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	CP104401.1	4751684	4752568
GCA_025311535.1	GCA_025311535.1_04817	dfrA51	trimethoprim-resistant dihydrofolate reductase DfrA51	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	158	158	100.00	100.00	158	WP_000781812.1	trimethoprim-resistant dihydrofolate reductase DfrA51	NF047324.1	trimethoprim-resistant dihydrofolate reductase DfrA51	CP104402.1	13412	13888
GCA_003626215.1	GCA_003626215.1_01354	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHC01000004.1	101668	102609
GCA_902859035.1	GCA_902859035.1_00709	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	LR793270.1	682614	683831
GCA_902859035.1	GCA_902859035.1_00710	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	LR793270.1	683951	685414
GCA_005221285.1	GCA_005221285.1_01881	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP039886.1	1864460	1866028
GCA_902483375.1	GCA_902483375.1_01412	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABTCX010000007.1	23141	24781
GCA_003439105.1	GCA_003439105.1_01759	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	QSUT01000005.1	100051	101970
GCA_003439105.1	GCA_003439105.1_01770	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	QSUT01000005.1	111888	112625
GCA_000251565.2	GCA_000251565.2_01582	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AIKR01000002.1	431325	432524
GCA_000251565.2	GCA_000251565.2_01973	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AIKR01000001.1	163704	165167
GCA_000251565.2	GCA_000251565.2_01974	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AIKR01000001.1	165188	166405
GCA_009811895.1	GCA_009811895.1_04122	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	321	299	97.66	56.57	297	WP_038576754.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	BLJH01000021.1	32929	33894
GCA_009811895.1	GCA_009811895.1_04498	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	472	631	74.33	46.61	472	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BLJH01000026.1	18314	19732
GCA_001516345.1	GCA_001516345.1_00117	mexX	multidrug efflux RND transporter periplasmic adaptor subunit MexX	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	396	396	100.00	98.99	396	AAF14522.1	multidrug efflux RND transporter periplasmic adaptor subunit MexX	NA	NA	CP008861.1	114873	116063
GCA_001516345.1	GCA_001516345.1_00716	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	414	414	100.00	99.76	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP008861.1	816104	817348
GCA_001516345.1	GCA_001516345.1_02238	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	71.74	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP008861.1	2388544	2388822
GCA_001516345.1	GCA_001516345.1_02239	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	83.45	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP008861.1	2388833	2390521
GCA_001516345.1	GCA_001516345.1_02240	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	121	121	100.00	73.55	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP008861.1	2390539	2390904
GCA_001516345.1	GCA_001516345.1_02241	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	72	78	98.72	90.91	77	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP008861.1	2390901	2391119
GCA_001516345.1	GCA_001516345.1_02630	blaPDC-5	extended-spectrum class C beta-lactamase PDC-5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	397	397	100.00	100.00	397	WP_003119095.1	extended-spectrum class C beta-lactamase PDC-5	NF000422.6	PDC family class C beta-lactamase	CP008861.1	2796172	2797365
GCA_001516345.1	GCA_001516345.1_02639	aph(3)-IIb	aminoglycoside O-phosphotransferase APH(3)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	268	268	100.00	100.00	268	WP_003113011.1	aminoglycoside O-phosphotransferase APH(3)-IIb	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP008861.1	2809721	2810527
GCA_001516345.1	GCA_001516345.1_03072	mexA	multidrug efflux RND transporter periplasmic adaptor subunit MexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	383	383	100.00	100.00	383	AAA74436.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	NF033834.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	CP008861.1	3255579	3256730
GCA_001516345.1	GCA_001516345.1_03652	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	138	144	89.58	90.08	131	BAA20334.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP008861.1	3874448	3874864
GCA_001516345.1	GCA_001516345.1_03701	blaOXA-1014	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-1014	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	262	262	100.00	100.00	262	WP_049291121.1	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-1014	NF000432.2	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase	CP008861.1	3924322	3925110
GCA_001516345.1	GCA_001516345.1_05074	catB7	type B-4 chloramphenicol O-acetyltransferase CatB7	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	212	212	100.00	98.11	212	WP_003112709.1	type B-4 chloramphenicol O-acetyltransferase CatB7	NF000490.1	type B chloramphenicol O-acetyltransferase	CP008861.1	5420194	5420832
GCA_001516345.1	GCA_001516345.1_05635	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	135	135	100.00	100.00	135	WP_003082280.1	FosA family fosfomycin resistance glutathione transferase	NF000094.1	FosA family fosfomycin resistance glutathione transferase	CP008861.1	5982061	5982468
GCA_938017805.1	GCA_938017805.1_00192	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	576	593	94.60	32.93	577	WP_012705551.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	CALIIO010000032.1	1163	2893
GCA_027686705.1	GCA_027686705.1_00983	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQCSC010000002.1	216377	218296
GCA_027686705.1	GCA_027686705.1_00984	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQCSC010000002.1	219221	219958
GCA_007097675.1	GCA_007097675.1_02147	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	98.83	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	VKDJ01000005.1	155840	157381
GCA_016775375.1	GCA_016775375.1_00435	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	87.80	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAEUGG010000009.1	2514	3992
GCA_016775375.1	GCA_016775375.1_00786	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAEUGG010000018.1	82430	84349
GCA_018379175.1	GCA_018379175.1_00752	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAGZWA010000006.1	91640	93280
GCA_028527665.1	GCA_028527665.1_00011	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.78	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAQPSI010000001.1	7106	8548
GCA_028527665.1	GCA_028527665.1_00797	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQPSI010000002.1	731	1585
GCA_002966675.1	GCA_002966675.1_01334	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.98	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP020011.1	1332830	1334224
GCA_016889405.1	GCA_016889405.1_00357	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	43.90	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP069512.1	400375	400743
GCA_017655845.1	GCA_017655845.1_00518	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	44.80	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040420.1	497642	498016
GCA_017655845.1	GCA_017655845.1_00667	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	246	244	99.59	87.35	245	WP_011117197.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP040420.1	658111	658851
GCA_017655845.1	GCA_017655845.1_01374	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP040420.1	1421508	1421912
GCA_017655845.1	GCA_017655845.1_01375	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP040420.1	1422129	1422872
GCA_023109235.1	GCA_023109235.1_00496	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDUC010000001.1	69279	70742
GCA_023109235.1	GCA_023109235.1_00497	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDUC010000001.1	70763	71980
GCA_023109235.1	GCA_023109235.1_01727	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.74	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JALDUC010000008.1	74795	75994
GCA_001714705.1	GCA_001714705.1_01755	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.85	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP016954.1	1894162	1894572
GCA_001714705.1	GCA_001714705.1_02361	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP016954.1	2533601	2534002
GCA_000360565.1	GCA_000360565.1_00032	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KB821141.1	38285	39577
GCA_000360565.1	GCA_000360565.1_00070	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	KB821141.1	69833	70555
GCA_000360565.1	GCA_000360565.1_00071	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	KB821141.1	70680	71387
GCA_000360565.1	GCA_000360565.1_00077	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	KB821141.1	76503	77438
GCA_000360565.1	GCA_000360565.1_00085	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	KB821141.1	83640	84395
GCA_000360565.1	GCA_000360565.1_00086	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	KB821141.1	84434	84829
GCA_000360565.1	GCA_000360565.1_00088	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	KB821141.1	85359	86087
GCA_000360565.1	GCA_000360565.1_00089	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	KB821141.1	86122	86841
GCA_000360565.1	GCA_000360565.1_00090	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	KB821141.1	87122	87886
GCA_000360565.1	GCA_000360565.1_00246	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	KB821141.1	212723	213073
GCA_000360565.1	GCA_000360565.1_00251	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	KB821141.1	215287	215778
GCA_000360565.1	GCA_000360565.1_00324	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	KB821141.1	267988	268122
GCA_000360565.1	GCA_000360565.1_00469	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	KB821141.1	419842	421284
GCA_000360565.1	GCA_000360565.1_00642	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	KB821141.1	571687	572106
GCA_000360565.1	GCA_000360565.1_00726	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	186	309	54.69	100.00	169	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	KB821141.1	660482	661042
GCA_000360565.1	GCA_000360565.1_00728	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	KB821141.1	662013	662960
GCA_000360565.1	GCA_000360565.1_00729	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	KB821141.1	662962	663939
GCA_000360565.1	GCA_000360565.1_00953	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	KB821141.1	900710	902239
GCA_000360565.1	GCA_000360565.1_00987	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KB821141.1	945569	946621
GCA_000360565.1	GCA_000360565.1_01066	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	KB821141.1	1027720	1028124
GCA_000360565.1	GCA_000360565.1_01067	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	KB821141.1	1028341	1029084
GCA_000360565.1	GCA_000360565.1_01070	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	KB821141.1	1030990	1032996
GCA_000360565.1	GCA_000360565.1_01071	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	KB821141.1	1033096	1034853
GCA_000360565.1	GCA_000360565.1_01072	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	KB821141.1	1034853	1035224
GCA_000360565.1	GCA_000360565.1_01081	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	KB821141.1	1041936	1042667
GCA_000360565.1	GCA_000360565.1_01082	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	KB821141.1	1042793	1043575
GCA_000360565.1	GCA_000360565.1_01163	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	KB821141.1	1136903	1138261
GCA_000360565.1	GCA_000360565.1_01360	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	KB821141.1	1365588	1366943
GCA_000360565.1	GCA_000360565.1_01397	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	KB821141.1	1400251	1400862
GCA_000360565.1	GCA_000360565.1_02759	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	KB821141.1	2757035	2757766
GCA_000360565.1	GCA_000360565.1_02760	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	KB821141.1	2757892	2758674
GCA_000360565.1	GCA_000360565.1_02859	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	KB821142.1	5249	5866
GCA_000360565.1	GCA_000360565.1_02870	sed	staphylococcal enterotoxin type D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	258	258	100.00	99.61	258	AAB06195.1	staphylococcal enterotoxin type D	NA	NA	KB821142.1	16179	16955
GCA_000360565.1	GCA_000360565.1_02873	sej	staphylococcal enterotoxin type J	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	268	268	100.00	100.00	268	AAC78590.1	staphylococcal enterotoxin type J	NA	NA	KB821142.1	17850	18656
GCA_000360565.1	GCA_000360565.1_02874	ser	staphylococcal enterotoxin type R	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	259	259	100.00	99.61	259	EVY93839.1	staphylococcal enterotoxin type R	NA	NA	KB821142.1	18746	19525
GCA_000360565.1	GCA_000360565.1_02880	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	KB821142.1	23519	23899
GCA_000360565.1	GCA_000360565.1_02881	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	KB821142.1	23889	25646
GCA_000360565.1	GCA_000360565.1_02882	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	KB821142.1	25753	26598
GCA_009379265.1	GCA_009379265.1_00495	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXDG01000015.1	101554	102495
GCA_000210895.1	GCA_000210895.1_01203	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089068.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	FQ312002.1	1166619	1167824
GCA_002096215.1	GCA_002096215.1_01517	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	94.61	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NCUC01000012.1	115288	117183
GCA_002096215.1	GCA_002096215.1_01668	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	NCUC01000009.1	54567	54995
GCA_900637475.1	GCA_900637475.1_01032	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	164	102	100.00	53.28	122	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	LR134373.1	1180064	1180558
GCA_900637475.1	GCA_900637475.1_01718	yfeD	iron/manganese ABC transporter permease subunit YfeD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	297	100.00	99.66	297	AAC46150.1	iron/manganese ABC transporter permease subunit YfeD	NA	NA	LR134373.1	1890871	1891764
GCA_900637475.1	GCA_900637475.1_01720	yfeB	iron/manganese ABC transporter ATP-binding protein YfeB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	296	296	100.00	100.00	296	AAC46148.1	iron/manganese ABC transporter ATP-binding protein YfeB	NA	NA	LR134373.1	1892645	1893535
GCA_900637475.1	GCA_900637475.1_01721	yfeA	iron/manganese ABC transporter substrate-binding protein YfeA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	322	322	100.00	100.00	322	AAC46147.1	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	LR134373.1	1893532	1894500
GCA_900637475.1	GCA_900637475.1_01846	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	92	102	97.06	52.88	104	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	LR134373.1	2021129	2021407
GCA_900637475.1	GCA_900637475.1_03142	ymoA	expression modulating protein YmoA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	67	67	100.00	100.00	67	AAQ90017.1	expression modulating protein YmoA	NA	NA	LR134373.1	3375787	3375990
GCA_009717845.1	GCA_009717845.1_00360	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMZI01000001.1	331045	331473
GCA_009717845.1	GCA_009717845.1_00528	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMZI01000001.1	490112	491329
GCA_009717845.1	GCA_009717845.1_00529	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMZI01000001.1	491449	492912
GCA_009717845.1	GCA_009717845.1_00858	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMZI01000002.1	53658	55394
GCA_009717845.1	GCA_009717845.1_00859	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMZI01000002.1	55396	57120
GCA_001807045.1	GCA_001807045.1_00403	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV787182.1	199831	200685
GCA_001807045.1	GCA_001807045.1_00407	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV787182.1	202407	203831
GCA_001807045.1	GCA_001807045.1_02181	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV787198.1	395	2314
GCA_001073365.1	GCA_001073365.1_00113	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JVCA01000002.1	10254	10676
GCA_001073365.1	GCA_001073365.1_00143	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JVCA01000003.1	8285	8902
GCA_001073365.1	GCA_001073365.1_00147	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JVCA01000003.1	11056	11436
GCA_001073365.1	GCA_001073365.1_00148	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JVCA01000003.1	11426	13183
GCA_001073365.1	GCA_001073365.1_00149	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JVCA01000003.1	13290	14135
GCA_001073365.1	GCA_001073365.1_00343	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JVCA01000006.1	149276	150565
GCA_001073365.1	GCA_001073365.1_00348	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JVCA01000006.1	152731	153078
GCA_001073365.1	GCA_001073365.1_00396	qacG	quaternary ammonium compound efflux SMR transporter QacG	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	98.13	107	WP_015740450.1	quaternary ammonium compound efflux SMR transporter QacG	NF000277.1	quaternary ammonium compound efflux SMR transporter QacG	JVCA01000008.1	168	491
GCA_001073365.1	GCA_001073365.1_00432	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JVCA01000012.1	22575	23648
GCA_001073365.1	GCA_001073365.1_00893	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JVCA01000021.1	11648	12937
GCA_001073365.1	GCA_001073365.1_01205	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JVCA01000023.1	3739	5205
GCA_001073365.1	GCA_001073365.1_01209	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JVCA01000024.1	1199	1684
GCA_001073365.1	GCA_001073365.1_01214	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_000700648.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JVCA01000026.1	2350	2835
GCA_000418345.1	GCA_000418345.1_00047	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	PARTIALP	130	260	50.00	99.23	130	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NA	NA	CP005288.1	48277	48669
GCA_000418345.1	GCA_000418345.1_00048	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP005288.1	48795	49526
GCA_000418345.1	GCA_000418345.1_00062	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP005288.1	62083	62421
GCA_000418345.1	GCA_000418345.1_00063	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP005288.1	62479	64122
GCA_000418345.1	GCA_000418345.1_00064	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.15	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP005288.1	64204	64854
GCA_000418345.1	GCA_000418345.1_00070	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.70	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP005288.1	68945	70951
GCA_000418345.1	GCA_000418345.1_00071	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP005288.1	71051	72808
GCA_000418345.1	GCA_000418345.1_00072	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	67	123	54.47	100.00	67	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NA	NA	CP005288.1	72808	73011
GCA_000418345.1	GCA_000418345.1_00147	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	99.78	450	WP_001100289.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP005288.1	154326	155684
GCA_000418345.1	GCA_000418345.1_00346	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP005288.1	382918	384273
GCA_000418345.1	GCA_000418345.1_00374	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP005288.1	407174	407968
GCA_000418345.1	GCA_000418345.1_00375	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	176	180	100.00	97.78	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP005288.1	408061	408591
GCA_000418345.1	GCA_000418345.1_00376	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP005288.1	408588	409496
GCA_000418345.1	GCA_000418345.1_00402	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP005288.1	432578	433189
GCA_000418345.1	GCA_000418345.1_00429	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	CP005288.1	455792	456832
GCA_000418345.1	GCA_000418345.1_01776	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP005288.1	1784930	1785682
GCA_000418345.1	GCA_000418345.1_01830	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP005288.1	1838612	1839343
GCA_000418345.1	GCA_000418345.1_01831	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	PARTIALP	130	260	50.00	99.23	130	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NA	NA	CP005288.1	1839469	1839861
GCA_000418345.1	GCA_000418345.1_01958	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP005288.1	1985508	1986800
GCA_000418345.1	GCA_000418345.1_02002	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP005288.1	2024782	2025498
GCA_000418345.1	GCA_000418345.1_02005	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP005288.1	2027273	2027995
GCA_000418345.1	GCA_000418345.1_02006	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP005288.1	2028120	2028827
GCA_000418345.1	GCA_000418345.1_02016	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP005288.1	2039225	2040208
GCA_000418345.1	GCA_000418345.1_02017	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP005288.1	2040210	2041145
GCA_000418345.1	GCA_000418345.1_02178	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP005288.1	2169624	2169974
GCA_000418345.1	GCA_000418345.1_02183	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP005288.1	2172185	2172676
GCA_000418345.1	GCA_000418345.1_02265	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP005288.1	2229521	2229655
GCA_000418345.1	GCA_000418345.1_02299	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP005288.1	2265687	2267126
GCA_000418345.1	GCA_000418345.1_02416	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP005288.1	2386396	2387838
GCA_000418345.1	GCA_000418345.1_02592	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP005288.1	2541436	2541855
GCA_000418345.1	GCA_000418345.1_02679	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP005288.1	2631097	2632062
GCA_000418345.1	GCA_000418345.1_02681	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP005288.1	2633962	2634909
GCA_000418345.1	GCA_000418345.1_02682	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP005288.1	2634911	2635888
GCA_000418345.1	GCA_000418345.1_02852	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP005288.1	2815644	2816024
GCA_000418345.1	GCA_000418345.1_02853	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP005288.1	2816014	2817771
GCA_000418345.1	GCA_000418345.1_02854	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP005288.1	2817878	2818723
GCA_000418345.1	GCA_000418345.1_02922	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP005288.1	2889564	2891093
GCA_000418345.1	GCA_000418345.1_02957	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	294	350	81.71	98.95	286	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP005288.1	2933422	2934306
GCA_000418345.1	GCA_000418345.1_03007	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	PARTIALP	160	216	74.07	99.38	160	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NA	NA	CP005289.1	106	588
GCA_007990385.1	GCA_007990385.1_01696	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.09	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AP019834.1	1836361	1837839
GCA_900638555.1	GCA_900638555.1_00021	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.21	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	LR134525.1	20663	22189
GCA_900638555.1	GCA_900638555.1_00217	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	LR134525.1	222209	223777
GCA_900638555.1	GCA_900638555.1_00219	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	LR134525.1	224602	225234
GCA_900638555.1	GCA_900638555.1_00220	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.57	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	LR134525.1	225638	226876
GCA_900638555.1	GCA_900638555.1_00398	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	LR134525.1	398575	399480
GCA_900638555.1	GCA_900638555.1_01138	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	LR134525.1	1148443	1149822
GCA_029691725.1	GCA_029691725.1_00108	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.22	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121477.1	100092	100937
GCA_029691725.1	GCA_029691725.1_00109	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121477.1	101044	102801
GCA_029691725.1	GCA_029691725.1_00110	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121477.1	102791	103171
GCA_029691725.1	GCA_029691725.1_01116	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP121477.1	1171871	1172512
GCA_029691725.1	GCA_029691725.1_01368	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121477.1	1420447	1421739
GCA_029691725.1	GCA_029691725.1_01677	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121477.1	1762278	1763567
GCA_029691725.1	GCA_029691725.1_01680	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP121477.1	1765745	1766092
GCA_029691725.1	GCA_029691725.1_01743	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP121477.1	1835071	1835499
GCA_000245815.1	GCA_000245815.1_00044	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JH601103.1	50594	50968
GCA_000245815.1	GCA_000245815.1_00403	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	547	631	87.64	90.42	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JH601103.1	421249	422892
GCA_009378725.1	GCA_009378725.1_01587	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCQ01000008.1	54906	55847
GCA_019375745.1	GCA_019375745.1_00061	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCM010000010.1	80039	81229
GCA_019375745.1	GCA_019375745.1_01759	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCM010000042.1	14704	15669
GCA_019375745.1	GCA_019375745.1_02101	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCM010000058.1	1844	2644
GCA_000222765.2	GCA_000222765.2_00964	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	99.71	346	WP_063856112.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	AFUE01000006.1	83293	84333
GCA_016766735.1	GCA_016766735.1_00813	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP068549.1	875304	875714
GCA_003231475.1	GCA_003231475.1_01059	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.39	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	NSIW01000019.1	329474	330952
GCA_003231475.1	GCA_003231475.1_01073	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	NSIW01000019.1	344068	345987
GCA_003231475.1	GCA_003231475.1_01522	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	NSIW01000003.1	53679	54107
GCA_003231475.1	GCA_003231475.1_01527	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	NSIW01000003.1	55848	57311
GCA_003231475.1	GCA_003231475.1_01528	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	NSIW01000003.1	57431	58648
GCA_946998075.1	GCA_946998075.1_00772	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAMPWI010000007.1	71226	72866
GCA_001296205.1	GCA_001296205.1_01892	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP012718.1	1885084	1887003
GCA_902373575.1	GCA_902373575.1_00595	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CABKMY010000005.1	91357	91785
GCA_902373575.1	GCA_902373575.1_00596	catA16	type A-16 chloramphenicol O-acetyltransferase CatQ	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	219	219	100.00	98.63	219	WP_063843221.1	type A-16 chloramphenicol O-acetyltransferase CatQ	NF000491.1	type A chloramphenicol O-acetyltransferase	CABKMY010000005.1	92516	93175
GCA_902373575.1	GCA_902373575.1_00600	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CABKMY010000005.1	95270	96733
GCA_902373575.1	GCA_902373575.1_00601	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CABKMY010000005.1	96853	98070
GCA_902373575.1	GCA_902373575.1_00644	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABKMY010000006.1	46847	48766
GCA_902373575.1	GCA_902373575.1_00766	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	91.85	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CABKMY010000008.1	18493	20229
GCA_902373575.1	GCA_902373575.1_00767	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.29	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CABKMY010000008.1	20231	21955
GCA_902373575.1	GCA_902373575.1_01332	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CABKMY010000019.1	39061	39969
GCA_030408415.1	GCA_030408415.1_00470	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.54	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP046976.1	452233	453087
GCA_030408415.1	GCA_030408415.1_00844	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP046976.1	814020	815441
GCA_002073435.2	GCA_002073435.2_01808	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP020450.2	1818642	1820105
GCA_002073435.2	GCA_002073435.2_01809	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP020450.2	1820225	1821442
GCA_001807315.1	GCA_001807315.1_00476	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	KV788527.1	92900	94441
GCA_001807315.1	GCA_001807315.1_00483	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011152925.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV788528.1	3376	4230
GCA_001073635.1	GCA_001073635.1_01073	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JUZI01000018.1	1577	3496
GCA_014265025.1	GCA_014265025.1_00131	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMXX010000013.1	16606	18150
GCA_014265025.1	GCA_014265025.1_00132	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMXX010000013.1	18334	18894
GCA_014265025.1	GCA_014265025.1_00202	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMXX010000017.1	7103	7450
GCA_014265025.1	GCA_014265025.1_00206	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXX010000017.1	11133	12425
GCA_014265025.1	GCA_014265025.1_00211	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMXX010000018.1	5352	5723
GCA_014265025.1	GCA_014265025.1_00212	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMXX010000018.1	5723	7480
GCA_014265025.1	GCA_014265025.1_00213	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMXX010000018.1	7580	9586
GCA_014265025.1	GCA_014265025.1_00226	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMXX010000020.1	2463	2867
GCA_014265025.1	GCA_014265025.1_00227	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMXX010000020.1	3084	3827
GCA_014265025.1	GCA_014265025.1_00231	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMXX010000022.1	1475	2209
GCA_014265025.1	GCA_014265025.1_00910	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMXX010000005.1	38825	40465
GCA_014265025.1	GCA_014265025.1_00995	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXX010000006.1	41990	43282
GCA_014265025.1	GCA_014265025.1_01054	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMXX010000007.1	10298	10678
GCA_014265025.1	GCA_014265025.1_01055	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMXX010000007.1	10668	12425
GCA_014265025.1	GCA_014265025.1_01056	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMXX010000007.1	12532	13377
GCA_022212925.1	GCA_022212925.1_00868	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002364936.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP091895.1	870142	872061
GCA_022212925.1	GCA_022212925.1_01514	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP091895.1	1520705	1521442
GCA_022212925.1	GCA_022212925.1_02310	lsa(A)	ABC-F type ribosomal protection protein Lsa(A)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	498	498	100.00	99.40	498	WP_002365053.1	ABC-F type ribosomal protection protein Lsa(A)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP091895.1	2352767	2354263
GCA_001071295.1	GCA_001071295.1_00637	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVCZ01000015.1	28919	30643
GCA_001071295.1	GCA_001071295.1_00638	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.97	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVCZ01000015.1	30645	32381
GCA_001071295.1	GCA_001071295.1_00914	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.75	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JVCZ01000025.1	3274	5193
GCA_001071295.1	GCA_001071295.1_00925	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JVCZ01000025.1	15111	15848
GCA_001071295.1	GCA_001071295.1_01190	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.29	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JVCZ01000026.1	125195	126673
GCA_001071295.1	GCA_001071295.1_01233	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JVCZ01000027.1	20054	20482
GCA_001071295.1	GCA_001071295.1_01592	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JVCZ01000028.1	195940	197157
GCA_001071295.1	GCA_001071295.1_01593	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JVCZ01000028.1	197277	198740
GCA_001055095.1	GCA_001055095.1_00032	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	75.72	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVHG01000006.1	34282	35922
GCA_019329665.1	GCA_019329665.1_00090	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073857.1	89816	91822
GCA_019329665.1	GCA_019329665.1_00091	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073857.1	91922	93679
GCA_019329665.1	GCA_019329665.1_00092	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073857.1	93679	94050
GCA_019329665.1	GCA_019329665.1_00138	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073857.1	133016	133354
GCA_019329665.1	GCA_019329665.1_00139	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073857.1	133412	135055
GCA_019329665.1	GCA_019329665.1_00140	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073857.1	135137	135787
GCA_019329665.1	GCA_019329665.1_00150	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073857.1	144573	145871
GCA_019329665.1	GCA_019329665.1_00153	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073857.1	148040	148387
GCA_019329665.1	GCA_019329665.1_00230	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073857.1	231027	231263
GCA_019329665.1	GCA_019329665.1_00281	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073857.1	289061	290128
GCA_019329665.1	GCA_019329665.1_01768	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073857.1	1805208	1805588
GCA_019329665.1	GCA_019329665.1_01769	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073857.1	1805578	1807335
GCA_019329665.1	GCA_019329665.1_01770	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073857.1	1807442	1808287
GCA_019329665.1	GCA_019329665.1_01791	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073857.1	1827107	1827748
GCA_019329665.1	GCA_019329665.1_01912	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073857.1	1903376	1904815
GCA_019329665.1	GCA_019329665.1_01915	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073857.1	1906571	1907056
GCA_019329665.1	GCA_019329665.1_02878	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073858.1	414	1958
GCA_001411495.1	GCA_001411495.1_01534	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	397	396	98.48	87.95	390	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP012981.1	1620257	1621450
GCA_001411495.1	GCA_001411495.1_01894	norM	multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	462	462	99.78	92.19	461	AAG27731.1	multidrug efflux MATE transporter NorM	NA	NA	CP012981.1	2004599	2005987
GCA_001411495.1	GCA_001411495.1_04000	ant(3)	ANT(3)-I family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	HMM	270	262	99.62	63.98	261	WP_071846244.1	ANT(3)-I family aminoglycoside nucleotidyltransferase	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP012982.1	438376	439188
GCA_001411495.1	GCA_001411495.1_04332	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	410	395	99.24	63.01	392	WP_031633255.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP012982.1	802054	803286
GCA_001411495.1	GCA_001411495.1_04599	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	84.62	52.07	121	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP012982.1	1104183	1104578
GCA_001411495.1	GCA_001411495.1_05441	blaOXA	OXA-1043 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	100.00	84.76	269	WP_077021671.1	OXA-1043 family class D beta-lactamase	NF040600.1	OXA-1043 family class D beta-lactamase	CP012982.1	2047789	2048598
GCA_001411495.1	GCA_001411495.1_05830	blaPEN-bcc	PEN family class A beta-lactamase, Bcc-type	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	312	312	100.00	100.00	312	WP_027789588.1	PEN family class A beta-lactamase, Bcc-type	NF000320.3	PEN family class A beta-lactamase, Bcc-type	CP012982.1	2480063	2481001
GCA_001411495.1	GCA_001411495.1_06208	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	99.67	55.15	301	WP_105807557.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP012982.1	2876870	2877769
GCA_001411495.1	GCA_001411495.1_06971	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	389	408	92.16	56.76	377	WP_322881141.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP012983.1	333942	335111
GCA_925282535.1	GCA_925282535.1_01446	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.59	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CAKMAW010000020.1	27476	29590
GCA_925282535.1	GCA_925282535.1_02095	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	360	360	99.72	99.44	359	KAA9473339.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CAKMAW010000045.1	8039	9121
GCA_925282535.1	GCA_925282535.1_02096	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	330	352	93.75	98.48	330	KAF1296202.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CAKMAW010000045.1	9131	10123
GCA_925282535.1	GCA_925282535.1_02097	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	107	107	100.00	99.07	107	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAKMAW010000045.1	10227	10550
GCA_925282535.1	GCA_925282535.1_02098	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	586	575	100.00	99.83	575	KAA9473341.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CAKMAW010000045.1	10624	12384
GCA_925282535.1	GCA_925282535.1_02099	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	121	99.17	99.17	120	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAKMAW010000045.1	12365	12727
GCA_925282535.1	GCA_925282535.1_02100	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	116	116	100.00	99.14	116	KAA9473343.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CAKMAW010000045.1	12705	13055
GCA_925282535.1	GCA_925282535.1_02101	cadC	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	119	119	100.00	99.16	119	BCA86950.1	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CAKMAW010000045.1	13316	13675
GCA_925282535.1	GCA_925282535.1_02102	cadA	cadmium-translocating P-type ATPase CadA	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	705	705	100.00	99.01	705	BCA86951.1	cadmium-translocating P-type ATPase CadA	NA	NA	CAKMAW010000045.1	13672	15789
GCA_925282535.1	GCA_925282535.1_02150	tcrB	copper-translocating P-type ATPase TcrB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	700	710	100.00	96.90	710	AAL05407.1	copper-translocating P-type ATPase TcrB	NA	NA	CAKMAW010000049.1	704	2806
GCA_001544155.1	GCA_001544155.1_00628	blaOXA	OXA-22 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	275	274	99.64	96.70	273	WP_063861776.1	benzylpenicillin-hydrolyzing class D beta-lactamase OXA-22	NF033509.1	OXA-22 family class D beta-lactamase	BCPW01000002.1	73569	74396
GCA_001544155.1	GCA_001544155.1_01071	blaOXA	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	271	271	100.00	98.15	271	WP_063864500.1	carbapenem-hydrolyzing class D beta-lactamase OXA-60	NF000395.3	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	BCPW01000003.1	73606	74421
GCA_001544155.1	GCA_001544155.1_04372	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	BCPW01000039.1	34	468
GCA_001544155.1	GCA_001544155.1_04373	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	BCPW01000039.1	540	890
GCA_001544155.1	GCA_001544155.1_04374	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	BCPW01000039.1	903	1178
GCA_001544155.1	GCA_001544155.1_04375	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BCPW01000039.1	1250	2935
GCA_001544155.1	GCA_001544155.1_04376	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	BCPW01000039.1	2953	3318
GCA_001544155.1	GCA_001544155.1_04377	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	BCPW01000039.1	3315	3551
GCA_001471515.2	GCA_001471515.2_00560	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	LOSE02000001.1	518141	518638
GCA_001471515.2	GCA_001471515.2_01427	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	LOSE02000001.1	1372208	1373647
GCA_001471515.2	GCA_001471515.2_01431	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	LOSE02000001.1	1377206	1378672
GCA_001471515.2	GCA_001471515.2_01432	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	LOSE02000001.1	1378771	1379670
GCA_001471515.2	GCA_001471515.2_01697	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LOSE02000001.1	1639960	1640340
GCA_001471515.2	GCA_001471515.2_01698	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LOSE02000001.1	1640330	1642087
GCA_001471515.2	GCA_001471515.2_01699	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LOSE02000001.1	1642194	1643039
GCA_001471515.2	GCA_001471515.2_01701	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	LOSE02000001.1	1644283	1644606
GCA_001471515.2	GCA_001471515.2_01706	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	LOSE02000001.1	1648232	1648774
GCA_001471515.2	GCA_001471515.2_01707	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	LOSE02000001.1	1648867	1649661
GCA_001471515.2	GCA_001471515.2_01840	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LOSE02000001.1	1778711	1780717
GCA_001471515.2	GCA_001471515.2_01855	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	LOSE02000001.1	1792700	1794079
GCA_001471515.2	GCA_001471515.2_01889	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	LOSE02000001.1	1820349	1820750
GCA_001471515.2	GCA_001471515.2_01890	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LOSE02000001.1	1820768	1822057
GCA_001471515.2	GCA_001471515.2_01896	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	LOSE02000001.1	1828858	1829250
GCA_001471515.2	GCA_001471515.2_01897	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LOSE02000001.1	1829268	1830560
GCA_001471515.2	GCA_001471515.2_01981	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LOSE02000001.1	1906652	1907944
GCA_001471515.2	GCA_001471515.2_02763	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	1024	1024	100.00	99.80	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	LOSE02000002.1	10632	13706
GCA_001471515.2	GCA_001471515.2_02778	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	LOSE02000002.1	28431	28991
GCA_001471515.2	GCA_001471515.2_02779	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	LOSE02000002.1	29176	30720
GCA_001811455.1	GCA_001811455.1_00472	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV804806.1	368	2287
GCA_001811455.1	GCA_001811455.1_01100	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV804814.1	246332	247186
GCA_001811455.1	GCA_001811455.1_01891	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	94.45	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV804818.1	19217	21112
GCA_025909295.1	GCA_025909295.1_00162	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAPAIM010000012.1	7473	8690
GCA_025909295.1	GCA_025909295.1_00163	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.59	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAPAIM010000012.1	8810	10273
GCA_025909295.1	GCA_025909295.1_01375	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	454	458	97.82	99.55	448	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	JAPAIM010000003.1	111782	113146
GCA_025909295.1	GCA_025909295.1_01376	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_024052575.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAPAIM010000003.1	113604	115523
GCA_025909295.1	GCA_025909295.1_01665	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAPAIM010000005.1	117417	119057
GCA_001697765.1	GCA_001697765.1_00998	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016667.1	1022728	1024254
GCA_001697765.1	GCA_001697765.1_01198	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016667.1	1234702	1236270
GCA_001697765.1	GCA_001697765.1_01200	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016667.1	1237095	1237727
GCA_001697765.1	GCA_001697765.1_01201	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016667.1	1238135	1239373
GCA_001697765.1	GCA_001697765.1_01327	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016667.1	1374930	1375835
GCA_001697765.1	GCA_001697765.1_02038	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016667.1	2117444	2118823
GCA_000373705.1	GCA_000373705.1_00784	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	KB892217.1	39055	40245
GCA_024758285.1	GCA_024758285.1_01910	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	310	321	96.57	99.68	310	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103071.1	2061550	2062482
GCA_024758285.1	GCA_024758285.1_02173	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103071.1	2405882	2407807
GCA_024758285.1	GCA_024758285.1_02970	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	628	641	97.82	100.00	627	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103071.1	3203456	3205342
GCA_024758285.1	GCA_024758285.1_02981	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_063844771.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP103071.1	3221180	3221980
GCA_024758285.1	GCA_024758285.1_02982	tet(X1)	tetracycline-inactivating monooxygenase Tet(X1)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	379	379	100.00	99.74	379	WP_204376222.1	tetracycline-inactivating monooxygenase Tet(X1)	NA	NA	CP103071.1	3222287	3223426
GCA_024758285.1	GCA_024758285.1_02983	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	378	388	97.42	100.00	378	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	CP103071.1	3223625	3224761
GCA_024758285.1	GCA_024758285.1_02984	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	263	287	91.29	100.00	262	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	CP103071.1	3224937	3225728
GCA_024758285.1	GCA_024758285.1_04233	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103071.1	4504838	4505803
GCA_024758285.1	GCA_024758285.1_04429	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	310	321	96.57	99.68	310	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103071.1	4681978	4682910
GCA_024758285.1	GCA_024758285.1_04725	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.10	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103071.1	4988419	4989750
GCA_024758285.1	GCA_024758285.1_06364	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	310	321	96.57	99.68	310	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103071.1	6636921	6637853
GCA_024758285.1	GCA_024758285.1_06410	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	310	321	95.64	84.69	307	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103071.1	6690898	6691830
GCA_022689545.1	GCA_022689545.1_00542	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXC010000018.1	5013	5432
GCA_022689545.1	GCA_022689545.1_00826	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.54	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXC010000001.1	205179	206471
GCA_022689545.1	GCA_022689545.1_01880	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXC010000005.1	18759	19832
GCA_005696555.1	GCA_005696555.1_02393	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040005.1	2808705	2809127
GCA_000160495.1	GCA_000160495.1_00001	tet(C)	tetracycline efflux MFS transporter Tet(C)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	396	396	100.00	100.00	396	WP_001297013.1	tetracycline efflux MFS transporter Tet(C)	NF012191.0	tetracycline efflux MFS transporter Tet(C)	GG698600.1	975	2165
GCA_001074805.1	GCA_001074805.1_00374	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JUPI01000008.1	22863	23291
GCA_001074805.1	GCA_001074805.1_01851	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.45	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JUPI01000018.1	9100	10836
GCA_001074805.1	GCA_001074805.1_01852	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	96.52	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JUPI01000018.1	10838	12562
GCA_000213955.1	GCA_000213955.1_00772	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP002725.1	942134	943612
GCA_016727585.1	GCA_016727585.1_00019	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	98.31	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP068143.1	17853	21404
GCA_016727585.1	GCA_016727585.1_00042	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP068143.1	42884	43936
GCA_016727585.1	GCA_016727585.1_00076	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP068143.1	87266	88795
GCA_016727585.1	GCA_016727585.1_00302	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP068143.1	328394	329371
GCA_016727585.1	GCA_016727585.1_00303	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP068143.1	329373	330320
GCA_016727585.1	GCA_016727585.1_00304	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP068143.1	330888	331853
GCA_016727585.1	GCA_016727585.1_00557	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.38	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP068143.1	566903	568345
GCA_016727585.1	GCA_016727585.1_00704	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP068143.1	718401	718535
GCA_016727585.1	GCA_016727585.1_00775	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP068143.1	772147	772920
GCA_016727585.1	GCA_016727585.1_00779	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	CP068143.1	774629	775120
GCA_016727585.1	GCA_016727585.1_00785	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP068143.1	778141	778491
GCA_016727585.1	GCA_016727585.1_00943	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP068143.1	905482	906417
GCA_016727585.1	GCA_016727585.1_00954	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP068143.1	918791	919498
GCA_016727585.1	GCA_016727585.1_00955	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA	CP068143.1	919623	920345
GCA_016727585.1	GCA_016727585.1_00958	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP068143.1	922120	922836
GCA_016727585.1	GCA_016727585.1_00997	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP068143.1	957627	958919
GCA_016727585.1	GCA_016727585.1_02363	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP068143.1	2383960	2384571
GCA_016727585.1	GCA_016727585.1_02400	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP068143.1	2417716	2419071
GCA_016727585.1	GCA_016727585.1_02601	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP068143.1	2647182	2648540
GCA_016727585.1	GCA_016727585.1_02701	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	99.51	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP068144.1	1859	2476
GCA_016727585.1	GCA_016727585.1_02707	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP068144.1	6517	6897
GCA_016727585.1	GCA_016727585.1_02708	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.56	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP068144.1	6887	8644
GCA_016727585.1	GCA_016727585.1_02709	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733289.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP068144.1	8751	9596
GCA_023668475.1	GCA_023668475.1_00262	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAMOXA010000011.1	82527	83486
GCA_023668475.1	GCA_023668475.1_03811	cfxA5	broad-spectrum class A beta-lactamase CfxA5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	321	321	100.00	99.69	321	WP_032946415.1	broad-spectrum class A beta-lactamase CfxA5	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAMOXA010000008.1	16992	17957
GCA_023668475.1	GCA_023668475.1_04029	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	388	388	100.00	99.74	388	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	JAMOXA010000009.1	45709	46875
GCA_023668475.1	GCA_023668475.1_04030	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	285	266	100.00	100.00	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAMOXA010000009.1	47088	47945
GCA_028327595.1	GCA_028327595.1_02548	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	218	207	100.00	81.64	207	WP_002570989.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JAQMLT010000006.1	106946	107602
GCA_016026415.1	GCA_016026415.1_00106	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	98.99	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP065628.1	107465	109246
GCA_016026415.1	GCA_016026415.1_00257	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.24	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP065628.1	273394	274248
GCA_016026415.1	GCA_016026415.1_00668	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP065628.1	758972	760147
GCA_016026415.1	GCA_016026415.1_01372	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP065628.1	1514458	1515633
GCA_016026415.1	GCA_016026415.1_01374	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP065628.1	1515837	1516673
GCA_016026415.1	GCA_016026415.1_01375	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP065628.1	1516673	1517476
GCA_016026415.1	GCA_016026415.1_01378	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP065628.1	1518777	1519592
GCA_016026415.1	GCA_016026415.1_02339	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP065628.1	2605712	2606158
GCA_016026415.1	GCA_016026415.1_02422	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP065628.1	2687988	2689412
GCA_003812425.1	GCA_003812425.1_00734	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	96	142	62.68	93.26	89	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP033782.1	760346	760636
GCA_003812425.1	GCA_003812425.1_00821	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP033782.1	863102	863449
GCA_003812425.1	GCA_003812425.1_00824	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP033782.1	865627	866916
GCA_003812425.1	GCA_003812425.1_00856	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP033782.1	901959	903965
GCA_003812425.1	GCA_003812425.1_01121	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP033782.1	1175520	1176812
GCA_003812425.1	GCA_003812425.1_01463	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	PARTIALP	140	213	64.79	100.00	138	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NA	NA	CP033782.1	1480499	1480921
GCA_003812425.1	GCA_003812425.1_01526	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP033782.1	1527931	1528311
GCA_003812425.1	GCA_003812425.1_01527	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP033782.1	1528301	1530058
GCA_003812425.1	GCA_003812425.1_01528	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP033782.1	1530165	1531010
GCA_003812425.1	GCA_003812425.1_02519	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP033781.1	7058	8497
GCA_003812425.1	GCA_003812425.1_02546	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP033783.1	1542	2276
GCA_020388965.1	GCA_020388965.1_00040	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP077915.1	30997	32289
GCA_020388965.1	GCA_020388965.1_01496	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.56	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP077915.1	1525110	1526465
GCA_020388965.1	GCA_020388965.1_01697	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP077915.1	1756331	1757689
GCA_020388965.1	GCA_020388965.1_01821	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP077915.1	1892179	1893231
GCA_020388965.1	GCA_020388965.1_01856	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP077915.1	1934765	1936294
GCA_020388965.1	GCA_020388965.1_02074	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP077915.1	2173195	2174172
GCA_020388965.1	GCA_020388965.1_02075	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP077915.1	2174174	2175121
GCA_020388965.1	GCA_020388965.1_02076	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP077915.1	2175688	2176653
GCA_020388965.1	GCA_020388965.1_02161	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	98.56	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP077915.1	2265110	2265529
GCA_020388965.1	GCA_020388965.1_02329	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.38	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP077915.1	2410805	2412247
GCA_020388965.1	GCA_020388965.1_02477	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP077915.1	2564621	2564755
GCA_020388965.1	GCA_020388965.1_02493	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP077915.1	2581841	2582191
GCA_020388965.1	GCA_020388965.1_02516	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP077915.1	2600901	2601746
GCA_020388965.1	GCA_020388965.1_02519	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	97.62	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP077915.1	2603599	2603979
GCA_020388965.1	GCA_020388965.1_02660	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP077915.1	2716302	2717237
GCA_020388965.1	GCA_020388965.1_02661	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP077915.1	2717239	2718222
GCA_020388965.1	GCA_020388965.1_02666	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	230	235	97.87	95.65	230	ABD31004.1	serine protease SplA	NA	NA	CP077915.1	2722308	2723000
GCA_020388965.1	GCA_020388965.1_02667	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA	CP077915.1	2723125	2723847
GCA_020388965.1	GCA_020388965.1_02670	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	99.58	238	ABD30999.1	serine protease SplE	NA	NA	CP077915.1	2725622	2726338
GCA_022689185.1	GCA_022689185.1_00153	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCXW010000014.1	87	467
GCA_022689185.1	GCA_022689185.1_00154	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCXW010000014.1	457	2214
GCA_022689185.1	GCA_022689185.1_00155	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCXW010000014.1	2321	3166
GCA_022689185.1	GCA_022689185.1_01013	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXW010000002.1	265828	266247
GCA_022689185.1	GCA_022689185.1_01337	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXW010000003.1	140755	142047
GCA_022689185.1	GCA_022689185.1_01471	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXW010000003.1	284690	285763
GCA_019330225.1	GCA_019330225.1_00827	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073900.1	806408	806893
GCA_019330225.1	GCA_019330225.1_00830	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073900.1	808649	810088
GCA_019330225.1	GCA_019330225.1_00951	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073900.1	885716	886357
GCA_019330225.1	GCA_019330225.1_00972	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073900.1	905177	906022
GCA_019330225.1	GCA_019330225.1_00973	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073900.1	906129	907886
GCA_019330225.1	GCA_019330225.1_00974	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073900.1	907876	908256
GCA_019330225.1	GCA_019330225.1_02463	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073900.1	2423336	2424403
GCA_019330225.1	GCA_019330225.1_02514	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073900.1	2482201	2482437
GCA_019330225.1	GCA_019330225.1_02591	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073900.1	2565075	2565422
GCA_019330225.1	GCA_019330225.1_02594	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073900.1	2567591	2568889
GCA_019330225.1	GCA_019330225.1_02604	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073900.1	2577675	2578325
GCA_019330225.1	GCA_019330225.1_02605	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073900.1	2578407	2580050
GCA_019330225.1	GCA_019330225.1_02606	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073900.1	2580108	2580446
GCA_019330225.1	GCA_019330225.1_02652	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073900.1	2619412	2619783
GCA_019330225.1	GCA_019330225.1_02653	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073900.1	2619783	2621540
GCA_019330225.1	GCA_019330225.1_02654	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073900.1	2621640	2623646
GCA_019330225.1	GCA_019330225.1_02743	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073902.1	449	1993
GCA_003044725.1	GCA_003044725.1_02002	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	POXV01000015.1	899	1318
GCA_003044725.1	GCA_003044725.1_02005	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	POXV01000015.1	2161	3021
GCA_003044725.1	GCA_003044725.1_02010	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	POXV01000015.1	6273	7088
GCA_003044725.1	GCA_003044725.1_02011	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	POXV01000015.1	7533	7952
GCA_003044725.1	GCA_003044725.1_02012	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	POXV01000015.1	7952	8788
GCA_003044725.1	GCA_003044725.1_02424	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	POXV01000032.1	93	908
GCA_028325975.1	GCA_028325975.1_00654	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQMJY010000001.1	231351	232568
GCA_028325975.1	GCA_028325975.1_00655	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQMJY010000001.1	232688	234151
GCA_028325975.1	GCA_028325975.1_01010	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.36	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQMJY010000002.1	16784	18520
GCA_028325975.1	GCA_028325975.1_01011	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQMJY010000002.1	18522	20246
GCA_028325975.1	GCA_028325975.1_02035	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMJY010000009.1	9683	11602
GCA_016894265.1	GCA_016894265.1_00327	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP069791.1	299013	300794
GCA_016894265.1	GCA_016894265.1_00502	srtB	class B sortase SrtB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	329	329	99.39	93.27	327	CAE48738.1	class B sortase SrtB	NA	NA	CP069791.1	464896	465885
GCA_000193065.2	GCA_000193065.2_00972	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	AEPC01000015.1	41117	42058
GCA_000344275.1	GCA_000344275.1_00107	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AORU01000001.1	101044	101472
GCA_900009115.1	GCA_900009115.1_03665	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	398	399	96.49	60.78	385	WP_000804064.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	LN890335.1	3975728	3976924
GCA_900009115.1	GCA_900009115.1_03979	catB	type B chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	210	98.10	80.58	206	WP_063843223.1	type B chloramphenicol O-acetyltransferase	NF000490.1	type B chloramphenicol O-acetyltransferase	LN890335.1	4306297	4306947
GCA_900009115.1	GCA_900009115.1_04887	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	261	266	97.74	42.15	261	WP_004861468.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	LN890335.1	5332745	5333530
GCA_900009115.1	GCA_900009115.1_05273	blaELC	ELC family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	HMM	430	450	100.00	87.11	450	WP_232734851.1	ELC family class C beta-lactamase	NF050047.1	ELC family class C beta-lactamase	LN890335.1	5764963	5766255
GCA_900009115.1	GCA_900009115.1_05372	blaOXA-114g	class D beta-lactamase OXA-114g	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	275	275	100.00	100.00	275	WP_063861000.1	class D beta-lactamase OXA-114g	NF033818.0	OXA-114 family class D beta-lactamase	LN890335.1	5878617	5879444
GCA_003264145.1	GCA_003264145.1_01303	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	123	100.00	45.60	125	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NAQX01000007.1	49589	49963
GCA_000156615.2	GCA_000156615.2_00785	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	479	513	93.37	96.66	479	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	GL542875.1	186988	188427
GCA_000156615.2	GCA_000156615.2_02290	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GL542880.1	46910	48334
GCA_003351625.1	GCA_003351625.1_00169	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031238.1	193905	195299
GCA_030450175.1	GCA_030450175.1_00590	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP073095.1	584385	585200
GCA_030450175.1	GCA_030450175.1_00593	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP073095.1	586885	587304
GCA_030450175.1	GCA_030450175.1_00594	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP073095.1	587304	588140
GCA_030450175.1	GCA_030450175.1_00596	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP073095.1	588344	589519
GCA_900105505.1	GCA_900105505.1_01926	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FNRU01000002.1	1980730	1982151
GCA_900105505.1	GCA_900105505.1_01937	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	148	148	100.00	96.62	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	FNRU01000002.1	1987446	1987892
GCA_938028245.1	GCA_938028245.1_00326	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CALJAI010000008.1	70756	72675
GCA_016648925.1	GCA_016648925.1_00325	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JACLQX010000011.1	41415	41843
GCA_016648925.1	GCA_016648925.1_01254	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JACLQX010000003.1	75831	77294
GCA_016648925.1	GCA_016648925.1_01255	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JACLQX010000003.1	77414	78631
GCA_016648925.1	GCA_016648925.1_02063	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JACLQX010000009.1	69093	70817
GCA_016648925.1	GCA_016648925.1_02064	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JACLQX010000009.1	70819	72555
GCA_024539855.1	GCA_024539855.1_00214	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAFJMF010000001.1	249589	250764
GCA_024539855.1	GCA_024539855.1_00216	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAFJMF010000001.1	250968	251804
GCA_024539855.1	GCA_024539855.1_00217	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JAFJMF010000001.1	251804	252607
GCA_024539855.1	GCA_024539855.1_00220	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAFJMF010000001.1	253908	254723
GCA_024539855.1	GCA_024539855.1_02002	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFJMF010000047.1	925	2349
GCA_024539855.1	GCA_024539855.1_02238	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	98.99	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JAFJMF010000056.1	97	1878
GCA_024539855.1	GCA_024539855.1_02255	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.24	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAFJMF010000059.1	246	1100
GCA_016766915.1	GCA_016766915.1_01605	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	43.69	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP068488.1	2025784	2026110
GCA_016766915.1	GCA_016766915.1_02554	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.36	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP068488.1	3091697	3092656
GCA_003369875.1	GCA_003369875.1_00957	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.43	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	LGOX01000003.1	186903	188381
GCA_003369875.1	GCA_003369875.1_01174	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_063856111.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LGOX01000003.1	436954	438873
GCA_018128005.1	GCA_018128005.1_00278	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP072354.1	331276	333201
GCA_018128005.1	GCA_018128005.1_01760	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072354.1	2012451	2013641
GCA_018128005.1	GCA_018128005.1_02620	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP072355.1	931008	931973
GCA_000026665.1	GCA_000026665.1_00914	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	FM211187.1	869941	871140
GCA_000026665.1	GCA_000026665.1_01288	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	FM211187.1	1228032	1228682
GCA_000026665.1	GCA_000026665.1_01336	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	FM211187.1	1278602	1280521
GCA_015553015.1	GCA_015553015.1_01230	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JADNFW010000003.1	68913	69650
GCA_015553015.1	GCA_015553015.1_01231	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JADNFW010000003.1	70757	72676
GCA_002847685.2	GCA_002847685.2_00559	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP126968.1	612549	613403
GCA_029926805.1	GCA_029926805.1_00004	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAREFU010000010.1	2721	4727
GCA_029926805.1	GCA_029926805.1_00044	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFU010000010.1	48127	49416
GCA_029926805.1	GCA_029926805.1_00048	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREFU010000010.1	51582	51929
GCA_029926805.1	GCA_029926805.1_00145	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JAREFU010000013.1	8533	9150
GCA_029926805.1	GCA_029926805.1_00149	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREFU010000013.1	11304	11684
GCA_029926805.1	GCA_029926805.1_00150	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREFU010000013.1	11674	13431
GCA_029926805.1	GCA_029926805.1_00151	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREFU010000013.1	13538	14383
GCA_029926805.1	GCA_029926805.1_00204	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.39	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAREFU010000015.1	13330	13890
GCA_029926805.1	GCA_029926805.1_00205	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	504	514	98.05	99.01	504	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAREFU010000015.1	14104	15618
GCA_029926805.1	GCA_029926805.1_00239	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAREFU010000018.1	3714	5180
GCA_029926805.1	GCA_029926805.1_00247	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JAREFU010000019.1	285	3359
GCA_029926805.1	GCA_029926805.1_00904	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAREFU010000025.1	1099	2538
GCA_029926805.1	GCA_029926805.1_00914	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JAREFU010000028.1	1086	1829
GCA_029926805.1	GCA_029926805.1_01218	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREFU010000002.1	332243	333316
GCA_029926805.1	GCA_029926805.1_01238	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAREFU010000030.1	166	489
GCA_029926805.1	GCA_029926805.1_01241	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	87	126	57.94	100.00	73	WP_001284656.1	penicillinase repressor BlaI	NA	NA	JAREFU010000031.1	1095	1358
GCA_029926805.1	GCA_029926805.1_02334	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAREFU010000007.1	59239	59661
GCA_029926805.1	GCA_029926805.1_02519	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFU010000009.1	60453	61742
GCA_009496355.1	GCA_009496355.1_01527	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJY01000005.1	109469	110668
GCA_009379715.1	GCA_009379715.1_01698	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXDK01000009.1	111122	112063
GCA_001121785.1	GCA_001121785.1_01875	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CMJT01000020.1	35581	37500
GCA_001121785.1	GCA_001121785.1_01973	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	347	399	86.97	98.27	347	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CMJT01000023.1	19883	20926
GCA_002901805.1	GCA_002901805.1_00003	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	PARTIALP	88	122	72.13	96.59	88	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	PPQA01000001.1	1602	1868
GCA_002901805.1	GCA_002901805.1_00143	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPQA01000067.1	68504	69793
GCA_002901805.1	GCA_002901805.1_00328	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPQA01000073.1	125437	126729
GCA_001809115.1	GCA_001809115.1_01734	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV795763.1	153145	154785
GCA_009717575.1	GCA_009717575.1_00356	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.64	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMYW01000001.1	409131	410855
GCA_009717575.1	GCA_009717575.1_00357	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.97	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMYW01000001.1	410857	412593
GCA_009717575.1	GCA_009717575.1_01384	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYW01000003.1	55624	56841
GCA_009717575.1	GCA_009717575.1_01385	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYW01000003.1	56961	58424
GCA_937975755.1	GCA_937975755.1_00625	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.73	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CALJTW010000044.1	6382	7761
GCA_018791825.1	GCA_018791825.1_00907	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHKGX010000001.1	935420	935848
GCA_002441815.1	GCA_002441815.1_00186	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	131	121	100.00	50.37	135	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JXKB01000001.1	187356	187751
GCA_019880465.1	GCA_019880465.1_00439	ampC-Ecan	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	381	381	100.00	99.74	381	WP_006178946.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	NF041666.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	CP082280.1	431137	432282
GCA_019880465.1	GCA_019880465.1_00595	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	95.74	141	WP_038415208.1	fosfomycin resistance glutathione transferase FosA	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	CP082280.1	597842	598267
GCA_019880465.1	GCA_019880465.1_01434	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	94.07	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	CP082280.1	1466608	1468782
GCA_019880465.1	GCA_019880465.1_01437	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	90.62	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP082280.1	1471198	1474857
GCA_019880465.1	GCA_019880465.1_01438	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.72	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP082280.1	1474999	1476114
GCA_019880465.1	GCA_019880465.1_01476	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	100.00	78.01	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP082280.1	1521051	1521482
GCA_019880465.1	GCA_019880465.1_02037	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	122	102	100.00	66.94	124	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP082280.1	2074892	2075260
GCA_019880465.1	GCA_019880465.1_04396	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	88.81	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP082280.1	4554940	4555833
GCA_019880465.1	GCA_019880465.1_04678	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	99.29	90.00	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP082281.1	134650	135075
GCA_019880465.1	GCA_019880465.1_04697	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	448	466	96.14	97.99	448	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP082281.1	150053	151399
GCA_019880465.1	GCA_019880465.1_04699	mcr-9.1	phosphoethanolamine--lipid A transferase MCR-9.1	plus	AMR	AMR	COLISTIN	COLISTIN	ALLELEP	539	539	100.00	100.00	539	AYW01299.1	phosphoethanolamine--lipid A transferase MCR-9.1	NF033836.1	MCR-9 family phosphoethanolamine--lipid A transferase	CP082281.1	152595	154214
GCA_019880465.1	GCA_019880465.1_04756	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	94.44	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP082281.1	203783	204217
GCA_019880465.1	GCA_019880465.1_04758	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	212	212	100.00	100.00	212	AAA88369.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP082281.1	204515	205153
GCA_019880465.1	GCA_019880465.1_04759	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	AAA88370.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP082281.1	205265	205630
GCA_019880465.1	GCA_019880465.1_04760	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	98.72	85.71	77	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP082281.1	205627	205863
GCA_019880465.1	GCA_019880465.1_04771	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP082281.1	213275	214111
GCA_019880465.1	GCA_019880465.1_04772	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP082281.1	214111	214530
GCA_019880465.1	GCA_019880465.1_04803	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	95.31	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP082281.1	246034	246612
GCA_019880465.1	GCA_019880465.1_04807	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	193	193	100.00	100.00	193	AAA86846.1	tellurium resistance-associated protein TerZ	NA	NA	CP082281.1	249359	249940
GCA_019880465.1	GCA_019880465.1_04814	terW	tellurium resistance protein TerW	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	155	155	100.00	100.00	155	AAC44736.1	tellurium resistance protein TerW	NA	NA	CP082281.1	256511	256978
GCA_001974965.1	GCA_001974965.1_00313	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.23	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP015886.1	313982	315508
GCA_001974965.1	GCA_001974965.1_00551	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP015886.1	584263	585831
GCA_001974965.1	GCA_001974965.1_00553	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	231	210	96.19	98.02	202	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP015886.1	586594	587289
GCA_001974965.1	GCA_001974965.1_00554	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP015886.1	587693	588931
GCA_001974965.1	GCA_001974965.1_00676	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP015886.1	724055	724960
GCA_001974965.1	GCA_001974965.1_01477	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP015886.1	1527168	1528547
GCA_014131735.1	GCA_014131735.1_00095	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.44	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP039121.1	106966	109080
GCA_022070545.1	GCA_022070545.1_01247	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035235.1	1187696	1188895
GCA_013315255.1	GCA_013315255.1_00011	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JABUGZ010000001.1	6074	7552
GCA_000262285.1	GCA_000262285.1_00191	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AJSV01000006.1	5172	6812
GCA_000262285.1	GCA_000262285.1_00629	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.34	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AJSV01000008.1	221839	223233
GCA_001064185.1	GCA_001064185.1_01226	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JVNV01000046.1	1889	2743
GCA_002093515.1	GCA_002093515.1_00077	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LNVG01000001.1	74946	76865
GCA_001697945.1	GCA_001697945.1_00622	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016676.1	639993	641372
GCA_001697945.1	GCA_001697945.1_01680	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016676.1	1714428	1715954
GCA_001697945.1	GCA_001697945.1_01881	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016676.1	1926429	1927997
GCA_001697945.1	GCA_001697945.1_01883	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016676.1	1928822	1929454
GCA_001697945.1	GCA_001697945.1_01884	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016676.1	1929862	1931100
GCA_022689725.1	GCA_022689725.1_01569	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JALCWU010000031.1	537	860
GCA_022689725.1	GCA_022689725.1_01830	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWU010000004.1	85223	85570
GCA_022689725.1	GCA_022689725.1_01833	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWU010000004.1	87738	89027
GCA_018127985.1	GCA_018127985.1_01020	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072357.1	1181069	1182265
GCA_030225625.1	GCA_030225625.1_00680	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JASOZK010000016.1	19040	20959
GCA_900447665.1	GCA_900447665.1_02395	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	133	95.49	58.59	128	WP_010989789.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	UGJD01000001.1	2320001	2320411
GCA_900447665.1	GCA_900447665.1_02645	vanC	D-alanine--D-serine ligase VanC2/3	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	350	350	100.00	100.00	350	WP_060792851.1	D-alanine--D-serine ligase VanC2/3	NF012214.1	D-alanine--D-serine ligase VanC	UGJD01000001.1	2538999	2540051
GCA_900447665.1	GCA_900447665.1_02646	vanXY-C	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	190	190	100.00	100.00	190	WP_060792852.1	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	NF000380.1	D,D-carboxypeptidase/D,D-dipeptidase VanXY	UGJD01000001.1	2540048	2540620
GCA_900447665.1	GCA_900447665.1_02647	vanTc	membrane-bound serine racemase VanT	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	700	706	100.00	98.73	706	WP_063856758.1	membrane-bound serine racemase VanT	NF033132.1	membrane-bound serine racemase VanT	UGJD01000001.1	2540617	2542719
GCA_900447665.1	GCA_900447665.1_02648	vanR-C	vancomycin resistance response regulator transcription factor VanR-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	231	231	100.00	100.00	231	WP_005228837.1	vancomycin resistance response regulator transcription factor VanR-C	NF000403.1	vancomycin resistance response regulator transcription factor VanR-C	UGJD01000001.1	2542818	2543513
GCA_900447665.1	GCA_900447665.1_02649	vanS-C	vancomycin resistance histidine kinase VanS-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	376	376	100.00	99.73	376	WP_034869172.1	vancomycin resistance histidine kinase VanS-C	NF033091.0	vancomycin resistance histidine kinase VanS	UGJD01000001.1	2543503	2544633
GCA_022648595.1	GCA_022648595.1_00646	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP076498.1	596007	597926
GCA_022648595.1	GCA_022648595.1_00946	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP076498.1	908209	910128
GCA_022648595.1	GCA_022648595.1_01135	lsa(A)	ABC-F type ribosomal protection protein Lsa(A)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	EXACTP	498	498	100.00	100.00	498	WP_002387187.1	ABC-F type ribosomal protection protein Lsa(A)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP076498.1	1074371	1075867
GCA_022648595.1	GCA_022648595.1_01179	dfrF	trimethoprim-resistant dihydrofolate reductase DfrF	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	164	164	100.00	100.00	164	WP_002322211.1	trimethoprim-resistant dihydrofolate reductase DfrF	NF000333.1	trimethoprim-resistant dihydrofolate reductase DfrF	CP076498.1	1121913	1122407
GCA_022648595.1	GCA_022648595.1_01872	dfrF	trimethoprim-resistant dihydrofolate reductase DfrF	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	164	164	100.00	100.00	164	WP_002322211.1	trimethoprim-resistant dihydrofolate reductase DfrF	NF000333.1	trimethoprim-resistant dihydrofolate reductase DfrF	CP076498.1	1834700	1835194
GCA_022648595.1	GCA_022648595.1_03132	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038792.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP076499.1	43812	44549
GCA_022648595.1	GCA_022648595.1_03138	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP076499.1	47808	48716
GCA_022648595.1	GCA_022648595.1_03139	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP076499.1	48713	49255
GCA_022648595.1	GCA_022648595.1_03140	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP076499.1	49348	50142
GCA_022648595.1	GCA_022648595.1_03369	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	99.60	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP076502.1	21273	22016
GCA_022648595.1	GCA_022648595.1_03370	vanZ-A	glycopeptide resistance protein VanZ-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	161	161	100.00	100.00	161	WP_000516404.1	glycopeptide resistance protein VanZ-A	NF033125.2	glycopeptide resistance protein VanZ-A	CP076502.1	22633	23118
GCA_022648595.1	GCA_022648595.1_03371	vanY-A	D-Ala-D-Ala carboxypeptidase VanY-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	303	303	100.00	100.00	303	WP_001812592.1	D-Ala-D-Ala carboxypeptidase VanY-A	NF000472.1	VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase	CP076502.1	23271	24182
GCA_022648595.1	GCA_022648595.1_03373	vanX-A	D-Ala-D-Ala dipeptidase VanX-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	202	202	100.00	99.50	202	WP_000402347.1	D-Ala-D-Ala dipeptidase VanX-A	NF033115.1	D-Ala-D-Ala dipeptidase VanX	CP076502.1	25660	26268
GCA_022648595.1	GCA_022648595.1_03374	vanA	D-alanine--(R)-lactate ligase VanA	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	343	343	100.00	100.00	343	WP_001079845.1	D-alanine--(R)-lactate ligase VanA	NF012217.1	D-alanine--(R)-lactate ligase VanA	CP076502.1	26274	27305
GCA_022648595.1	GCA_022648595.1_03375	vanH-A	D-lactate dehydrogenase VanH-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	322	322	100.00	100.00	322	WP_001059542.1	D-lactate dehydrogenase VanH-A	NF000371.1	VanH-A/VanH-Pt family D-lactate dehydrogenase	CP076502.1	27298	28266
GCA_022648595.1	GCA_022648595.1_03376	vanS-A	vancomycin resistance histidine kinase VanS-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	380	384	98.96	99.74	380	WP_002305818.1	vancomycin resistance histidine kinase VanS-A	NF033091.0	vancomycin resistance histidine kinase VanS	CP076502.1	28481	29623
GCA_015700525.1	GCA_015700525.1_00033	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JACSZL010000001.1	26761	28680
GCA_015700525.1	GCA_015700525.1_00070	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JACSZL010000001.1	59607	61070
GCA_015700525.1	GCA_015700525.1_00071	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JACSZL010000001.1	61091	62308
GCA_006715895.1	GCA_006715895.1_01082	blaPOM	POM family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	286	286	100.00	99.65	286	WP_044403015.1	subclass B3 metallo-beta-lactamase POM-1	NF000438.2	POM family subclass B3 metallo-beta-lactamase	VFOB01000001.1	1184893	1185753
GCA_006715895.1	GCA_006715895.1_01211	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	414	100.00	75.48	416	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	VFOB01000001.1	1298920	1300161
GCA_006715895.1	GCA_006715895.1_01427	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	260	259	99.61	41.76	261	WP_014386410.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	VFOB01000001.1	1573914	1574696
GCA_006715895.1	GCA_006715895.1_04044	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	213	221	95.02	68.57	210	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	VFOB01000001.1	4344472	4345113
GCA_003351445.1	GCA_003351445.1_00475	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	98.06	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031242.1	477475	478869
GCA_024104455.1	GCA_024104455.1_00644	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHAVH010000001.1	184760	185179
GCA_024104455.1	GCA_024104455.1_01093	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHAVH010000025.1	3162	4454
GCA_024104455.1	GCA_024104455.1_01102	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHAVH010000026.1	2727	4733
GCA_024104455.1	GCA_024104455.1_02139	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHAVH010000005.1	128600	129673
GCA_000413395.1	GCA_000413395.1_02944	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	328	296	91.22	67.41	270	WP_005827792.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	KE340315.1	11355	12341
GCA_000162295.1	GCA_000162295.1_00429	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001112624.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	GG704579.1	34581	35369
GCA_000162295.1	GCA_000162295.1_00543	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	GG704579.1	158794	159609
GCA_000162295.1	GCA_000162295.1_00668	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	91.67	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	GG704578.1	76080	76514
GCA_000162295.1	GCA_000162295.1_00670	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	GG704578.1	77253	77678
GCA_000162295.1	GCA_000162295.1_00671	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	96.26	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GG704578.1	77717	79402
GCA_000162295.1	GCA_000162295.1_01460	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	397	397	100.00	100.00	397	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	GG704575.1	123116	124309
GCA_000162295.1	GCA_000162295.1_01647	blaADC-158	extended-spectrum class C beta-lactamase ADC-158	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	383	383	100.00	100.00	383	WP_001211227.1	extended-spectrum class C beta-lactamase ADC-158	NF000425.2	ADC family extended-spectrum class C beta-lactamase	GG704575.1	333667	334818
GCA_000162295.1	GCA_000162295.1_01785	nreB	nickel resistance MFS transporter NreB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	416	416	100.00	98.08	416	ADY84088.1	nickel resistance MFS transporter NreB	NA	NA	GG704574.1	29567	30817
GCA_000162295.1	GCA_000162295.1_02925	amvA	multidrug efflux MFS transporter AmvA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	492	492	100.00	98.98	492	ACQ82816.1	multidrug efflux MFS transporter AmvA	NA	NA	GG704572.1	304858	306336
GCA_000162295.1	GCA_000162295.1_03485	blaOXA-98	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_001021777.1	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	NF000268.2	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase	GG704572.1	896114	896938
GCA_000162295.1	GCA_000162295.1_03733	abaF	fosfomycin efflux MFS transporter AbaF	plus	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	429	429	100.00	100.00	429	ABO11759.2	fosfomycin efflux MFS transporter AbaF	NA	NA	GG704572.1	1157897	1159186
GCA_900444875.1	GCA_900444875.1_00081	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	409	392	100.00	75.38	394	WP_430673475.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	UFRZ01000001.1	64006	65235
GCA_900444875.1	GCA_900444875.1_00916	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	950	949	99.79	95.78	947	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	UFRZ01000001.1	941224	944076
GCA_900444875.1	GCA_900444875.1_02208	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	98.74	79.08	392	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	UFRZ01000001.1	2262287	2263480
GCA_900444875.1	GCA_900444875.1_03131	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001279068.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	UFRZ01000001.1	3196741	3197529
GCA_002847785.1	GCA_002847785.1_00106	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	PKHS01000001.1	116978	117832
GCA_002847785.1	GCA_002847785.1_00116	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PKHS01000001.1	128699	130120
GCA_002847785.1	GCA_002847785.1_00587	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	PKHS01000014.1	3588	5369
GCA_002847785.1	GCA_002847785.1_00589	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	PKHS01000016.1	172	987
GCA_002847785.1	GCA_002847785.1_01877	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	PKHS01000006.1	182610	183785
GCA_002847785.1	GCA_002847785.1_01879	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	PKHS01000006.1	183989	184825
GCA_002847785.1	GCA_002847785.1_01880	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	PKHS01000006.1	184825	185628
GCA_900683645.1	GCA_900683645.1_00183	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CAACYF010000002.1	8102	9277
GCA_900683645.1	GCA_900683645.1_00186	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	276	279	98.92	99.64	276	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CAACYF010000002.1	10877	11707
GCA_900683645.1	GCA_900683645.1_01020	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CAACYF010000004.1	622	1482
GCA_900683645.1	GCA_900683645.1_01692	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAACYF010000005.1	711935	713377
GCA_900683645.1	GCA_900683645.1_02802	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	520	513	100.00	97.86	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CAACYF010000007.1	360783	362345
GCA_900683645.1	GCA_900683645.1_02803	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAACYF010000007.1	362532	363386
GCA_015273995.1	GCA_015273995.1_00464	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACGQC010000001.1	497124	498197
GCA_015273995.1	GCA_015273995.1_00575	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGQC010000001.1	639703	640992
GCA_015273995.1	GCA_015273995.1_00576	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACGQC010000001.1	641010	641411
GCA_015273995.1	GCA_015273995.1_01827	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGQC010000006.1	60499	61788
GCA_015273995.1	GCA_015273995.1_02564	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGQC010000016.1	7588	8433
GCA_015273995.1	GCA_015273995.1_02565	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGQC010000016.1	8540	10297
GCA_015273995.1	GCA_015273995.1_02566	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGQC010000016.1	10287	10667
GCA_015273995.1	GCA_015273995.1_02569	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACGQC010000016.1	12458	13018
GCA_015273995.1	GCA_015273995.1_02570	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACGQC010000016.1	13202	14746
GCA_015273995.1	GCA_015273995.1_02574	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JACGQC010000017.1	383	1369
GCA_015273995.1	GCA_015273995.1_02575	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACGQC010000017.1	1469	3475
GCA_015273995.1	GCA_015273995.1_02609	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACGQC010000024.1	1251	1985
GCA_015273995.1	GCA_015273995.1_02611	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JACGQC010000025.1	400	1839
GCA_015273995.1	GCA_015273995.1_02612	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGQC010000026.1	136	621
GCA_000160675.1	GCA_000160675.1_00222	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	97.58	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	GG694018.1	82662	84401
GCA_000160675.1	GCA_000160675.1_00223	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	92.92	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	GG694018.1	84398	86137
GCA_004000885.1	GCA_004000885.1_00137	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	68.06	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	BIMC01000001.1	143919	144569
GCA_004000885.1	GCA_004000885.1_00880	taeA	ABC-F type ribosomal protection protein TaeA	core	AMR	AMR	PLEUROMUTILIN	TIAMULIN	BLASTP	651	648	100.00	91.86	651	WP_071223118.1	ABC-F type ribosomal protection protein TaeA	NA	NA	BIMC01000002.1	119642	121597
GCA_004000885.1	GCA_004000885.1_01410	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	312	304	92.11	66.90	287	WP_087344360.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	BIMC01000003.1	160589	161527
GCA_004000885.1	GCA_004000885.1_03231	aac(2)-IIb	kasugamycin N-acetyltransferase AAC(2)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	HMM	239	240	99.58	66.95	239	WP_071224044.1	kasugamycin N-acetyltransferase AAC(2)-IIb	NF033472.1	kasugamycin N-acetyltransferase AAC(2)-IIb	BIMC01000010.1	43406	44125
GCA_004000885.1	GCA_004000885.1_03535	tetB(58)	tetracycline efflux ABC transporter Tet(58) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	271	271	100.00	91.88	271	WP_071223302.1	tetracycline efflux ABC transporter Tet(58) subunit B	NA	NA	BIMC01000011.1	173177	173992
GCA_004000885.1	GCA_004000885.1_03733	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family A	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	175	169	97.63	64.24	165	AIQ64103.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	NF040503.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	BIMC01000013.1	6060	6587
GCA_004000885.1	GCA_004000885.1_03744	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	107	99.07	46.23	106	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BIMC01000013.1	16802	17161
GCA_004000885.1	GCA_004000885.1_04332	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	97.56	44.64	280	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	BIMC01000017.1	5901	6764
GCA_015840115.1	GCA_015840115.1_00940	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP046379.1	887015	888214
GCA_015840115.1	GCA_015840115.1_01008	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP046379.1	947415	949334
GCA_015840115.1	GCA_015840115.1_01019	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP046379.1	959252	959989
GCA_001812085.1	GCA_001812085.1_00005	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	594	639	92.96	98.82	594	WP_033493020.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV807668.1	492	2276
GCA_001812085.1	GCA_001812085.1_00007	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.54	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV807668.1	4013	4867
GCA_001812085.1	GCA_001812085.1_00873	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV807676.1	185380	187038
GCA_003626305.1	GCA_003626305.1_01423	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHJ01000004.1	102964	103905
GCA_902485085.1	GCA_902485085.1_01570	ncrC	Ni(II)/Co(II) efflux transporter permease subunit NcrC	plus	STRESS	METAL	COPPER/NICKEL	COPPER/NICKEL	BLASTP	377	376	99.47	92.29	376	ADF64798.1	Ni(II)/Co(II) efflux transporter permease subunit NcrC	NA	NA	CABTJS010000071.1	40227	41360
GCA_902485085.1	GCA_902485085.1_01571	ncrB	nickel-sensing transcriptional repressor NcrB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	89	89	100.00	94.38	89	ABF61435.1	nickel-sensing transcriptional repressor NcrB	NA	NA	CABTJS010000071.1	41373	41642
GCA_902485085.1	GCA_902485085.1_01572	ncrA	Metal Resistance	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	432	432	100.00	90.74	432	ABF14406.1	Metal Resistance	NA	NA	CABTJS010000071.1	41744	43042
GCA_902485085.1	GCA_902485085.1_02958	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	731	100.00	82.22	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	CABTJS010000123.1	180975	183173
GCA_902485085.1	GCA_902485085.1_04283	blaCTX-M-5	extended-spectrum class A beta-lactamase CTX-M-5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_032072602.1	extended-spectrum class A beta-lactamase CTX-M-5	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	CABTJS010000174.1	6827	7702
GCA_902485085.1	GCA_902485085.1_04412	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	142	139	100.00	82.73	139	WP_004857515.1	FosA family fosfomycin resistance glutathione transferase	NF000221.4	FosA family fosfomycin resistance glutathione transferase	CABTJS010000178.1	38505	38933
GCA_902485085.1	GCA_902485085.1_04685	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	90.17	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CABTJS010000185.1	1513	2406
GCA_022689365.1	GCA_022689365.1_01369	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXL010000002.1	136792	138084
GCA_022689365.1	GCA_022689365.1_01518	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXL010000002.1	297738	298811
GCA_022689365.1	GCA_022689365.1_02006	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXL010000004.1	31332	31751
GCA_024968525.1	GCA_024968525.1_00074	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	43.90	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP103891.1	70642	71010
GCA_024968525.1	GCA_024968525.1_00185	srtC	class C sortase SrtC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	97.76	312	CAE48741.1	class C sortase SrtC	NA	NA	CP103891.1	170302	171240
GCA_024968525.1	GCA_024968525.1_00186	spaE	SpaD fimbrial minor subunit SpaE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	270	263	100.00	93.16	263	CAE48742.1	SpaD fimbrial minor subunit SpaE	NA	NA	CP103891.1	171212	172024
GCA_024968525.1	GCA_024968525.1_00498	nanH	exo-alpha-sialidase NanH	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	735	721	100.00	97.64	721	ARB89035.1	exo-alpha-sialidase NanH	NA	NA	CP103891.1	482389	484596
GCA_004785935.1	GCA_004785935.1_00708	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	SRRP01000001.1	696555	696983
GCA_927911435.1	GCA_927911435.1_01839	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	640	100.00	99.69	640	WP_063856422.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CAKMPM010000095.1	745	2667
GCA_001697585.1	GCA_001697585.1_00255	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016658.1	237807	239186
GCA_001697585.1	GCA_001697585.1_01317	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016658.1	1318080	1319606
GCA_001697585.1	GCA_001697585.1_01517	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016658.1	1529297	1530865
GCA_001697585.1	GCA_001697585.1_01519	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016658.1	1531690	1532322
GCA_001697585.1	GCA_001697585.1_01520	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016658.1	1532730	1533968
GCA_001697585.1	GCA_001697585.1_01647	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016658.1	1669527	1670432
GCA_025558385.1	GCA_025558385.1_00066	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	98.86	53.60	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP094715.1	70762	71829
GCA_025558385.1	GCA_025558385.1_00410	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.79	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094715.1	446183	447475
GCA_025558385.1	GCA_025558385.1_00881	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP094715.1	889472	890317
GCA_025558385.1	GCA_025558385.1_00882	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.21	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP094715.1	890424	892181
GCA_025558385.1	GCA_025558385.1_00883	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP094715.1	892171	892551
GCA_013394795.1	GCA_013394795.1_02028	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	476	639	74.49	99.79	476	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	JABXYU010000001.1	2124027	2125457
GCA_937876575.1	GCA_937876575.1_01100	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	123	100.00	45.60	125	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CALFGV010000019.1	77573	77947
GCA_937876575.1	GCA_937876575.1_01827	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.60	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CALFGV010000023.1	25467	27110
GCA_009735755.1	GCA_009735755.1_00338	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	PTJT01000002.1	105008	106927
GCA_962720465.1	GCA_962720465.1_00005	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIYJ010000001.1	5813	6718
GCA_962720465.1	GCA_962720465.1_00425	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIYJ010000003.1	63135	64514
GCA_962720465.1	GCA_962720465.1_00809	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.83	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIYJ010000006.1	57074	58600
GCA_962720465.1	GCA_962720465.1_01700	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIYJ010000021.1	20876	21739
GCA_962720465.1	GCA_962720465.1_01701	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.36	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIYJ010000021.1	21756	22994
GCA_007677545.1	GCA_007677545.1_02536	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VECV01000009.1	102357	103781
GCA_018289355.1	GCA_018289355.1_01045	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	43.69	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP072234.1	1299739	1300065
GCA_018289355.1	GCA_018289355.1_02108	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP072234.1	2443085	2444044
GCA_018289355.1	GCA_018289355.1_03196	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	408	99.26	99.01	405	WP_012102963.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP072234.1	3620631	3621848
GCA_018289355.1	GCA_018289355.1_03750	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP072234.1	4262904	4264829
GCA_022405435.1	GCA_022405435.1_00019	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP062376.1	19611	20384
GCA_022405435.1	GCA_022405435.1_00023	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	CP062376.1	22093	22584
GCA_022405435.1	GCA_022405435.1_00027	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP062376.1	24081	24431
GCA_022405435.1	GCA_022405435.1_00185	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP062376.1	151363	152298
GCA_022405435.1	GCA_022405435.1_00196	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP062376.1	164672	165379
GCA_022405435.1	GCA_022405435.1_00197	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA	CP062376.1	165504	166226
GCA_022405435.1	GCA_022405435.1_00200	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP062376.1	168001	168717
GCA_022405435.1	GCA_022405435.1_00239	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP062376.1	203508	204800
GCA_022405435.1	GCA_022405435.1_01590	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP062376.1	1618971	1619582
GCA_022405435.1	GCA_022405435.1_01627	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.33	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP062376.1	1652727	1654082
GCA_022405435.1	GCA_022405435.1_01827	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP062376.1	1882352	1883710
GCA_022405435.1	GCA_022405435.1_01940	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	98.22	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP062376.1	2006656	2010207
GCA_022405435.1	GCA_022405435.1_01963	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP062376.1	2031687	2032739
GCA_022405435.1	GCA_022405435.1_01997	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP062376.1	2075853	2077382
GCA_022405435.1	GCA_022405435.1_02217	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP062376.1	2313198	2314175
GCA_022405435.1	GCA_022405435.1_02218	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP062376.1	2314177	2315124
GCA_022405435.1	GCA_022405435.1_02219	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP062376.1	2315692	2316657
GCA_022405435.1	GCA_022405435.1_02470	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.38	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP062376.1	2550067	2551509
GCA_022405435.1	GCA_022405435.1_02617	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP062376.1	2701547	2701681
GCA_022405435.1	GCA_022405435.1_02673	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	99.51	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP062377.1	2346	2963
GCA_022405435.1	GCA_022405435.1_02679	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP062377.1	7004	7384
GCA_022405435.1	GCA_022405435.1_02680	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.56	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP062377.1	7374	9131
GCA_022405435.1	GCA_022405435.1_02681	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733289.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP062377.1	9238	10083
GCA_016617695.1	GCA_016617695.1_00963	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	120	121	100.00	66.12	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP067088.1	957602	957964
GCA_029926445.1	GCA_029926445.1_00048	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAREHI010000012.1	420	743
GCA_029926445.1	GCA_029926445.1_00056	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAREHI010000015.1	151	636
GCA_029926445.1	GCA_029926445.1_00130	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREHI010000001.1	82910	83983
GCA_029926445.1	GCA_029926445.1_02178	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHI010000006.1	63200	64489
GCA_905373455.1	GCA_905373455.1_02290	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	272	386	72.28	55.83	283	WP_063844518.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAJPSY010000176.1	554	1372
GCA_003182515.1	GCA_003182515.1_01975	vanS	vancomycin resistance histidine kinase VanS	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	373	392	93.88	53.62	373	WP_011461302.1	vancomycin resistance histidine kinase VanS	NF033091.0	vancomycin resistance histidine kinase VanS	QGUD01000004.1	349107	350228
GCA_003182515.1	GCA_003182515.1_01976	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	229	232	99.14	66.52	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	QGUD01000004.1	350221	350910
GCA_003182515.1	GCA_003182515.1_03292	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	128	121	100.00	48.06	129	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	QGUD01000009.1	157527	157913
GCA_006546965.1	GCA_006546965.1_02368	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	78.82	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP041230.1	3153695	3154576
GCA_006546965.1	GCA_006546965.1_02743	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP041230.1	3604563	3606488
GCA_006546965.1	GCA_006546965.1_03941	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.10	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP041230.1	4942677	4944008
GCA_017167685.1	GCA_017167685.1_00449	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFDPJ010000001.1	7367	8791
GCA_030013945.1	GCA_030013945.1_00037	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	459	459	100.00	99.78	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP118781.1	35876	37255
GCA_030013945.1	GCA_030013945.1_00049	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	PARTIALP	88	122	72.13	96.59	88	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP118781.1	47213	47479
GCA_030013945.1	GCA_030013945.1_00056	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP118781.1	54722	56728
GCA_030013945.1	GCA_030013945.1_00057	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP118781.1	56828	58585
GCA_030013945.1	GCA_030013945.1_00058	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP118781.1	58585	58956
GCA_030013945.1	GCA_030013945.1_00129	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP118781.1	129497	130786
GCA_030013945.1	GCA_030013945.1_00132	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP118781.1	132964	133311
GCA_030013945.1	GCA_030013945.1_00208	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP118781.1	215669	216097
GCA_030013945.1	GCA_030013945.1_00987	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	PARTIALP	160	213	73.24	100.00	156	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NA	NA	CP118781.1	944791	945273
GCA_030013945.1	GCA_030013945.1_01011	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	223	281	79.36	95.96	223	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033103.1	class A beta-lactamase	CP118781.1	969632	970303
GCA_030013945.1	GCA_030013945.1_01012	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP118781.1	970410	972167
GCA_030013945.1	GCA_030013945.1_01013	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP118781.1	972157	972537
GCA_019929425.1	GCA_019929425.1_00660	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZPN010000001.1	700230	700658
GCA_001553605.1	GCA_001553605.1_02238	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	249	93.57	46.61	236	WP_193683783.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	CP014229.1	2562152	2562928
GCA_021531445.1	GCA_021531445.1_00035	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	100.00	43.09	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JADYTW010000010.1	45855	46208
GCA_021531445.1	GCA_021531445.1_01002	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JADYTW010000002.1	338491	340410
GCA_021531445.1	GCA_021531445.1_01223	aadE	aminoglycoside 6-adenylyltransferase AadE	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	288	288	100.00	100.00	288	WP_001255868.1	aminoglycoside 6-adenylyltransferase AadE	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JADYTW010000003.1	159085	159951
GCA_916715705.1	GCA_916715705.1_01666	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAKAPC010000034.1	26817	28007
GCA_024104815.1	GCA_024104815.1_00265	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTQ010000014.1	2076	2486
GCA_017299535.1	GCA_017299535.1_01054	smdA	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	591	591	100.00	98.48	591	BAF79679.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	NA	NA	CP071238.1	1099705	1101480
GCA_017299535.1	GCA_017299535.1_01055	smdB	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	592	592	100.00	98.65	592	BAF79680.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	NA	NA	CP071238.1	1101473	1103251
GCA_017299535.1	GCA_017299535.1_01070	sdeY	multidrug efflux RND transporter permease subunit SdeY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1048	1051	99.43	95.70	1046	BAC77251.1	multidrug efflux RND transporter permease subunit SdeY	NA	NA	CP071238.1	1112541	1115687
GCA_017299535.1	GCA_017299535.1_01956	sdeB	multidrug efflux RND transporter permease subunit SdeB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1047	1047	100.00	99.62	1047	AAO18187.2	multidrug efflux RND transporter permease subunit SdeB	NA	NA	CP071238.1	2018139	2021282
GCA_017299535.1	GCA_017299535.1_01957	sdeA	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	395	395	100.00	99.75	395	AAS55383.1	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	CP071238.1	2021307	2022494
GCA_017299535.1	GCA_017299535.1_02296	blaSRT	SRT/SST family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	378	378	100.00	99.47	378	WP_063864750.1	cephalosporin-hydrolyzing class C beta-lactamase SST-1	NF000423.2	SRT/SST family class C beta-lactamase	CP071238.1	2345808	2346944
GCA_017299535.1	GCA_017299535.1_02529	tet(41)	tetracycline efflux MFS transporter Tet(41)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	388	393	98.73	95.62	388	WP_063855881.1	tetracycline efflux MFS transporter Tet(41)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP071238.1	2615255	2616421
GCA_017299535.1	GCA_017299535.1_02613	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	91	102	90.20	71.58	95	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP071238.1	2705490	2705765
GCA_017299535.1	GCA_017299535.1_02627	ssmE	multidrug efflux SMR transporter SsmE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	106	110	96.36	100.00	106	BAF80121.1	multidrug efflux SMR transporter SsmE	NA	NA	CP071238.1	2720893	2721213
GCA_017299535.1	GCA_017299535.1_02729	smfY	multidrug efflux MFS transporter SmfY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	490	490	100.00	98.37	490	BAE79899.1	multidrug efflux MFS transporter SmfY	NA	NA	CP071238.1	2836679	2838151
GCA_017299535.1	GCA_017299535.1_02876	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	139	98.56	67.15	137	WP_004857515.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP071238.1	2978245	2978652
GCA_017299535.1	GCA_017299535.1_04302	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	146	146	100.00	100.00	146	WP_033639326.1	aminoglycoside 6-N-acetyltransferase	NF000021.4	aminoglycoside 6-N-acetyltransferase	CP071238.1	4464222	4464662
GCA_017299535.1	GCA_017299535.1_04798	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	81.27	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP071238.1	4987014	4987916
GCA_009494375.1	GCA_009494375.1_01933	cfxA6	broad-spectrum class A beta-lactamase CfxA6	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	240	320	75.00	99.17	240	WP_117664257.1	broad-spectrum class A beta-lactamase CfxA6	NF012099.1	class A beta-lactamase, subclass A2	VZCD01000163.1	140332	141054
GCA_024295685.1	GCA_024295685.1_00272	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	89.44	61.42	127	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPC010000001.1	255060	255488
GCA_024295685.1	GCA_024295685.1_00277	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPC010000001.1	258459	259676
GCA_024295685.1	GCA_024295685.1_00278	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPC010000001.1	259796	261259
GCA_024295685.1	GCA_024295685.1_00283	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPC010000001.1	263209	263637
GCA_024295685.1	GCA_024295685.1_01306	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JANCPC010000004.1	23487	25406
GCA_012851305.1	GCA_012851305.1_02058	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP051672.1	2333982	2335907
GCA_012851305.1	GCA_012851305.1_02500	cfxA4	extended-spectrum class A beta-lactamase CfxA4	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	321	321	100.00	99.69	321	WP_057280848.1	extended-spectrum class A beta-lactamase CfxA4	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP051672.1	2765005	2765970
GCA_012851305.1	GCA_012851305.1_04193	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP051672.1	4874200	4875165
GCA_020740075.1	GCA_020740075.1_00019	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAJGAZ010000010.1	17265	18731
GCA_020740075.1	GCA_020740075.1_00024	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JAJGAZ010000010.1	21965	25039
GCA_020740075.1	GCA_020740075.1_00042	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JAJGAZ010000011.1	8360	8977
GCA_020740075.1	GCA_020740075.1_01473	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAJGAZ010000002.1	570862	571935
GCA_020740075.1	GCA_020740075.1_01796	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAJGAZ010000004.1	4470	4817
GCA_020740075.1	GCA_020740075.1_01800	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJGAZ010000004.1	6983	8272
GCA_020740075.1	GCA_020740075.1_02242	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJGAZ010000006.1	60457	61746
GCA_020740075.1	GCA_020740075.1_02348	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAJGAZ010000007.1	59037	59459
GCA_021497945.1	GCA_021497945.1_00794	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP046524.1	755931	757850
GCA_021497945.1	GCA_021497945.1_00795	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP046524.1	758958	759695
GCA_028527755.1	GCA_028527755.1_01222	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAQPSM010000022.1	11929	13371
GCA_028527755.1	GCA_028527755.1_01795	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.61	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JAQPSM010000036.1	42	1583
GCA_028527755.1	GCA_028527755.1_01813	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQPSM010000038.1	171	1025
GCA_028527755.1	GCA_028527755.1_01814	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAQPSM010000038.1	1190	3109
GCA_028527755.1	GCA_028527755.1_01968	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAQPSM010000040.1	850	2025
GCA_028527755.1	GCA_028527755.1_01970	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAQPSM010000040.1	2229	3065
GCA_028527755.1	GCA_028527755.1_01971	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JAQPSM010000040.1	3065	3484
GCA_028527755.1	GCA_028527755.1_02272	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAQPSM010000060.1	88	903
GCA_000493795.1	GCA_000493795.1_01626	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	336	263	100.00	100.00	263	WP_001206316.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	AXUQ01000047.1	629	1639
GCA_000019425.1	GCA_000019425.1_00517	emrE	multidrug efflux SMR transporter EmrE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	EXACTP	110	110	100.00	100.00	110	CAA77936.1	multidrug efflux SMR transporter EmrE	NF042984.1	multidrug efflux SMR transporter EmrE	CP000948.1	506870	507202
GCA_000019425.1	GCA_000019425.1_01271	ariR	biofilm/acid-resistance regulator AriR	plus	STRESS	ACID	NA	NA	EXACTP	88	88	100.00	100.00	88	AAC74250.1	biofilm/acid-resistance regulator AriR	NA	NA	CP000948.1	1255833	1256099
GCA_000019425.1	GCA_000019425.1_01794	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	EXACTP	102	102	100.00	100.00	102	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP000948.1	1760361	1760669
GCA_000019425.1	GCA_000019425.1_03560	acrF	multidrug efflux RND transporter permease subunit AcrF	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	1034	1034	100.00	100.00	1034	AAC76298.1	multidrug efflux RND transporter permease subunit AcrF	NA	NA	CP000948.1	3510800	3513904
GCA_000019425.1	GCA_000019425.1_03804	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	BAE77793.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP000948.1	3744296	3744649
GCA_000019425.1	GCA_000019425.1_03806	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	94.33	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP000948.1	3746005	3746430
GCA_000019425.1	GCA_000019425.1_03993	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	394	394	100.00	100.00	394	BAE77620.1	multidrug efflux MFS transporter EmrD	NA	NA	CP000948.1	3949529	3950713
GCA_000019425.1	GCA_000019425.1_04262	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	CP000948.1	4204189	4205091
GCA_000019425.1	GCA_000019425.1_04542	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	377	377	100.00	100.00	377	AAC77110.1	BlaEC family class C beta-lactamase	NF000185.2	BlaEC family class C beta-lactamase	CP000948.1	4476196	4477329
GCA_962728865.1	GCA_962728865.1_00234	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIZC010000001.1	251035	252561
GCA_962728865.1	GCA_962728865.1_00354	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIZC010000002.1	86050	86682
GCA_962728865.1	GCA_962728865.1_00355	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.15	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIZC010000002.1	86935	88173
GCA_962728865.1	GCA_962728865.1_00505	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIZC010000003.1	76559	77938
GCA_962728865.1	GCA_962728865.1_00896	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIZC010000006.1	88640	89545
GCA_001698085.1	GCA_001698085.1_00736	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.82	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016682.1	728667	730193
GCA_001698085.1	GCA_001698085.1_00931	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016682.1	932855	934423
GCA_001698085.1	GCA_001698085.1_00933	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016682.1	935248	935880
GCA_001698085.1	GCA_001698085.1_00934	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016682.1	936284	937522
GCA_001698085.1	GCA_001698085.1_01055	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016682.1	1072487	1073392
GCA_001698085.1	GCA_001698085.1_01803	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016682.1	1836849	1838228
GCA_027672805.1	GCA_027672805.1_01768	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQDXS010000009.1	11253	13172
GCA_022221345.1	GCA_022221345.1_00751	inhA2	M6 family metalloprotease immune inhibitor InhA2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	799	799	100.00	100.00	799	AAP24685.1	M6 family metalloprotease immune inhibitor InhA2	NA	NA	CP076225.1	689491	691890
GCA_022221345.1	GCA_022221345.1_00756	cerA	phospholipase CerA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	283	100.00	98.59	283	AAS39677.1	phospholipase CerA	NA	NA	CP076225.1	695755	696606
GCA_022221345.1	GCA_022221345.1_00757	sph	sphingomyelinase C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	333	338	98.52	99.70	333	AAP24691.1	sphingomyelinase C	NA	NA	CP076225.1	696680	697681
GCA_022221345.1	GCA_022221345.1_01348	inhA1	M6 family metalloprotease immune inhibitor InhA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	795	796	100.00	96.61	796	ADH05944.1	M6 family metalloprotease immune inhibitor InhA1	NA	NA	CP076225.1	1240975	1243362
GCA_022221345.1	GCA_022221345.1_01648	mphL	macrolide 2-phosphotransferase MphL	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	298	303	98.02	87.21	297	WP_002047670.1	macrolide 2-phosphotransferase MphL	NF038057.1	macrolide 2-phosphotransferase MphL	CP076225.1	1495720	1496616
GCA_022221345.1	GCA_022221345.1_01948	nheA	non-hemolytic enterotoxin NHE subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	386	386	100.00	97.93	386	AAS40892.1	non-hemolytic enterotoxin NHE subunit A	NA	NA	CP076225.1	1771242	1772402
GCA_022221345.1	GCA_022221345.1_01949	nheB	non-hemolytic enterotoxin NHE subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	402	402	100.00	98.51	402	AAS40893.1	non-hemolytic enterotoxin NHE subunit B	NA	NA	CP076225.1	1772434	1773642
GCA_022221345.1	GCA_022221345.1_02012	entFM	enterotoxin EntFM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	420	421	100.00	98.81	421	AFH83235.1	enterotoxin EntFM	NF040678.1	enterotoxin EntFM	CP076225.1	1838634	1839896
GCA_022221345.1	GCA_022221345.1_02100	fosB	FosBx1 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	138	100.00	89.13	138	WP_000943772.1	FosBx1 family fosfomycin resistance bacillithiol transferase	NF041541.1	FosBx1 family fosfomycin resistance bacillithiol transferase	CP076225.1	1916969	1917385
GCA_022221345.1	GCA_022221345.1_02459	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	219	98.63	57.87	216	WP_087344902.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP076225.1	2247424	2248074
GCA_022221345.1	GCA_022221345.1_02548	bla	class A beta-lactamase Bla1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	306	309	99.03	99.67	306	WP_011053164.1	class A beta-lactamase Bla1	NF033096.1	class A beta-lactamase Bla1	CP076225.1	2329080	2330000
GCA_022221345.1	GCA_022221345.1_02573	hlyII	hemolysin II HlyII	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	240	412	58.25	96.25	240	AAP10457.1	hemolysin II HlyII	NA	NA	CP076225.1	2353583	2354305
GCA_022221345.1	GCA_022221345.1_02574	hlyIIR	hemolysin II regulator HlyIIR	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	201	201	100.00	99.50	201	AAO74585.1	hemolysin II regulator HlyIIR	NA	NA	CP076225.1	2354836	2355441
GCA_022221345.1	GCA_022221345.1_02575	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	82.52	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP076225.1	2355583	2357061
GCA_022221345.1	GCA_022221345.1_02676	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	210	210	98.10	66.67	207	WP_071218948.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP076225.1	2448415	2449047
GCA_022221345.1	GCA_022221345.1_03209	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	184	184	100.00	100.00	184	WP_000054744.1	streptothricin N-acetyltransferase SatA	NA	NA	CP076225.1	2934351	2934905
GCA_022221345.1	GCA_022221345.1_03362	alo	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	512	512	100.00	99.80	512	AAP27127.1	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	NA	NA	CP076225.1	3087312	3088850
GCA_022221345.1	GCA_022221345.1_03504	bla2	BcII family subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	EXACTP	256	256	100.00	100.00	256	WP_000799223.1	BcII family subclass B1 metallo-beta-lactamase	NF033095.1	BcII family subclass B1 metallo-beta-lactamase	CP076225.1	3217848	3218618
GCA_022221345.1	GCA_022221345.1_03872	plcA	phosphatidylinositol diacylglycerol-lyase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	329	329	100.00	100.00	329	AAP27624.1	phosphatidylinositol diacylglycerol-lyase	NA	NA	CP076225.1	3558667	3559656
GCA_022221345.1	GCA_022221345.1_04090	fosB2	fosfomycin resistance bacillithiol transferase FosB2	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_000938987.1	fosfomycin resistance bacillithiol transferase FosB2	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP076225.1	3779226	3779645
GCA_022221345.1	GCA_022221345.1_05563	plcR	transcriptional regulator PlcR	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	213	285	74.74	98.12	213	AAT61178.1	transcriptional regulator PlcR	NA	NA	CP076225.1	5083422	5084063
GCA_022221345.1	GCA_022221345.1_05819	hasA	hyaluronan synthase HasA	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	366	427	85.71	99.73	366	KHA45933.1	hyaluronan synthase HasA	NA	NA	CP076226.1	111540	112640
GCA_022221345.1	GCA_022221345.1_05831	cya	anthrax toxin edema factor	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	800	800	100.00	99.88	800	AJG68144.1	anthrax toxin edema factor	NA	NA	CP076226.1	122724	125126
GCA_022221345.1	GCA_022221345.1_05836	atxA	anthrax toxin expression trans-acting transcriptional regulator AtxA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	475	475	100.00	100.00	475	AAD32423.1	anthrax toxin expression trans-acting transcriptional regulator AtxA	NA	NA	CP076226.1	127881	129308
GCA_022221345.1	GCA_022221345.1_05846	pagA	anthrax toxin protective antigen	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	764	764	100.00	99.74	764	AAD32414.1	anthrax toxin protective antigen	NA	NA	CP076226.1	143889	146183
GCA_022221345.1	GCA_022221345.1_05851	lef	anthrax toxin lethal factor	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	809	809	100.00	100.00	809	AAM26117.1	anthrax toxin lethal factor	NA	NA	CP076226.1	149476	151905
GCA_022221345.1	GCA_022221345.1_05970	capB	capsule biosynthesis protein CapB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	464	464	100.00	100.00	464	AAF13663.1	capsule biosynthesis protein CapB	NA	NA	CP076227.1	71532	72926
GCA_022221345.1	GCA_022221345.1_05971	capC	capsular polyglutamate amide ligase/translocase CapC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	149	149	100.00	100.00	149	AAM26221.1	capsular polyglutamate amide ligase/translocase CapC	NA	NA	CP076227.1	72941	73390
GCA_022221345.1	GCA_022221345.1_05972	capA	capsular polyglutamate synthetase CapA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	411	411	100.00	100.00	411	AAM26220.1	capsular polyglutamate synthetase CapA	NA	NA	CP076227.1	73402	74637
GCA_022221345.1	GCA_022221345.1_05973	capD	capsule biosynthesis gamma-glutamyltransferase CapD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	528	528	100.00	100.00	528	AAM26219.1	capsule biosynthesis gamma-glutamyltransferase CapD	NA	NA	CP076227.1	74634	76220
GCA_022221345.1	GCA_022221345.1_05974	capE	capsule biosynthesis protein CapE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	47	47	100.00	100.00	47	AAF13659.1	capsule biosynthesis protein CapE	NA	NA	CP076227.1	76235	76378
GCA_004117035.1	GCA_004117035.1_00423	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP026367.1	392718	394010
GCA_004117035.1	GCA_004117035.1_02418	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP026367.1	2423950	2424591
GCA_030228895.1	GCA_030228895.1_01586	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPIV010000004.1	69982	70836
GCA_002005545.1	GCA_002005545.1_00306	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	LBMT01000001.1	304608	305102
GCA_002005545.1	GCA_002005545.1_00934	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LBMT01000001.1	899638	901557
GCA_002005545.1	GCA_002005545.1_00935	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	LBMT01000001.1	902482	903219
GCA_002005545.1	GCA_002005545.1_01235	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	LBMT01000001.1	1227731	1228930
GCA_002005545.1	GCA_002005545.1_01438	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	LBMT01000001.1	1446068	1447285
GCA_002005545.1	GCA_002005545.1_01439	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	LBMT01000001.1	1447405	1448868
GCA_005890465.1	GCA_005890465.1_00390	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	100.00	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQE01000115.1	22958	24091
GCA_000615405.1	GCA_000615405.1_00740	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	131	121	100.00	50.37	135	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BALX01000017.1	14276	14671
GCA_030232245.1	GCA_030232245.1_00431	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	98.83	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JASPJH010000015.1	8789	10330
GCA_030232245.1	GCA_030232245.1_00443	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJH010000015.1	26096	26950
GCA_030232245.1	GCA_030232245.1_01088	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPJH010000028.1	2983	4425
GCA_030232245.1	GCA_030232245.1_01361	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPJH010000033.1	1375	2550
GCA_947253115.1	GCA_947253115.1_00352	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAMXYO010000005.1	12665	14584
GCA_003942595.1	GCA_003942595.1_02410	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJNL01000013.1	21963	23180
GCA_003942595.1	GCA_003942595.1_02411	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJNL01000013.1	23300	24763
GCA_001588735.1	GCA_001588735.1_01655	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LAVY01000004.1	16229	18148
GCA_025146775.1	GCA_025146775.1_02516	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.56	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP102259.1	3418197	3419078
GCA_025146775.1	GCA_025146775.1_03933	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	91.87	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP102259.1	5121670	5123001
GCA_001679455.1	GCA_001679455.1_01294	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LZMY01000012.1	440157	440579
GCA_003493855.1	GCA_003493855.1_01597	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.87	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQJN01000008.1	68558	69796
GCA_003493855.1	GCA_003493855.1_01598	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	96.19	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQJN01000008.1	69813	70676
GCA_003493855.1	GCA_003493855.1_01807	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.24	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQJN01000011.1	47873	49399
GCA_938045125.1	GCA_938045125.1_01891	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CALINX010000069.1	8186	8614
GCA_938045125.1	GCA_938045125.1_01995	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.39	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CALINX010000072.1	13672	15396
GCA_938045125.1	GCA_938045125.1_01996	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CALINX010000072.1	15398	17134
GCA_009717625.1	GCA_009717625.1_00366	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.39	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	WMYX01000001.1	120024	121502
GCA_009717625.1	GCA_009717625.1_00637	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	WMYX01000001.1	415612	417531
GCA_009717625.1	GCA_009717625.1_00669	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMYX01000001.1	444565	446289
GCA_009717625.1	GCA_009717625.1_00670	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMYX01000001.1	446291	448027
GCA_009717625.1	GCA_009717625.1_02254	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYX01000009.1	17923	19386
GCA_009717625.1	GCA_009717625.1_02255	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYX01000009.1	19506	20723
GCA_003603405.1	GCA_003603405.1_00010	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.99	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	QTND01000001.1	7505	9229
GCA_003603405.1	GCA_003603405.1_00011	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	92.04	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	QTND01000001.1	9231	10967
GCA_003603405.1	GCA_003603405.1_00230	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	QTND01000001.1	250690	251118
GCA_003603405.1	GCA_003603405.1_00390	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	QTND01000001.1	410367	411584
GCA_003603405.1	GCA_003603405.1_00391	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	QTND01000001.1	411704	413167
GCA_003603405.1	GCA_003603405.1_00403	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	QTND01000001.1	421188	421616
GCA_003603405.1	GCA_003603405.1_01197	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	QTND01000002.1	292201	292938
GCA_000212555.2	GCA_000212555.2_00966	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AFGT01000002.1	137053	138270
GCA_000212555.2	GCA_000212555.2_02222	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AFGT01000001.1	897511	899301
GCA_009771085.1	GCA_009771085.1_00854	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	594	639	92.96	99.49	594	WP_014636291.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	WNXU01000036.1	398	2182
GCA_018367615.1	GCA_018367615.1_00857	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAGZFU010000038.1	10744	11172
GCA_018367615.1	GCA_018367615.1_00897	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	96.52	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAGZFU010000040.1	8076	9800
GCA_018367615.1	GCA_018367615.1_00898	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.11	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAGZFU010000040.1	9802	11538
GCA_024104505.1	GCA_024104505.1_00980	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHAVK010000001.1	565429	565848
GCA_024104505.1	GCA_024104505.1_01287	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHAVK010000027.1	2727	4733
GCA_024104505.1	GCA_024104505.1_01850	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHAVK010000003.1	162846	164138
GCA_024104505.1	GCA_024104505.1_02163	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHAVK010000005.1	137374	138447
GCA_000017085.1	GCA_000017085.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP000730.1	39127	41133
GCA_000017085.1	GCA_000017085.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP000730.1	41233	42219
GCA_000017085.1	GCA_000017085.1_00144	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP000730.1	157679	159037
GCA_000017085.1	GCA_000017085.1_00350	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP000730.1	387348	388703
GCA_000017085.1	GCA_000017085.1_00388	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP000730.1	421932	422543
GCA_000017085.1	GCA_000017085.1_00867	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.11	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP000730.1	897252	897980
GCA_000017085.1	GCA_000017085.1_00868	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.52	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP000730.1	898004	898732
GCA_000017085.1	GCA_000017085.1_01488	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP000730.1	1560117	1561094
GCA_000017085.1	GCA_000017085.1_01489	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP000730.1	1561096	1562034
GCA_000017085.1	GCA_000017085.1_01664	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP000730.1	1708757	1709509
GCA_000017085.1	GCA_000017085.1_01837	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP000730.1	1901841	1903133
GCA_000017085.1	GCA_000017085.1_01881	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP000730.1	1940374	1941090
GCA_000017085.1	GCA_000017085.1_01884	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP000730.1	1942865	1943587
GCA_000017085.1	GCA_000017085.1_01885	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP000730.1	1943712	1944419
GCA_000017085.1	GCA_000017085.1_01895	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP000730.1	1956068	1957051
GCA_000017085.1	GCA_000017085.1_01896	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP000730.1	1957053	1957988
GCA_000017085.1	GCA_000017085.1_02055	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP000730.1	2086499	2086849
GCA_000017085.1	GCA_000017085.1_02060	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP000730.1	2089063	2089554
GCA_000017085.1	GCA_000017085.1_02137	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP000730.1	2147209	2147343
GCA_000017085.1	GCA_000017085.1_02285	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.58	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP000730.1	2299393	2300835
GCA_000017085.1	GCA_000017085.1_02460	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP000730.1	2452583	2453002
GCA_000017085.1	GCA_000017085.1_02547	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP000730.1	2542241	2543206
GCA_000017085.1	GCA_000017085.1_02548	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP000730.1	2543773	2544720
GCA_000017085.1	GCA_000017085.1_02549	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP000730.1	2544722	2545699
GCA_000017085.1	GCA_000017085.1_02771	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP000730.1	2784258	2785787
GCA_000017085.1	GCA_000017085.1_02805	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP000730.1	2829120	2830172
GCA_000017085.1	GCA_000017085.1_02863	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP000731.1	4500	5117
GCA_000017085.1	GCA_000017085.1_02869	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733287.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP000731.1	7916	8761
GCA_000017085.1	GCA_000017085.1_02870	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP000731.1	8868	10625
GCA_000017085.1	GCA_000017085.1_02871	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP000731.1	10615	10995
GCA_000017085.1	GCA_000017085.1_02876	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP000731.1	14197	14991
GCA_000017085.1	GCA_000017085.1_02877	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	176	180	100.00	97.78	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP000731.1	15084	15614
GCA_000017085.1	GCA_000017085.1_02886	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP000731.1	21544	23010
GCA_000017085.1	GCA_000017085.1_02887	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP000731.1	23109	24008
GCA_003989305.1	GCA_003989305.1_00005	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RBLV01000010.1	4570	5424
GCA_003609775.1	GCA_003609775.1_00096	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	AP018049.1	121200	122390
GCA_003609775.1	GCA_003609775.1_00110	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	AP018049.1	141041	142006
GCA_003609775.1	GCA_003609775.1_01981	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	AP018050.1	752452	753417
GCA_003609775.1	GCA_003609775.1_01989	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	AP018050.1	762585	763550
GCA_003609775.1	GCA_003609775.1_02017	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	AP018050.1	791660	792625
GCA_019856215.1	GCA_019856215.1_01750	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	BLASTP	264	264	100.00	99.62	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP082153.1	1734129	1734923
GCA_000817005.1	GCA_000817005.1_00960	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	261	245	100.00	100.00	245	WP_011861426.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP007593.1	960658	961443
GCA_000817005.1	GCA_000817005.1_00961	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP007593.1	961781	962323
GCA_000817005.1	GCA_000817005.1_00962	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP007593.1	962416	963210
GCA_000817005.1	GCA_000817005.1_00968	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP007593.1	966327	967064
GCA_000817005.1	GCA_000817005.1_00979	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP007593.1	976981	978900
GCA_000817005.1	GCA_000817005.1_01354	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP007593.1	1334399	1335598
GCA_007097455.1	GCA_007097455.1_01136	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VKDG01000020.1	737	1591
GCA_015476095.1	GCA_015476095.1_02061	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	111	107	96.26	54.29	105	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP064303.1	2099392	2099727
GCA_003977605.1	GCA_003977605.1_01074	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	RYYU01000001.1	1173215	1174180
GCA_003977605.1	GCA_003977605.1_01509	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	RYYU01000001.1	1687803	1689728
GCA_003469915.1	GCA_003469915.1_01819	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	QSKN01000005.1	114377	115114
GCA_003469915.1	GCA_003469915.1_01830	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	QSKN01000005.1	125029	126948
GCA_003970495.1	GCA_003970495.1_00213	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	RXWW01000093.1	7520	7939
GCA_003970495.1	GCA_003970495.1_00436	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	98.86	53.31	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	RXWW01000002.1	22725	23792
GCA_003970495.1	GCA_003970495.1_01014	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	RXWW01000030.1	31274	32566
GCA_003970495.1	GCA_003970495.1_02173	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	RXWW01000065.1	13046	13891
GCA_003970495.1	GCA_003970495.1_02174	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	583	585	100.00	87.86	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	RXWW01000065.1	13998	15749
GCA_003970495.1	GCA_003970495.1_02175	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	RXWW01000065.1	15739	16119
GCA_014635765.1	GCA_014635765.1_01538	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	BMDL01000002.1	576077	577150
GCA_014635765.1	GCA_014635765.1_01589	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	BMDL01000002.1	636348	636770
GCA_014635765.1	GCA_014635765.1_02138	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BMDL01000004.1	143405	143752
GCA_014635765.1	GCA_014635765.1_02142	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BMDL01000004.1	147435	148727
GCA_014635765.1	GCA_014635765.1_02143	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	BMDL01000004.1	148744	149139
GCA_014635765.1	GCA_014635765.1_02206	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BMDL01000005.1	60756	62045
GCA_000835975.1	GCA_000835975.1_01593	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	131	121	100.00	50.37	135	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BBSI01000022.1	255286	255681
GCA_023169925.1	GCA_023169925.1_02367	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.10	46.40	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AP025590.1	2822237	2823661
GCA_000477955.1	GCA_000477955.1_00771	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	KI515717.1	78901	80076
GCA_000477955.1	GCA_000477955.1_00793	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	KI515717.1	102929	103780
GCA_000477955.1	GCA_000477955.1_00802	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515717.1	111662	112516
GCA_001896085.1	GCA_001896085.1_01098	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP018138.1	1054366	1054794
GCA_001896085.1	GCA_001896085.1_01191	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP018138.1	1134548	1135747
GCA_001896085.1	GCA_001896085.1_01835	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP018138.1	1746503	1747240
GCA_001896085.1	GCA_001896085.1_01846	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP018138.1	1757097	1759016
GCA_001896085.1	GCA_001896085.1_01851	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP018138.1	1760742	1762205
GCA_001896085.1	GCA_001896085.1_01852	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP018138.1	1762325	1763542
GCA_001810515.1	GCA_001810515.1_00064	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV801759.1	58052	59692
GCA_001810515.1	GCA_001810515.1_01484	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	639	100.00	98.28	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV801797.1	7477	9399
GCA_001810515.1	GCA_001810515.1_01487	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV801797.1	11415	12269
GCA_019703755.1	GCA_019703755.1_01718	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018781.1	1690837	1692231
GCA_009717265.1	GCA_009717265.1_00837	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYG01000002.1	308513	309730
GCA_009717265.1	GCA_009717265.1_00838	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYG01000002.1	309850	311313
GCA_009717265.1	GCA_009717265.1_00843	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMYG01000002.1	313180	313608
GCA_030232605.1	GCA_030232605.1_00089	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPFX010000014.1	1412	2266
GCA_001809595.1	GCA_001809595.1_01011	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.73	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	KV798101.1	36671	38050
GCA_003495835.1	GCA_003495835.1_00879	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQDU01000003.1	76614	77519
GCA_003495835.1	GCA_003495835.1_01030	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.90	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQDU01000004.1	18190	19428
GCA_003495835.1	GCA_003495835.1_01031	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	96.19	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQDU01000004.1	19676	20308
GCA_003495835.1	GCA_003495835.1_01033	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQDU01000004.1	21100	22668
GCA_003495835.1	GCA_003495835.1_01985	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQDU01000009.1	48895	50421
GCA_006715585.1	GCA_006715585.1_01109	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	392	94.90	62.43	378	WP_003971483.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	VFNN01000001.1	1165379	1166554
GCA_006715585.1	GCA_006715585.1_01445	tet(V)	tetracycline efflux MFS transporter Tet(V)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	417	419	97.85	68.29	410	WP_003896589.1	tetracycline efflux MFS transporter Tet(V)	NF012178.0	tetracycline efflux MFS transporter Tet(V)	VFNN01000001.1	1527433	1528686
GCA_006715585.1	GCA_006715585.1_04679	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	293	97.95	66.21	293	WP_011728509.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	VFNN01000001.1	4846006	4846917
GCA_005796055.1	GCA_005796055.1_01689	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	VBRS01000039.1	2054	2464
GCA_016728625.1	GCA_016728625.1_00478	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP068160.1	542905	543759
GCA_946891925.1	GCA_946891925.1_01399	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.43	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAMPNI010000029.1	331	1809
GCA_030216405.1	GCA_030216405.1_00463	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	JASOLC010000019.1	16560	17939
GCA_916050295.1	GCA_916050295.1_01065	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CAJZKM010000038.1	5956	6750
GCA_000287695.1	GCA_000287695.1_00657	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_003505402.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	ALJM01000014.1	4060	5979
GCA_000027165.1	GCA_000027165.1_00916	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FN568063.1	839113	840753
GCA_000027165.1	GCA_000027165.1_01009	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.74	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	FN568063.1	925334	926533
GCA_000027165.1	GCA_000027165.1_01156	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	FN568063.1	1099168	1099596
GCA_000027165.1	GCA_000027165.1_01391	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	FN568063.1	1338792	1340711
GCA_000027165.1	GCA_000027165.1_01779	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	FN568063.1	1757276	1758715
GCA_000027165.1	GCA_000027165.1_01784	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	FN568063.1	1760624	1761418
GCA_000027165.1	GCA_000027165.1_01785	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	FN568063.1	1761511	1762053
GCA_000027165.1	GCA_000027165.1_01786	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255864.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	FN568063.1	1762050	1762958
GCA_902373445.1	GCA_902373445.1_00992	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	480	631	76.07	98.33	480	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABKMF010000035.1	17133	18575
GCA_916700545.1	GCA_916700545.1_00879	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAKAKN010000001.1	853190	854653
GCA_916700545.1	GCA_916700545.1_00880	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAKAKN010000001.1	854773	855990
GCA_916700545.1	GCA_916700545.1_01173	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691746.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAKAKN010000002.1	119622	121541
GCA_916700545.1	GCA_916700545.1_01174	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CAKAKN010000002.1	122648	123385
GCA_000023925.1	GCA_000023925.1_02376	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	394	391	97.95	66.41	384	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	CP001686.1	2462549	2463733
GCA_000023925.1	GCA_000023925.1_02560	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.19	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP001686.1	2633925	2635349
GCA_000023925.1	GCA_000023925.1_02561	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	216	218	87.61	46.35	192	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP001686.1	2635370	2636020
GCA_002860885.1	GCA_002860885.1_00181	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	PKIF01000001.1	187275	188492
GCA_002860885.1	GCA_002860885.1_00182	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	PKIF01000001.1	188612	190075
GCA_002860885.1	GCA_002860885.1_01746	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PKIF01000004.1	19981	21876
GCA_901482445.1	GCA_901482445.1_00938	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	LR590477.1	1012009	1012914
GCA_901482445.1	GCA_901482445.1_01068	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	418	412	100.00	94.50	418	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	LR590477.1	1171388	1172644
GCA_901482445.1	GCA_901482445.1_01069	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.14	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	LR590477.1	1172661	1173524
GCA_901482445.1	GCA_901482445.1_01257	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.85	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	LR590477.1	1369498	1371024
GCA_013276675.1	GCA_013276675.1_00104	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMLL01000103.1	6168	7589
GCA_013276675.1	GCA_013276675.1_01651	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMLL01000006.1	26356	28275
GCA_013276675.1	GCA_013276675.1_01688	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	VMLL01000006.1	59084	60547
GCA_013276675.1	GCA_013276675.1_01689	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	VMLL01000006.1	60568	61785
GCA_900459415.1	GCA_900459415.1_01140	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	UHFU01000006.1	999222	1001141
GCA_900459415.1	GCA_900459415.1_01151	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	UHFU01000006.1	1011056	1011793
GCA_902509525.1	GCA_902509525.1_00033	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LR735432.1	37670	39676
GCA_902509525.1	GCA_902509525.1_00034	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	LR735432.1	39776	41533
GCA_902509525.1	GCA_902509525.1_00035	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	LR735432.1	41533	41904
GCA_902509525.1	GCA_902509525.1_00044	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	LR735432.1	48641	49372
GCA_902509525.1	GCA_902509525.1_00045	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	LR735432.1	49498	50280
GCA_902509525.1	GCA_902509525.1_00122	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	432	429	100.00	90.68	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR735432.1	126993	128291
GCA_902509525.1	GCA_902509525.1_00125	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LR735432.1	130460	130807
GCA_902509525.1	GCA_902509525.1_00199	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	LR735432.1	220669	221097
GCA_902509525.1	GCA_902509525.1_00251	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	LR735432.1	278685	279752
GCA_902509525.1	GCA_902509525.1_00953	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	LR735432.1	1002158	1003597
GCA_902509525.1	GCA_902509525.1_00957	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	LR735432.1	1006412	1006897
GCA_902509525.1	GCA_902509525.1_01074	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LR735432.1	1089886	1090731
GCA_902509525.1	GCA_902509525.1_01075	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LR735432.1	1090838	1092595
GCA_902509525.1	GCA_902509525.1_01076	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LR735432.1	1092585	1092965
GCA_902509525.1	GCA_902509525.1_01233	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	LR735432.1	1216326	1217108
GCA_902509525.1	GCA_902509525.1_01234	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	LR735432.1	1217234	1217965
GCA_902509525.1	GCA_902509525.1_01360	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	LR735432.1	1362753	1363535
GCA_902509525.1	GCA_902509525.1_02355	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR735432.1	2395883	2397175
GCA_902509525.1	GCA_902509525.1_02592	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	LR735433.1	16981	17889
GCA_902509525.1	GCA_902509525.1_02593	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	LR735433.1	17886	18428
GCA_902509525.1	GCA_902509525.1_02594	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	LR735433.1	18521	19315
GCA_902509525.1	GCA_902509525.1_02599	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LR735433.1	22225	22605
GCA_902509525.1	GCA_902509525.1_02600	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LR735433.1	22595	24352
GCA_902509525.1	GCA_902509525.1_02601	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LR735433.1	24459	25304
GCA_028527805.1	GCA_028527805.1_00592	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JAQPSP010000011.1	24973	25824
GCA_028527805.1	GCA_028527805.1_01977	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQPSP010000008.1	1112	1966
GCA_900458605.1	GCA_900458605.1_00165	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	UHDF01000003.1	109805	110140
GCA_900458605.1	GCA_900458605.1_00166	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	547	547	100.00	99.82	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UHDF01000003.1	110198	111841
GCA_900458605.1	GCA_900458605.1_00167	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	UHDF01000003.1	111923	112573
GCA_900458605.1	GCA_900458605.1_00204	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHDF01000003.1	146072	147361
GCA_900458605.1	GCA_900458605.1_00207	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UHDF01000003.1	149539	149886
GCA_900458605.1	GCA_900458605.1_00283	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	UHDF01000003.1	234850	235278
GCA_900458605.1	GCA_900458605.1_00999	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	464	585	79.32	98.92	464	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	UHDF01000003.1	956545	957939
GCA_900458605.1	GCA_900458605.1_01000	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	UHDF01000003.1	957929	958309
GCA_900458605.1	GCA_900458605.1_01009	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	UHDF01000003.1	964290	965135
GCA_900458605.1	GCA_900458605.1_01010	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	UHDF01000003.1	965242	966999
GCA_900458605.1	GCA_900458605.1_01011	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	UHDF01000003.1	966989	967369
GCA_018726805.1	GCA_018726805.1_00368	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.68	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	JAHCSY010000001.1	378742	381591
GCA_018726805.1	GCA_018726805.1_04125	blaOXA	OXA-22 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	275	274	99.64	96.70	273	WP_063861776.1	benzylpenicillin-hydrolyzing class D beta-lactamase OXA-22	NF033509.1	OXA-22 family class D beta-lactamase	JAHCSY010000002.1	778024	778851
GCA_018726805.1	GCA_018726805.1_04284	blaOXA	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	271	271	100.00	98.15	271	WP_063864500.1	carbapenem-hydrolyzing class D beta-lactamase OXA-60	NF000395.3	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	JAHCSY010000002.1	952078	952893
GCA_029623735.1	GCA_029623735.1_00791	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP121104.1	728120	729514
GCA_029623735.1	GCA_029623735.1_01103	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP121104.1	1058607	1059824
GCA_029623735.1	GCA_029623735.1_01104	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP121104.1	1059944	1061407
GCA_029623735.1	GCA_029623735.1_01120	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP121104.1	1070468	1071328
GCA_024138775.1	GCA_024138775.1_00383	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP071874.1	404807	406231
GCA_900478045.1	GCA_900478045.1_00669	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LS483460.1	725877	727301
GCA_017167735.1	GCA_017167735.1_01055	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFDPI010000002.1	7367	8791
GCA_009496045.1	GCA_009496045.1_01014	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJX01000003.1	169739	170938
GCA_021460215.1	GCA_021460215.1_00999	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP086131.1	586579	588498
GCA_026783065.1	GCA_026783065.1_00244	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKUXQ010000001.1	252372	254030
GCA_002093995.1	GCA_002093995.1_00247	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LXOR01000006.1	241599	243518
GCA_002093995.1	GCA_002093995.1_00248	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	LXOR01000006.1	244625	245362
GCA_019391815.1	GCA_019391815.1_00654	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	392	321	93.15	97.99	299	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXRA010000016.1	80712	81890
GCA_019391815.1	GCA_019391815.1_00714	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	199	321	61.99	100.00	199	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NA	NA	JAHXRA010000018.1	52	651
GCA_019391815.1	GCA_019391815.1_02432	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXRA010000007.1	62416	63606
GCA_025149385.1	GCA_025149385.1_01031	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.69	41.40	471	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXSM010000184.1	532	1926
GCA_025149385.1	GCA_025149385.1_01744	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	561	83.24	42.74	475	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXSM010000032.1	28970	30370
GCA_016861285.1	GCA_016861285.1_01227	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.77	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP024414.1	1220694	1222088
GCA_016861285.1	GCA_016861285.1_01550	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	97.56	43.33	120	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP024414.1	1509529	1509894
GCA_003838285.1	GCA_003838285.1_01974	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	336	263	100.00	100.00	263	WP_001206316.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	QXEM01000049.1	406	1416
GCA_008726455.1	GCA_008726455.1_01575	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VYVQ01000042.1	3624	5405
GCA_008726455.1	GCA_008726455.1_01579	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VYVQ01000042.1	8918	10699
GCA_008726455.1	GCA_008726455.1_01933	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.13	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VYVQ01000007.1	16904	17758
GCA_019703575.1	GCA_019703575.1_01544	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018772.1	1571918	1573312
GCA_000226155.1	GCA_000226155.1_00434	mexA	multidrug efflux RND transporter periplasmic adaptor subunit MexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	383	383	100.00	100.00	383	AAA74436.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	NF033834.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	CP002496.1	465548	466699
GCA_000226155.1	GCA_000226155.1_00850	aph(3)-IIb	aminoglycoside O-phosphotransferase APH(3)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	PARTIALP	347	268	64.55	99.42	173	WP_003113011.1	aminoglycoside O-phosphotransferase APH(3)-IIb	NA	NA	CP002496.1	900935	901978
GCA_000226155.1	GCA_000226155.1_00859	blaPDC-5	extended-spectrum class C beta-lactamase PDC-5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	397	397	100.00	100.00	397	WP_003119095.1	extended-spectrum class C beta-lactamase PDC-5	NF000422.6	PDC family class C beta-lactamase	CP002496.1	914096	915289
GCA_000226155.1	GCA_000226155.1_02689	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	414	414	100.00	100.00	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP002496.1	2788984	2790228
GCA_000226155.1	GCA_000226155.1_03193	mexX	multidrug efflux RND transporter periplasmic adaptor subunit MexX	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	396	396	100.00	99.24	396	AAF14522.1	multidrug efflux RND transporter periplasmic adaptor subunit MexX	NA	NA	CP002496.1	3373141	3374331
GCA_000226155.1	GCA_000226155.1_04095	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	135	135	100.00	99.26	135	WP_003082280.1	FosA family fosfomycin resistance glutathione transferase	NF000094.1	FosA family fosfomycin resistance glutathione transferase	CP002496.1	4336054	4336461
GCA_000226155.1	GCA_000226155.1_04536	catB7	type B-4 chloramphenicol O-acetyltransferase CatB7	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	212	212	100.00	98.11	212	WP_003112709.1	type B-4 chloramphenicol O-acetyltransferase CatB7	NF000490.1	type B chloramphenicol O-acetyltransferase	CP002496.1	4774055	4774693
GCA_000226155.1	GCA_000226155.1_05903	blaOXA-851	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-851	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	262	262	100.00	100.00	262	WP_014603442.1	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-851	NF000432.2	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase	CP002496.1	6262196	6262984
GCA_010223175.1	GCA_010223175.1_00244	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	295	303	88.45	40.67	268	WP_041881964.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP027009.1	282768	283655
GCA_030408895.1	GCA_030408895.1_00840	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.10	45.01	471	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP047583.1	896059	897480
GCA_030408895.1	GCA_030408895.1_02127	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP047583.1	2279168	2280022
GCA_903797675.1	GCA_903797675.1_02791	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	302	97.02	52.70	296	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CAIGKA010000009.1	67298	68203
GCA_903797675.1	GCA_903797675.1_04651	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	239	275	85.82	65.68	236	WP_117407753.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CAIGKA010000027.1	30980	31699
GCA_903797675.1	GCA_903797675.1_04861	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	93.59	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CAIGKA010000034.1	8876	9112
GCA_903797675.1	GCA_903797675.1_04862	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CAIGKA010000034.1	9109	9474
GCA_903797675.1	GCA_903797675.1_04863	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	99.47	89.78	558	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAIGKA010000034.1	9492	11174
GCA_903797675.1	GCA_903797675.1_04864	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	135	140	98.57	78.99	138	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CAIGKA010000034.1	11213	11620
GCA_903797675.1	GCA_903797675.1_04865	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	94.51	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CAIGKA010000034.1	11648	11923
GCA_903797675.1	GCA_903797675.1_04866	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CAIGKA010000034.1	11939	12289
GCA_903797675.1	GCA_903797675.1_04867	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CAIGKA010000034.1	12361	12816
GCA_963394865.1	GCA_963394865.1_00127	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.24	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPH010000001.1	116340	117866
GCA_963394865.1	GCA_963394865.1_00736	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJPH010000006.1	90079	90711
GCA_963394865.1	GCA_963394865.1_00737	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPH010000006.1	90961	92199
GCA_963394865.1	GCA_963394865.1_01003	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPH010000010.1	29130	30509
GCA_001811145.1	GCA_001811145.1_01509	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV803683.1	35623	36477
GCA_001811145.1	GCA_001811145.1_01677	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV803686.1	58319	59743
GCA_027625375.1	GCA_027625375.1_01403	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP115182.1	1446690	1448378
GCA_027625375.1	GCA_027625375.1_01404	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP115182.1	1448389	1448676
GCA_027625375.1	GCA_027625375.1_01469	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	94	91	97.80	62.92	89	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP115182.1	1503020	1503304
GCA_027625375.1	GCA_027625375.1_02381	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.57	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP115182.1	2424949	2427798
GCA_027625375.1	GCA_027625375.1_02384	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	PARTIALP	96	152	51.97	96.20	79	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	CP115182.1	2431321	2431611
GCA_027625375.1	GCA_027625375.1_02385	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	96.71	304	APX31172.1	heat resistance protein YfdX1	NA	NA	CP115182.1	2431650	2432564
GCA_027625375.1	GCA_027625375.1_02386	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	92.88	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP115182.1	2432667	2433554
GCA_027625375.1	GCA_027625375.1_02387	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	90.64	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CP115182.1	2433651	2434262
GCA_027625375.1	GCA_027625375.1_02389	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	94.52	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	CP115182.1	2435477	2435917
GCA_027625375.1	GCA_027625375.1_02392	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	PARTIALP	313	571	54.82	90.42	313	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	CP115182.1	2436700	2437641
GCA_027625375.1	GCA_027625375.1_02393	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	91.52	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	CP115182.1	2437638	2438135
GCA_030234045.1	GCA_030234045.1_00287	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPEM010000027.1	8034	8888
GCA_001875655.1	GCA_001875655.1_00088	dfrA51	trimethoprim-resistant dihydrofolate reductase DfrA51	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	158	158	100.00	100.00	158	WP_000781812.1	trimethoprim-resistant dihydrofolate reductase DfrA51	NF047324.1	trimethoprim-resistant dihydrofolate reductase DfrA51	MKEQ01000004.1	82286	82762
GCA_001875655.1	GCA_001875655.1_00403	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	141	141	99.29	79.29	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	MKEQ01000001.1	267655	268080
GCA_001875655.1	GCA_001875655.1_00797	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	225	217	94.01	66.34	205	WP_063843208.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	MKEQ01000001.1	697010	697687
GCA_001875655.1	GCA_001875655.1_00816	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	101	102	100.00	77.14	105	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	MKEQ01000001.1	717213	717518
GCA_001875655.1	GCA_001875655.1_01457	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	99.29	87.86	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	MKEQ01000001.1	1325123	1325554
GCA_001875655.1	GCA_001875655.1_02582	blaACT	ACT family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	191	381	50.13	100.00	191	WP_039272978.1	cephalosporin-hydrolyzing class C beta-lactamase ACT-37	NA	NA	MKEQ01000001.1	2456079	2456654
GCA_001875655.1	GCA_001875655.1_02766	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	EXACTP	143	143	100.00	100.00	143	AAD11743.1	silver-binding protein SilE	NA	NA	MKEQ01000001.1	2639632	2640063
GCA_001875655.1	GCA_001875655.1_02767	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	493	491	100.00	98.57	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	MKEQ01000001.1	2640308	2641789
GCA_001875655.1	GCA_001875655.1_02768	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	MKEQ01000001.1	2641782	2642462
GCA_001875655.1	GCA_001875655.1_02769	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.05	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	MKEQ01000001.1	2642652	2644037
GCA_001875655.1	GCA_001875655.1_02770	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	97.44	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	MKEQ01000001.1	2644065	2644418
GCA_001875655.1	GCA_001875655.1_02771	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	96.28	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	MKEQ01000001.1	2644532	2645824
GCA_001875655.1	GCA_001875655.1_02772	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.66	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	MKEQ01000001.1	2645835	2648981
GCA_001875655.1	GCA_001875655.1_02774	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	95.10	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	MKEQ01000001.1	2649634	2652081
GCA_001875655.1	GCA_001875655.1_02778	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.67	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	MKEQ01000001.1	2654063	2655880
GCA_001875655.1	GCA_001875655.1_02779	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	MKEQ01000001.1	2655880	2656776
GCA_001875655.1	GCA_001875655.1_02780	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	MKEQ01000001.1	2656816	2657196
GCA_001875655.1	GCA_001875655.1_02781	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	MKEQ01000001.1	2657201	2658130
GCA_001875655.1	GCA_001875655.1_02782	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	MKEQ01000001.1	2658185	2658865
GCA_001875655.1	GCA_001875655.1_02783	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	MKEQ01000001.1	2658862	2660262
GCA_001875655.1	GCA_001875655.1_02784	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	92.36	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	MKEQ01000001.1	2660480	2660914
GCA_001875655.1	GCA_001875655.1_03163	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	294	300	97.67	89.42	293	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	MKEQ01000001.1	3044488	3045372
GCA_001875655.1	GCA_001875655.1_03415	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	100.00	96.86	1050	WP_040224644.1	multidrug efflux RND transporter permease subunit OqxB27	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	MKEQ01000001.1	3306260	3309412
GCA_001875655.1	GCA_001875655.1_03914	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	MKEQ01000002.1	908	1288
GCA_001875655.1	GCA_001875655.1_03918	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	MKEQ01000002.1	2281	2961
GCA_001875655.1	GCA_001875655.1_03919	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	MKEQ01000002.1	2958	4358
GCA_001875655.1	GCA_001875655.1_03920	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	92.36	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	MKEQ01000002.1	4576	5010
GCA_006364675.1	GCA_006364675.1_00087	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP040998.1	89048	89800
GCA_006364675.1	GCA_006364675.1_01331	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP040998.1	1352259	1352870
GCA_006364675.1	GCA_006364675.1_01369	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP040998.1	1386045	1387400
GCA_006364675.1	GCA_006364675.1_01572	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP040998.1	1616856	1618214
GCA_006364675.1	GCA_006364675.1_01705	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP040998.1	1763226	1764278
GCA_006364675.1	GCA_006364675.1_01739	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP040998.1	1807612	1809141
GCA_006364675.1	GCA_006364675.1_01883	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1371	1115	61.43	99.12	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP040998.1	1966921	1971036
GCA_006364675.1	GCA_006364675.1_01959	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP040998.1	2048393	2049370
GCA_006364675.1	GCA_006364675.1_01960	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP040998.1	2049372	2050319
GCA_006364675.1	GCA_006364675.1_01961	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP040998.1	2050887	2051852
GCA_006364675.1	GCA_006364675.1_02048	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP040998.1	2141094	2141513
GCA_006364675.1	GCA_006364675.1_02223	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP040998.1	2293448	2294890
GCA_006364675.1	GCA_006364675.1_02373	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP040998.1	2449405	2449539
GCA_006364675.1	GCA_006364675.1_02547	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP040998.1	2595850	2596770
GCA_006364675.1	GCA_006364675.1_02548	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP040998.1	2596772	2597755
GCA_006364675.1	GCA_006364675.1_02558	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	99.57	235	ABD31004.1	serine protease SplA	NA	NA	CP040998.1	2609404	2610111
GCA_006364675.1	GCA_006364675.1_02559	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP040998.1	2610236	2610958
GCA_006364675.1	GCA_006364675.1_02562	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP040998.1	2612733	2613449
GCA_006364675.1	GCA_006364675.1_02604	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP040998.1	2650691	2651983
GCA_006364675.1	GCA_006364675.1_02710	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	CP040999.1	17082	18515
GCA_006364675.1	GCA_006364675.1_02719	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP040999.1	25476	25790
GCA_006364675.1	GCA_006364675.1_02720	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.53	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP040999.1	25790	27079
GCA_006364675.1	GCA_006364675.1_02725	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	284	459	61.87	100.00	284	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NA	NA	CP041000.1	2606	3460
GCA_022689235.1	GCA_022689235.1_00122	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	PARTIALP	465	514	87.74	99.33	451	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCXS010000013.1	36	1433
GCA_022689235.1	GCA_022689235.1_01243	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXS010000002.1	146001	147074
GCA_022689235.1	GCA_022689235.1_01392	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXS010000002.1	306632	307924
GCA_022689235.1	GCA_022689235.1_02061	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXS010000005.1	46711	47130
GCA_000560505.1	GCA_000560505.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	KK023463.1	39127	41133
GCA_000560505.1	GCA_000560505.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	KK023463.1	41233	42219
GCA_000560505.1	GCA_000560505.1_00143	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	KK023463.1	157736	159094
GCA_000560505.1	GCA_000560505.1_00346	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	KK023463.1	387405	388760
GCA_000560505.1	GCA_000560505.1_00384	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	KK023463.1	421989	422600
GCA_000560505.1	GCA_000560505.1_00863	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.11	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	KK023463.1	897434	898162
GCA_000560505.1	GCA_000560505.1_00864	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.52	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	KK023463.1	898186	898914
GCA_000560505.1	GCA_000560505.1_01485	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	KK023463.1	1560299	1561276
GCA_000560505.1	GCA_000560505.1_01486	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	KK023463.1	1561278	1562216
GCA_000560505.1	GCA_000560505.1_01661	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	KK023463.1	1708939	1709691
GCA_000560505.1	GCA_000560505.1_01834	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KK023463.1	1902022	1903314
GCA_000560505.1	GCA_000560505.1_01877	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	KK023463.1	1940556	1941272
GCA_000560505.1	GCA_000560505.1_01880	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	KK023463.1	1943047	1943769
GCA_000560505.1	GCA_000560505.1_01881	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	KK023463.1	1943894	1944601
GCA_000560505.1	GCA_000560505.1_01891	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	KK023463.1	1956250	1957233
GCA_000560505.1	GCA_000560505.1_01892	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	KK023463.1	1957235	1958170
GCA_000560505.1	GCA_000560505.1_02051	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	KK023463.1	2086682	2087032
GCA_000560505.1	GCA_000560505.1_02056	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	KK023463.1	2089246	2089737
GCA_000560505.1	GCA_000560505.1_02133	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	KK023463.1	2147393	2147527
GCA_000560505.1	GCA_000560505.1_02282	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.58	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	KK023463.1	2299677	2301119
GCA_000560505.1	GCA_000560505.1_02457	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	KK023463.1	2452867	2453286
GCA_000560505.1	GCA_000560505.1_02544	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	KK023463.1	2542910	2543875
GCA_000560505.1	GCA_000560505.1_02545	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	KK023463.1	2544442	2545389
GCA_000560505.1	GCA_000560505.1_02546	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	KK023463.1	2545391	2546368
GCA_000560505.1	GCA_000560505.1_02768	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	KK023463.1	2784545	2786074
GCA_000560505.1	GCA_000560505.1_02802	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KK023463.1	2829407	2830459
GCA_015274675.1	GCA_015274675.1_01574	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACGOU010000006.1	38393	40033
GCA_015274675.1	GCA_015274675.1_01653	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGOU010000007.1	36495	37787
GCA_015274675.1	GCA_015274675.1_02237	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGOU010000019.1	881	1726
GCA_015274675.1	GCA_015274675.1_02238	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGOU010000019.1	1833	3590
GCA_015274675.1	GCA_015274675.1_02239	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGOU010000019.1	3580	3960
GCA_015274675.1	GCA_015274675.1_02252	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGOU010000020.1	521	1813
GCA_015274675.1	GCA_015274675.1_02256	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACGOU010000020.1	5496	5843
GCA_015274675.1	GCA_015274675.1_02267	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACGOU010000021.1	5378	5749
GCA_015274675.1	GCA_015274675.1_02268	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACGOU010000021.1	5749	7506
GCA_015274675.1	GCA_015274675.1_02269	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACGOU010000021.1	7606	9612
GCA_015274675.1	GCA_015274675.1_02292	catA	type A-7 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	215	215	100.00	100.00	215	WP_002489529.1	type A-7 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JACGOU010000026.1	2264	2911
GCA_015274675.1	GCA_015274675.1_02295	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACGOU010000027.1	264	1007
GCA_015274675.1	GCA_015274675.1_02296	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACGOU010000027.1	1224	1628
GCA_016751935.1	GCA_016751935.1_00060	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	520	522	100.00	97.51	522	WP_032489639.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	JAEPJP010000005.1	140	1702
GCA_016751935.1	GCA_016751935.1_01415	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	98.86	53.60	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAEPJP010000001.1	1395172	1396239
GCA_016751935.1	GCA_016751935.1_01754	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.79	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAEPJP010000001.1	1767077	1768369
GCA_009912295.1	GCA_009912295.1_00416	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP047780.1	454140	454757
GCA_009912295.1	GCA_009912295.1_00439	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP047780.1	472590	472970
GCA_009912295.1	GCA_009912295.1_00441	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	332	585	56.75	98.80	332	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	CP047780.1	473242	474240
GCA_009912295.1	GCA_009912295.1_00443	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP047780.1	474823	475668
GCA_009912295.1	GCA_009912295.1_01166	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.56	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP047780.1	1197303	1198658
GCA_009912295.1	GCA_009912295.1_01369	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP047780.1	1428525	1429883
GCA_009912295.1	GCA_009912295.1_01490	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP047780.1	1562037	1563089
GCA_009912295.1	GCA_009912295.1_01525	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP047780.1	1604623	1606152
GCA_009912295.1	GCA_009912295.1_01747	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP047780.1	1844501	1845478
GCA_009912295.1	GCA_009912295.1_01748	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP047780.1	1845480	1846427
GCA_009912295.1	GCA_009912295.1_01749	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP047780.1	1846994	1847959
GCA_009912295.1	GCA_009912295.1_01836	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	98.56	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP047780.1	1938263	1938682
GCA_009912295.1	GCA_009912295.1_02003	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.38	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP047780.1	2083958	2085400
GCA_009912295.1	GCA_009912295.1_02149	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP047780.1	2235905	2236039
GCA_009912295.1	GCA_009912295.1_02165	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP047780.1	2253124	2253474
GCA_009912295.1	GCA_009912295.1_02323	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP047780.1	2380931	2381866
GCA_009912295.1	GCA_009912295.1_02324	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP047780.1	2381868	2382851
GCA_009912295.1	GCA_009912295.1_02329	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	230	235	97.87	95.65	230	ABD31004.1	serine protease SplA	NA	NA	CP047780.1	2386984	2387676
GCA_009912295.1	GCA_009912295.1_02330	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA	CP047780.1	2387801	2388523
GCA_009912295.1	GCA_009912295.1_02333	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	99.58	238	ABD30999.1	serine protease SplE	NA	NA	CP047780.1	2390298	2391014
GCA_009912295.1	GCA_009912295.1_02379	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP047780.1	2428453	2429745
GCA_003942775.1	GCA_003942775.1_00049	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.74	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RJNX01000001.1	58376	59575
GCA_003942775.1	GCA_003942775.1_00599	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJNX01000002.1	124815	126032
GCA_003942775.1	GCA_003942775.1_00600	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJNX01000002.1	126152	127615
GCA_003464965.1	GCA_003464965.1_01888	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.13	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	QSAF01000028.1	5414	7339
GCA_003464965.1	GCA_003464965.1_02331	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	300	296	100.00	63.85	296	WP_005827792.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	QSAF01000031.1	26050	26952
GCA_003464965.1	GCA_003464965.1_02717	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	QSAF01000041.1	52	852
GCA_003464965.1	GCA_003464965.1_02719	blaOXA-347	class D beta-lactamase OXA-347	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	274	274	100.00	100.00	274	WP_004295324.1	class D beta-lactamase OXA-347	NF012161.0	class D beta-lactamase	QSAF01000041.1	1055	1879
GCA_011045235.1	GCA_011045235.1_00027	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	396	99.49	99.49	394	EFF04178.1	multidrug efflux MFS transporter EmrD	NA	NA	CP049204.1	24382	25566
GCA_011045235.1	GCA_011045235.1_00052	air	inverse autotransporter adhesin EaeX/Air	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	3802	3806	100.00	86.19	3809	CBG36838.1	inverse autotransporter adhesin EaeX/Air	NA	NA	CP049204.1	50412	61820
GCA_011045235.1	GCA_011045235.1_00053	eilA	HilA family transcriptional regulator EilA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	565	565	100.00	99.65	565	ACB16655.1	HilA family transcriptional regulator EilA	NA	NA	CP049204.1	61870	63567
GCA_011045235.1	GCA_011045235.1_00182	lpfA1	long polar fimbria major subunit LpfA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	174	178	97.75	99.43	174	OPH66324.1	long polar fimbria major subunit LpfA1	NA	NA	CP049204.1	199452	199976
GCA_011045235.1	GCA_011045235.1_00252	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	94.33	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP049204.1	273934	274359
GCA_011045235.1	GCA_011045235.1_00254	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	117	117	100.00	94.87	117	BAE77793.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP049204.1	275715	276068
GCA_011045235.1	GCA_011045235.1_00500	acrF	multidrug efflux RND transporter permease subunit AcrF	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1034	1034	100.00	99.61	1034	AAC76298.1	multidrug efflux RND transporter permease subunit AcrF	NA	NA	CP049204.1	503361	506465
GCA_011045235.1	GCA_011045235.1_00799	sslE	lipoprotein metalloprotease SslE	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	1519	1520	100.00	88.49	1520	ADE89421.1	lipoprotein metalloprotease SslE	NF037973.1	lipoprotein metalloprotease SslE	CP049204.1	802479	807038
GCA_011045235.1	GCA_011045235.1_02235	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	BLASTP	102	102	100.00	99.02	102	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP049204.1	2266305	2266613
GCA_011045235.1	GCA_011045235.1_02684	ariR	biofilm/acid-resistance regulator AriR	plus	STRESS	ACID	NA	NA	EXACTP	88	88	100.00	100.00	88	AAC74250.1	biofilm/acid-resistance regulator AriR	NA	NA	CP049204.1	2727900	2728166
GCA_011045235.1	GCA_011045235.1_03991	espX1	type III secretion system effector EspX1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	473	473	100.00	94.29	473	ADD54679.1	type III secretion system effector EspX1	NA	NA	CP049204.1	4048885	4050306
GCA_011045235.1	GCA_011045235.1_04092	mdtM	multidrug efflux MFS transporter MdtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	100.00	97.56	410	AAC77293.1	multidrug efflux MFS transporter MdtM	NA	NA	CP049204.1	4144122	4145354
GCA_011045235.1	GCA_011045235.1_04284	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	377	377	100.00	97.08	377	WP_063610930.1	extended-spectrum class C beta-lactamase EC-15	NF000185.2	BlaEC family class C beta-lactamase	CP049204.1	4343462	4344595
GCA_011045235.1	GCA_011045235.1_04559	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	CP049204.1	4625552	4626454
GCA_022870765.1	GCA_022870765.1_01003	vanS-C	vancomycin resistance histidine kinase VanS-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	354	376	94.15	95.20	354	WP_034869172.1	vancomycin resistance histidine kinase VanS-C	NF033091.0	vancomycin resistance histidine kinase VanS	CP086066.1	1084681	1085745
GCA_022870765.1	GCA_022870765.1_01004	vanR-C	vancomycin resistance response regulator transcription factor VanR-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	231	231	100.00	100.00	231	WP_034872470.1	vancomycin resistance response regulator transcription factor VanR-C	NF000403.1	vancomycin resistance response regulator transcription factor VanR-C	CP086066.1	1085801	1086496
GCA_022870765.1	GCA_022870765.1_01005	vanT-C	membrane-bound serine racemase VanT-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	700	700	100.00	99.57	700	WP_063856756.1	membrane-bound serine racemase VanT-C	NF033132.1	membrane-bound serine racemase VanT	CP086066.1	1086595	1088697
GCA_022870765.1	GCA_022870765.1_01006	vanXY-C	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	190	190	100.00	100.00	190	WP_008377360.1	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	NF000380.1	D,D-carboxypeptidase/D,D-dipeptidase VanXY	CP086066.1	1088694	1089266
GCA_022870765.1	GCA_022870765.1_01007	vanC	D-alanine--D-serine ligase VanC2/3	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	350	350	100.00	98.86	350	WP_063856657.1	D-alanine--D-serine ligase VanC2/3	NF012214.1	D-alanine--D-serine ligase VanC	CP086066.1	1089263	1090315
GCA_022870765.1	GCA_022870765.1_01183	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	133	95.49	58.59	128	WP_010989789.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP086066.1	1252984	1253394
GCA_009717805.1	GCA_009717805.1_00358	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMZG01000001.1	354626	356089
GCA_009717805.1	GCA_009717805.1_00359	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMZG01000001.1	356209	357426
GCA_009717805.1	GCA_009717805.1_00527	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMZG01000001.1	516065	516493
GCA_009717805.1	GCA_009717805.1_00912	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMZG01000002.1	53658	55394
GCA_009717805.1	GCA_009717805.1_00913	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMZG01000002.1	55396	57120
GCA_026427475.1	GCA_026427475.1_01579	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP084437.1	1550535	1550954
GCA_026427475.1	GCA_026427475.1_02090	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP084437.1	2073388	2074461
GCA_026427475.1	GCA_026427475.1_02102	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP084437.1	2085690	2087696
GCA_026427475.1	GCA_026427475.1_02103	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP084437.1	2087796	2088782
GCA_026427475.1	GCA_026427475.1_02242	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084437.1	2237763	2239055
GCA_026427475.1	GCA_026427475.1_02389	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP084437.1	2385775	2386620
GCA_026427475.1	GCA_026427475.1_02390	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP084437.1	2386727	2388484
GCA_026427475.1	GCA_026427475.1_02391	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP084437.1	2388474	2388854
GCA_026427475.1	GCA_026427475.1_02571	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP084439.1	939	1673
GCA_020735785.1	GCA_020735785.1_01300	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP085942.1	1563620	1564810
GCA_020735785.1	GCA_020735785.1_01649	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP085943.1	205047	205373
GCA_005157865.1	GCA_005157865.1_00579	aac(6)-Iih	aminoglycoside N-acetyltransferase AAC(6)-Iih	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ALLELEP	183	183	100.00	100.00	183	WP_005880220.1	aminoglycoside N-acetyltransferase AAC(6)-Iih	NF000165.3	aminoglycoside 6-N-acetyltransferase	CP028928.1	565612	566163
GCA_005157865.1	GCA_005157865.1_00990	copB	copper/silver-translocating P-type ATPase CopB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	756	745	95.57	84.25	724	AFM70730.1	copper/silver-translocating P-type ATPase CopB	NA	NA	CP028928.1	982803	985073
GCA_005157865.1	GCA_005157865.1_02525	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	99.01	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP028928.1	2534812	2536926
GCA_000800355.1	GCA_000800355.1_00721	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP009421.1	725949	727328
GCA_000800355.1	GCA_000800355.1_01463	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP009421.1	1491878	1492783
GCA_000800355.1	GCA_000800355.1_01591	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP009421.1	1628163	1629401
GCA_000800355.1	GCA_000800355.1_01592	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP009421.1	1629809	1630441
GCA_000800355.1	GCA_000800355.1_01594	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP009421.1	1631266	1632834
GCA_000800355.1	GCA_000800355.1_01794	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP009421.1	1842315	1843841
GCA_024759505.1	GCA_024759505.1_01602	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103166.1	1984158	1986083
GCA_024759505.1	GCA_024759505.1_01943	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	300	96.00	75.78	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103166.1	2416848	2417738
GCA_024759505.1	GCA_024759505.1_02827	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	94.13	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103166.1	3361434	3362765
GCA_024294745.1	GCA_024294745.1_00469	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOD010000001.1	478482	479945
GCA_024294745.1	GCA_024294745.1_00470	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOD010000001.1	480065	481282
GCA_024294745.1	GCA_024294745.1_00536	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOD010000001.1	539649	540077
GCA_023147965.1	GCA_023147965.1_00647	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHXOL010000002.1	132283	134202
GCA_024384655.1	GCA_024384655.1_01646	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANFLW010000012.1	30103	31743
GCA_006546835.1	GCA_006546835.1_00414	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	272	284	96.13	56.41	273	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	VICB01000003.1	341024	341842
GCA_023404035.1	GCA_023404035.1_02536	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	249	93.57	46.61	236	WP_197749418.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	JAEYDF010000024.1	7593	8369
GCA_017655805.1	GCA_017655805.1_00542	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040413.1	514843	515217
GCA_000238215.1	GCA_000238215.1_01122	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP003191.1	1331035	1332960
GCA_009932715.2	GCA_009932715.2_00038	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP084235.1	46956	47348
GCA_009932715.2	GCA_009932715.2_00039	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084235.1	47366	48658
GCA_009932715.2	GCA_009932715.2_00113	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.79	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084235.1	116879	118171
GCA_009932715.2	GCA_009932715.2_00253	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP084235.1	269305	270150
GCA_009932715.2	GCA_009932715.2_00254	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	321	585	54.70	90.94	320	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	CP084235.1	270257	271222
GCA_009932715.2	GCA_009932715.2_00256	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	97.62	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP084235.1	272003	272383
GCA_009932715.2	GCA_009932715.2_02400	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP084236.1	20863	21423
GCA_009932715.2	GCA_009932715.2_02401	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP084236.1	21607	23151
GCA_021367585.1	GCA_021367585.1_00727	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	80.65	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCOE010000001.1	748143	749432
GCA_021367585.1	GCA_021367585.1_01605	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHCOE010000004.1	117581	117982
GCA_021367585.1	GCA_021367585.1_01606	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCOE010000004.1	118000	119289
GCA_021367585.1	GCA_021367585.1_01607	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	97.12	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAHCOE010000004.1	119289	119603
GCA_014672755.1	GCA_014672755.1_00849	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	397	397	100.00	100.00	397	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP059040.1	916174	917367
GCA_014672755.1	GCA_014672755.1_01036	blaADC-158	extended-spectrum class C beta-lactamase ADC-158	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	383	383	100.00	100.00	383	WP_001211227.1	extended-spectrum class C beta-lactamase ADC-158	NF000425.2	ADC family extended-spectrum class C beta-lactamase	CP059040.1	1125825	1126976
GCA_014672755.1	GCA_014672755.1_01450	amvA	multidrug efflux MFS transporter AmvA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	492	492	100.00	98.98	492	ACQ82816.1	multidrug efflux MFS transporter AmvA	NA	NA	CP059040.1	1524396	1525874
GCA_014672755.1	GCA_014672755.1_02005	blaOXA-98	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_001021777.1	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	NF000268.2	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase	CP059040.1	2110940	2111764
GCA_014672755.1	GCA_014672755.1_02253	abaF	fosfomycin efflux MFS transporter AbaF	plus	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	429	429	100.00	100.00	429	ABO11759.2	fosfomycin efflux MFS transporter AbaF	NA	NA	CP059040.1	2372079	2373368
GCA_014672755.1	GCA_014672755.1_02633	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	96.26	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP059040.1	2756567	2758252
GCA_014672755.1	GCA_014672755.1_02634	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP059040.1	2758291	2758716
GCA_014672755.1	GCA_014672755.1_02636	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	91.67	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP059040.1	2759455	2759889
GCA_014672755.1	GCA_014672755.1_03192	nreB	nickel resistance MFS transporter NreB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	416	416	100.00	98.08	416	ADY84088.1	nickel resistance MFS transporter NreB	NA	NA	CP059040.1	3317688	3318938
GCA_014672755.1	GCA_014672755.1_03628	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001112624.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	CP059040.1	3772685	3773473
GCA_014672755.1	GCA_014672755.1_03743	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP059040.1	3896282	3897097
GCA_002966635.1	GCA_002966635.1_01375	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.63	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP020009.1	1358116	1359510
GCA_001051905.1	GCA_001051905.1_00010	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	LFKQ01000015.1	9257	10000
GCA_001051905.1	GCA_001051905.1_00011	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	LFKQ01000015.1	10223	10621
GCA_001051905.1	GCA_001051905.1_00335	blaTEM-116	broad-spectrum class A beta-lactamase TEM-116	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027050.1	broad-spectrum class A beta-lactamase TEM-116	NF000531.2	TEM family class A beta-lactamase	LFKQ01000010.1	1583	2443
GCA_002222615.2	GCA_002222615.2_01759	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	300	96.00	74.74	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP022412.2	2256819	2257709
GCA_002222615.2	GCA_002222615.2_02400	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	94.58	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP022412.2	2947303	2948634
GCA_022569085.1	GCA_022569085.1_00353	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKL010000001.1	343072	343491
GCA_022569085.1	GCA_022569085.1_01893	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKRKL010000003.1	22632	23012
GCA_022569085.1	GCA_022569085.1_01894	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKRKL010000003.1	23002	24759
GCA_022569085.1	GCA_022569085.1_01895	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKRKL010000003.1	24866	25711
GCA_022569085.1	GCA_022569085.1_02047	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKL010000003.1	176146	177438
GCA_022569085.1	GCA_022569085.1_02196	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKL010000003.1	337794	338867
GCA_020883475.1	GCA_020883475.1_00099	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP086659.1	108336	109118
GCA_020883475.1	GCA_020883475.1_00100	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP086659.1	109244	109975
GCA_020883475.1	GCA_020883475.1_00109	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP086659.1	116686	117057
GCA_020883475.1	GCA_020883475.1_00110	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP086659.1	117057	118814
GCA_020883475.1	GCA_020883475.1_00111	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP086659.1	118914	120920
GCA_020883475.1	GCA_020883475.1_00116	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP086659.1	124310	125053
GCA_020883475.1	GCA_020883475.1_00117	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP086659.1	125270	125674
GCA_020883475.1	GCA_020883475.1_00123	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP086659.1	130160	130582
GCA_020883475.1	GCA_020883475.1_00164	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP086659.1	183985	185058
GCA_020883475.1	GCA_020883475.1_00918	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP086659.1	953179	953664
GCA_020883475.1	GCA_020883475.1_01032	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP086659.1	1032689	1033978
GCA_020883475.1	GCA_020883475.1_01351	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP086659.1	1329442	1330224
GCA_020883475.1	GCA_020883475.1_01352	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP086659.1	1330350	1331081
GCA_005886145.1	GCA_005886145.1_00133	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.51	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP040504.1	130036	131415
GCA_022690585.1	GCA_022690585.1_00583	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	68.35	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCVC010000019.1	29622	30059
GCA_022690585.1	GCA_022690585.1_01195	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVC010000022.1	3083	4375
GCA_022690585.1	GCA_022690585.1_01199	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVC010000022.1	8058	8405
GCA_022690585.1	GCA_022690585.1_02017	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCVC010000004.1	68952	70025
GCA_022690585.1	GCA_022690585.1_02509	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVC010000008.1	61482	62771
GCA_902460385.1	GCA_902460385.1_00371	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABPTS010000002.1	56289	58208
GCA_013315125.1	GCA_013315125.1_00577	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JABUHB010000001.1	786208	787686
GCA_900445915.1	GCA_900445915.1_00320	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	476	561	82.17	46.57	466	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UAQN01000012.1	347948	349378
GCA_900445915.1	GCA_900445915.1_00329	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	146	144	88.89	48.84	129	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	UAQN01000012.1	358151	358591
GCA_900445915.1	GCA_900445915.1_02813	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	302	98.68	42.62	305	WP_105777201.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	UAQN01000007.1	346673	347557
GCA_900445915.1	GCA_900445915.1_02846	catB	type B chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	213	210	97.62	72.68	205	WP_031281281.1	type B chloramphenicol O-acetyltransferase	NF000490.1	type B chloramphenicol O-acetyltransferase	UAQN01000007.1	380776	381417
GCA_030175975.1	GCA_030175975.1_01127	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASNUU010000026.1	787	1638
GCA_030175975.1	GCA_030175975.1_01136	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUU010000026.1	9520	10374
GCA_030175975.1	GCA_030175975.1_01448	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASNUU010000032.1	1844	3019
GCA_009378055.1	GCA_009378055.1_01500	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RQWL01000005.1	102289	103230
GCA_029917045.1	GCA_029917045.1_00063	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP123979.1	63466	65472
GCA_029917045.1	GCA_029917045.1_00115	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP123979.1	111944	112345
GCA_029917045.1	GCA_029917045.1_00116	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP123979.1	112363	113652
GCA_029917045.1	GCA_029917045.1_00136	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP123979.1	132163	132555
GCA_029917045.1	GCA_029917045.1_00137	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP123979.1	132573	133865
GCA_029917045.1	GCA_029917045.1_00219	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP123979.1	208654	209946
GCA_029917045.1	GCA_029917045.1_02512	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP123979.1	2484203	2484583
GCA_029917045.1	GCA_029917045.1_02513	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP123979.1	2484573	2486330
GCA_029917045.1	GCA_029917045.1_02514	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP123979.1	2486437	2487282
GCA_029917045.1	GCA_029917045.1_02637	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP123981.1	16284	17750
GCA_029917045.1	GCA_029917045.1_02638	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP123981.1	17849	18748
GCA_029917045.1	GCA_029917045.1_02640	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP123981.1	20052	20612
GCA_029917045.1	GCA_029917045.1_02641	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP123981.1	20796	22340
GCA_029917045.1	GCA_029917045.1_02647	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP123982.1	897	2465
GCA_900636265.1	GCA_900636265.1_00412	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR134244.1	445533	446825
GCA_015732685.1	GCA_015732685.1_00454	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030822.1	457595	458974
GCA_015732685.1	GCA_015732685.1_01328	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030822.1	1349724	1350962
GCA_015732685.1	GCA_015732685.1_01330	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	215	210	74.29	98.72	156	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030822.1	1352453	1353100
GCA_015732685.1	GCA_015732685.1_01332	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030822.1	1353911	1355479
GCA_015732685.1	GCA_015732685.1_01528	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030822.1	1557558	1559084
GCA_902375245.1	GCA_902375245.1_02214	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.23	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CABKTD010000006.1	602551	604029
GCA_013276855.1	GCA_013276855.1_00824	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.90	639	WP_000691746.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMLU01000024.1	31629	33548
GCA_013276855.1	GCA_013276855.1_02074	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMLU01000080.1	13729	14862
GCA_013276855.1	GCA_013276855.1_02175	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	VMLU01000095.1	11713	12450
GCA_900450865.1	GCA_900450865.1_00376	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	UGHS01000004.1	367743	368603
GCA_001579645.1	GCA_001579645.1_00710	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KQ970818.1	736003	736431
GCA_005890285.1	GCA_005890285.1_00586	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	SOQD01000036.1	128937	130154
GCA_005890285.1	GCA_005890285.1_00587	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	SOQD01000036.1	130175	131638
GCA_005890285.1	GCA_005890285.1_00624	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	SOQD01000036.1	162504	164423
GCA_005890285.1	GCA_005890285.1_01387	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.14	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQD01000052.1	25701	26834
GCA_000560145.1	GCA_000560145.1_00041	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	KK022849.1	45209	47215
GCA_000560145.1	GCA_000560145.1_00042	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	KK022849.1	47315	48301
GCA_000560145.1	GCA_000560145.1_00150	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	KK022849.1	164324	165682
GCA_000560145.1	GCA_000560145.1_00354	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	KK022849.1	393993	395348
GCA_000560145.1	GCA_000560145.1_00392	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	KK022849.1	428577	429188
GCA_000560145.1	GCA_000560145.1_01473	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	KK022849.1	1553057	1554034
GCA_000560145.1	GCA_000560145.1_01474	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	KK022849.1	1554036	1554974
GCA_000560145.1	GCA_000560145.1_01649	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	KK022849.1	1701697	1702449
GCA_000560145.1	GCA_000560145.1_01822	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KK022849.1	1894780	1896072
GCA_000560145.1	GCA_000560145.1_01865	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	KK022849.1	1933314	1934030
GCA_000560145.1	GCA_000560145.1_01868	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	KK022849.1	1935805	1936527
GCA_000560145.1	GCA_000560145.1_01869	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	KK022849.1	1936652	1937359
GCA_000560145.1	GCA_000560145.1_01879	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	KK022849.1	1949008	1949991
GCA_000560145.1	GCA_000560145.1_01880	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	KK022849.1	1949993	1950928
GCA_000560145.1	GCA_000560145.1_02039	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	KK022849.1	2079439	2079789
GCA_000560145.1	GCA_000560145.1_02044	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	KK022849.1	2082003	2082494
GCA_000560145.1	GCA_000560145.1_02122	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	KK022849.1	2140150	2140284
GCA_000560145.1	GCA_000560145.1_02271	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.58	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	KK022849.1	2292333	2293775
GCA_000560145.1	GCA_000560145.1_02446	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	KK022849.1	2445330	2445749
GCA_000560145.1	GCA_000560145.1_02533	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	KK022849.1	2534988	2535953
GCA_000560145.1	GCA_000560145.1_02534	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	KK022849.1	2536520	2537467
GCA_000560145.1	GCA_000560145.1_02535	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	KK022849.1	2537469	2538446
GCA_000560145.1	GCA_000560145.1_02759	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	KK022849.1	2777007	2778536
GCA_000560145.1	GCA_000560145.1_02793	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KK022849.1	2821869	2822921
GCA_000212835.1	GCA_000212835.1_00707	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	GL890990.1	688364	689827
GCA_000212835.1	GCA_000212835.1_00708	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	GL890990.1	689947	691164
GCA_002943685.1	GCA_002943685.1_01496	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	99.26	63.70	135	WP_015741374.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	MUHI01000022.1	16187	16597
GCA_002943685.1	GCA_002943685.1_03117	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	413	100.00	80.05	416	CAK15125.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	MUHI01000044.1	35241	36482
GCA_002943685.1	GCA_002943685.1_03640	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	380	397	94.21	58.82	374	WP_104009838.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	MUHI01000049.1	18536	19678
GCA_002943685.1	GCA_002943685.1_05792	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	256	267	96.25	56.81	257	WP_012479999.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	MUHI01000009.1	241740	242510
GCA_003494485.1	GCA_003494485.1_00089	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQIB01000001.1	101634	103028
GCA_001434135.1	GCA_001434135.1_02453	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.02	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	AZEB01000061.1	233	2347
GCA_014596425.2	GCA_014596425.2_01811	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP110721.1	1892473	1894392
GCA_024789025.1	GCA_024789025.1_02706	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.33	76.47	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JANUTA010000001.1	3311767	3312648
GCA_024789025.1	GCA_024789025.1_03885	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	45.63	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANUTA010000001.1	4724327	4724653
GCA_024789025.1	GCA_024789025.1_04131	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	99.77	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	JANUTA010000001.1	4987250	4988581
GCA_024789025.1	GCA_024789025.1_05471	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	648	641	99.53	97.81	638	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUTA010000001.1	6465920	6467866
GCA_024789025.1	GCA_024789025.1_05666	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUTA010000001.1	6685736	6687661
GCA_003492865.1	GCA_003492865.1_00628	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQLL01000002.1	157993	158898
GCA_003492865.1	GCA_003492865.1_01636	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQLL01000008.1	116149	117675
GCA_003492865.1	GCA_003492865.1_01667	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQLL01000009.1	18068	18931
GCA_003492865.1	GCA_003492865.1_01668	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQLL01000009.1	18948	20186
GCA_003116505.1	GCA_003116505.1_01383	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	PIRT01000004.1	119926	121845
GCA_000698365.1	GCA_000698365.1_01252	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.78	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP007805.1	1268597	1269991
GCA_020729665.1	GCA_020729665.1_00751	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAJEPC010000014.1	133529	135448
GCA_000960105.1	GCA_000960105.1_00059	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JYGU01000001.1	66624	68282
GCA_000960105.1	GCA_000960105.1_00865	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JYGU01000006.1	512158	512586
GCA_030439945.1	GCA_030439945.1_00365	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQFJE010000001.1	352684	353421
GCA_030439945.1	GCA_030439945.1_00376	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQFJE010000001.1	363339	365258
GCA_022689145.1	GCA_022689145.1_00326	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXV010000014.1	44153	44572
GCA_022689145.1	GCA_022689145.1_01078	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCXV010000001.1	513161	513541
GCA_022689145.1	GCA_022689145.1_01079	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCXV010000001.1	513531	515288
GCA_022689145.1	GCA_022689145.1_01080	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCXV010000001.1	515395	516240
GCA_022689145.1	GCA_022689145.1_01227	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXV010000001.1	663312	664604
GCA_022689145.1	GCA_022689145.1_01361	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXV010000001.1	807247	808320
GCA_001697365.1	GCA_001697365.1_00316	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016647.1	306835	308214
GCA_001697365.1	GCA_001697365.1_01066	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016647.1	1073737	1074642
GCA_001697365.1	GCA_001697365.1_01186	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016647.1	1209958	1211196
GCA_001697365.1	GCA_001697365.1_01187	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016647.1	1211600	1212232
GCA_001697365.1	GCA_001697365.1_01189	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016647.1	1213057	1214625
GCA_001697365.1	GCA_001697365.1_01383	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.82	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016647.1	1416158	1417684
GCA_000252245.2	GCA_000252245.2_01044	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AILH01000003.1	148771	150234
GCA_000252245.2	GCA_000252245.2_01045	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AILH01000003.1	150255	151472
GCA_000252245.2	GCA_000252245.2_01774	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AILH01000003.1	856471	857670
GCA_000252245.2	GCA_000252245.2_01849	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AILH01000003.1	924254	924682
GCA_001814995.1	GCA_001814995.1_00435	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV818671.1	204	1058
GCA_002276695.1	GCA_002276695.1_01618	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NCWU01000004.1	232342	233982
GCA_007672555.1	GCA_007672555.1_02076	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VDSV01000007.1	6627	8051
GCA_026636275.1	GCA_026636275.1_01111	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	98.86	53.31	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP088927.1	1106043	1107110
GCA_026636275.1	GCA_026636275.1_01473	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.55	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP088927.1	1494416	1495708
GCA_026636275.1	GCA_026636275.1_02537	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP088928.1	12927	13274
GCA_026636275.1	GCA_026636275.1_02541	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP088928.1	16957	18249
GCA_005890555.1	GCA_005890555.1_00745	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	SOQM01000034.1	53156	55075
GCA_005890555.1	GCA_005890555.1_00938	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	99.20	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQM01000004.1	149480	150613
GCA_030583585.1	GCA_030583585.1_02518	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	305	97.38	54.21	297	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP126032.1	2668200	2669099
GCA_030583585.1	GCA_030583585.1_02575	blaBJP	BJP family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	295	294	99.66	85.32	293	WP_011088970.1	BJP family subclass B3 metallo-beta-lactamase	NF012140.0	BJP family subclass B3 metallo-beta-lactamase	CP126032.1	2736645	2737532
GCA_030583585.1	GCA_030583585.1_04166	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	272	99.26	69.26	270	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP126032.1	4365090	4365899
GCA_003495565.1	GCA_003495565.1_01333	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQEI01000004.1	73818	74723
GCA_003495565.1	GCA_003495565.1_01548	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQEI01000005.1	77010	77642
GCA_003495565.1	GCA_003495565.1_01549	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.36	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQEI01000005.1	77889	79127
GCA_003495565.1	GCA_003495565.1_01872	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQEI01000008.1	115058	116584
GCA_030812115.1	GCA_030812115.1_00259	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	82.52	56.78	118	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	JAUSSC010000001.1	263112	263507
GCA_030812115.1	GCA_030812115.1_00348	blaLRA1	LRA1 family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	294	295	99.66	90.82	294	WP_063842263.1	LRA1 family class A beta-lactamase	NF033103.1	class A beta-lactamase	JAUSSC010000001.1	364730	365614
GCA_030812115.1	GCA_030812115.1_01258	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	290	271	95.20	51.35	259	WP_064808881.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	JAUSSC010000001.1	1298928	1299800
GCA_030812115.1	GCA_030812115.1_02268	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	268	267	94.76	55.34	253	WP_001082319.1	APH(3) family aminoglycoside O-phosphotransferase	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	JAUSSC010000002.1	389445	390251
GCA_030812115.1	GCA_030812115.1_02987	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	399	399	94.99	54.86	381	WP_063855983.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	JAUSSC010000003.1	149915	151114
GCA_014701215.1	GCA_014701215.1_01203	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	463	464	100.00	96.34	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP022846.1	1204935	1206326
GCA_014701215.1	GCA_014701215.1_01321	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	97.56	43.33	120	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP022846.1	1326270	1326635
GCA_000317305.3	GCA_000317305.3_02337	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	294	98.98	64.98	297	WP_063842628.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP006936.2	2445209	2446120
GCA_000317305.3	GCA_000317305.3_03904	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	391	96.68	61.64	378	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	CP006936.2	4095807	4096982
GCA_000317305.3	GCA_000317305.3_04240	tet(V)	tetracycline efflux MFS transporter Tet(V)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	416	419	97.85	68.29	410	WP_003896589.1	tetracycline efflux MFS transporter Tet(V)	NF012178.0	tetracycline efflux MFS transporter Tet(V)	CP006936.2	4459452	4460702
GCA_902385235.1	GCA_902385235.1_00119	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABMEQ010000001.1	107451	109091
GCA_902385235.1	GCA_902385235.1_00598	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CABMEQ010000002.1	169849	170580
GCA_902385235.1	GCA_902385235.1_00606	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABMEQ010000002.1	176154	178073
GCA_902385235.1	GCA_902385235.1_01381	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	123	123	100.00	50.79	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABMEQ010000005.1	54201	54572
GCA_903910465.1	GCA_903910465.1_00137	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	LR822048.1	118264	119001
GCA_903910465.1	GCA_903910465.1_00138	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.90	639	WP_004632336.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LR822048.1	120108	122027
GCA_017301315.1	GCA_017301315.1_01054	smdA	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	591	591	100.00	98.48	591	BAF79679.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	NA	NA	CP071244.1	1099704	1101479
GCA_017301315.1	GCA_017301315.1_01055	smdB	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	592	592	100.00	98.65	592	BAF79680.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	NA	NA	CP071244.1	1101472	1103250
GCA_017301315.1	GCA_017301315.1_01070	sdeY	multidrug efflux RND transporter permease subunit SdeY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1048	1051	99.43	95.70	1046	BAC77251.1	multidrug efflux RND transporter permease subunit SdeY	NA	NA	CP071244.1	1112540	1115686
GCA_017301315.1	GCA_017301315.1_01956	sdeB	multidrug efflux RND transporter permease subunit SdeB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1047	1047	100.00	99.62	1047	AAO18187.2	multidrug efflux RND transporter permease subunit SdeB	NA	NA	CP071244.1	2018160	2021303
GCA_017301315.1	GCA_017301315.1_01957	sdeA	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	395	395	100.00	99.75	395	AAS55383.1	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	CP071244.1	2021328	2022515
GCA_017301315.1	GCA_017301315.1_02295	blaSRT	SRT/SST family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	378	378	100.00	99.47	378	WP_063864750.1	cephalosporin-hydrolyzing class C beta-lactamase SST-1	NF000423.2	SRT/SST family class C beta-lactamase	CP071244.1	2345829	2346965
GCA_017301315.1	GCA_017301315.1_02528	tet(41)	tetracycline efflux MFS transporter Tet(41)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	388	393	98.73	95.62	388	WP_063855881.1	tetracycline efflux MFS transporter Tet(41)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP071244.1	2615276	2616442
GCA_017301315.1	GCA_017301315.1_02612	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	91	102	90.20	71.58	95	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP071244.1	2705511	2705786
GCA_017301315.1	GCA_017301315.1_02626	ssmE	multidrug efflux SMR transporter SsmE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	106	110	96.36	100.00	106	BAF80121.1	multidrug efflux SMR transporter SsmE	NA	NA	CP071244.1	2720914	2721234
GCA_017301315.1	GCA_017301315.1_02728	smfY	multidrug efflux MFS transporter SmfY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	490	490	100.00	98.37	490	BAE79899.1	multidrug efflux MFS transporter SmfY	NA	NA	CP071244.1	2836700	2838172
GCA_017301315.1	GCA_017301315.1_02875	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	139	98.56	67.15	137	WP_004857515.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP071244.1	2978266	2978673
GCA_017301315.1	GCA_017301315.1_04301	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	146	146	100.00	100.00	146	WP_033639326.1	aminoglycoside 6-N-acetyltransferase	NF000021.4	aminoglycoside 6-N-acetyltransferase	CP071244.1	4464234	4464674
GCA_017301315.1	GCA_017301315.1_04797	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	81.27	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP071244.1	4987026	4987928
GCA_022762945.1	GCA_022762945.1_00352	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKTNE010000015.1	9811	10656
GCA_022762945.1	GCA_022762945.1_00353	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKTNE010000015.1	10763	12520
GCA_022762945.1	GCA_022762945.1_00354	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKTNE010000015.1	12510	12890
GCA_022762945.1	GCA_022762945.1_00400	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAKTNE010000016.1	15410	16954
GCA_022762945.1	GCA_022762945.1_00401	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAKTNE010000016.1	17138	17698
GCA_022762945.1	GCA_022762945.1_00412	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JAKTNE010000017.1	5387	5758
GCA_022762945.1	GCA_022762945.1_00413	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JAKTNE010000017.1	5758	7515
GCA_022762945.1	GCA_022762945.1_00414	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKTNE010000017.1	7615	9621
GCA_022762945.1	GCA_022762945.1_00419	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAKTNE010000018.1	1402	2133
GCA_022762945.1	GCA_022762945.1_00420	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JAKTNE010000018.1	2259	3041
GCA_022762945.1	GCA_022762945.1_00427	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JAKTNE010000019.1	3108	3512
GCA_022762945.1	GCA_022762945.1_00428	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JAKTNE010000019.1	3729	4472
GCA_022762945.1	GCA_022762945.1_00858	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAKTNE010000024.1	1132	1617
GCA_022762945.1	GCA_022762945.1_00859	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAKTNE010000025.1	109	1548
GCA_022762945.1	GCA_022762945.1_01186	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKTNE010000002.1	351993	353066
GCA_022762945.1	GCA_022762945.1_01227	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKTNE010000002.1	406469	406891
GCA_022762945.1	GCA_022762945.1_02275	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKTNE010000007.1	60415	61704
GCA_019929205.1	GCA_019929205.1_00878	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHZPB010000002.1	101752	103410
GCA_938028205.1	GCA_938028205.1_01436	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	579	579	100.00	100.00	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	CALJAJ010000075.1	1830	3569
GCA_938028205.1	GCA_938028205.1_01437	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	93.26	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	CALJAJ010000075.1	3566	5305
GCA_938028205.1	GCA_938028205.1_01752	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CALJAJ010000091.1	77416	77844
GCA_000174135.1	GCA_000174135.1_00090	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	ACFR01000018.1	11059	11439
GCA_000174135.1	GCA_000174135.1_00091	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	ACFR01000018.1	11429	13186
GCA_000174135.1	GCA_000174135.1_00092	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	ACFR01000018.1	13293	14138
GCA_000174135.1	GCA_000174135.1_00548	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	ACFR01000010.1	60330	61619
GCA_000174135.1	GCA_000174135.1_00943	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	ACFR01000006.1	85901	86974
GCA_000174135.1	GCA_000174135.1_01134	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	ACFR01000004.1	6793	8082
GCA_000174135.1	GCA_000174135.1_01135	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	ACFR01000004.1	8100	8501
GCA_000334515.1	GCA_000334515.1_00279	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	144	141	99.29	85.71	140	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	FO203355.1	271585	272019
GCA_000334515.1	GCA_000334515.1_00430	clbB	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	3206	3206	100.00	100.00	3206	AMQ58400.1	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	NA	NA	FO203355.1	433453	443073
GCA_000334515.1	GCA_000334515.1_00443	clbN	colibactin non-ribosomal peptide synthetase ClbN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1455	1455	100.00	100.00	1455	AMH08480.1	colibactin non-ribosomal peptide synthetase ClbN	NA	NA	FO203355.1	473170	477537
GCA_000334515.1	GCA_000334515.1_00477	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.50	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	FO203355.1	525803	527605
GCA_000334515.1	GCA_000334515.1_00478	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.33	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	FO203355.1	527592	529394
GCA_000334515.1	GCA_000334515.1_01782	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	97.43	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	FO203355.1	1830152	1833304
GCA_000334515.1	GCA_000334515.1_02210	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	97.80	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	FO203355.1	2279327	2280559
GCA_000334515.1	GCA_000334515.1_02763	ampC-Kaer	AmpC-Kaer family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	386	381	100.00	100.00	381	WP_063406924.1	extended-spectrum class C beta-lactamase AmpC-Kaer-1	NF041662.1	AmpC-Kaer family extended-spectrum class C beta-lactamase	FO203355.1	2839608	2840768
GCA_000334515.1	GCA_000334515.1_03168	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	94.96	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	FO203355.1	3276133	3276552
GCA_000334515.1	GCA_000334515.1_03728	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	298	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	FO203355.1	3850106	3851002
GCA_000334515.1	GCA_000334515.1_03858	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	96.45	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	FO203355.1	3981874	3983058
GCA_000334515.1	GCA_000334515.1_04559	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	724	724	100.00	100.00	724	CCG33322.1	siderophore salmochelin receptor IroN	NA	NA	FO203355.1	4690045	4692219
GCA_000334515.1	GCA_000334515.1_04562	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1222	1219	100.00	84.30	1223	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	FO203355.1	4694632	4698300
GCA_000334515.1	GCA_000334515.1_04563	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.22	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	FO203355.1	4698347	4699462
GCA_000334515.1	GCA_000334515.1_05374	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	FO203354.1	31025	31840
GCA_000334515.1	GCA_000334515.1_05468	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	FO203354.1	115386	115841
GCA_000334515.1	GCA_000334515.1_05469	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	116	99.14	99.13	115	CAA70196.1	mercuric transport protein MerT	NA	NA	FO203354.1	115913	116278
GCA_000334515.1	GCA_000334515.1_05470	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	85.71	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	FO203354.1	116294	116569
GCA_000334515.1	GCA_000334515.1_05471	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	FO203354.1	116597	117022
GCA_000334515.1	GCA_000334515.1_05472	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	93.23	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FO203354.1	117061	118746
GCA_000334515.1	GCA_000334515.1_05473	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	FO203354.1	118764	119129
GCA_000334515.1	GCA_000334515.1_05474	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	FO203354.1	119126	119362
GCA_000334515.1	GCA_000334515.1_05481	blaTEM-24	extended-spectrum class A beta-lactamase TEM-24	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	286	286	100.00	100.00	286	WP_015365452.1	extended-spectrum class A beta-lactamase TEM-24	NF000531.2	TEM family class A beta-lactamase	FO203354.1	126950	127810
GCA_000334515.1	GCA_000334515.1_05485	aac(6)-Ib	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	BLASTP	210	184	100.00	99.46	184	WP_032488579.1	aminoglycoside N-acetyltransferase AAC(6)-Ib3	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	FO203354.1	130384	131016
GCA_000334515.1	GCA_000334515.1_05487	dfrA1	trimethoprim-resistant dihydrofolate reductase DfrA1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	157	157	100.00	100.00	157	WP_000777555.1	trimethoprim-resistant dihydrofolate reductase DfrA1	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	FO203354.1	131087	131560
GCA_000334515.1	GCA_000334515.1_05488	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	100.00	259	WP_046622360.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	FO203354.1	131665	132444
GCA_000334515.1	GCA_000334515.1_05489	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	FO203354.1	132608	132955
GCA_000334515.1	GCA_000334515.1_05490	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	FO203354.1	132949	133788
GCA_000334515.1	GCA_000334515.1_05497	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	100.00	78.21	78	AAA88371.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	FO203354.1	140310	140546
GCA_000334515.1	GCA_000334515.1_05498	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	120	121	100.00	82.64	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	FO203354.1	140543	140905
GCA_000334515.1	GCA_000334515.1_05499	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	564	561	100.00	85.31	565	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FO203354.1	140923	142617
GCA_000334515.1	GCA_000334515.1_05500	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	140	140	100.00	100.00	140	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	FO203354.1	142669	143091
GCA_000334515.1	GCA_000334515.1_05501	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	90.11	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	FO203354.1	143127	143402
GCA_000334515.1	GCA_000334515.1_05502	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	AAB59075.1	mercuric transport protein MerT	NA	NA	FO203354.1	143416	143766
GCA_000334515.1	GCA_000334515.1_05503	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	93.75	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	FO203354.1	143838	144272
GCA_030008055.1	GCA_030008055.1_00625	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP124777.1	643510	643932
GCA_030008055.1	GCA_030008055.1_00767	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	506	492	100.00	93.09	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP124777.1	799811	801331
GCA_030008055.1	GCA_030008055.1_00789	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	517	492	100.00	93.29	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP124777.1	813598	815151
GCA_030008055.1	GCA_030008055.1_02053	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP124777.1	2182054	2183973
GCA_021367495.1	GCA_021367495.1_02016	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCOH010000009.1	40298	41590
GCA_021367495.1	GCA_021367495.1_02567	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	96.04	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCOH010000025.1	875	2164
GCA_021367495.1	GCA_021367495.1_02568	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHCOH010000025.1	2182	2583
GCA_021367495.1	GCA_021367495.1_02572	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_000700648.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAHCOH010000028.1	979	1464
GCA_022137105.1	GCA_022137105.1_00649	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAKNER010000016.1	163	2082
GCA_017299315.1	GCA_017299315.1_01054	smdA	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	591	591	100.00	98.48	591	BAF79679.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	NA	NA	CP071230.1	1099704	1101479
GCA_017299315.1	GCA_017299315.1_01055	smdB	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	592	592	100.00	98.65	592	BAF79680.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	NA	NA	CP071230.1	1101472	1103250
GCA_017299315.1	GCA_017299315.1_01070	sdeY	multidrug efflux RND transporter permease subunit SdeY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1048	1051	99.43	95.70	1046	BAC77251.1	multidrug efflux RND transporter permease subunit SdeY	NA	NA	CP071230.1	1112540	1115686
GCA_017299315.1	GCA_017299315.1_01956	sdeB	multidrug efflux RND transporter permease subunit SdeB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1047	1047	100.00	99.62	1047	AAO18187.2	multidrug efflux RND transporter permease subunit SdeB	NA	NA	CP071230.1	2018160	2021303
GCA_017299315.1	GCA_017299315.1_01957	sdeA	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	395	395	100.00	99.75	395	AAS55383.1	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	CP071230.1	2021328	2022515
GCA_017299315.1	GCA_017299315.1_02295	blaSRT	SRT/SST family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	378	378	100.00	99.47	378	WP_063864750.1	cephalosporin-hydrolyzing class C beta-lactamase SST-1	NF000423.2	SRT/SST family class C beta-lactamase	CP071230.1	2345829	2346965
GCA_017299315.1	GCA_017299315.1_02528	tet(41)	tetracycline efflux MFS transporter Tet(41)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	388	393	98.73	95.62	388	WP_063855881.1	tetracycline efflux MFS transporter Tet(41)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP071230.1	2615276	2616442
GCA_017299315.1	GCA_017299315.1_02612	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	91	102	90.20	71.58	95	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP071230.1	2705511	2705786
GCA_017299315.1	GCA_017299315.1_02626	ssmE	multidrug efflux SMR transporter SsmE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	106	110	96.36	100.00	106	BAF80121.1	multidrug efflux SMR transporter SsmE	NA	NA	CP071230.1	2720914	2721234
GCA_017299315.1	GCA_017299315.1_02728	smfY	multidrug efflux MFS transporter SmfY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	490	490	100.00	98.37	490	BAE79899.1	multidrug efflux MFS transporter SmfY	NA	NA	CP071230.1	2836700	2838172
GCA_017299315.1	GCA_017299315.1_02875	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	139	98.56	67.15	137	WP_004857515.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP071230.1	2978266	2978673
GCA_017299315.1	GCA_017299315.1_04301	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	146	146	100.00	100.00	146	WP_033639326.1	aminoglycoside 6-N-acetyltransferase	NF000021.4	aminoglycoside 6-N-acetyltransferase	CP071230.1	4464225	4464665
GCA_017299315.1	GCA_017299315.1_04797	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	81.27	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP071230.1	4987017	4987919
GCA_030229005.1	GCA_030229005.1_00145	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JASPIC010000012.1	18243	18689
GCA_030229005.1	GCA_030229005.1_00162	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPIC010000012.1	30454	31875
GCA_030229005.1	GCA_030229005.1_00166	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.89	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPIC010000012.1	33603	34457
GCA_030229005.1	GCA_030229005.1_00526	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	216	87.50	46.15	195	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JASPIC010000019.1	32393	33046
GCA_030229005.1	GCA_030229005.1_00527	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPIC010000019.1	33081	34505
GCA_021189295.1	GCA_021189295.1_01517	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JAIBNN010000002.1	260493	260990
GCA_021189295.1	GCA_021189295.1_01548	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAIBNN010000002.1	291416	292708
GCA_021189295.1	GCA_021189295.1_02076	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAIBNN010000004.1	182681	184687
GCA_021189295.1	GCA_021189295.1_02077	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JAIBNN010000004.1	184787	185773
GCA_021189295.1	GCA_021189295.1_02178	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JAIBNN010000005.1	85301	85942
GCA_021189295.1	GCA_021189295.1_02403	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAIBNN010000008.1	16343	17188
GCA_021189295.1	GCA_021189295.1_02404	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.63	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAIBNN010000008.1	17295	19052
GCA_021189295.1	GCA_021189295.1_02405	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAIBNN010000008.1	19042	19422
GCA_021189295.1	GCA_021189295.1_02407	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAIBNN010000008.1	20510	21976
GCA_021189295.1	GCA_021189295.1_02475	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645013.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAIBNN010000011.1	539	1024
GCA_021189295.1	GCA_021189295.1_02476	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAIBNN010000012.1	1330	1653
GCA_938011375.1	GCA_938011375.1_00262	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	92.48	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CALLUC010000011.1	3739	5217
GCA_013267495.1	GCA_013267495.1_00475	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP053998.1	520144	520881
GCA_013267495.1	GCA_013267495.1_00476	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP053998.1	521988	523907
GCA_018289135.1	GCA_018289135.1_00152	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	79.17	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP072216.1	170242	171123
GCA_018289135.1	GCA_018289135.1_00312	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	99.59	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	CP072216.1	339554	340288
GCA_018289135.1	GCA_018289135.1_01769	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.10	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP072216.1	2004873	2006204
GCA_018289135.1	GCA_018289135.1_03967	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP072216.1	4640628	4642553
GCA_008693065.1	GCA_008693065.1_01565	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	VXKH01000040.1	8955	9770
GCA_008693065.1	GCA_008693065.1_01568	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	VXKH01000040.1	11071	11874
GCA_008693065.1	GCA_008693065.1_01569	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	VXKH01000040.1	11874	12710
GCA_008693065.1	GCA_008693065.1_01571	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VXKH01000040.1	12914	14089
GCA_008693065.1	GCA_008693065.1_01895	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.59	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VXKH01000066.1	1046	1900
GCA_008693065.1	GCA_008693065.1_02222	blaTEM	TEM family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	221	286	77.27	100.00	221	WP_000027050.1	broad-spectrum class A beta-lactamase TEM-116	NF033103.1	class A beta-lactamase	VXKH01000154.1	38	703
GCA_031158775.1	GCA_031158775.1_02272	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAVIFD010000044.1	2043	2453
GCA_031158775.1	GCA_031158775.1_02301	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAVIFD010000046.1	791	1645
GCA_000193025.2	GCA_000193025.2_01656	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	AERJ01000003.1	54587	55528
GCA_001814205.1	GCA_001814205.1_00318	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV815277.1	138187	139827
GCA_916048225.1	GCA_916048225.1_01635	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAJZGV010000074.1	7184	8374
GCA_916048225.1	GCA_916048225.1_02115	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	392	321	93.15	100.00	299	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAJZGV010000153.1	4	1182
GCA_007830595.1	GCA_007830595.1_01058	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	144	100.00	63.19	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	VLLD01000005.1	27026	27460
GCA_009717715.1	GCA_009717715.1_00360	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.64	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMZC01000001.1	422801	424525
GCA_009717715.1	GCA_009717715.1_00361	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.97	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMZC01000001.1	424527	426263
GCA_009717715.1	GCA_009717715.1_00796	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMZC01000001.1	887771	889234
GCA_009717715.1	GCA_009717715.1_00797	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMZC01000001.1	889354	890571
GCA_001070445.1	GCA_001070445.1_00690	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JVVK01000062.1	22434	22862
GCA_001070445.1	GCA_001070445.1_00739	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.74	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVVK01000063.1	28683	30407
GCA_001070445.1	GCA_001070445.1_00740	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.49	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVVK01000063.1	30409	32145
GCA_001070445.1	GCA_001070445.1_01817	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	470	631	73.38	74.95	463	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVVK01000107.1	157	1569
GCA_001070445.1	GCA_001070445.1_01844	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_004632336.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JVVK01000108.1	25484	27403
GCA_001070445.1	GCA_001070445.1_01845	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JVVK01000108.1	28510	29247
GCA_001070445.1	GCA_001070445.1_01928	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVVK01000118.1	1512	3170
GCA_027693505.1	GCA_027693505.1_00869	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JAQEYB010000020.1	2248	2760
GCA_027693505.1	GCA_027693505.1_00870	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JAQEYB010000020.1	2785	3990
GCA_027693505.1	GCA_027693505.1_01627	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAQEYB010000033.1	31949	32914
GCA_027693505.1	GCA_027693505.1_01941	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	307	266	100.00	93.23	266	WP_002682030.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQEYB010000004.1	73625	74548
GCA_027693505.1	GCA_027693505.1_02884	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	89.85	266	WP_002682030.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQEYB010000074.1	261	1061
GCA_027693505.1	GCA_027693505.1_03188	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	332	641	51.79	99.10	332	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	JAQEYB010000093.1	80	1078
GCA_024758245.1	GCA_024758245.1_03406	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103079.1	3997553	3999478
GCA_947055995.1	GCA_947055995.1_00882	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	286	307	95.44	42.86	294	WP_003178584.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CAMSBT010000061.1	3943	4803
GCA_001697725.1	GCA_001697725.1_00089	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016665.1	94645	95550
GCA_001697725.1	GCA_001697725.1_00217	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016665.1	229903	231141
GCA_001697725.1	GCA_001697725.1_00218	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016665.1	231549	232181
GCA_001697725.1	GCA_001697725.1_00220	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016665.1	233006	234574
GCA_001697725.1	GCA_001697725.1_00420	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016665.1	444766	446292
GCA_001697725.1	GCA_001697725.1_01461	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016665.1	1506057	1507436
GCA_915063715.1	GCA_915063715.1_00476	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAJZDK010000008.1	22269	23909
GCA_025148845.1	GCA_025148845.1_00973	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.02	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXRO010000170.1	477	1877
GCA_025148845.1	GCA_025148845.1_02132	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.85	41.31	472	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXRO010000043.1	1323	2717
GCA_018127765.1	GCA_018127765.1_01664	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072330.1	1886330	1887520
GCA_030176695.1	GCA_030176695.1_00991	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUD010000022.1	16085	16939
GCA_024399415.1	GCA_024399415.1_01042	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP029257.1	1046987	1047415
GCA_001812225.1	GCA_001812225.1_01395	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.95	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	KV808243.1	27070	28449
GCA_004127205.1	GCA_004127205.1_00141	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.91	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	QEWI01000001.1	110799	112523
GCA_004127205.1	GCA_004127205.1_00142	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	QEWI01000001.1	112525	114261
GCA_004127205.1	GCA_004127205.1_00758	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	QEWI01000001.1	710732	711160
GCA_001053435.1	GCA_001053435.1_01236	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JVTL01000079.1	1379	2233
GCA_001053435.1	GCA_001053435.1_02013	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JVTL01000017.1	1897	3816
GCA_001053435.1	GCA_001053435.1_02032	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVTL01000022.1	3219	4661
GCA_000180515.2	GCA_000180515.2_01458	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	HE983624.1	1278187	1279386
GCA_001808875.1	GCA_001808875.1_00606	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	KV794900.1	13357	14736
GCA_002847925.1	GCA_002847925.1_00711	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	639	99.69	99.84	637	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	PKHW01000002.1	63517	65439
GCA_030440055.1	GCA_030440055.1_00815	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQFJI010000020.1	5764	6981
GCA_030440055.1	GCA_030440055.1_00816	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQFJI010000020.1	7101	8564
GCA_030440055.1	GCA_030440055.1_01551	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQFJI010000006.1	8706	9134
GCA_000253155.1	GCA_000253155.1_01866	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.90	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	FR720602.1	1836631	1838550
GCA_000253155.1	GCA_000253155.1_01867	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	FR720602.1	1839657	1840394
GCA_019329625.1	GCA_019329625.1_00835	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073852.1	811090	811575
GCA_019329625.1	GCA_019329625.1_00838	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073852.1	813331	814770
GCA_019329625.1	GCA_019329625.1_00959	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073852.1	890398	891039
GCA_019329625.1	GCA_019329625.1_00980	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073852.1	909859	910704
GCA_019329625.1	GCA_019329625.1_00981	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073852.1	910811	912568
GCA_019329625.1	GCA_019329625.1_00982	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073852.1	912558	912938
GCA_019329625.1	GCA_019329625.1_02469	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073852.1	2428018	2429085
GCA_019329625.1	GCA_019329625.1_02520	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073852.1	2486883	2487119
GCA_019329625.1	GCA_019329625.1_02597	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073852.1	2569757	2570104
GCA_019329625.1	GCA_019329625.1_02600	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073852.1	2572273	2573571
GCA_019329625.1	GCA_019329625.1_02610	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073852.1	2582357	2583007
GCA_019329625.1	GCA_019329625.1_02611	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073852.1	2583089	2584732
GCA_019329625.1	GCA_019329625.1_02612	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073852.1	2584790	2585128
GCA_019329625.1	GCA_019329625.1_02660	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073853.1	388	948
GCA_019329625.1	GCA_019329625.1_02673	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	PARTIALP	441	514	85.80	99.55	441	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073853.1	12229	13554
GCA_002206065.1	GCA_002206065.1_00028	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	ASYN01000001.1	30699	32624
GCA_024586525.1	GCA_024586525.1_00754	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAMFTP010000014.1	515	1351
GCA_024586525.1	GCA_024586525.1_00756	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAMFTP010000014.1	1555	2730
GCA_024586525.1	GCA_024586525.1_01452	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_063856405.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAMFTP010000027.1	325	2244
GCA_024586525.1	GCA_024586525.1_01507	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAMFTP010000003.1	43807	44661
GCA_015556735.1	GCA_015556735.1_00116	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JADNNA010000012.1	2741	3706
GCA_015556735.1	GCA_015556735.1_01782	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	170	170	100.00	99.41	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JADNNA010000003.1	508179	508691
GCA_015556735.1	GCA_015556735.1_01783	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JADNNA010000003.1	508716	509921
GCA_000283035.1	GCA_000283035.1_01023	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	ALIY01000109.1	789	1643
GCA_017167825.1	GCA_017167825.1_00467	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFDPC010000001.1	7367	8791
GCA_007475365.1	GCA_007475365.1_00715	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	403	399	100.00	90.73	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP034442.1	704995	706206
GCA_018372295.1	GCA_018372295.1_00200	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHAJH010000002.1	81743	82933
GCA_025145695.1	GCA_025145695.1_01395	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALXLN010000018.1	7	852
GCA_025145695.1	GCA_025145695.1_01396	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALXLN010000018.1	959	2716
GCA_025145695.1	GCA_025145695.1_01397	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALXLN010000018.1	2706	3086
GCA_025145695.1	GCA_025145695.1_01399	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALXLN010000018.1	4174	5640
GCA_025145695.1	GCA_025145695.1_01433	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALXLN010000002.1	36390	37682
GCA_025145695.1	GCA_025145695.1_01741	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JALXLN010000021.1	1094	4168
GCA_025145695.1	GCA_025145695.1_01756	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JALXLN010000026.1	129	452
GCA_025145695.1	GCA_025145695.1_02554	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALXLN010000009.1	36809	38101
GCA_025145695.1	GCA_025145695.1_02558	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALXLN010000009.1	41784	42131
GCA_000222725.2	GCA_000222725.2_00718	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	AFUC01000013.1	303030	304754
GCA_000222725.2	GCA_000222725.2_00719	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	AFUC01000013.1	304756	306492
GCA_000197875.1	GCA_000197875.1_01018	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	FQ670178.1	949747	951141
GCA_003492775.1	GCA_003492775.1_00575	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQLQ01000002.1	74504	75409
GCA_003492775.1	GCA_003492775.1_01884	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQLQ01000008.1	68288	69526
GCA_003492775.1	GCA_003492775.1_01885	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	283	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQLQ01000008.1	69556	70407
GCA_003492775.1	GCA_003492775.1_02005	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQLQ01000010.1	14301	15827
GCA_029027845.1	GCA_029027845.1_00262	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	267	268	99.63	62.59	270	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP094361.1	228148	228951
GCA_029027845.1	GCA_029027845.1_00304	mphK	macrolide 2-phosphotransferase MphK	core	AMR	AMR	MACROLIDE	TELITHROMYCIN/TYLOSIN	EXACTP	306	306	100.00	100.00	306	WP_003246254.1	macrolide 2-phosphotransferase MphK	NA	NA	CP094361.1	275437	276357
GCA_029027845.1	GCA_029027845.1_00644	vmlR	ABC-F type ribosomal protection protein VmlR	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOMYCIN/TIAMULIN/VIRGINIAMYCIN M	EXACTP	547	547	100.00	100.00	547	WP_003234144.1	ABC-F type ribosomal protection protein VmlR	NA	NA	CP094361.1	604334	605977
GCA_029027845.1	GCA_029027845.1_01960	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	144	140	100.00	75.00	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP094361.1	1916257	1916691
GCA_029027845.1	GCA_029027845.1_02066	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	309	98.06	66.99	306	WP_011053164.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	CP094361.1	2043756	2044676
GCA_029027845.1	GCA_029027845.1_02808	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	139	139	100.00	100.00	139	CAB14519.1	thioredoxin-dependent arsenate reductase	NA	NA	CP094361.1	2650539	2650958
GCA_029027845.1	GCA_029027845.1_02809	acr3	arsenite efflux transporter Acr3	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	346	346	100.00	100.00	346	CAB14520.2	arsenite efflux transporter Acr3	NA	NA	CP094361.1	2650970	2652010
GCA_029027845.1	GCA_029027845.1_02910	aadK	aminoglycoside 6-adenylyltransferase AadK	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	284	284	100.00	100.00	284	WP_003229862.1	aminoglycoside 6-adenylyltransferase AadK	NF000312.1	aminoglycoside 6-adenylyltransferase AadK	CP094361.1	2730900	2731754
GCA_029027845.1	GCA_029027845.1_04400	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	173	173	100.00	100.00	173	WP_003242546.1	streptothricin N-acetyltransferase SatA	NA	NA	CP094361.1	4180055	4180576
GCA_029027845.1	GCA_029027845.1_04403	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_003242953.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP094361.1	4182576	4183952
GCA_000426405.1	GCA_000426405.1_02202	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	137	121	100.00	43.31	127	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AUFH01000014.1	16035	16448
GCA_000232445.2	GCA_000232445.2_01186	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AGOT01000001.1	134078	135541
GCA_000232445.2	GCA_000232445.2_01188	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AGOT01000001.1	135768	136985
GCA_000232445.2	GCA_000232445.2_01974	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AGOT01000001.1	875417	876616
GCA_000191505.1	GCA_000191505.1_00339	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.02	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP002423.1	336277	337803
GCA_000191505.1	GCA_000191505.1_00534	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP002423.1	540450	542018
GCA_000191505.1	GCA_000191505.1_00536	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP002423.1	542842	543474
GCA_000191505.1	GCA_000191505.1_00537	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.06	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP002423.1	543877	545115
GCA_000191505.1	GCA_000191505.1_00658	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP002423.1	676591	677496
GCA_000191505.1	GCA_000191505.1_01407	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP002423.1	1454461	1455840
GCA_000494875.1	GCA_000494875.1_00503	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP004014.1	522743	523384
GCA_000494875.1	GCA_000494875.1_01042	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP004014.1	1000923	1002215
GCA_025558345.1	GCA_025558345.1_01864	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	77.86	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094713.1	1898197	1899489
GCA_007672735.1	GCA_007672735.1_02232	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VDTF01000007.1	164428	165852
GCA_001697545.1	GCA_001697545.1_00257	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016656.1	241533	242912
GCA_001697545.1	GCA_001697545.1_01311	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016656.1	1317798	1319324
GCA_001697545.1	GCA_001697545.1_01510	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016656.1	1528853	1530421
GCA_001697545.1	GCA_001697545.1_01512	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016656.1	1531246	1531878
GCA_001697545.1	GCA_001697545.1_01513	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016656.1	1532286	1533524
GCA_001697545.1	GCA_001697545.1_01638	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016656.1	1667446	1668351
GCA_022689325.1	GCA_022689325.1_00105	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	PARTIALP	465	514	87.74	99.33	451	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCXM010000012.1	26387	27784
GCA_022689325.1	GCA_022689325.1_01201	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXM010000002.1	136793	138085
GCA_022689325.1	GCA_022689325.1_01350	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXM010000002.1	297643	298716
GCA_022689325.1	GCA_022689325.1_01979	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXM010000004.1	46711	47130
GCA_023277565.1	GCA_023277565.1_01199	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.84	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP083169.1	1481462	1482940
GCA_001070265.1	GCA_001070265.1_00311	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417517.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JWCQ01000115.1	8650	9867
GCA_001070265.1	GCA_001070265.1_00312	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420317.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JWCQ01000115.1	9987	11450
GCA_001070265.1	GCA_001070265.1_01003	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JWCQ01000038.1	28347	30266
GCA_963394955.1	GCA_963394955.1_01299	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CAUJPT010000015.1	27571	29139
GCA_900543655.1	GCA_900543655.1_00741	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	123	123	100.00	50.00	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UQSN01000006.1	57485	57856
GCA_900543655.1	GCA_900543655.1_01653	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	UQSN01000040.1	908	1474
GCA_900543655.1	GCA_900543655.1_01654	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	UQSN01000040.1	1652	3196
GCA_002578825.1	GCA_002578825.1_02247	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NBIP01000008.1	24420	24830
GCA_002999035.1	GCA_002999035.1_01470	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_003505402.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP027241.1	1607123	1609042
GCA_002847745.1	GCA_002847745.1_00190	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PKGS01000001.1	207594	209234
GCA_002847745.1	GCA_002847745.1_00714	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	100.00	45.53	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	PKGS01000002.1	22228	22593
GCA_002847745.1	GCA_002847745.1_01624	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	PKGS01000005.1	123827	124558
GCA_003943675.1	GCA_003943675.1_01369	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJQB01000005.1	53337	54554
GCA_003943675.1	GCA_003943675.1_01370	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJQB01000005.1	54674	56137
GCA_003943675.1	GCA_003943675.1_01376	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	59.85	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJQB01000005.1	58667	59095
GCA_000160635.1	GCA_000160635.1_01327	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.87	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	GG668534.1	684252	685730
GCA_000160635.1	GCA_000160635.1_01418	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	GG668534.1	776808	777230
GCA_001812045.1	GCA_001812045.1_00420	tet(65)	tetracycline efflux MFS transporter Tet(65)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	384	383	100.00	99.74	383	WP_152609570.1	tetracycline efflux MFS transporter Tet(65)	NF045684.1	tetracycline efflux MFS transporter Tet(65)	KV807504.1	98695	99849
GCA_001812045.1	GCA_001812045.1_02112	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	297	264	95.83	60.87	253	WP_000572405.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	KV807509.1	355950	356843
GCA_001812045.1	GCA_001812045.1_02126	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	387	392	95.41	53.99	376	WP_003971483.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	KV807509.1	372233	373396
GCA_001812045.1	GCA_001812045.1_02220	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	392	100.00	51.39	395	WP_003971483.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	KV807509.1	467801	468976
GCA_019375525.1	GCA_019375525.1_02468	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCC010000007.1	103950	105140
GCA_019375525.1	GCA_019375525.1_02637	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	163	321	50.78	100.00	163	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NA	NA	JAHXCC010000008.1	163432	163923
GCA_001838575.1	GCA_001838575.1_00550	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV837626.1	114073	115992
GCA_001838575.1	GCA_001838575.1_01129	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV837632.1	140251	141468
GCA_001838575.1	GCA_001838575.1_01130	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV837632.1	141588	143051
GCA_024295645.1	GCA_024295645.1_00672	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPJ010000001.1	709319	710536
GCA_024295645.1	GCA_024295645.1_00673	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPJ010000001.1	710656	712119
GCA_015547645.1	GCA_015547645.1_00119	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JADMVN010000010.1	146576	147541
GCA_015547645.1	GCA_015547645.1_01608	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	97.35	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JADMVN010000035.1	3845	5770
GCA_013694365.1	GCA_013694365.1_02110	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP059275.1	1788526	1789176
GCA_013694365.1	GCA_013694365.1_02111	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	248	248	100.00	99.19	248	WP_063844850.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP059275.1	1789177	1789923
GCA_013694365.1	GCA_013694365.1_02116	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	639	99.84	99.37	638	WP_003672618.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP059275.1	1791613	1793538
GCA_013694365.1	GCA_013694365.1_02163	aadE	aminoglycoside 6-adenylyltransferase AadE	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	288	288	100.00	100.00	288	WP_001255868.1	aminoglycoside 6-adenylyltransferase AadE	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP059275.1	1830881	1831747
GCA_013694365.1	GCA_013694365.1_02173	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_001829870.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CP059275.1	1838597	1839082
GCA_030182205.1	GCA_030182205.1_00327	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	PARTIALP	201	271	74.17	99.00	201	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	JARXSV010000151.1	1179	1784
GCA_005888215.1	GCA_005888215.1_00650	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LNKO01000043.1	24630	26024
GCA_022487725.1	GCA_022487725.1_00249	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKVHE010000013.1	39854	41320
GCA_022487725.1	GCA_022487725.1_00384	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKVHE010000018.1	1685	2065
GCA_022487725.1	GCA_022487725.1_00385	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKVHE010000018.1	2055	3812
GCA_022487725.1	GCA_022487725.1_00386	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKVHE010000018.1	3919	4764
GCA_022487725.1	GCA_022487725.1_00941	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKVHE010000024.1	2516	4522
GCA_022487725.1	GCA_022487725.1_00942	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	332	585	55.73	99.08	326	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JAKVHE010000024.1	4622	5620
GCA_022487725.1	GCA_022487725.1_00966	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAKVHE010000029.1	586	1071
GCA_022487725.1	GCA_022487725.1_01317	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JAKVHE010000031.1	392	1135
GCA_022487725.1	GCA_022487725.1_01318	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JAKVHE010000031.1	1352	1756
GCA_022487725.1	GCA_022487725.1_01609	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.17	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVHE010000003.1	281304	282596
GCA_022487725.1	GCA_022487725.1_01610	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVHE010000003.1	282614	283006
GCA_022487725.1	GCA_022487725.1_01618	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKVHE010000003.1	291922	292269
GCA_022487725.1	GCA_022487725.1_01622	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVHE010000003.1	294435	295724
GCA_009828055.1	GCA_009828055.1_01117	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	310	309	92.88	40.48	289	WP_063864599.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	WTYB01000001.1	1104514	1105446
GCA_009828055.1	GCA_009828055.1_02129	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	311	310	99.35	66.02	309	WP_256875606.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	WTYB01000002.1	823704	824639
GCA_013267675.1	GCA_013267675.1_00147	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP053957.1	144462	144884
GCA_013267675.1	GCA_013267675.1_00199	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP053957.1	204077	205150
GCA_013267675.1	GCA_013267675.1_00962	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP053957.1	933819	935108
GCA_013267675.1	GCA_013267675.1_02241	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP053957.1	2184783	2185178
GCA_013267675.1	GCA_013267675.1_02242	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.74	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP053957.1	2185195	2186487
GCA_013267675.1	GCA_013267675.1_02246	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP053957.1	2190170	2190517
GCA_013267675.1	GCA_013267675.1_02571	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	PARTIALP	264	522	50.57	100.00	264	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NA	NA	CP053960.1	266	1060
GCA_003992185.1	GCA_003992185.1_00826	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RQVH01000008.1	50455	52374
GCA_018289315.1	GCA_018289315.1_03446	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP072229.1	4005445	4007370
GCA_022346965.1	GCA_022346965.1_01668	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	273	274	98.91	62.73	271	WP_122630910.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	JAKREH010000053.1	164	985
GCA_000524235.1	GCA_000524235.1_01064	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.43	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JANA01000053.1	32509	33987
GCA_000524235.1	GCA_000524235.1_01554	blaOXA-85	oxacillin-hydrolyzing class D beta-lactamase OXA-85	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	261	261	100.00	100.00	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	JANA01000064.1	2767	3552
GCA_900447625.1	GCA_900447625.1_01242	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UFYO01000001.1	1266686	1268128
GCA_018127945.1	GCA_018127945.1_00014	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072351.1	23502	24692
GCA_024498415.1	GCA_024498415.1_01056	ymoA	expression modulating protein YmoA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	67	67	100.00	100.00	67	AAQ90017.1	expression modulating protein YmoA	NA	NA	CP084343.1	1122869	1123072
GCA_024498415.1	GCA_024498415.1_01567	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	121	102	100.00	52.46	122	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP084343.1	1636181	1636546
GCA_024498415.1	GCA_024498415.1_02147	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	600	600	100.00	100.00	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP084343.1	2223041	2224843
GCA_024498415.1	GCA_024498415.1_02148	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	600	600	100.00	100.00	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP084343.1	2224830	2226632
GCA_024498415.1	GCA_024498415.1_02555	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	96	102	97.06	49.07	108	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP084343.1	2654384	2654674
GCA_024498415.1	GCA_024498415.1_02688	yfeA	iron/manganese ABC transporter substrate-binding protein YfeA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	322	322	100.00	100.00	322	AAC46147.1	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	CP084343.1	2786794	2787762
GCA_024498415.1	GCA_024498415.1_02689	yfeB	iron/manganese ABC transporter ATP-binding protein YfeB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	296	296	100.00	100.00	296	AAC46148.1	iron/manganese ABC transporter ATP-binding protein YfeB	NA	NA	CP084343.1	2787759	2788649
GCA_024498415.1	GCA_024498415.1_02691	yfeD	iron/manganese ABC transporter permease subunit YfeD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	297	100.00	99.66	297	AAC46150.1	iron/manganese ABC transporter permease subunit YfeD	NA	NA	CP084343.1	2789530	2790423
GCA_024498415.1	GCA_024498415.1_04462	yopO	type III secretion system effector protein kinase YopO/YpkA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	729	100.00	97.26	729	CFQ25321.1	type III secretion system effector protein kinase YopO/YpkA	NA	NA	CP084345.1	17138	19336
GCA_024498415.1	GCA_024498415.1_04463	yopJ	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	288	288	100.00	99.65	288	AKN09807.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	NF040632.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	CP084345.1	19732	20598
GCA_024498415.1	GCA_024498415.1_04465	yopH	T3SS effector protein-tyrosine-phosphatase YopH	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	468	468	100.00	98.50	468	AJJ21453.1	T3SS effector protein-tyrosine-phosphatase YopH	NA	NA	CP084345.1	22281	23687
GCA_024498415.1	GCA_024498415.1_04482	virF	virulence regulon transcriptional activator VirF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	271	271	100.00	97.79	271	AAD16833.1	virulence regulon transcriptional activator VirF	NA	NA	CP084345.1	37164	37979
GCA_024498415.1	GCA_024498415.1_04501	lcrV	type III secretion system needle tip protein LcrV	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	326	329	99.70	96.04	328	CNC59088.1	type III secretion system needle tip protein LcrV	NA	NA	CP084345.1	51176	52156
GCA_024498415.1	GCA_024498415.1_04503	yopB	type III secretion system translocon subunit YopB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	401	401	100.00	96.26	401	AAK69211.1	type III secretion system translocon subunit YopB	NA	NA	CP084345.1	52653	53858
GCA_024498415.1	GCA_024498415.1_04504	yopD	type III secretion system translocon subunit YopD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	306	100.00	97.71	306	AAK69210.1	type III secretion system translocon subunit YopD	NA	NA	CP084345.1	53877	54797
GCA_024498415.1	GCA_024498415.1_04511	yopT	T3SS effector cysteine protease YopT	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	322	322	100.00	92.55	322	AJJ21466.1	T3SS effector cysteine protease YopT	NA	NA	CP084345.1	60513	61481
GCA_024498415.1	GCA_024498415.1_04524	yopE	type III secretion system effector GTPase activator YopE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	219	219	100.00	94.06	219	AJJ21471.1	type III secretion system effector GTPase activator YopE	NA	NA	CP084345.1	69833	70492
GCA_015547285.1	GCA_015547285.1_01468	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_003505402.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JADMUU010000035.1	1284	3203
GCA_015547285.1	GCA_015547285.1_01759	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.75	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JADMUU010000004.1	64922	66841
GCA_015547285.1	GCA_015547285.1_01768	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JADMUU010000004.1	75633	76370
GCA_015547285.1	GCA_015547285.1_01774	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JADMUU010000004.1	81681	83159
GCA_024104415.1	GCA_024104415.1_01205	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHAVG010000024.1	2727	4733
GCA_024104415.1	GCA_024104415.1_01673	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHAVG010000003.1	140406	140825
GCA_024104415.1	GCA_024104415.1_01925	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHAVG010000004.1	176077	177369
GCA_024104415.1	GCA_024104415.1_01932	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHAVG010000005.1	985	2058
GCA_003351405.1	GCA_003351405.1_01430	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031240.1	1457212	1458606
GCA_014843395.1	GCA_014843395.1_00113	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	407	398	94.97	55.38	381	WP_063855886.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP062121.1	124681	125904
GCA_014843395.1	GCA_014843395.1_00942	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	124	144	70.14	45.54	101	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP062121.1	1057152	1057526
GCA_014843395.1	GCA_014843395.1_01321	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	82.52	57.63	118	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP062121.1	1508075	1508470
GCA_014843395.1	GCA_014843395.1_02370	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	295	295	100.00	75.59	295	WP_063842263.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP062121.1	2620359	2621246
GCA_900654175.1	GCA_900654175.1_00851	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAACAC010000007.1	74592	75971
GCA_025558705.1	GCA_025558705.1_00044	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP094731.1	46676	47161
GCA_025558705.1	GCA_025558705.1_00050	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP094731.1	50915	52921
GCA_025558705.1	GCA_025558705.1_00051	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP094731.1	53021	54007
GCA_025558705.1	GCA_025558705.1_00066	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	CP094731.1	68242	68880
GCA_025558705.1	GCA_025558705.1_00113	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	432	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094731.1	109965	111263
GCA_025558705.1	GCA_025558705.1_00116	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	91	121	75.21	48.35	91	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP094731.1	113504	113779
GCA_025558705.1	GCA_025558705.1_00199	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	94.37	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP094731.1	216912	217340
GCA_025558705.1	GCA_025558705.1_02269	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094731.1	2301528	2302820
GCA_025558705.1	GCA_025558705.1_02491	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP094732.1	165	545
GCA_025558705.1	GCA_025558705.1_02500	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP094732.1	10113	10958
GCA_001747495.1	GCA_001747495.1_01208	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	292	100.00	64.51	293	WP_002977989.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	MKGI01000009.1	35621	36502
GCA_001747495.1	GCA_001747495.1_01711	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	295	99.32	84.01	294	WP_064964747.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	MKGI01000022.1	1056	1940
GCA_001747495.1	GCA_001747495.1_01989	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	68.42	266	WP_006745469.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	MKGI01000035.1	316	1116
GCA_001747495.1	GCA_001747495.1_02520	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	MKGI01000052.1	187	1050
GCA_022345795.1	GCA_022345795.1_01331	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.04	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRDS010000002.1	129367	130791
GCA_022345795.1	GCA_022345795.1_01335	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	43.90	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKRDS010000002.1	133224	133592
GCA_024758425.1	GCA_024758425.1_02149	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	300	96.00	75.09	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103081.1	2550574	2551464
GCA_024758425.1	GCA_024758425.1_02942	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	94.58	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103081.1	3379341	3380672
GCA_022240605.1	GCA_022240605.1_01326	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKOGN010000003.1	27734	28162
GCA_022240605.1	GCA_022240605.1_01375	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAKOGN010000003.1	70612	72090
GCA_003367495.1	GCA_003367495.1_02509	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	148	97.30	55.56	144	WP_128470137.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	PXXY01000030.1	9390	9824
GCA_003367495.1	GCA_003367495.1_03766	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	215	100.00	68.84	215	WP_035203840.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	PXXY01000006.1	99281	99928
GCA_003367495.1	GCA_003367495.1_03817	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	80.69	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	PXXY01000006.1	151169	152647
GCA_003367495.1	GCA_003367495.1_04078	msr	Msr family ABC-F type ribosomal protection protein	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	482	485	99.18	72.35	481	WP_101035417.1	Msr family ABC-F type ribosomal protection protein	NF000168.2	Msr family ABC-F type ribosomal protection protein	PXXY01000007.1	52773	54221
GCA_003367495.1	GCA_003367495.1_04175	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	141	142	97.18	77.54	138	WP_204376221.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	PXXY01000007.1	131693	132118
GCA_003367495.1	GCA_003367495.1_04388	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	228	232	98.71	71.74	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	PXXY01000009.1	39161	39847
GCA_002865925.1	GCA_002865925.1_00104	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	LBCN01000010.1	1142	1561
GCA_002865925.1	GCA_002865925.1_00105	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	154	278	50.72	100.00	141	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	LBCN01000010.1	1561	2025
GCA_002865925.1	GCA_002865925.1_00108	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	LBCN01000010.1	2599	3774
GCA_002865925.1	GCA_002865925.1_00148	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	LBCN01000019.1	565	1740
GCA_002865925.1	GCA_002865925.1_00386	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	416	593	68.30	100.00	405	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	LBCN01000007.1	4408	5658
GCA_002865925.1	GCA_002865925.1_01792	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	466	593	77.74	100.00	461	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	LBCN01000003.1	2200	3600
GCA_002865925.1	GCA_002865925.1_02387	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	LBCN01000029.1	2580	3434
GCA_002865925.1	GCA_002865925.1_02924	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	LBCN01000006.1	435	1250
GCA_000180435.1	GCA_000180435.1_01438	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABC01000053.1	2767	4191
GCA_905372245.1	GCA_905372245.1_00075	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAJPOG010000002.1	1170	2366
GCA_019329805.1	GCA_019329805.1_00090	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073876.1	89852	91858
GCA_019329805.1	GCA_019329805.1_00091	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073876.1	91958	93715
GCA_019329805.1	GCA_019329805.1_00092	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073876.1	93715	94086
GCA_019329805.1	GCA_019329805.1_00138	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073876.1	133052	133390
GCA_019329805.1	GCA_019329805.1_00139	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073876.1	133448	135091
GCA_019329805.1	GCA_019329805.1_00140	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073876.1	135173	135823
GCA_019329805.1	GCA_019329805.1_00150	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073876.1	144609	145907
GCA_019329805.1	GCA_019329805.1_00153	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073876.1	148076	148423
GCA_019329805.1	GCA_019329805.1_00230	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073876.1	230899	231135
GCA_019329805.1	GCA_019329805.1_00281	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073876.1	288933	290000
GCA_019329805.1	GCA_019329805.1_01769	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073876.1	1805079	1805459
GCA_019329805.1	GCA_019329805.1_01770	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073876.1	1805449	1807206
GCA_019329805.1	GCA_019329805.1_01771	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073876.1	1807313	1808158
GCA_019329805.1	GCA_019329805.1_01792	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073876.1	1826978	1827619
GCA_019329805.1	GCA_019329805.1_01913	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073876.1	1903247	1904686
GCA_019329805.1	GCA_019329805.1_01916	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073876.1	1906442	1906927
GCA_019329805.1	GCA_019329805.1_02747	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073875.1	4596	6140
GCA_019329805.1	GCA_019329805.1_02748	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073875.1	6325	6885
GCA_022569175.1	GCA_022569175.1_01474	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKR010000003.1	98618	99910
GCA_022569175.1	GCA_022569175.1_01625	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKR010000003.1	259484	260557
GCA_022569175.1	GCA_022569175.1_02068	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKR010000004.1	286345	286764
GCA_009717535.1	GCA_009717535.1_00281	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.39	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	WMYT01000001.1	156931	158409
GCA_009717535.1	GCA_009717535.1_00552	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	WMYT01000001.1	452519	454438
GCA_009717535.1	GCA_009717535.1_00584	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMYT01000001.1	481472	483196
GCA_009717535.1	GCA_009717535.1_00585	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMYT01000001.1	483198	484934
GCA_009717535.1	GCA_009717535.1_02084	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYT01000009.1	17923	19386
GCA_009717535.1	GCA_009717535.1_02085	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYT01000009.1	19506	20723
GCA_030176875.1	GCA_030176875.1_00564	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASNVR010000017.1	31340	32515
GCA_030176875.1	GCA_030176875.1_01616	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.30	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVR010000004.1	133167	134021
GCA_002026425.1	GCA_002026425.1_00296	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LNVI01000001.1	262773	264065
GCA_013315215.1	GCA_013315215.1_00725	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JABUHA010000001.1	857341	858819
GCA_013315215.1	GCA_013315215.1_00863	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JABUHA010000001.1	1006285	1008204
GCA_001402725.1	GCA_001402725.1_01292	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	153	147	97.28	48.61	144	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	LLVV01000008.1	162297	162758
GCA_001554015.1	GCA_001554015.1_02419	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP014240.1	14793	15530
GCA_003492955.1	GCA_003492955.1_00811	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQLG01000002.1	342336	343241
GCA_003492955.1	GCA_003492955.1_01773	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQLG01000008.1	78402	79640
GCA_003492955.1	GCA_003492955.1_01774	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQLG01000008.1	79657	80520
GCA_003492955.1	GCA_003492955.1_01939	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQLG01000010.1	47571	49097
GCA_002763955.1	GCA_002763955.1_02468	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP024733.1	608182	610107
GCA_002763955.1	GCA_002763955.1_02527	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP024733.1	661486	662451
GCA_003496195.1	GCA_003496195.1_00669	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQDC01000003.1	73544	74449
GCA_003496195.1	GCA_003496195.1_01265	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQDC01000006.1	77493	78731
GCA_003496195.1	GCA_003496195.1_01266	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	95.71	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQDC01000006.1	78748	79611
GCA_003496195.1	GCA_003496195.1_01268	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQDC01000006.1	80403	81971
GCA_003496195.1	GCA_003496195.1_01662	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQDC01000009.1	14492	16018
GCA_007197715.1	GCA_007197715.1_00176	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	547	631	87.64	90.42	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP041626.1	168822	170465
GCA_007197715.1	GCA_007197715.1_00648	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP041626.1	637376	637750
GCA_007197715.1	GCA_007197715.1_01460	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP041626.1	1505440	1505844
GCA_007197715.1	GCA_007197715.1_01461	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP041626.1	1506061	1506804
GCA_000008805.1	GCA_000008805.1_00069	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	AE002098.2	75694	76428
GCA_000008805.1	GCA_000008805.1_00325	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	508	508	100.00	100.00	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	AE002098.2	330791	332317
GCA_000008805.1	GCA_000008805.1_00821	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.77	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	AE002098.2	837238	838617
GCA_000008805.1	GCA_000008805.1_01608	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	AE002098.2	1652842	1653747
GCA_000008805.1	GCA_000008805.1_01742	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	412	412	100.00	100.00	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	AE002098.2	1795182	1796420
GCA_000008805.1	GCA_000008805.1_01743	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	AE002098.2	1796823	1797455
GCA_000008805.1	GCA_000008805.1_01745	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.74	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	AE002098.2	1798278	1799846
GCA_028326565.1	GCA_028326565.1_00140	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMNB010000012.1	49644	51563
GCA_028326565.1	GCA_028326565.1_01730	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMNB010000007.1	5401	6132
GCA_003966625.1	GCA_003966625.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	AP018587.1	37016	39022
GCA_003966625.1	GCA_003966625.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	AP018587.1	39122	40108
GCA_003966625.1	GCA_003966625.1_00133	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	69.06	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AP018587.1	154631	155068
GCA_003966625.1	GCA_003966625.1_00197	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AP018587.1	235212	236285
GCA_003966625.1	GCA_003966625.1_00207	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	AP018587.1	244052	245491
GCA_003966625.1	GCA_003966625.1_00951	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AP018587.1	984013	984393
GCA_003966625.1	GCA_003966625.1_00952	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	94.70	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AP018587.1	984383	986140
GCA_003966625.1	GCA_003966625.1_00953	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AP018587.1	986247	987092
GCA_003966625.1	GCA_003966625.1_00978	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AP018587.1	1012880	1013725
GCA_003966625.1	GCA_003966625.1_00979	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.49	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AP018587.1	1013832	1015589
GCA_003966625.1	GCA_003966625.1_00980	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AP018587.1	1015579	1015959
GCA_003966625.1	GCA_003966625.1_00982	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP018587.1	1016265	1017554
GCA_003966625.1	GCA_003966625.1_01250	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	AP018587.1	1276899	1277681
GCA_003966625.1	GCA_003966625.1_01251	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	AP018587.1	1277807	1278538
GCA_007990525.1	GCA_007990525.1_01550	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	83.74	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AP019823.1	1591612	1593090
GCA_030644965.1	GCA_030644965.1_00734	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	301	301	100.00	100.00	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP130894.1	709449	710354
GCA_030644965.1	GCA_030644965.1_00853	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	99.51	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP130894.1	835502	836740
GCA_030644965.1	GCA_030644965.1_00854	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	210	210	100.00	100.00	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP130894.1	836990	837622
GCA_030644965.1	GCA_030644965.1_00856	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	99.43	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP130894.1	838259	839827
GCA_030644965.1	GCA_030644965.1_01203	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	507	100.00	99.41	507	AAD54074.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP130894.1	1164826	1166349
GCA_030644965.1	GCA_030644965.1_02140	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	459	459	100.00	100.00	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP130894.1	2074542	2075921
GCA_902376145.1	GCA_902376145.1_00833	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CABKWU010000006.1	982180	983145
GCA_902376145.1	GCA_902376145.1_00837	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CABKWU010000006.1	984933	985898
GCA_902376145.1	GCA_902376145.1_00841	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.38	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CABKWU010000006.1	987686	988651
GCA_008121405.1	GCA_008121405.1_00378	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	332	641	51.79	99.70	332	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	VKLY01000014.1	95823	96821
GCA_008121405.1	GCA_008121405.1_00879	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	321	321	99.07	83.65	318	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	VKLY01000001.1	162588	163553
GCA_008121405.1	GCA_008121405.1_01796	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	332	641	51.79	99.10	332	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	VKLY01000037.1	123	1121
GCA_008121405.1	GCA_008121405.1_01831	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	VKLY01000037.1	29643	30458
GCA_900445285.1	GCA_900445285.1_00392	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	123	123	100.00	50.79	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UFSY01000001.1	402815	403186
GCA_026782525.1	GCA_026782525.1_01521	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKUWT010000008.1	32318	32746
GCA_000252065.2	GCA_000252065.2_00314	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	AIKE01000005.1	54285	55022
GCA_000252065.2	GCA_000252065.2_00326	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	AIKE01000005.1	65815	66855
GCA_000252065.2	GCA_000252065.2_00331	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AIKE01000005.1	68581	70044
GCA_000252065.2	GCA_000252065.2_00332	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AIKE01000005.1	70164	71381
GCA_000252065.2	GCA_000252065.2_00989	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AIKE01000003.1	180754	181953
GCA_000252065.2	GCA_000252065.2_01083	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AIKE01000003.1	261913	262341
GCA_949769225.1	GCA_949769225.1_00411	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	125	120	100.00	47.20	125	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CATKPB010000002.1	103706	104083
GCA_949769225.1	GCA_949769225.1_00623	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CATKPB010000003.1	52444	54363
GCA_005890375.1	GCA_005890375.1_00428	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQP01000019.1	292	1713
GCA_005890375.1	GCA_005890375.1_01220	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	SOQP01000059.1	26069	27988
GCA_005890375.1	GCA_005890375.1_01257	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	SOQP01000059.1	58854	60317
GCA_005890375.1	GCA_005890375.1_01258	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	SOQP01000059.1	60338	61555
GCA_962715115.1	GCA_962715115.1_00201	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIXR010000002.1	21350	22255
GCA_962715115.1	GCA_962715115.1_00431	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIXR010000003.1	61963	63342
GCA_962715115.1	GCA_962715115.1_00901	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIXR010000006.1	81714	82952
GCA_962715115.1	GCA_962715115.1_00902	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	251	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIXR010000006.1	83069	83824
GCA_962715115.1	GCA_962715115.1_01129	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIXR010000009.1	18138	19664
GCA_002861345.1	GCA_002861345.1_02185	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PKHP01000008.1	11514	12935
GCA_008000975.1	GCA_008000975.1_00191	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	303	88.45	40.30	268	WP_041881964.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP042830.1	229051	229935
GCA_001061885.1	GCA_001061885.1_01639	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	129	120	99.17	39.53	129	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JWDO01000097.1	32443	32832
GCA_001045685.1	GCA_001045685.1_00430	mexA	multidrug efflux RND transporter periplasmic adaptor subunit MexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	383	383	100.00	100.00	383	AAA74436.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	NF033834.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	CP012001.1	463689	464840
GCA_001045685.1	GCA_001045685.1_00836	aph(3)-IIb	aminoglycoside O-phosphotransferase APH(3)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	267	268	100.00	99.25	268	WP_003113011.1	aminoglycoside O-phosphotransferase APH(3)-IIb	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP012001.1	882368	883171
GCA_001045685.1	GCA_001045685.1_00845	blaPDC-5	extended-spectrum class C beta-lactamase PDC-5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	397	397	100.00	100.00	397	WP_003119095.1	extended-spectrum class C beta-lactamase PDC-5	NF000422.6	PDC family class C beta-lactamase	CP012001.1	895525	896718
GCA_001045685.1	GCA_001045685.1_02567	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	414	414	100.00	100.00	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP012001.1	2685022	2686266
GCA_001045685.1	GCA_001045685.1_03100	mexX	multidrug efflux RND transporter periplasmic adaptor subunit MexX	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	396	396	100.00	99.24	396	AAF14522.1	multidrug efflux RND transporter periplasmic adaptor subunit MexX	NA	NA	CP012001.1	3298912	3300102
GCA_001045685.1	GCA_001045685.1_04038	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	135	135	100.00	99.26	135	WP_003082280.1	FosA family fosfomycin resistance glutathione transferase	NF000094.1	FosA family fosfomycin resistance glutathione transferase	CP012001.1	4303349	4303756
GCA_001045685.1	GCA_001045685.1_04522	catB7	type B-4 chloramphenicol O-acetyltransferase CatB7	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	212	212	100.00	98.58	212	WP_003112709.1	type B-4 chloramphenicol O-acetyltransferase CatB7	NF000490.1	type B chloramphenicol O-acetyltransferase	CP012001.1	4772280	4772918
GCA_001045685.1	GCA_001045685.1_05888	blaOXA-904	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-904	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	262	262	100.00	100.00	262	WP_003122322.1	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-904	NF000432.2	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase	CP012001.1	6258661	6259449
GCA_022689855.1	GCA_022689855.1_00370	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	JALCWM010000015.1	18386	19024
GCA_022689855.1	GCA_022689855.1_01302	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCWM010000002.1	295591	295971
GCA_022689855.1	GCA_022689855.1_01303	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCWM010000002.1	295961	297718
GCA_022689855.1	GCA_022689855.1_01304	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCWM010000002.1	297825	298670
GCA_022689855.1	GCA_022689855.1_01710	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWM010000004.1	171750	172097
GCA_022689855.1	GCA_022689855.1_01713	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWM010000004.1	174265	175554
GCA_905369805.1	GCA_905369805.1_00818	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAJPJO010000005.1	105390	106355
GCA_905369805.1	GCA_905369805.1_01774	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAJPJO010000015.1	12024	13214
GCA_015262445.1	GCA_015262445.1_01266	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	98.65	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZST010000003.1	39059	40249
GCA_001885995.1	GCA_001885995.1_02131	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	JXKT01000075.1	75	2189
GCA_003352385.1	GCA_003352385.1_01096	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031243.1	1111594	1112988
GCA_018367695.1	GCA_018367695.1_01719	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAGZFP010000018.1	29716	31452
GCA_018367695.1	GCA_018367695.1_01720	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAGZFP010000018.1	31454	33178
GCA_002096075.1	GCA_002096075.1_00140	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP020761.1	146246	147319
GCA_002096075.1	GCA_002096075.1_00289	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP020761.1	306753	308045
GCA_002096075.1	GCA_002096075.1_02214	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP020761.1	2227428	2227847
GCA_015838875.1	GCA_015838875.1_01232	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP046354.1	1172689	1173426
GCA_015838875.1	GCA_015838875.1_01243	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP046354.1	1183344	1185263
GCA_015838875.1	GCA_015838875.1_01313	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP046354.1	1244450	1245649
GCA_900186975.1	GCA_900186975.1_00498	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	148	120	100.00	48.39	124	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LT906441.1	600359	600805
GCA_900186975.1	GCA_900186975.1_00558	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LT906441.1	673584	674006
GCA_023109095.1	GCA_023109095.1_00574	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALDTX010000019.1	27454	29373
GCA_022485125.1	GCA_022485125.1_01087	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKVFD010000021.1	2048	2428
GCA_022485125.1	GCA_022485125.1_01098	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKVFD010000022.1	1115	2755
GCA_022485125.1	GCA_022485125.1_01655	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVFD010000004.1	6408	6809
GCA_022485125.1	GCA_022485125.1_01656	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFD010000004.1	6827	8116
GCA_022485125.1	GCA_022485125.1_01676	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	91.41	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVFD010000004.1	26627	27019
GCA_022485125.1	GCA_022485125.1_01677	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFD010000004.1	27037	28329
GCA_022485125.1	GCA_022485125.1_01758	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFD010000004.1	101731	103023
GCA_019703405.1	GCA_019703405.1_01603	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018766.1	1602172	1603566
GCA_001671545.1	GCA_001671545.1_01773	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	154	92.86	61.54	143	WP_015860243.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	LZTK01000001.1	1803227	1803646
GCA_001671545.1	GCA_001671545.1_02282	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	263	266	97.74	57.69	260	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	LZTK01000001.1	2336794	2337585
GCA_001671545.1	GCA_001671545.1_02686	tet(A)	tetracycline efflux MFS transporter Tet(A)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	399	399	100.00	100.00	399	WP_011645018.1	tetracycline efflux MFS transporter Tet(A)	NF012193.0	tetracycline efflux MFS transporter Tet(A)	LZTK01000005.1	8286	9485
GCA_001671545.1	GCA_001671545.1_02688	blaTEM-181	class A beta-lactamase TEM-181	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027060.1	class A beta-lactamase TEM-181	NF000531.2	TEM family class A beta-lactamase	LZTK01000005.1	10012	10872
GCA_001671545.1	GCA_001671545.1_05822	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	275	269	96.28	53.96	265	WP_338424127.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	LZTK01000012.1	153086	153913
GCA_000231985.2	GCA_000231985.2_01331	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AGNW01000002.1	428656	430446
GCA_011714735.1	GCA_011714735.1_00426	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	362	399	80.20	98.44	320	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXK01000016.1	20197	21285
GCA_013154915.1	GCA_013154915.1_01768	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	302	97.68	57.14	301	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP053553.1	1727438	1728328
GCA_003952325.1	GCA_003952325.1_01203	catB7	type B-4 chloramphenicol O-acetyltransferase CatB7	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	212	212	100.00	98.11	212	WP_003112709.1	type B-4 chloramphenicol O-acetyltransferase CatB7	NF000490.1	type B chloramphenicol O-acetyltransferase	CP034436.1	1293035	1293673
GCA_003952325.1	GCA_003952325.1_01672	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	135	135	100.00	100.00	135	WP_003082280.1	FosA family fosfomycin resistance glutathione transferase	NF000094.1	FosA family fosfomycin resistance glutathione transferase	CP034436.1	1758608	1759015
GCA_003952325.1	GCA_003952325.1_02662	mexX	multidrug efflux RND transporter periplasmic adaptor subunit MexX	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	396	396	100.00	98.99	396	AAF14522.1	multidrug efflux RND transporter periplasmic adaptor subunit MexX	NA	NA	CP034436.1	2801484	2802674
GCA_003952325.1	GCA_003952325.1_03274	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	414	414	100.00	99.28	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP034436.1	3504720	3505964
GCA_003952325.1	GCA_003952325.1_05068	blaPDC-11	class C beta-lactamase PDC-11	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	397	397	100.00	100.00	397	WP_033990638.1	class C beta-lactamase PDC-11	NF000422.6	PDC family class C beta-lactamase	CP034436.1	5326336	5327529
GCA_003952325.1	GCA_003952325.1_05078	aph(3)-IIb	aminoglycoside O-phosphotransferase APH(3)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	268	268	100.00	100.00	268	WP_003113011.1	aminoglycoside O-phosphotransferase APH(3)-IIb	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP034436.1	5339871	5340677
GCA_003952325.1	GCA_003952325.1_05487	mexA	multidrug efflux RND transporter periplasmic adaptor subunit MexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	383	383	100.00	100.00	383	AAA74436.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	NF033834.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	CP034436.1	5756043	5757194
GCA_003952325.1	GCA_003952325.1_05879	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	49.45	91	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP034436.1	6165580	6165855
GCA_003952325.1	GCA_003952325.1_05886	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP034436.1	6172045	6172884
GCA_003952325.1	GCA_003952325.1_05887	blaVEB-9	inhibitor-resistant extended-spectrum class A beta-lactamase VEB-9	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN/TANIBORBACTAM	ALLELEP	299	299	100.00	100.00	299	WP_032494864.1	inhibitor-resistant extended-spectrum class A beta-lactamase VEB-9	NF000390.2	VEB family extended-spectrum class A beta-lactamase	CP034436.1	6173474	6174373
GCA_003952325.1	GCA_003952325.1_05888	tet(A)	tetracycline efflux MFS transporter Tet(A)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	396	399	98.50	99.49	393	WP_001973670.1	tetracycline efflux MFS transporter Tet(A)	NF012193.0	tetracycline efflux MFS transporter Tet(A)	CP034436.1	6175107	6176297
GCA_003952325.1	GCA_003952325.1_05898	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP034436.1	6182679	6183518
GCA_003952325.1	GCA_003952325.1_05900	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	271	263	100.00	100.00	263	WP_001209508.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	CP034436.1	6185405	6186220
GCA_003952325.1	GCA_003952325.1_05901	blaOXA-677	OXA-10 family class D beta-lactamase OXA-677	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	266	266	100.00	100.00	266	WP_122630859.1	OXA-10 family class D beta-lactamase OXA-677	NF000386.2	OXA-10 family class D beta-lactamase	CP034436.1	6186213	6187013
GCA_003952325.1	GCA_003952325.1_05902	ant(2)-Ia	aminoglycoside nucleotidyltransferase ANT(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	344	177	100.00	100.00	177	WP_000381802.1	aminoglycoside nucleotidyltransferase ANT(2)-Ia	NF000064.3	aminoglycoside nucleotidyltransferase ANT(2)-Ia	CP034436.1	6188218	6189252
GCA_003952325.1	GCA_003952325.1_05925	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	76.92	91	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP034436.1	6205961	6206236
GCA_003952325.1	GCA_003952325.1_05926	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	144	141	97.87	71.74	138	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP034436.1	6206249	6206683
GCA_003952325.1	GCA_003952325.1_05927	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	564	561	100.00	75.22	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP034436.1	6206704	6208398
GCA_003952325.1	GCA_003952325.1_06093	blaOXA-846	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-846	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	262	262	100.00	100.00	262	WP_033989974.1	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-846	NF000432.2	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase	CP034436.1	6393872	6394660
GCA_020640935.1	GCA_020640935.1_00310	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NWMU01000002.1	141517	143175
GCA_020640935.1	GCA_020640935.1_01238	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	96.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	NWMU01000008.1	112942	114141
GCA_030176255.1	GCA_030176255.1_00940	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNTW010000002.1	128240	129094
GCA_003258335.1	GCA_003258335.1_00960	blaOXA-815	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-815	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	273	273	100.00	100.00	273	WP_111280830.1	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-815	NF000266.2	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase	CP030031.1	1054211	1055032
GCA_003258335.1	GCA_003258335.1_01720	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	287	285	97.54	40.85	284	WP_063864745.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	CP030031.1	1835042	1835905
GCA_003258335.1	GCA_003258335.1_01910	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	397	97.98	77.38	389	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP030031.1	2046343	2047530
GCA_001807625.1	GCA_001807625.1_02309	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.51	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	KV789613.1	14166	15545
GCA_000193735.2	GCA_000193735.2_00458	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	AEPF01000113.1	38208	39587
GCA_003461645.1	GCA_003461645.1_00574	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	424	641	66.15	99.06	424	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	QTXM01000010.1	108424	109698
GCA_003461645.1	GCA_003461645.1_02252	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	QTXM01000033.1	14937	15902
GCA_003461645.1	GCA_003461645.1_02946	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	89.85	266	WP_002682030.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	QTXM01000007.1	108287	109087
GCA_006542705.1	GCA_006542705.1_01936	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	296	98.99	42.66	293	WP_005827792.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	AP019737.1	2260115	2261020
GCA_003044675.1	GCA_003044675.1_00255	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.64	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	POXQ01000001.1	255300	256826
GCA_003044675.1	GCA_003044675.1_01101	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	POXQ01000003.1	148435	149814
GCA_003044675.1	GCA_003044675.1_01373	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.66	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	POXQ01000004.1	171387	172625
GCA_001809245.1	GCA_001809245.1_00361	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	KV796591.1	37230	38609
GCA_000211035.2	GCA_000211035.2_00934	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	371	371	100.00	100.00	371	EHE72460.1	multidrug efflux MFS transporter PmrA	NA	NA	FQ312041.2	873596	874711
GCA_002276615.1	GCA_002276615.1_00007	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	69.06	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NDFL01000010.1	9459	9896
GCA_002276615.1	GCA_002276615.1_00320	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	NDFL01000014.1	3565	4857
GCA_002276615.1	GCA_002276615.1_00324	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NDFL01000014.1	8540	8887
GCA_002276615.1	GCA_002276615.1_00401	catA	type A-8 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	215	215	100.00	100.00	215	WP_002352254.1	type A-8 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	NDFL01000019.1	3974	4621
GCA_002276615.1	GCA_002276615.1_00909	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	NDFL01000020.1	2404	2784
GCA_002276615.1	GCA_002276615.1_00910	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	NDFL01000020.1	2774	4531
GCA_002276615.1	GCA_002276615.1_00911	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NDFL01000020.1	4638	5483
GCA_002276615.1	GCA_002276615.1_02437	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	NDFL01000008.1	57630	58703
GCA_002276615.1	GCA_002276615.1_02544	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	NDFL01000009.1	52104	53393
GCA_024205745.1	GCA_024205745.1_00583	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	260	405	64.20	99.62	260	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NA	NA	CP073117.1	573783	574565
GCA_024205745.1	GCA_024205745.1_00584	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP073117.1	574685	576148
GCA_014266505.1	GCA_014266505.1_00273	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMVM010000015.1	15266	16810
GCA_014266505.1	GCA_014266505.1_00274	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMVM010000015.1	16988	17554
GCA_014266505.1	GCA_014266505.1_00276	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JACMVM010000015.1	18853	19752
GCA_014266505.1	GCA_014266505.1_00277	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JACMVM010000015.1	19851	21317
GCA_014266505.1	GCA_014266505.1_00452	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	86.25	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVM010000002.1	79055	80344
GCA_014266505.1	GCA_014266505.1_00646	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMVM010000002.1	281436	282281
GCA_014266505.1	GCA_014266505.1_00647	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMVM010000002.1	282388	284145
GCA_014266505.1	GCA_014266505.1_00648	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMVM010000002.1	284135	284515
GCA_028527885.1	GCA_028527885.1_00690	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JAQPSO010000017.1	388	1191
GCA_028527885.1	GCA_028527885.1_00691	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAQPSO010000017.1	1191	2027
GCA_028527885.1	GCA_028527885.1_00692	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAQPSO010000017.1	2231	3406
GCA_028527885.1	GCA_028527885.1_00821	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQPSO010000002.1	22242	23096
GCA_028527885.1	GCA_028527885.1_01378	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAQPSO010000035.1	94	909
GCA_028527885.1	GCA_028527885.1_02136	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	98.83	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JAQPSO010000009.1	44	1585
GCA_000165575.1	GCA_000165575.1_01126	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	464	464	100.00	100.00	464	ADO96486.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP002276.1	1144674	1146068
GCA_001708445.1	GCA_001708445.1_01516	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	98.52	64.93	134	WP_003082280.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP015637.1	1649122	1649532
GCA_001708445.1	GCA_001708445.1_02488	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	413	100.00	80.96	415	CAK15125.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP015637.1	2743362	2744603
GCA_001708445.1	GCA_001708445.1_03245	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	384	397	95.97	57.74	381	WP_148044448.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP015637.1	3620545	3621699
GCA_006094415.1	GCA_006094415.1_00254	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP035298.1	249964	251388
GCA_962719605.1	GCA_962719605.1_00116	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIYE010000001.1	115542	116921
GCA_962719605.1	GCA_962719605.1_00339	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIYE010000002.1	156050	156955
GCA_962719605.1	GCA_962719605.1_00690	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIYE010000005.1	57107	58633
GCA_962719605.1	GCA_962719605.1_01178	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIYE010000009.1	86043	86675
GCA_962719605.1	GCA_962719605.1_01179	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.15	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIYE010000009.1	86928	88166
GCA_019375695.1	GCA_019375695.1_00363	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCI010000013.1	64197	65162
GCA_019375695.1	GCA_019375695.1_01697	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	98.65	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCI010000003.1	94653	95843
GCA_019375695.1	GCA_019375695.1_02223	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.38	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCI010000006.1	109934	111859
GCA_015679665.1	GCA_015679665.1_00447	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030814.1	457750	459129
GCA_015679665.1	GCA_015679665.1_01183	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP030814.1	1214415	1215320
GCA_015679665.1	GCA_015679665.1_01311	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030814.1	1350531	1351769
GCA_015679665.1	GCA_015679665.1_01313	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	215	210	74.29	98.72	156	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030814.1	1353260	1353907
GCA_015679665.1	GCA_015679665.1_01315	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030814.1	1354718	1356286
GCA_015679665.1	GCA_015679665.1_01512	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030814.1	1566262	1567788
GCA_003408635.1	GCA_003408635.1_01234	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	94.44	144	AAC38229.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP031606.1	1297979	1298413
GCA_003408635.1	GCA_003408635.1_01235	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	AAA98222.1	mercuric transport protein MerT	NA	NA	CP031606.1	1298485	1298835
GCA_003408635.1	GCA_003408635.1_01236	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	98.90	93.33	90	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP031606.1	1298851	1299126
GCA_003408635.1	GCA_003408635.1_01237	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	81	81	100.00	100.00	81	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	CP031606.1	1299129	1299374
GCA_003408635.1	GCA_003408635.1_01238	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	548	561	100.00	85.38	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP031606.1	1299371	1301017
GCA_003408635.1	GCA_003408635.1_01239	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	98.35	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP031606.1	1301034	1301399
GCA_003408635.1	GCA_003408635.1_01240	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP031606.1	1301396	1301632
GCA_003408635.1	GCA_003408635.1_01422	tmexD	multidrug efflux RND transporter permease subunit TMexD	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	1044	1044	100.00	96.36	1044	WP_027591160.1	multidrug efflux RND transporter permease subunit TMexD2	NA	NA	CP031606.1	1478705	1481839
GCA_003408635.1	GCA_003408635.1_01751	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.36	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP031606.1	1801953	1804802
GCA_003408635.1	GCA_003408635.1_02225	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	412	414	98.31	76.17	407	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP031606.1	2276072	2277310
GCA_002312885.1	GCA_002312885.1_01275	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	NIBW01000002.1	11765	12730
GCA_000478055.1	GCA_000478055.1_02394	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515739.1	826	1680
GCA_002096435.1	GCA_002096435.1_01287	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	NCUI01000024.1	359060	359488
GCA_018364115.1	GCA_018364115.1_01341	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAGZMQ010000014.1	25184	25612
GCA_019928745.1	GCA_019928745.1_00327	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHZOM010000001.1	325850	327769
GCA_003425645.1	GCA_003425645.1_01690	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.41	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031682.1	1639642	1641036
GCA_025144805.1	GCA_025144805.1_00805	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXKU010000002.1	179813	181234
GCA_025144805.1	GCA_025144805.1_00806	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	220	212	96.70	45.63	206	CAC86907.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JALXKU010000002.1	181285	181947
GCA_025144805.1	GCA_025144805.1_00910	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JALXKU010000022.1	1070	1924
GCA_017298855.1	GCA_017298855.1_01054	smdA	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	591	591	100.00	98.48	591	BAF79679.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	NA	NA	CP071206.1	1099705	1101480
GCA_017298855.1	GCA_017298855.1_01055	smdB	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	592	592	100.00	98.65	592	BAF79680.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	NA	NA	CP071206.1	1101473	1103251
GCA_017298855.1	GCA_017298855.1_01070	sdeY	multidrug efflux RND transporter permease subunit SdeY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1048	1051	99.43	95.70	1046	BAC77251.1	multidrug efflux RND transporter permease subunit SdeY	NA	NA	CP071206.1	1112541	1115687
GCA_017298855.1	GCA_017298855.1_01956	sdeB	multidrug efflux RND transporter permease subunit SdeB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1047	1047	100.00	99.62	1047	AAO18187.2	multidrug efflux RND transporter permease subunit SdeB	NA	NA	CP071206.1	2018182	2021325
GCA_017298855.1	GCA_017298855.1_01957	sdeA	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	395	395	100.00	99.75	395	AAS55383.1	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	CP071206.1	2021350	2022537
GCA_017298855.1	GCA_017298855.1_02296	blaSRT	SRT/SST family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	378	378	100.00	99.47	378	WP_063864750.1	cephalosporin-hydrolyzing class C beta-lactamase SST-1	NF000423.2	SRT/SST family class C beta-lactamase	CP071206.1	2345851	2346987
GCA_017298855.1	GCA_017298855.1_02529	tet(41)	tetracycline efflux MFS transporter Tet(41)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	388	393	98.73	95.62	388	WP_063855881.1	tetracycline efflux MFS transporter Tet(41)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP071206.1	2615298	2616464
GCA_017298855.1	GCA_017298855.1_02613	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	91	102	90.20	71.58	95	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP071206.1	2705533	2705808
GCA_017298855.1	GCA_017298855.1_02627	ssmE	multidrug efflux SMR transporter SsmE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	106	110	96.36	100.00	106	BAF80121.1	multidrug efflux SMR transporter SsmE	NA	NA	CP071206.1	2720936	2721256
GCA_017298855.1	GCA_017298855.1_02729	smfY	multidrug efflux MFS transporter SmfY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	490	490	100.00	98.37	490	BAE79899.1	multidrug efflux MFS transporter SmfY	NA	NA	CP071206.1	2836722	2838194
GCA_017298855.1	GCA_017298855.1_02876	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	139	98.56	67.15	137	WP_004857515.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP071206.1	2978288	2978695
GCA_017298855.1	GCA_017298855.1_04304	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	146	146	100.00	100.00	146	WP_033639326.1	aminoglycoside 6-N-acetyltransferase	NF000021.4	aminoglycoside 6-N-acetyltransferase	CP071206.1	4464265	4464705
GCA_017298855.1	GCA_017298855.1_04800	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	81.27	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP071206.1	4987057	4987959
GCA_001071965.1	GCA_001071965.1_00196	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JVOH01000023.1	2817	3662
GCA_001071965.1	GCA_001071965.1_00197	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.04	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JVOH01000023.1	3769	5526
GCA_001071965.1	GCA_001071965.1_00198	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JVOH01000023.1	5516	5896
GCA_001071965.1	GCA_001071965.1_00814	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JVOH01000058.1	5879	7168
GCA_001071965.1	GCA_001071965.1_01929	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	267	350	74.29	80.00	260	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JVOH01000096.1	8942	9745
GCA_001071965.1	GCA_001071965.1_02312	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JVOH01000112.1	3154	3501
GCA_001071965.1	GCA_001071965.1_02316	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JVOH01000112.1	7184	8476
GCA_029927385.1	GCA_029927385.1_00003	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREDC010000010.1	2044	2424
GCA_029927385.1	GCA_029927385.1_00004	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREDC010000010.1	2414	4171
GCA_029927385.1	GCA_029927385.1_00005	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREDC010000010.1	4340	5185
GCA_029927385.1	GCA_029927385.1_01094	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREDC010000002.1	19879	20952
GCA_029927385.1	GCA_029927385.1_01206	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDC010000002.1	162840	164129
GCA_029927385.1	GCA_029927385.1_01207	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREDC010000002.1	164147	164548
GCA_029927385.1	GCA_029927385.1_02318	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDC010000007.1	13035	14324
GCA_915066855.1	GCA_915066855.1_01282	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAJZEF010000038.1	12853	14493
GCA_900461225.1	GCA_900461225.1_02508	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	302	97.02	52.70	296	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	UFXL01000001.1	2622127	2623032
GCA_900461225.1	GCA_900461225.1_02832	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	UFXL01000001.1	3000537	3000992
GCA_900461225.1	GCA_900461225.1_02833	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	CAA70196.1	mercuric transport protein MerT	NA	NA	UFXL01000001.1	3001064	3001414
GCA_900461225.1	GCA_900461225.1_02834	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	94.51	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	UFXL01000001.1	3001430	3001705
GCA_900461225.1	GCA_900461225.1_02835	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	135	140	98.57	78.99	138	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	UFXL01000001.1	3001733	3002140
GCA_900461225.1	GCA_900461225.1_02836	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	99.47	89.78	558	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UFXL01000001.1	3002179	3003861
GCA_900461225.1	GCA_900461225.1_02837	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	UFXL01000001.1	3003879	3004244
GCA_900461225.1	GCA_900461225.1_02838	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	93.59	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	UFXL01000001.1	3004241	3004477
GCA_900461225.1	GCA_900461225.1_03092	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	239	275	85.82	65.68	236	WP_117407753.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	UFXL01000001.1	3280254	3280973
GCA_007992675.1	GCA_007992675.1_00286	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	142	150	89.33	55.22	134	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	BKAS01000001.1	306000	306428
GCA_007992675.1	GCA_007992675.1_00719	sal	Sal family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	HMM	543	543	100.00	69.43	543	WP_096809342.1	Sal family ABC-F type ribosomal protection protein	NF000169.2	Sal family ABC-F type ribosomal protection protein	BKAS01000006.1	15902	17533
GCA_007992675.1	GCA_007992675.1_00893	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.54	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BKAS01000007.1	43261	44550
GCA_007992675.1	GCA_007992675.1_01317	fusF	fusidic acid resistance EF-G-binding protein FusF	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	PARTIALP	131	214	60.28	98.45	129	WP_063851267.1	fusidic acid resistance EF-G-binding protein FusF	NA	NA	BKAS01000012.1	42094	42489
GCA_007992675.1	GCA_007992675.1_01326	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	233	281	81.49	56.77	229	WP_000733274.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	BKAS01000012.1	48954	49655
GCA_007992675.1	GCA_007992675.1_02276	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	85.05	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	BKAS01000031.1	15790	16113
GCA_007992675.1	GCA_007992675.1_02345	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	91.84	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BKAS01000033.1	18946	20238
GCA_007992675.1	GCA_007992675.1_02349	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BKAS01000033.1	23921	24268
GCA_007992675.1	GCA_007992675.1_02461	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	98.27	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	BKAS01000038.1	3054	4487
GCA_007992675.1	GCA_007992675.1_02519	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	100.00	76.26	139	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	BKAS01000041.1	8944	9363
GCA_007992675.1	GCA_007992675.1_02573	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	BKAS01000054.1	309	1775
GCA_007992675.1	GCA_007992675.1_02577	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	BKAS01000057.1	1	324
GCA_900683775.1	GCA_900683775.1_02313	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	229	232	99.14	67.39	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	LR215983.1	2331900	2332589
GCA_900683775.1	GCA_900683775.1_03457	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	LR215983.1	3453855	3455774
GCA_030176615.1	GCA_030176615.1_00513	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUY010000019.1	804	1658
GCA_008368695.1	GCA_008368695.1_01110	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	SSOR01000029.1	3624	5405
GCA_008368695.1	GCA_008368695.1_01319	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	SSOR01000032.1	319	1494
GCA_008368695.1	GCA_008368695.1_01321	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	SSOR01000032.1	1698	2534
GCA_008368695.1	GCA_008368695.1_01322	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	SSOR01000032.1	2534	2953
GCA_008368695.1	GCA_008368695.1_01331	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	SSOR01000037.1	94	909
GCA_022346345.1	GCA_022346345.1_00172	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	94.54	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JAKRDA010000012.1	1145	2686
GCA_022346345.1	GCA_022346345.1_01124	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDA010000002.1	667	1521
GCA_022346345.1	GCA_022346345.1_02178	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRDA010000009.1	33977	35401
GCA_022346345.1	GCA_022346345.1_02179	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	216	87.50	46.15	195	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JAKRDA010000009.1	35436	36089
GCA_025144085.1	GCA_025144085.1_00402	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.26	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAMBBU010000011.1	6837	8261
GCA_025144085.1	GCA_025144085.1_00403	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	86.70	45.64	195	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JAMBBU010000011.1	8295	8948
GCA_025144085.1	GCA_025144085.1_00692	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	336	513	65.50	94.64	336	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NA	NA	JAMBBU010000015.1	16372	17382
GCA_025144085.1	GCA_025144085.1_00694	tetB	tetracycline efflux ABC transporter TetAB subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	609	528	55.68	96.94	294	WP_011116970.1	tetracycline efflux ABC transporter TetAB subunit B	NA	NA	JAMBBU010000015.1	17812	19641
GCA_025144085.1	GCA_025144085.1_00994	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAMBBU010000020.1	598	1452
GCA_008619795.1	GCA_008619795.1_00022	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	AP020316.1	20499	20990
GCA_008619795.1	GCA_008619795.1_00026	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	AP020316.1	22488	22838
GCA_008619795.1	GCA_008619795.1_00182	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.36	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	AP020316.1	149619	150554
GCA_008619795.1	GCA_008619795.1_00183	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	AP020316.1	150556	151539
GCA_008619795.1	GCA_008619795.1_00188	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.45	235	ABD31004.1	serine protease SplA	NA	NA	AP020316.1	155666	156373
GCA_008619795.1	GCA_008619795.1_00189	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	AP020316.1	156498	157220
GCA_008619795.1	GCA_008619795.1_00192	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	99.16	238	ABD30999.1	serine protease SplE	NA	NA	AP020316.1	158995	159711
GCA_008619795.1	GCA_008619795.1_00234	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP020316.1	192228	193520
GCA_008619795.1	GCA_008619795.1_01669	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.33	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	AP020316.1	1674426	1675781
GCA_008619795.1	GCA_008619795.1_01860	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	AP020316.1	1899047	1900405
GCA_008619795.1	GCA_008619795.1_01980	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	98.73	1183	BAB96477.1	collagen adhesin Cna	NA	NA	AP020316.1	2029404	2032955
GCA_008619795.1	GCA_008619795.1_02003	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AP020316.1	2054302	2055354
GCA_008619795.1	GCA_008619795.1_02037	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	AP020316.1	2098677	2100206
GCA_008619795.1	GCA_008619795.1_02250	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	AP020316.1	2329071	2330048
GCA_008619795.1	GCA_008619795.1_02251	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	AP020316.1	2330050	2330997
GCA_008619795.1	GCA_008619795.1_02252	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	AP020316.1	2331564	2332529
GCA_008619795.1	GCA_008619795.1_02504	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	PARTIALP	366	480	73.54	99.15	353	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	AP020316.1	2564692	2565792
GCA_008619795.1	GCA_008619795.1_02650	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	AP020316.1	2716522	2716656
GCA_962707545.1	GCA_962707545.1_00141	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIXF010000001.1	134607	135986
GCA_962707545.1	GCA_962707545.1_00347	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIXF010000002.1	136401	137927
GCA_962707545.1	GCA_962707545.1_00587	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIXF010000003.1	186958	187863
GCA_962707545.1	GCA_962707545.1_00814	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	251	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIXF010000005.1	85720	86475
GCA_962707545.1	GCA_962707545.1_00815	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIXF010000005.1	86592	87830
GCA_024969465.1	GCA_024969465.1_00178	spaD	SpaD fimbrial major subunit SpaD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	490	490	100.00	100.00	490	CAE48740.1	SpaD fimbrial major subunit SpaD	NA	NA	CP103901.1	161823	163295
GCA_024969465.1	GCA_024969465.1_00179	srtC	class C sortase SrtC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	CAE48741.1	class C sortase SrtC	NA	NA	CP103901.1	163396	164334
GCA_024969465.1	GCA_024969465.1_00180	spaE	SpaD fimbrial minor subunit SpaE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	270	263	100.00	100.00	263	CAE48742.1	SpaD fimbrial minor subunit SpaE	NA	NA	CP103901.1	164306	165118
GCA_024969465.1	GCA_024969465.1_00181	spaF	SpaD fimbrial tip protein SpaF	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	718	1039	69.10	100.00	718	CAE48743.1	SpaD fimbrial tip protein SpaF	NA	NA	CP103901.1	165124	167280
GCA_024969465.1	GCA_024969465.1_00483	nanH	exo-alpha-sialidase NanH	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	735	721	100.00	100.00	721	ARB89035.1	exo-alpha-sialidase NanH	NA	NA	CP103901.1	475792	477999
GCA_024969465.1	GCA_024969465.1_01910	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_007929940.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP103901.1	1962058	1962909
GCA_024969465.1	GCA_024969465.1_01975	spaC	SpaA fimbrial minor subunit SpaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1872	1872	100.00	99.95	1872	CAE50541.1	SpaA fimbrial minor subunit SpaC	NA	NA	CP103901.1	2022135	2027753
GCA_024969465.1	GCA_024969465.1_01976	spaB	SpaA fimbrial minor subunit SpaB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	205	205	100.00	100.00	205	CAE50542.1	SpaA fimbrial minor subunit SpaB	NA	NA	CP103901.1	2027757	2028374
GCA_024969465.1	GCA_024969465.1_01977	srtA	class C sortase SrtA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	289	289	100.00	100.00	289	CAE50543.1	class C sortase SrtA	NA	NA	CP103901.1	2028364	2029233
GCA_024969465.1	GCA_024969465.1_01978	spaA	SpaA fimbrial major subunit SpaA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	525	525	100.00	100.00	525	CAE50544.1	SpaA fimbrial major subunit SpaA	NA	NA	CP103901.1	2029234	2030811
GCA_024969465.1	GCA_024969465.1_02048	cbpA	type I collagen-binding adhesin CbpA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1910	951	90.22	99.88	858	CAE50621.1	type I collagen-binding adhesin CbpA	NA	NA	CP103901.1	2104207	2109939
GCA_024969465.1	GCA_024969465.1_02181	spaI	SpaH fimbrial minor subunit SpaI	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	269	269	100.00	100.00	269	CAE50750.1	SpaH fimbrial minor subunit SpaI	NA	NA	CP103901.1	2275235	2276044
GCA_024969465.1	GCA_024969465.1_02182	srtE	SpaH fimbrial biogenesis class C sortase SrtE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	335	348	96.26	99.70	335	CAE50751.1	SpaH fimbrial biogenesis class C sortase SrtE	NA	NA	CP103901.1	2276117	2277124
GCA_024969465.1	GCA_024969465.1_02183	srtD	SpaH fimbrial biogenesis class C sortase SrtD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	318	318	100.00	100.00	318	CAE50752.1	SpaH fimbrial biogenesis class C sortase SrtD	NA	NA	CP103901.1	2277147	2278103
GCA_024969465.1	GCA_024969465.1_02184	spaH	SpaH fimbrial major subunit SpaH	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	555	555	100.00	100.00	555	CAE50753.1	SpaH fimbrial major subunit SpaH	NA	NA	CP103901.1	2278293	2279960
GCA_024969465.1	GCA_024969465.1_02185	spaG	SpaH fimbrial tip protein SpaG	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1375	1375	100.00	100.00	1375	CAE50754.1	SpaH fimbrial tip protein SpaG	NA	NA	CP103901.1	2280064	2284191
GCA_902362205.1	GCA_902362205.1_00030	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	321	321	99.07	83.65	318	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CABIWH010000001.1	30058	31023
GCA_024600575.1	GCA_024600575.1_00733	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	411	396	98.48	88.72	390	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP102329.1	774206	775441
GCA_024600575.1	GCA_024600575.1_01119	norM	multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	462	462	99.78	91.97	461	AAG27731.1	multidrug efflux MATE transporter NorM	NA	NA	CP102329.1	1163680	1165068
GCA_024600575.1	GCA_024600575.1_03997	ant(3)	ANT(3)-I family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	HMM	270	262	99.62	62.84	261	WP_071846244.1	ANT(3)-I family aminoglycoside nucleotidyltransferase	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP102330.1	630787	631599
GCA_024600575.1	GCA_024600575.1_04777	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	294	99.32	55.78	294	WP_025370306.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP102330.1	1538384	1539283
GCA_024600575.1	GCA_024600575.1_05296	blaPEN-bcc	PEN family class A beta-lactamase, Bcc-type	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	312	312	100.00	97.44	312	WP_027789588.1	PEN family class A beta-lactamase, Bcc-type	NF000320.3	PEN family class A beta-lactamase, Bcc-type	CP102330.1	2114896	2115834
GCA_024600575.1	GCA_024600575.1_05546	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	84.62	52.07	121	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP102330.1	2412333	2412728
GCA_024600575.1	GCA_024600575.1_06304	blaOXA	OXA-1043 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	297	268	100.00	84.76	269	WP_077021671.1	OXA-1043 family class D beta-lactamase	NF040600.1	OXA-1043 family class D beta-lactamase	CP102330.1	3260516	3261409
GCA_024600575.1	GCA_024600575.1_07394	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	389	408	92.16	57.03	377	WP_322881141.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP102331.1	1056904	1058073
GCA_022069325.1	GCA_022069325.1_00917	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035244.1	882733	883932
GCA_025150565.1	GCA_025150565.1_00485	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	92.92	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	CP102283.1	459372	461111
GCA_025150565.1	GCA_025150565.1_00486	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	97.58	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	CP102283.1	461108	462847
GCA_000257825.1	GCA_000257825.1_00203	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AICS01000023.1	13821	15740
GCA_000257825.1	GCA_000257825.1_00286	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AICS01000033.1	9610	11073
GCA_000257825.1	GCA_000257825.1_00287	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AICS01000033.1	11094	12311
GCA_020091485.1	GCA_020091485.1_00680	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	300	296	100.00	64.19	296	WP_005827792.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP081913.1	739005	739907
GCA_020091485.1	GCA_020091485.1_03213	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP081913.1	3677097	3679022
GCA_026659935.1	GCA_026659935.1_00076	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	75.36	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JANSKP010000012.1	17122	17541
GCA_026659935.1	GCA_026659935.1_00246	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANSKP010000017.1	4517	4864
GCA_026659935.1	GCA_026659935.1_00250	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JANSKP010000017.1	8550	9839
GCA_026659935.1	GCA_026659935.1_01898	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	51.72	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JANSKP010000006.1	276620	277672
GCA_022689495.1	GCA_022689495.1_00966	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXG010000001.1	263282	263701
GCA_022689495.1	GCA_022689495.1_02254	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXG010000007.1	18759	19832
GCA_015260465.1	GCA_015260465.1_01899	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JABZWP010000069.1	3294	5219
GCA_013277315.1	GCA_013277315.1_01243	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	352	399	88.22	98.01	352	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMMS01000047.1	21430	22488
GCA_013277315.1	GCA_013277315.1_01863	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMMS01000071.1	23267	25186
GCA_030227555.1	GCA_030227555.1_01553	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.06	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JASPAB010000028.1	2602	4080
GCA_008633405.1	GCA_008633405.1_00865	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.28	639	WP_011860841.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	BHYU01000002.1	21804	23723
GCA_015262625.1	GCA_015262625.1_00414	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JABZSL010000006.1	78745	79710
GCA_015262625.1	GCA_015262625.1_00991	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZSL010000001.1	142211	143401
GCA_012931705.2	GCA_012931705.2_00262	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	267	268	99.63	62.59	270	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP051860.2	228557	229360
GCA_012931705.2	GCA_012931705.2_00304	mphK	macrolide 2-phosphotransferase MphK	core	AMR	AMR	MACROLIDE	TELITHROMYCIN/TYLOSIN	EXACTP	306	306	100.00	100.00	306	WP_003246254.1	macrolide 2-phosphotransferase MphK	NA	NA	CP051860.2	275846	276766
GCA_012931705.2	GCA_012931705.2_00645	vmlR	ABC-F type ribosomal protection protein VmlR	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOMYCIN/TIAMULIN/VIRGINIAMYCIN M	EXACTP	547	547	100.00	100.00	547	WP_003234144.1	ABC-F type ribosomal protection protein VmlR	NA	NA	CP051860.2	604745	606388
GCA_012931705.2	GCA_012931705.2_02009	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	144	140	100.00	75.00	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP051860.2	1948363	1948797
GCA_012931705.2	GCA_012931705.2_02115	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	309	98.06	66.99	306	WP_011053164.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	CP051860.2	2080233	2081153
GCA_012931705.2	GCA_012931705.2_02725	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP051860.2	2576692	2577486
GCA_012931705.2	GCA_012931705.2_02846	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	139	139	100.00	100.00	139	CAB14519.1	thioredoxin-dependent arsenate reductase	NA	NA	CP051860.2	2679433	2679852
GCA_012931705.2	GCA_012931705.2_02847	acr3	arsenite efflux transporter Acr3	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	346	346	100.00	100.00	346	CAB14520.2	arsenite efflux transporter Acr3	NA	NA	CP051860.2	2679864	2680904
GCA_012931705.2	GCA_012931705.2_02947	aadK	aminoglycoside 6-adenylyltransferase AadK	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	284	284	100.00	100.00	284	WP_003229862.1	aminoglycoside 6-adenylyltransferase AadK	NF000312.1	aminoglycoside 6-adenylyltransferase AadK	CP051860.2	2759793	2760647
GCA_012931705.2	GCA_012931705.2_03754	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP051860.2	3538307	3539683
GCA_012931705.2	GCA_012931705.2_04428	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	173	173	100.00	100.00	173	WP_003242546.1	streptothricin N-acetyltransferase SatA	NA	NA	CP051860.2	4196721	4197242
GCA_012931705.2	GCA_012931705.2_04431	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_003242953.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP051860.2	4199242	4200618
GCA_013368035.1	GCA_013368035.1_01066	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP055150.1	618440	620359
GCA_000090875.1	GCA_000090875.1_00675	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.51	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	GL349411.1	685059	686438
GCA_012913625.1	GCA_012913625.1_01667	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	154	92.86	61.54	143	WP_015860243.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP051772.1	1700215	1700634
GCA_012913625.1	GCA_012913625.1_02171	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	263	266	97.74	57.69	260	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP051772.1	2233782	2234573
GCA_012913625.1	GCA_012913625.1_03468	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	275	269	96.28	53.96	265	WP_338424127.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP051772.1	3556307	3557134
GCA_001813565.1	GCA_001813565.1_01699	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV812895.1	4332	5972
GCA_016889445.1	GCA_016889445.1_00316	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP069514.1	311575	313494
GCA_016889445.1	GCA_016889445.1_00322	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP069514.1	317591	319372
GCA_016889445.1	GCA_016889445.1_00342	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP069514.1	336711	337157
GCA_016889445.1	GCA_016889445.1_00353	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP069514.1	344866	345720
GCA_016889445.1	GCA_016889445.1_00354	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	98.83	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CP069514.1	345983	347524
GCA_016889445.1	GCA_016889445.1_00365	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP069514.1	358454	359269
GCA_016889445.1	GCA_016889445.1_00368	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP069514.1	360954	361373
GCA_016889445.1	GCA_016889445.1_00369	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP069514.1	361373	362209
GCA_016889445.1	GCA_016889445.1_00371	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP069514.1	362413	363588
GCA_016889445.1	GCA_016889445.1_02123	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP069514.1	2188833	2190275
GCA_016889445.1	GCA_016889445.1_02862	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP069515.1	13671	14525
GCA_016889445.1	GCA_016889445.1_02864	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP069515.1	15326	15772
GCA_000503975.1	GCA_000503975.1_01415	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	KI629913.1	15181	17106
GCA_017655885.1	GCA_017655885.1_00147	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.60	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP040422.1	131786	133429
GCA_017655885.1	GCA_017655885.1_00612	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	44.80	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040422.1	593114	593488
GCA_017655885.1	GCA_017655885.1_00773	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	246	244	99.59	87.35	245	WP_011117197.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP040422.1	768076	768816
GCA_025398675.1	GCA_025398675.1_02174	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP104730.1	40775	41557
GCA_025398675.1	GCA_025398675.1_02175	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	152	243	61.32	98.66	149	WP_001072197.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	NA	CP104730.1	41683	42141
GCA_025398675.1	GCA_025398675.1_02328	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	CP104730.1	197558	198052
GCA_025398675.1	GCA_025398675.1_02577	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	CP104730.1	440210	440704
GCA_002780525.1	GCA_002780525.1_00524	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	PDEN01000004.1	78787	80004
GCA_002780525.1	GCA_002780525.1_00525	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	PDEN01000004.1	80025	81488
GCA_002780525.1	GCA_002780525.1_01630	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	PDEN01000021.1	27	1448
GCA_001714745.1	GCA_001714745.1_00033	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP016400.1	37710	39629
GCA_001714745.1	GCA_001714745.1_00034	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	458	458	100.00	99.13	458	WP_002294500.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP016400.1	39823	41199
GCA_001714745.1	GCA_001714745.1_01053	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP016400.1	993759	994496
GCA_001714745.1	GCA_001714745.1_01368	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	412	639	53.83	99.71	344	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NA	NA	CP016400.1	1314729	1315967
GCA_023109275.1	GCA_023109275.1_00616	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	230	399	57.64	90.00	230	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JALDUE010000001.1	602003	602695
GCA_023109275.1	GCA_023109275.1_00751	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDUE010000001.1	740748	741965
GCA_023109275.1	GCA_023109275.1_00752	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDUE010000001.1	742085	743548
GCA_003425465.1	GCA_003425465.1_01581	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031685.1	1575229	1576623
GCA_018588825.1	GCA_018588825.1_00696	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	BLASTP	264	264	100.00	99.62	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAFEVV010000011.1	83116	83910
GCA_014267135.1	GCA_014267135.1_00098	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JACMUR010000020.1	388	711
GCA_014267135.1	GCA_014267135.1_01540	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	95.34	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMUR010000007.1	18055	19347
GCA_014267135.1	GCA_014267135.1_01545	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMUR010000007.1	22182	22562
GCA_014267135.1	GCA_014267135.1_01546	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMUR010000007.1	22552	24309
GCA_014267135.1	GCA_014267135.1_01547	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMUR010000007.1	24416	25261
GCA_014267135.1	GCA_014267135.1_01954	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMUR010000001.1	287607	288899
GCA_022346165.1	GCA_022346165.1_00076	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDE010000010.1	77854	78708
GCA_023148065.1	GCA_023148065.1_00647	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHXOH010000002.1	132283	134202
GCA_014899365.1	GCA_014899365.1_00283	aac(2)-Ic	aminoglycoside N-acetyltransferase AAC(2)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	181	181	100.00	100.00	181	WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	NF000034.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	CP041796.1	314133	314678
GCA_014899365.1	GCA_014899365.1_02087	erm(37)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	150	179	83.80	99.33	150	WP_003900446.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	NA	NA	CP041796.1	2238545	2238997
GCA_014899365.1	GCA_014899365.1_02173	blaC	class A beta-lactamase BlaC	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	307	307	100.00	100.00	307	WP_003410677.1	class A beta-lactamase BlaC	NF041154.1	class A beta-lactamase BlaC	CP041796.1	2337655	2338578
GCA_030176435.1	GCA_030176435.1_02233	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUK010000008.1	84995	85849
GCA_022291085.1	GCA_022291085.1_00595	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAATOG010000001.1	631003	632295
GCA_022291085.1	GCA_022291085.1_02487	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAATOG010000009.1	4783	5577
GCA_022291085.1	GCA_022291085.1_02488	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAATOG010000009.1	5670	6212
GCA_022291085.1	GCA_022291085.1_02489	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAATOG010000009.1	6209	7117
GCA_022291085.1	GCA_022291085.1_02490	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAATOG010000009.1	7422	8159
GCA_022291085.1	GCA_022291085.1_02499	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAATOG010000011.1	1454	1834
GCA_022291085.1	GCA_022291085.1_02500	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAATOG010000011.1	1824	3581
GCA_022291085.1	GCA_022291085.1_02501	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAATOG010000011.1	3688	4533
GCA_022291085.1	GCA_022291085.1_02508	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAATOG010000005.1	400	1839
GCA_022291085.1	GCA_022291085.1_02510	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAATOG010000006.1	497	982
GCA_011714915.1	GCA_011714915.1_01985	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	392	399	87.72	98.57	350	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXV01000006.1	13709	14887
GCA_000463385.1	GCA_000463385.1_00663	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP003858.1	644482	645219
GCA_000463385.1	GCA_000463385.1_00672	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.75	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP003858.1	654011	655930
GCA_019714115.1	GCA_019714115.1_01917	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAIGOC010000005.1	76209	77501
GCA_019714115.1	GCA_019714115.1_02447	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAIGOC010000011.1	10949	12415
GCA_019714115.1	GCA_019714115.1_02509	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAIGOC010000014.1	2647	2961
GCA_019714115.1	GCA_019714115.1_02510	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAIGOC010000014.1	2961	4250
GCA_024792005.1	GCA_024792005.1_01754	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANUUA010000002.1	1437142	1438107
GCA_024792005.1	GCA_024792005.1_02812	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANUUA010000002.1	2389784	2390749
GCA_024792005.1	GCA_024792005.1_02837	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	253	321	77.26	100.00	248	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NA	NA	JANUUA010000002.1	2407359	2408120
GCA_024792005.1	GCA_024792005.1_03636	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANUUA010000002.1	3126163	3127128
GCA_024792005.1	GCA_024792005.1_04148	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.36	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JANUUA010000002.1	3554024	3554983
GCA_024792005.1	GCA_024792005.1_04270	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUUA010000002.1	3655858	3657783
GCA_000020605.1	GCA_000020605.1_00597	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	149	144	100.00	61.11	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP001107.1	587177	587626
GCA_000020605.1	GCA_000020605.1_03330	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	233	233	99.57	78.11	233	WP_003436401.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CP001107.1	3321101	3321802
GCA_000184745.1	GCA_000184745.1_01493	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	290	301	91.03	46.55	275	WP_148281568.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP002417.1	1639108	1639980
GCA_000184745.1	GCA_000184745.1_02440	blaLRA1	LRA1 family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	294	295	99.66	90.14	294	WP_063842263.1	LRA1 family class A beta-lactamase	NF033103.1	class A beta-lactamase	CP002417.1	2615247	2616131
GCA_000184745.1	GCA_000184745.1_03681	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	82.52	56.78	118	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP002417.1	3931098	3931493
GCA_029929545.1	GCA_029929545.1_00284	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREHL010000015.1	10257	10658
GCA_029929545.1	GCA_029929545.1_00285	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHL010000015.1	10676	11965
GCA_029929545.1	GCA_029929545.1_00286	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAREHL010000015.1	11965	12279
GCA_029929545.1	GCA_029929545.1_01215	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHL010000002.1	250959	252251
GCA_024330665.1	GCA_024330665.1_02007	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	99.18	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	JANDXE010000040.1	12784	13518
GCA_024330665.1	GCA_024330665.1_02540	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANDXE010000058.1	92	1057
GCA_003044855.1	GCA_003044855.1_00182	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	POYA01000001.1	177072	178451
GCA_003044855.1	GCA_003044855.1_00602	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	POYA01000001.1	581429	582955
GCA_003044855.1	GCA_003044855.1_01544	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	93.93	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	POYA01000003.1	173421	174659
GCA_003944405.1	GCA_003944405.1_02011	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJMG01000006.1	187095	187523
GCA_012871055.1	GCA_012871055.1_03136	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	305	97.38	53.87	297	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	AP013103.1	3271589	3272488
GCA_012871055.1	GCA_012871055.1_03193	blaBJP	BJP family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	295	294	99.66	84.98	293	WP_011088970.1	BJP family subclass B3 metallo-beta-lactamase	NF012140.0	BJP family subclass B3 metallo-beta-lactamase	AP013103.1	3340027	3340914
GCA_012871055.1	GCA_012871055.1_04682	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	272	99.26	69.26	270	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	AP013103.1	4876047	4876856
GCA_001553915.1	GCA_001553915.1_00588	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.04	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP014233.1	639842	641320
GCA_001307855.1	GCA_001307855.1_01319	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	60.54	261	WP_019396295.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	LGUD01000017.1	84414	85196
GCA_001307855.1	GCA_001307855.1_02281	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	120	100.00	46.34	123	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LGUD01000004.1	117927	118292
GCA_001808255.1	GCA_001808255.1_00197	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV792654.1	151197	152837
GCA_030176075.1	GCA_030176075.1_00955	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUW010000022.1	22035	22889
GCA_015679845.1	GCA_015679845.1_00449	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030820.1	457721	459100
GCA_015679845.1	GCA_015679845.1_01201	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP030820.1	1220963	1221868
GCA_015679845.1	GCA_015679845.1_01330	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030820.1	1357079	1358317
GCA_015679845.1	GCA_015679845.1_01332	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	215	210	74.29	98.72	156	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030820.1	1359808	1360455
GCA_015679845.1	GCA_015679845.1_01334	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030820.1	1361266	1362834
GCA_015679845.1	GCA_015679845.1_01526	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030820.1	1564935	1566461
GCA_028328105.1	GCA_028328105.1_00544	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMNH010000020.1	25023	26942
GCA_028328105.1	GCA_028328105.1_01165	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.06	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAQMNH010000039.1	17022	18500
GCA_028328105.1	GCA_028328105.1_01730	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	152	243	56.38	98.54	137	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	NA	JAQMNH010000006.1	70370	70828
GCA_001813925.1	GCA_001813925.1_01801	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV814412.1	67127	67981
GCA_001813925.1	GCA_001813925.1_02293	srtC	class C sortase SrtC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	94.23	312	CAE48741.1	class C sortase SrtC	NA	NA	KV814416.1	190661	191599
GCA_001813925.1	GCA_001813925.1_02295	srtB	class B sortase SrtB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	329	329	100.00	93.92	329	CAE48738.1	class B sortase SrtB	NA	NA	KV814416.1	193849	194838
GCA_001813925.1	GCA_001813925.1_02360	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV814418.1	839	2263
GCA_951230405.1	GCA_951230405.1_01654	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CATNVM010000057.1	4360	5550
GCA_000738245.1	GCA_000738245.1_00009	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JFCK01000006.1	2118	3899
GCA_000738245.1	GCA_000738245.1_00242	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JFCK01000157.1	2242	3663
GCA_000738245.1	GCA_000738245.1_01754	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.18	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCK01000248.1	28264	29118
GCA_000159535.2	GCA_000159535.2_00176	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP002110.1	168865	170220
GCA_000159535.2	GCA_000159535.2_00376	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP002110.1	397792	399150
GCA_000159535.2	GCA_000159535.2_00448	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP002110.1	477651	478637
GCA_000159535.2	GCA_000159535.2_00449	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP002110.1	478737	480743
GCA_000159535.2	GCA_000159535.2_00532	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP002110.1	567061	568113
GCA_000159535.2	GCA_000159535.2_00567	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP002110.1	611674	613203
GCA_000159535.2	GCA_000159535.2_00781	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP002110.1	841938	842915
GCA_000159535.2	GCA_000159535.2_00782	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP002110.1	842917	843864
GCA_000159535.2	GCA_000159535.2_00783	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP002110.1	844414	845379
GCA_000159535.2	GCA_000159535.2_00877	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP002110.1	937719	938138
GCA_000159535.2	GCA_000159535.2_01046	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	96.67	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP002110.1	1084707	1086149
GCA_000159535.2	GCA_000159535.2_01199	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP002110.1	1239562	1239696
GCA_000159535.2	GCA_000159535.2_01229	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP002110.1	1269807	1270298
GCA_000159535.2	GCA_000159535.2_01234	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP002110.1	1272511	1272861
GCA_000159535.2	GCA_000159535.2_01392	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.65	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP002110.1	1399104	1399823
GCA_000159535.2	GCA_000159535.2_01393	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP002110.1	1399858	1400586
GCA_000159535.2	GCA_000159535.2_01394	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP002110.1	1400740	1401525
GCA_000159535.2	GCA_000159535.2_01395	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP002110.1	1401564	1402319
GCA_000159535.2	GCA_000159535.2_01407	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	96.22	238	ABD30999.1	serine protease SplE	NA	NA	CP002110.1	1411301	1412017
GCA_000159535.2	GCA_000159535.2_01457	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP002110.1	1450878	1452170
GCA_000159535.2	GCA_000159535.2_01804	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP002110.1	1791519	1792457
GCA_000159535.2	GCA_000159535.2_01805	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP002110.1	1792459	1793436
GCA_000159535.2	GCA_000159535.2_02791	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	99.51	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP002111.1	4972	5589
GCA_000159535.2	GCA_000159535.2_02804	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP002111.1	15096	15941
GCA_000159535.2	GCA_000159535.2_02805	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP002111.1	16048	17805
GCA_000159535.2	GCA_000159535.2_02806	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP002111.1	17795	18175
GCA_001809065.1	GCA_001809065.1_00919	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.49	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV795647.1	3531	5312
GCA_001809065.1	GCA_001809065.1_02052	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV795675.1	68696	69550
GCA_022136825.1	GCA_022136825.1_01467	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAKNFA010000004.1	216788	218005
GCA_022136825.1	GCA_022136825.1_01468	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAKNFA010000004.1	218125	219588
GCA_014898195.1	GCA_014898195.1_01087	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	137	121	100.00	43.31	127	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP062939.1	1242252	1242665
GCA_001059185.1	GCA_001059185.1_00501	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.12	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JURC01000019.1	1876	3270
GCA_001059185.1	GCA_001059185.1_01012	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JURC01000040.1	90614	92254
GCA_001697105.1	GCA_001697105.1_00327	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.62	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP012391.1	333314	334840
GCA_001697105.1	GCA_001697105.1_00840	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP012391.1	850215	851594
GCA_001697105.1	GCA_001697105.1_01071	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP012391.1	1096960	1098528
GCA_001697105.1	GCA_001697105.1_01073	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP012391.1	1099165	1099797
GCA_001697105.1	GCA_001697105.1_01074	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.54	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP012391.1	1100201	1101439
GCA_900445205.1	GCA_900445205.1_00254	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	98.26	57.09	282	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	UFSN01000003.1	250319	251182
GCA_900445205.1	GCA_900445205.1_00848	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	110	123	82.11	49.50	101	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UFSN01000003.1	866678	867010
GCA_023448035.1	GCA_023448035.1_00943	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	249	93.57	46.61	236	WP_193683783.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	JAEXMQ010000035.1	17165	17941
GCA_023148425.1	GCA_023148425.1_01752	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHXNU010000002.1	287414	288706
GCA_027683955.1	GCA_027683955.1_00112	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAQCWT010000001.1	124105	125064
GCA_027683955.1	GCA_027683955.1_00710	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAQCWT010000012.1	126778	128703
GCA_027683955.1	GCA_027683955.1_02145	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	361	321	98.44	71.20	316	WP_004348227.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAQCWT010000003.1	192638	193723
GCA_027683955.1	GCA_027683955.1_02255	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.00	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JAQCWT010000033.1	12057	13262
GCA_027683955.1	GCA_027683955.1_02256	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JAQCWT010000033.1	13287	13799
GCA_027683955.1	GCA_027683955.1_02927	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAQCWT010000007.1	717	1517
GCA_019048025.1	GCA_019048025.1_00817	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP077270.1	817056	818345
GCA_019048025.1	GCA_019048025.1_00916	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP077270.1	924619	925911
GCA_019048025.1	GCA_019048025.1_02463	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	PARTIALP	88	122	72.13	96.59	88	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP077271.1	5697	5963
GCA_000775415.1	GCA_000775415.1_00650	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	KN323183.1	719355	719774
GCA_000775415.1	GCA_000775415.1_00651	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	KN323183.1	719774	720610
GCA_000775415.1	GCA_000775415.1_00653	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	KN323183.1	720814	721989
GCA_000775415.1	GCA_000775415.1_01269	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KN323183.1	1405937	1406791
GCA_000775415.1	GCA_000775415.1_02305	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	KN323199.1	224	1075
GCA_000775415.1	GCA_000775415.1_02309	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	KN323202.1	90	905
GCA_001810775.1	GCA_001810775.1_01046	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV802668.1	4205	5863
GCA_015327065.1	GCA_015327065.1_01891	helR	RNA polymerase recycling motor ATPase HelR	plus	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	776	722	97.51	65.45	741	CCA59315.1	RNA polymerase recycling motor ATPase HelR	NF041254.1	RNA polymerase recycling motor ATPase HelR	CP017660.1	2035838	2038168
GCA_015327065.1	GCA_015327065.1_02268	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	394	391	99.74	64.03	392	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	CP017660.1	2448162	2449346
GCA_015327065.1	GCA_015327065.1_02727	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	136	150	84.00	51.16	129	WP_063857695.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP017660.1	3022128	3022538
GCA_027671105.1	GCA_027671105.1_01560	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQEAY010000004.1	114377	115114
GCA_027671105.1	GCA_027671105.1_01571	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQEAY010000004.1	125029	126948
GCA_022691405.1	GCA_022691405.1_00035	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP092565.1	39209	41215
GCA_022691405.1	GCA_022691405.1_00036	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP092565.1	41315	42301
GCA_022691405.1	GCA_022691405.1_00111	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP092565.1	124609	125967
GCA_022691405.1	GCA_022691405.1_00310	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP092565.1	353400	354755
GCA_022691405.1	GCA_022691405.1_00348	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP092565.1	388064	388675
GCA_022691405.1	GCA_022691405.1_01716	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092565.1	1812499	1813791
GCA_022691405.1	GCA_022691405.1_01755	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	CP092565.1	1844924	1845646
GCA_022691405.1	GCA_022691405.1_01756	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP092565.1	1845771	1846478
GCA_022691405.1	GCA_022691405.1_01761	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP092565.1	1850609	1851592
GCA_022691405.1	GCA_022691405.1_01762	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP092565.1	1851594	1852529
GCA_022691405.1	GCA_022691405.1_01770	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP092565.1	1858731	1859486
GCA_022691405.1	GCA_022691405.1_01771	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP092565.1	1859525	1859920
GCA_022691405.1	GCA_022691405.1_01773	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP092565.1	1860450	1861178
GCA_022691405.1	GCA_022691405.1_01774	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP092565.1	1861213	1861932
GCA_022691405.1	GCA_022691405.1_01775	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP092565.1	1862213	1862977
GCA_022691405.1	GCA_022691405.1_02036	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP092565.1	2060481	2060615
GCA_022691405.1	GCA_022691405.1_02183	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	98.96	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP092565.1	2213607	2215049
GCA_022691405.1	GCA_022691405.1_02355	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP092565.1	2365514	2365933
GCA_022691405.1	GCA_022691405.1_02440	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP092565.1	2454326	2455291
GCA_022691405.1	GCA_022691405.1_02441	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP092565.1	2455858	2456805
GCA_022691405.1	GCA_022691405.1_02442	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP092565.1	2456807	2457784
GCA_022691405.1	GCA_022691405.1_02618	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP092565.1	2639894	2640688
GCA_022691405.1	GCA_022691405.1_02619	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	176	180	100.00	97.78	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP092565.1	2640781	2641311
GCA_022691405.1	GCA_022691405.1_02633	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP092565.1	2652104	2653570
GCA_022691405.1	GCA_022691405.1_02634	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	BLASTP	299	299	100.00	99.67	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP092565.1	2653669	2654568
GCA_022691405.1	GCA_022691405.1_02636	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	97.54	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP092565.1	2655933	2656301
GCA_022691405.1	GCA_022691405.1_02644	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	176	180	100.00	97.78	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP092565.1	2662904	2663434
GCA_022691405.1	GCA_022691405.1_02645	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP092565.1	2663527	2664321
GCA_022691405.1	GCA_022691405.1_02709	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP092565.1	2732512	2734041
GCA_022691405.1	GCA_022691405.1_02743	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP092565.1	2777275	2778327
GCA_022691405.1	GCA_022691405.1_02795	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP092566.1	4269	4886
GCA_022691405.1	GCA_022691405.1_02800	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733287.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP092566.1	7713	8558
GCA_022691405.1	GCA_022691405.1_02801	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP092566.1	8665	10422
GCA_022691405.1	GCA_022691405.1_02802	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP092566.1	10412	10792
GCA_022691405.1	GCA_022691405.1_02806	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP092566.1	13875	14189
GCA_022691405.1	GCA_022691405.1_02807	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.77	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092566.1	14189	15478
GCA_022691405.1	GCA_022691405.1_02808	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP092566.1	15496	15891
GCA_003492155.1	GCA_003492155.1_00867	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQMU01000002.1	75347	76252
GCA_003492155.1	GCA_003492155.1_01877	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQMU01000008.1	78722	79960
GCA_003492155.1	GCA_003492155.1_01878	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	96.67	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQMU01000008.1	79977	80840
GCA_003492155.1	GCA_003492155.1_02012	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.24	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQMU01000011.1	14613	16139
GCA_001838135.1	GCA_001838135.1_00427	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV835825.1	32660	34579
GCA_001838135.1	GCA_001838135.1_00699	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV835825.1	312227	313867
GCA_022347335.1	GCA_022347335.1_00072	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDV010000010.1	68313	69167
GCA_022347335.1	GCA_022347335.1_01773	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAKRDV010000053.1	88	903
GCA_000145595.1	GCA_000145595.1_00036	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP002120.1	40346	40750
GCA_000145595.1	GCA_000145595.1_00037	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP002120.1	40967	41710
GCA_000145595.1	GCA_000145595.1_00042	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP002120.1	45140	47146
GCA_000145595.1	GCA_000145595.1_00043	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP002120.1	47246	49003
GCA_000145595.1	GCA_000145595.1_00044	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369216.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP002120.1	49003	49374
GCA_000145595.1	GCA_000145595.1_00119	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100289.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP002120.1	130535	131893
GCA_000145595.1	GCA_000145595.1_00315	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP002120.1	358188	359543
GCA_000145595.1	GCA_000145595.1_00375	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP002120.1	407481	408092
GCA_000145595.1	GCA_000145595.1_00402	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP002120.1	430695	432614
GCA_000145595.1	GCA_000145595.1_00868	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP002120.1	896741	897523
GCA_000145595.1	GCA_000145595.1_00869	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072197.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP002120.1	897649	898380
GCA_000145595.1	GCA_000145595.1_00880	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.17	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP002120.1	905746	906474
GCA_000145595.1	GCA_000145595.1_00881	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	242	242	100.00	100.00	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP002120.1	906498	907226
GCA_000145595.1	GCA_000145595.1_01627	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.40	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP002120.1	1680168	1680920
GCA_000145595.1	GCA_000145595.1_01680	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072197.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP002120.1	1733079	1733810
GCA_000145595.1	GCA_000145595.1_01681	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP002120.1	1733936	1734718
GCA_000145595.1	GCA_000145595.1_01807	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP002120.1	1881863	1883155
GCA_000145595.1	GCA_000145595.1_02063	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP002120.1	2079160	2079651
GCA_000145595.1	GCA_000145595.1_02067	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP002120.1	2081149	2081499
GCA_000145595.1	GCA_000145595.1_02081	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP002120.1	2093303	2093788
GCA_000145595.1	GCA_000145595.1_02103	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP002120.1	2111743	2113182
GCA_000145595.1	GCA_000145595.1_02105	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP002120.1	2114698	2116242
GCA_000145595.1	GCA_000145595.1_02106	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP002120.1	2116426	2116986
GCA_000145595.1	GCA_000145595.1_02113	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP002120.1	2120305	2121078
GCA_000145595.1	GCA_000145595.1_02185	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP002120.1	2176897	2177031
GCA_000145595.1	GCA_000145595.1_02358	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP002120.1	2331438	2332880
GCA_000145595.1	GCA_000145595.1_02533	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP002120.1	2484688	2485107
GCA_000145595.1	GCA_000145595.1_02622	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP002120.1	2575620	2576585
GCA_000145595.1	GCA_000145595.1_02623	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP002120.1	2577153	2578100
GCA_000145595.1	GCA_000145595.1_02624	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP002120.1	2578102	2579079
GCA_000145595.1	GCA_000145595.1_02697	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	910	1115	81.61	99.56	910	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP002120.1	2653169	2655901
GCA_000145595.1	GCA_000145595.1_02796	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP002120.1	2759207	2759587
GCA_000145595.1	GCA_000145595.1_02797	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP002120.1	2759577	2761334
GCA_000145595.1	GCA_000145595.1_02798	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP002120.1	2761441	2762286
GCA_000145595.1	GCA_000145595.1_02866	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP002120.1	2832841	2834370
GCA_000145595.1	GCA_000145595.1_02901	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	354	350	100.00	98.02	354	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP002120.1	2876699	2877763
GCA_013364435.1	GCA_013364435.1_02181	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP054883.1	2109019	2111025
GCA_013364435.1	GCA_013364435.1_02182	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP054883.1	2111125	2112882
GCA_013364435.1	GCA_013364435.1_02183	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP054883.1	2112882	2113253
GCA_013364435.1	GCA_013364435.1_02207	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP054883.1	2130306	2131595
GCA_013364435.1	GCA_013364435.1_02210	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP054883.1	2133763	2134110
GCA_013364435.1	GCA_013364435.1_02373	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP054881.1	5019	6563
GCA_013364435.1	GCA_013364435.1_02374	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP054881.1	6747	7307
GCA_013364435.1	GCA_013364435.1_02376	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP054881.1	8606	9505
GCA_013364435.1	GCA_013364435.1_02377	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.59	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP054881.1	9604	11070
GCA_023452175.1	GCA_023452175.1_00743	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	249	93.57	46.61	236	WP_193683783.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	JAEXWG010000093.1	13342	14118
GCA_022069505.1	GCA_022069505.1_01203	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035247.1	1160785	1161984
GCA_003625805.1	GCA_003625805.1_01488	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHY01000005.1	112119	113060
GCA_000286355.1	GCA_000286355.1_00388	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	253	270	90.74	52.24	245	WP_311033295.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	AJXN01000009.1	6387	7148
GCA_900445995.1	GCA_900445995.1_01477	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	146	144	88.89	48.84	129	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	UIGE01000001.1	1473527	1473967
GCA_900445995.1	GCA_900445995.1_01486	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	476	561	82.17	46.57	466	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UIGE01000001.1	1482740	1484170
GCA_900445995.1	GCA_900445995.1_02320	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	302	98.68	42.62	305	WP_105777201.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	UIGE01000001.1	2323430	2324314
GCA_900445995.1	GCA_900445995.1_02353	catB	type B chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	213	210	97.62	72.68	205	WP_031281281.1	type B chloramphenicol O-acetyltransferase	NF000490.1	type B chloramphenicol O-acetyltransferase	UIGE01000001.1	2357353	2357994
GCA_900445995.1	GCA_900445995.1_02608	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	146	144	88.89	51.16	129	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	UIGE01000001.1	2620688	2621128
GCA_008633045.1	GCA_008633045.1_00752	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	BHYP01000001.1	757953	758690
GCA_008633045.1	GCA_008633045.1_00753	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	BHYP01000001.1	759615	761534
GCA_002356175.1	GCA_002356175.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	AP014956.1	39427	39831
GCA_002356175.1	GCA_002356175.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	AP014956.1	40048	40791
GCA_002356175.1	GCA_002356175.1_00041	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	AP014956.1	44220	46226
GCA_002356175.1	GCA_002356175.1_00042	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	AP014956.1	46326	48083
GCA_002356175.1	GCA_002356175.1_00043	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	AP014956.1	48083	48454
GCA_002356175.1	GCA_002356175.1_00052	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	AP014956.1	55166	55897
GCA_002356175.1	GCA_002356175.1_00053	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	AP014956.1	56023	56805
GCA_002356175.1	GCA_002356175.1_00123	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AP014956.1	133201	133623
GCA_002356175.1	GCA_002356175.1_00164	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	77.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AP014956.1	187026	188099
GCA_002356175.1	GCA_002356175.1_00885	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP014956.1	910465	911754
GCA_002356175.1	GCA_002356175.1_01150	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	AP014956.1	1165560	1166342
GCA_002356175.1	GCA_002356175.1_01151	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	AP014956.1	1166468	1167199
GCA_002356175.1	GCA_002356175.1_01974	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AP014956.1	2003882	2005801
GCA_000832565.1	GCA_000832565.1_00434	sph	sphingomyelinase C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	333	338	98.52	99.70	333	AAP24691.1	sphingomyelinase C	NA	NA	CP009464.1	398732	399733
GCA_000832565.1	GCA_000832565.1_00435	cerA	phospholipase CerA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	283	100.00	98.59	283	AAS39677.1	phospholipase CerA	NA	NA	CP009464.1	399807	400658
GCA_000832565.1	GCA_000832565.1_00440	inhA2	M6 family metalloprotease immune inhibitor InhA2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	799	799	100.00	100.00	799	AAP24685.1	M6 family metalloprotease immune inhibitor InhA2	NA	NA	CP009464.1	404523	406922
GCA_000832565.1	GCA_000832565.1_01338	plcR	transcriptional regulator PlcR	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	213	285	74.74	98.12	213	AAT61178.1	transcriptional regulator PlcR	NA	NA	CP009464.1	1242195	1242836
GCA_000832565.1	GCA_000832565.1_02810	fosB2	fosfomycin resistance bacillithiol transferase FosB2	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_000938987.1	fosfomycin resistance bacillithiol transferase FosB2	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP009464.1	2546600	2547019
GCA_000832565.1	GCA_000832565.1_03028	plcA	phosphatidylinositol diacylglycerol-lyase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	329	329	100.00	100.00	329	AAP27624.1	phosphatidylinositol diacylglycerol-lyase	NA	NA	CP009464.1	2766595	2767584
GCA_000832565.1	GCA_000832565.1_03395	bla2	BcII family subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	EXACTP	256	256	100.00	100.00	256	WP_000799223.1	BcII family subclass B1 metallo-beta-lactamase	NF033095.1	BcII family subclass B1 metallo-beta-lactamase	CP009464.1	3107645	3108415
GCA_000832565.1	GCA_000832565.1_03537	alo	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	512	512	100.00	100.00	512	AAP27127.1	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	NA	NA	CP009464.1	3237413	3238951
GCA_000832565.1	GCA_000832565.1_03690	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	184	184	100.00	100.00	184	WP_000054744.1	streptothricin N-acetyltransferase SatA	NA	NA	CP009464.1	3391358	3391912
GCA_000832565.1	GCA_000832565.1_04222	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	210	210	98.10	66.67	207	WP_071218948.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP009464.1	3877220	3877852
GCA_000832565.1	GCA_000832565.1_04323	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	82.52	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP009464.1	3969205	3970683
GCA_000832565.1	GCA_000832565.1_04324	hlyIIR	hemolysin II regulator HlyIIR	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	201	201	100.00	99.50	201	AAO74585.1	hemolysin II regulator HlyIIR	NA	NA	CP009464.1	3970825	3971430
GCA_000832565.1	GCA_000832565.1_04325	hlyII	hemolysin II HlyII	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	240	412	58.25	96.25	240	AAP10457.1	hemolysin II HlyII	NA	NA	CP009464.1	3971961	3972683
GCA_000832565.1	GCA_000832565.1_04350	bla	class A beta-lactamase Bla1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	306	309	99.03	99.67	306	WP_011053164.1	class A beta-lactamase Bla1	NF033096.1	class A beta-lactamase Bla1	CP009464.1	3996266	3997186
GCA_000832565.1	GCA_000832565.1_04439	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	219	98.63	57.87	216	WP_087344902.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP009464.1	4078192	4078842
GCA_000832565.1	GCA_000832565.1_04796	fosB	FosBx1 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	138	100.00	89.13	138	WP_000943772.1	FosBx1 family fosfomycin resistance bacillithiol transferase	NF041541.1	FosBx1 family fosfomycin resistance bacillithiol transferase	CP009464.1	4408843	4409259
GCA_000832565.1	GCA_000832565.1_04885	entFM	enterotoxin EntFM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	420	421	100.00	98.81	421	AFH83235.1	enterotoxin EntFM	NF040678.1	enterotoxin EntFM	CP009464.1	4486333	4487595
GCA_000832565.1	GCA_000832565.1_04948	nheB	non-hemolytic enterotoxin NHE subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	402	402	100.00	98.51	402	AAS40893.1	non-hemolytic enterotoxin NHE subunit B	NA	NA	CP009464.1	4552587	4553795
GCA_000832565.1	GCA_000832565.1_04949	nheA	non-hemolytic enterotoxin NHE subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	386	386	100.00	97.93	386	AAS40892.1	non-hemolytic enterotoxin NHE subunit A	NA	NA	CP009464.1	4553827	4554987
GCA_000832565.1	GCA_000832565.1_05250	mphL	macrolide 2-phosphotransferase MphL	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	298	303	98.02	87.21	297	WP_002047670.1	macrolide 2-phosphotransferase MphL	NF038057.1	macrolide 2-phosphotransferase MphL	CP009464.1	4829612	4830508
GCA_000832565.1	GCA_000832565.1_05551	inhA1	M6 family metalloprotease immune inhibitor InhA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	795	796	100.00	96.61	796	ADH05944.1	M6 family metalloprotease immune inhibitor InhA1	NA	NA	CP009464.1	5083079	5085466
GCA_000832565.1	GCA_000832565.1_05808	lef	anthrax toxin lethal factor	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	809	809	100.00	100.00	809	AAM26117.1	anthrax toxin lethal factor	NA	NA	CP009463.1	91221	93650
GCA_000832565.1	GCA_000832565.1_05813	pagA	anthrax toxin protective antigen	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	764	764	100.00	99.74	764	AAD32414.1	anthrax toxin protective antigen	NA	NA	CP009463.1	96943	99237
GCA_000832565.1	GCA_000832565.1_05823	atxA	anthrax toxin expression trans-acting transcriptional regulator AtxA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	475	475	100.00	100.00	475	AAD32423.1	anthrax toxin expression trans-acting transcriptional regulator AtxA	NA	NA	CP009463.1	113818	115245
GCA_000832565.1	GCA_000832565.1_05828	cya	anthrax toxin edema factor	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	800	800	100.00	99.88	800	AJG68144.1	anthrax toxin edema factor	NA	NA	CP009463.1	118000	120402
GCA_000832565.1	GCA_000832565.1_05840	hasA	hyaluronan synthase HasA	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	366	427	85.71	99.73	366	KHA45933.1	hyaluronan synthase HasA	NA	NA	CP009463.1	130486	131586
GCA_000832565.1	GCA_000832565.1_05976	capE	capsule biosynthesis protein CapE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	47	47	100.00	100.00	47	AAF13659.1	capsule biosynthesis protein CapE	NA	NA	CP009462.1	79740	79883
GCA_000832565.1	GCA_000832565.1_05977	capD	capsule biosynthesis gamma-glutamyltransferase CapD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	528	528	100.00	100.00	528	AAM26219.1	capsule biosynthesis gamma-glutamyltransferase CapD	NA	NA	CP009462.1	79898	81484
GCA_000832565.1	GCA_000832565.1_05978	capA	capsular polyglutamate synthetase CapA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	411	411	100.00	100.00	411	AAM26220.1	capsular polyglutamate synthetase CapA	NA	NA	CP009462.1	81481	82716
GCA_000832565.1	GCA_000832565.1_05979	capC	capsular polyglutamate amide ligase/translocase CapC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	149	149	100.00	100.00	149	AAM26221.1	capsular polyglutamate amide ligase/translocase CapC	NA	NA	CP009462.1	82728	83177
GCA_000832565.1	GCA_000832565.1_05980	capB	capsule biosynthesis protein CapB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	464	464	100.00	100.00	464	AAF13663.1	capsule biosynthesis protein CapB	NA	NA	CP009462.1	83192	84586
GCA_016127615.1	GCA_016127615.1_00234	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	98.99	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP066023.1	223650	225431
GCA_016127615.1	GCA_016127615.1_00392	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.24	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP066023.1	392577	393431
GCA_016127615.1	GCA_016127615.1_00796	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP066023.1	872282	873457
GCA_016127615.1	GCA_016127615.1_01500	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP066023.1	1627755	1628930
GCA_016127615.1	GCA_016127615.1_01502	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP066023.1	1629134	1629970
GCA_016127615.1	GCA_016127615.1_01503	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP066023.1	1629970	1630773
GCA_016127615.1	GCA_016127615.1_01506	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP066023.1	1632074	1632889
GCA_016127615.1	GCA_016127615.1_02459	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP066023.1	2706304	2706750
GCA_016127615.1	GCA_016127615.1_02542	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP066023.1	2788575	2789999
GCA_000146675.1	GCA_000146675.1_00522	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	GL397214.1	592503	594428
GCA_000146675.1	GCA_000146675.1_00532	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	GL397214.1	603742	604707
GCA_030545615.1	GCA_030545615.1_00740	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAUOMJ010000001.1	76336	77553
GCA_030545615.1	GCA_030545615.1_00741	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAUOMJ010000001.1	77673	79136
GCA_030545615.1	GCA_030545615.1_01401	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.84	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAUOMJ010000003.1	51239	52975
GCA_030545615.1	GCA_030545615.1_01402	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.74	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAUOMJ010000003.1	52977	54701
GCA_030233945.1	GCA_030233945.1_00178	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JASPDH010000001.1	18016	18444
GCA_013276415.1	GCA_013276415.1_00604	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMKZ01000022.1	18871	20292
GCA_027947475.1	GCA_027947475.1_01082	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.63	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP116231.1	1141462	1142940
GCA_000743465.1	GCA_000743465.1_00238	inlL	class 1 internalin InlL	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	626	626	100.00	100.00	626	CDG45949.1	class 1 internalin InlL	NA	NA	KN050647.1	235142	237022
GCA_000743465.1	GCA_000743465.1_00657	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	383	388	98.71	99.74	383	AEO26812.1	class 3 internalin InlP	NA	NA	KN050647.1	633045	634196
GCA_000743465.1	GCA_000743465.1_00747	ami	autolysin Ami	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	917	917	100.00	99.56	917	ASH48222.1	autolysin Ami	NA	NA	KN050647.1	723929	726682
GCA_000743465.1	GCA_000743465.1_01351	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	133	133	100.00	95.49	133	WP_010989789.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	KN050647.1	1289584	1289985
GCA_000743465.1	GCA_000743465.1_01439	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	100.00	296	AHJ03495.1	class 3 internalin InlC	NA	NA	KN050647.1	1382343	1383236
GCA_000743465.1	GCA_000743465.1_01891	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	598	598	100.00	99.33	598	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK	KN050647.1	1818395	1820191
GCA_000743465.1	GCA_000743465.1_02100	aut	peptidoglycan hydrolase Auto	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	572	572	100.00	100.00	572	ADB67911.1	peptidoglycan hydrolase Auto	NA	NA	KN050647.1	2005300	2007018
GCA_000743465.1	GCA_000743465.1_02261	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	98.28	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein	KN050647.1	2155464	2157035
GCA_000743465.1	GCA_000743465.1_02587	inl-lmo0610	lmo0610 family class 1 internalin Inl-lmo0610	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	589	589	100.00	99.15	589	AEO24908.1	lmo0610 family class 1 internalin Inl-lmo0610	NA	NA	KN050647.1	2461574	2463343
GCA_000743465.1	GCA_000743465.1_02689	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	611	605	100.00	98.36	611	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA	KN050647.1	2565354	2567189
GCA_000743465.1	GCA_000743465.1_02752	gadD1	glutamate decarboxylase GadD1	plus	STRESS	ACID	NA	NA	BLASTP	462	462	100.00	99.78	462	CAC98526.1	glutamate decarboxylase GadD1	NA	NA	KN050647.1	2621383	2622771
GCA_000743465.1	GCA_000743465.1_02761	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	95.12	205	AEO24735.1	nuclear targeted protein LntA	NA	NA	KN050647.1	2634403	2635020
GCA_000743465.1	GCA_000743465.1_02764	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	99.21	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA	KN050647.1	2636691	2638583
GCA_000743465.1	GCA_000743465.1_02765	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	36.67	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA	KN050647.1	2638668	2641070
GCA_000743465.1	GCA_000743465.1_02789	inlF	class 1 internalin InlF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	821	821	100.00	99.51	821	AEO24707.1	class 1 internalin InlF	NA	NA	KN050647.1	2663519	2665984
GCA_000743465.1	GCA_000743465.1_02868	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1778	1778	100.00	99.66	1778	AEO24631.1	class 1 internalin InlI	NA	NA	KN050647.1	2729594	2734930
GCA_000743465.1	GCA_000743465.1_02944	inlE	class 1 internalin InlE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	499	499	100.00	99.40	499	CAA07458.1	class 1 internalin InlE	NA	NA	KN050647.1	2813399	2814898
GCA_000743465.1	GCA_000743465.1_02945	inlD	class 1 internalin InlD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	567	567	100.00	100.00	567	AAB67970.1	class 1 internalin InlD	NA	NA	KN050647.1	2815107	2816810
GCA_000743465.1	GCA_000743465.1_02946	inlC	class 1 internalin InlC2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	548	548	100.00	100.00	548	AAB67969.1	class 1 internalin InlC2	NA	NA	KN050647.1	2817018	2818664
GCA_000743465.1	GCA_000743465.1_02947	inlG	class 1 internalin InlG	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	490	490	100.00	100.00	490	AEO05269.1	class 1 internalin InlG	NA	NA	KN050647.1	2818802	2820274
GCA_000245495.1	GCA_000245495.1_00086	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP003033.1	103067	104425
GCA_000245495.1	GCA_000245495.1_00284	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP003033.1	329362	330717
GCA_000245495.1	GCA_000245495.1_00322	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP003033.1	363892	364503
GCA_000245495.1	GCA_000245495.1_01178	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	223	244	76.23	93.09	188	WP_007410443.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NA	NA	CP003033.1	1228836	1229507
GCA_000245495.1	GCA_000245495.1_01179	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP003033.1	1230037	1230687
GCA_000245495.1	GCA_000245495.1_01500	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP003033.1	1568999	1569751
GCA_000245495.1	GCA_000245495.1_01674	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP003033.1	1762411	1763703
GCA_000245495.1	GCA_000245495.1_01717	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP003033.1	1800946	1801662
GCA_000245495.1	GCA_000245495.1_01720	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP003033.1	1803437	1804159
GCA_000245495.1	GCA_000245495.1_01721	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP003033.1	1804284	1804991
GCA_000245495.1	GCA_000245495.1_01731	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP003033.1	1816640	1817623
GCA_000245495.1	GCA_000245495.1_01732	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP003033.1	1817625	1818545
GCA_000245495.1	GCA_000245495.1_01910	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP003033.1	1964798	1964932
GCA_000245495.1	GCA_000245495.1_02060	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP003033.1	2117316	2118758
GCA_000245495.1	GCA_000245495.1_02234	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP003033.1	2270807	2271226
GCA_000245495.1	GCA_000245495.1_02323	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP003033.1	2360406	2361371
GCA_000245495.1	GCA_000245495.1_02324	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP003033.1	2361939	2362886
GCA_000245495.1	GCA_000245495.1_02325	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP003033.1	2362888	2363865
GCA_000245495.1	GCA_000245495.1_02402	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1627	1115	61.43	99.12	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP003033.1	2441220	2446103
GCA_000245495.1	GCA_000245495.1_02548	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP003033.1	2603884	2605413
GCA_000245495.1	GCA_000245495.1_02582	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP003033.1	2648747	2649799
GCA_003492425.1	GCA_003492425.1_01704	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.60	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQMH01000007.1	68240	69478
GCA_003492425.1	GCA_003492425.1_01705	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQMH01000007.1	69726	70358
GCA_003492425.1	GCA_003492425.1_01848	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.24	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQMH01000009.1	14584	16110
GCA_003602765.1	GCA_003602765.1_01797	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	639	99.69	99.84	637	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	QTLR01000007.1	64239	66161
GCA_021367505.1	GCA_021367505.1_01360	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCOJ010000004.1	172212	173504
GCA_021367505.1	GCA_021367505.1_02463	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAHCOJ010000016.1	2286	3023
GCA_021367505.1	GCA_021367505.1_02468	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	98.05	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JAHCOJ010000016.1	8488	9105
GCA_021367505.1	GCA_021367505.1_02487	dfrK	trimethoprim-resistant dihydrofolate reductase DfrK	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	163	163	100.00	100.00	163	WP_012779617.1	trimethoprim-resistant dihydrofolate reductase DfrK	NF000332.1	DfrD/DfrG/DfrK family trimethoprim-resistant dihydrofolate reductase	JAHCOJ010000019.1	3233	3724
GCA_021367505.1	GCA_021367505.1_02488	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	JAHCOJ010000019.1	4007	5383
GCA_021367505.1	GCA_021367505.1_02489	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JAHCOJ010000019.1	5690	6433
GCA_021367505.1	GCA_021367505.1_02499	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHCOJ010000021.1	2232	2633
GCA_021367505.1	GCA_021367505.1_02500	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCOJ010000021.1	2651	3940
GCA_938037195.1	GCA_938037195.1_01309	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	99.84	99.22	638	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CALHQR010000020.1	9292	11211
GCA_000735365.1	GCA_000735365.1_00996	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	90.17	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	JMPL01000010.1	53126	54019
GCA_000735365.1	GCA_000735365.1_02340	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	92.31	143	AAD11743.1	silver-binding protein SilE	NA	NA	JMPL01000038.1	13354	13785
GCA_000735365.1	GCA_000735365.1_02341	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	491	491	100.00	98.98	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	JMPL01000038.1	14036	15511
GCA_000735365.1	GCA_000735365.1_02342	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	226	226	100.00	100.00	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	JMPL01000038.1	15504	16184
GCA_000735365.1	GCA_000735365.1_02343	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	461	461	100.00	100.00	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	JMPL01000038.1	16374	17759
GCA_000735365.1	GCA_000735365.1_02344	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	JMPL01000038.1	17788	18141
GCA_000735365.1	GCA_000735365.1_02345	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	98.14	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	JMPL01000038.1	18255	19547
GCA_000735365.1	GCA_000735365.1_02346	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	99.43	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	JMPL01000038.1	19558	22704
GCA_000735365.1	GCA_000735365.1_02348	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	94.85	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	JMPL01000038.1	23358	25805
GCA_000735365.1	GCA_000735365.1_02352	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	EXACTP	605	605	100.00	100.00	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	JMPL01000038.1	27787	29604
GCA_000735365.1	GCA_000735365.1_02353	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	99.66	296	CAA58526.1	copper-binding protein PcoB	NA	NA	JMPL01000038.1	29604	30500
GCA_000735365.1	GCA_000735365.1_02354	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	JMPL01000038.1	30540	30920
GCA_000735365.1	GCA_000735365.1_02355	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	BLASTP	309	309	100.00	99.68	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	JMPL01000038.1	30925	31854
GCA_000735365.1	GCA_000735365.1_02356	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	JMPL01000038.1	31909	32589
GCA_000735365.1	GCA_000735365.1_02357	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	98.93	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	JMPL01000038.1	32586	33986
GCA_000735365.1	GCA_000735365.1_02358	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	97.92	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	JMPL01000038.1	34202	34636
GCA_000735365.1	GCA_000735365.1_02729	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	142	139	100.00	80.58	139	WP_004857515.1	FosA family fosfomycin resistance glutathione transferase	NF000221.4	FosA family fosfomycin resistance glutathione transferase	JMPL01000050.1	23002	23430
GCA_000735365.1	GCA_000735365.1_03250	blaCTX-M-115	extended-spectrum class A beta-lactamase CTX-M-115	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_035895532.1	extended-spectrum class A beta-lactamase CTX-M-115	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	JMPL01000070.1	21269	22144
GCA_000735365.1	GCA_000735365.1_04148	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	731	100.00	82.63	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	JMPL01000126.1	79	2277
GCA_000735365.1	GCA_000735365.1_04495	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	98.63	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	JMPL01000162.1	525	965
GCA_000735365.1	GCA_000735365.1_04497	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	97.54	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	JMPL01000162.1	2180	2791
GCA_000735365.1	GCA_000735365.1_04498	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	97.97	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	JMPL01000162.1	2881	3768
GCA_000735365.1	GCA_000735365.1_04499	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.67	304	APX31172.1	heat resistance protein YfdX1	NA	NA	JMPL01000162.1	3871	4785
GCA_000735365.1	GCA_000735365.1_04500	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	EXACTP	152	152	100.00	100.00	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	JMPL01000162.1	4808	5266
GCA_000735365.1	GCA_000735365.1_04568	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	142	141	100.00	91.49	141	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	JMPL01000170.1	1558	1986
GCA_000735365.1	GCA_000735365.1_04569	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.44	429	AAB42204.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	JMPL01000170.1	1999	3288
GCA_000735365.1	GCA_000735365.1_04717	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	PARTIALP	262	189	87.30	96.36	165	CDY80020.1	small heat shock protein sHSP20	NA	NA	JMPL01000198.1	1055	1843
GCA_000735365.1	GCA_000735365.1_04768	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	98.18	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	JMPL01000213.1	918	1415
GCA_000277715.1	GCA_000277715.1_02410	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	284	98.94	55.87	281	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP002734.1	2641635	2642483
GCA_003989475.1	GCA_003989475.1_01209	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	RBMD01000023.1	837	1688
GCA_003989475.1	GCA_003989475.1_01218	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.30	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RBMD01000023.1	9570	10424
GCA_003989475.1	GCA_003989475.1_01236	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	RBMD01000027.1	319	1494
GCA_001811855.1	GCA_001811855.1_00772	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV806753.1	139896	141536
GCA_019685475.1	GCA_019685475.1_01441	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JABEMW010000003.1	66079	67152
GCA_019685475.1	GCA_019685475.1_02060	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	69.06	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JABEMW010000004.1	255271	255708
GCA_019685475.1	GCA_019685475.1_02341	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JABEMW010000006.1	62052	63341
GCA_023507525.1	GCA_023507525.1_01255	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.16	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	JAIYET010000001.1	1228172	1230286
GCA_019929285.1	GCA_019929285.1_00952	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	402	399	100.00	90.23	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JAHZPG010000001.1	957198	958406
GCA_022689945.1	GCA_022689945.1_00211	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCWI010000015.1	8818	10362
GCA_022689945.1	GCA_022689945.1_00212	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCWI010000015.1	10546	11106
GCA_022689945.1	GCA_022689945.1_00214	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JALCWI010000015.1	12410	13309
GCA_022689945.1	GCA_022689945.1_00215	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCWI010000015.1	13408	14874
GCA_022689945.1	GCA_022689945.1_00217	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWI010000016.1	496	1788
GCA_022689945.1	GCA_022689945.1_00221	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWI010000016.1	5471	5818
GCA_022689945.1	GCA_022689945.1_00232	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JALCWI010000017.1	5254	5625
GCA_022689945.1	GCA_022689945.1_00233	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JALCWI010000017.1	5625	7382
GCA_022689945.1	GCA_022689945.1_00234	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JALCWI010000017.1	7482	9488
GCA_022689945.1	GCA_022689945.1_00238	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JALCWI010000018.1	235	3309
GCA_022689945.1	GCA_022689945.1_01000	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JALCWI010000022.1	792	1334
GCA_022689945.1	GCA_022689945.1_01001	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JALCWI010000022.1	1427	2221
GCA_022689945.1	GCA_022689945.1_01437	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCWI010000002.1	443439	443819
GCA_022689945.1	GCA_022689945.1_01438	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCWI010000002.1	443809	445566
GCA_022689945.1	GCA_022689945.1_01439	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCWI010000002.1	445673	446518
GCA_024758685.1	GCA_024758685.1_01007	ymoA	expression modulating protein YmoA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	67	67	100.00	100.00	67	AAQ90017.1	expression modulating protein YmoA	NA	NA	CP096666.1	1073720	1073923
GCA_024758685.1	GCA_024758685.1_02220	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	94	102	97.06	49.53	107	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP096666.1	2308778	2309062
GCA_024758685.1	GCA_024758685.1_02352	yfeA	iron/manganese ABC transporter substrate-binding protein YfeA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	322	322	100.00	100.00	322	AAC46147.1	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	CP096666.1	2438672	2439640
GCA_024758685.1	GCA_024758685.1_02353	yfeB	iron/manganese ABC transporter ATP-binding protein YfeB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	296	296	100.00	100.00	296	AAC46148.1	iron/manganese ABC transporter ATP-binding protein YfeB	NA	NA	CP096666.1	2439637	2440527
GCA_024758685.1	GCA_024758685.1_02355	yfeD	iron/manganese ABC transporter permease subunit YfeD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	297	100.00	99.66	297	AAC46150.1	iron/manganese ABC transporter permease subunit YfeD	NA	NA	CP096666.1	2441408	2442301
GCA_024758685.1	GCA_024758685.1_02587	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	121	102	100.00	52.46	122	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP096666.1	2681631	2681996
GCA_024758685.1	GCA_024758685.1_04581	virF	virulence regulon transcriptional activator VirF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	271	271	100.00	97.79	271	AAD16833.1	virulence regulon transcriptional activator VirF	NA	NA	CP096669.1	3704	4519
GCA_024758685.1	GCA_024758685.1_04596	yopH	T3SS effector protein-tyrosine-phosphatase YopH	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	468	468	100.00	98.50	468	AJJ21453.1	T3SS effector protein-tyrosine-phosphatase YopH	NA	NA	CP096669.1	14714	16120
GCA_024758685.1	GCA_024758685.1_04598	yopJ	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	288	288	100.00	99.65	288	AKN09807.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	NF040632.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	CP096669.1	17803	18669
GCA_024758685.1	GCA_024758685.1_04599	yopO	type III secretion system effector protein kinase YopO/YpkA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	729	100.00	97.26	729	CFQ25321.1	type III secretion system effector protein kinase YopO/YpkA	NA	NA	CP096669.1	19065	21263
GCA_024758685.1	GCA_024758685.1_04632	yopE	type III secretion system effector GTPase activator YopE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	219	219	100.00	94.06	219	AJJ21471.1	type III secretion system effector GTPase activator YopE	NA	NA	CP096669.1	41492	42151
GCA_024758685.1	GCA_024758685.1_04645	yopT	T3SS effector cysteine protease YopT	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	322	322	100.00	92.55	322	AJJ21466.1	T3SS effector cysteine protease YopT	NA	NA	CP096669.1	50502	51470
GCA_024758685.1	GCA_024758685.1_04652	yopD	type III secretion system translocon subunit YopD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	306	100.00	97.71	306	AAK69210.1	type III secretion system translocon subunit YopD	NA	NA	CP096669.1	57186	58106
GCA_024758685.1	GCA_024758685.1_04653	yopB	type III secretion system translocon subunit YopB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	401	401	100.00	96.26	401	AAK69211.1	type III secretion system translocon subunit YopB	NA	NA	CP096669.1	58125	59330
GCA_024758685.1	GCA_024758685.1_04655	lcrV	type III secretion system needle tip protein LcrV	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	326	329	99.70	96.04	328	CNC59088.1	type III secretion system needle tip protein LcrV	NA	NA	CP096669.1	59827	60807
GCA_030515735.1	GCA_030515735.1_02017	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.42	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100366.1	2167052	2167906
GCA_007991595.1	GCA_007991595.1_01144	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	BJYQ01000070.1	10975	12894
GCA_007991595.1	GCA_007991595.1_01155	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	BJYQ01000070.1	22812	23549
GCA_014490515.1	GCA_014490515.1_00016	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP061029.1	16950	18242
GCA_014490515.1	GCA_014490515.1_00282	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP061029.1	276652	277293
GCA_014490515.1	GCA_014490515.1_00410	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP061029.1	365203	365583
GCA_014490515.1	GCA_014490515.1_00411	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP061029.1	365573	367330
GCA_014490515.1	GCA_014490515.1_00412	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP061029.1	367437	368282
GCA_014490515.1	GCA_014490515.1_02196	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP061029.1	2231267	2231614
GCA_014490515.1	GCA_014490515.1_02199	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP061029.1	2233792	2235081
GCA_014490515.1	GCA_014490515.1_02212	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	CP061029.1	2249559	2250197
GCA_014490515.1	GCA_014490515.1_02218	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP061029.1	2254813	2255184
GCA_014490515.1	GCA_014490515.1_02219	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP061029.1	2255184	2256941
GCA_014490515.1	GCA_014490515.1_02220	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP061029.1	2257041	2259047
GCA_014335175.1	GCA_014335175.1_00334	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PDHE01000001.1	370003	371427
GCA_003438245.1	GCA_003438245.1_00731	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	92.56	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	QSTR01000001.1	764371	766107
GCA_003438245.1	GCA_003438245.1_00732	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.99	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	QSTR01000001.1	766109	767833
GCA_003944315.1	GCA_003944315.1_00578	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.26	405	WP_000417517.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJPQ01000002.1	95596	96813
GCA_003944315.1	GCA_003944315.1_00579	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420317.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJPQ01000002.1	96933	98396
GCA_003443915.1	GCA_003443915.1_01462	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	CP010573.1	1565063	1566004
GCA_013009385.1	GCA_013009385.1_00262	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	267	268	99.63	62.59	270	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP053102.1	228558	229361
GCA_013009385.1	GCA_013009385.1_00304	mphK	macrolide 2-phosphotransferase MphK	core	AMR	AMR	MACROLIDE	TELITHROMYCIN/TYLOSIN	EXACTP	306	306	100.00	100.00	306	WP_003246254.1	macrolide 2-phosphotransferase MphK	NA	NA	CP053102.1	275848	276768
GCA_013009385.1	GCA_013009385.1_00646	vmlR	ABC-F type ribosomal protection protein VmlR	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOMYCIN/TIAMULIN/VIRGINIAMYCIN M	EXACTP	547	547	100.00	100.00	547	WP_003234144.1	ABC-F type ribosomal protection protein VmlR	NA	NA	CP053102.1	604748	606391
GCA_013009385.1	GCA_013009385.1_01973	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	144	140	100.00	75.00	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP053102.1	1916696	1917130
GCA_013009385.1	GCA_013009385.1_02079	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	309	98.06	66.99	306	WP_011053164.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	CP053102.1	2048566	2049486
GCA_013009385.1	GCA_013009385.1_02866	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP053102.1	2665588	2666382
GCA_013009385.1	GCA_013009385.1_02988	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	139	139	100.00	100.00	139	CAB14519.1	thioredoxin-dependent arsenate reductase	NA	NA	CP053102.1	2768330	2768749
GCA_013009385.1	GCA_013009385.1_02989	acr3	arsenite efflux transporter Acr3	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	346	346	100.00	100.00	346	CAB14520.2	arsenite efflux transporter Acr3	NA	NA	CP053102.1	2768761	2769801
GCA_013009385.1	GCA_013009385.1_03089	aadK	aminoglycoside 6-adenylyltransferase AadK	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	284	284	100.00	100.00	284	WP_003229862.1	aminoglycoside 6-adenylyltransferase AadK	NF000312.1	aminoglycoside 6-adenylyltransferase AadK	CP053102.1	2848690	2849544
GCA_013009385.1	GCA_013009385.1_03896	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP053102.1	3627213	3628589
GCA_013009385.1	GCA_013009385.1_04570	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	173	173	100.00	100.00	173	WP_003242546.1	streptothricin N-acetyltransferase SatA	NA	NA	CP053102.1	4285632	4286153
GCA_013009385.1	GCA_013009385.1_04573	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_003242953.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP053102.1	4288153	4289529
GCA_003044765.1	GCA_003044765.1_00586	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.30	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	POXX01000006.1	73060	74439
GCA_001836065.1	GCA_001836065.1_00692	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV827326.1	20452	21306
GCA_001836065.1	GCA_001836065.1_01763	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV827354.1	837	2261
GCA_002073835.2	GCA_002073835.2_00271	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP020451.2	283581	284009
GCA_002073835.2	GCA_002073835.2_00277	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP020451.2	289401	289829
GCA_002073835.2	GCA_002073835.2_00282	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP020451.2	291570	293033
GCA_002073835.2	GCA_002073835.2_00283	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP020451.2	293153	294370
GCA_002073835.2	GCA_002073835.2_01768	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP020451.2	1804126	1806045
GCA_002073835.2	GCA_002073835.2_01769	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP020451.2	1807152	1807889
GCA_003943505.1	GCA_003943505.1_00784	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJPS01000003.1	110507	111724
GCA_003943505.1	GCA_003943505.1_00785	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJPS01000003.1	111844	113307
GCA_022729025.1	GCA_022729025.1_01588	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	302	97.68	57.48	301	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JALDWN010000010.1	106863	107753
GCA_003043955.1	GCA_003043955.1_02164	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.46	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	PYXF01000002.1	682531	684009
GCA_937989655.1	GCA_937989655.1_01683	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.66	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CALKBS010000013.1	96020	97678
GCA_000213995.1	GCA_000213995.1_00134	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	294	300	97.67	89.42	293	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	GL892086.1	168566	169450
GCA_000213995.1	GCA_000213995.1_00354	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	225	217	94.01	66.34	205	WP_063843208.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	GL892086.1	400430	401107
GCA_000213995.1	GCA_000213995.1_00373	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	101	102	100.00	77.14	105	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	GL892086.1	420633	420938
GCA_000213995.1	GCA_000213995.1_01009	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	99.29	87.86	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	GL892086.1	1027952	1028383
GCA_000213995.1	GCA_000213995.1_02107	blaACT	ACT family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	191	381	50.13	100.00	191	WP_039272978.1	cephalosporin-hydrolyzing class C beta-lactamase ACT-37	NA	NA	GL892086.1	2157012	2157587
GCA_000213995.1	GCA_000213995.1_02278	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	EXACTP	143	143	100.00	100.00	143	AAD11743.1	silver-binding protein SilE	NA	NA	GL892086.1	2336353	2336784
GCA_000213995.1	GCA_000213995.1_02279	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	493	491	100.00	98.57	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	GL892086.1	2337029	2338510
GCA_000213995.1	GCA_000213995.1_02280	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	GL892086.1	2338503	2339183
GCA_000213995.1	GCA_000213995.1_02281	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.05	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	GL892086.1	2339373	2340758
GCA_000213995.1	GCA_000213995.1_02282	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	97.44	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	GL892086.1	2340786	2341139
GCA_000213995.1	GCA_000213995.1_02283	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	96.28	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	GL892086.1	2341253	2342545
GCA_000213995.1	GCA_000213995.1_02284	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.66	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	GL892086.1	2342556	2345702
GCA_000213995.1	GCA_000213995.1_02286	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	95.10	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	GL892086.1	2346355	2348802
GCA_000213995.1	GCA_000213995.1_02290	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.67	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	GL892086.1	2350784	2352601
GCA_000213995.1	GCA_000213995.1_02291	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	GL892086.1	2352601	2353497
GCA_000213995.1	GCA_000213995.1_02292	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	GL892086.1	2353537	2353917
GCA_000213995.1	GCA_000213995.1_02293	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	GL892086.1	2353922	2354851
GCA_000213995.1	GCA_000213995.1_02294	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	GL892086.1	2354906	2355586
GCA_000213995.1	GCA_000213995.1_02295	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	GL892086.1	2355583	2356983
GCA_000213995.1	GCA_000213995.1_02296	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	92.36	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	GL892086.1	2357201	2357635
GCA_000213995.1	GCA_000213995.1_02636	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	141	141	99.29	79.29	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	GL892087.1	373905	374330
GCA_000213995.1	GCA_000213995.1_03381	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	100.00	96.86	1050	WP_040224644.1	multidrug efflux RND transporter permease subunit OqxB27	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	GL892087.1	1152951	1156103
GCA_000213995.1	GCA_000213995.1_04647	dfrA51	trimethoprim-resistant dihydrofolate reductase DfrA51	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	158	158	100.00	100.00	158	WP_000781812.1	trimethoprim-resistant dihydrofolate reductase DfrA51	NF047324.1	trimethoprim-resistant dihydrofolate reductase DfrA51	GL892089.1	59088	59564
GCA_000479315.1	GCA_000479315.1_01063	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP006776.1	1027395	1027823
GCA_000479315.1	GCA_000479315.1_01296	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	92.39	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CP006776.1	1277794	1279530
GCA_000479315.1	GCA_000479315.1_01297	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.64	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CP006776.1	1279532	1281256
GCA_004362455.1	GCA_004362455.1_01193	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	RWKG01000039.1	1280	2920
GCA_004362455.1	GCA_004362455.1_01347	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	RWKG01000001.1	12383	13777
GCA_011714825.1	GCA_011714825.1_00805	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXQ01000025.1	113	1246
GCA_011714825.1	GCA_011714825.1_01372	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.22	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RXXQ01000003.1	55634	57553
GCA_011714825.1	GCA_011714825.1_01373	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RXXQ01000003.1	58660	59397
GCA_022690145.1	GCA_022690145.1_00145	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCVZ010000012.1	14617	16161
GCA_022690145.1	GCA_022690145.1_00146	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCVZ010000012.1	16345	16905
GCA_022690145.1	GCA_022690145.1_00148	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JALCVZ010000012.1	18209	19108
GCA_022690145.1	GCA_022690145.1_00149	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCVZ010000012.1	19207	20673
GCA_022690145.1	GCA_022690145.1_01063	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVZ010000003.1	133858	135150
GCA_022690145.1	GCA_022690145.1_01067	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVZ010000003.1	138833	139180
GCA_022690145.1	GCA_022690145.1_01781	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCVZ010000005.1	256566	256946
GCA_022690145.1	GCA_022690145.1_01782	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCVZ010000005.1	256936	258693
GCA_022690145.1	GCA_022690145.1_01783	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCVZ010000005.1	258800	259645
GCA_009664695.1	GCA_009664695.1_00444	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP045961.1	457129	458508
GCA_009664695.1	GCA_009664695.1_01200	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP045961.1	1227854	1228759
GCA_009664695.1	GCA_009664695.1_01329	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP045961.1	1363984	1365222
GCA_009664695.1	GCA_009664695.1_01330	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP045961.1	1365626	1366258
GCA_009664695.1	GCA_009664695.1_01332	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP045961.1	1367083	1368651
GCA_009664695.1	GCA_009664695.1_01523	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP045961.1	1571535	1573061
GCA_023109545.1	GCA_023109545.1_00398	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALDUO010000001.1	409583	411241
GCA_023109545.1	GCA_023109545.1_01044	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JALDUO010000002.1	372554	372982
GCA_000246925.2	GCA_000246925.2_00030	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	BAEW01000029.1	5796	7715
GCA_900452405.1	GCA_900452405.1_01681	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	216	218	87.61	46.35	192	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	UGNQ01000001.1	1707370	1708020
GCA_900452405.1	GCA_900452405.1_01682	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.19	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UGNQ01000001.1	1708041	1709465
GCA_900452405.1	GCA_900452405.1_01868	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	394	391	97.95	66.41	384	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	UGNQ01000001.1	1880616	1881800
GCA_002073475.2	GCA_002073475.2_00396	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	464	464	100.00	100.00	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP020411.2	409645	411039
GCA_001814645.1	GCA_001814645.1_01581	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	594	639	92.96	98.65	594	WP_033493020.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV817373.1	540	2324
GCA_001814645.1	GCA_001814645.1_01583	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.54	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV817373.1	4085	4939
GCA_002096525.1	GCA_002096525.1_00309	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	NCUM01000007.1	304619	305047
GCA_022568985.1	GCA_022568985.1_00534	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKRKE010000001.1	561496	561876
GCA_022568985.1	GCA_022568985.1_00535	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKRKE010000001.1	561866	563623
GCA_022568985.1	GCA_022568985.1_00536	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKRKE010000001.1	563730	564575
GCA_022568985.1	GCA_022568985.1_00967	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKE010000003.1	90248	91321
GCA_022568985.1	GCA_022568985.1_01100	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKE010000003.1	233907	235199
GCA_022568985.1	GCA_022568985.1_02321	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKE010000015.1	42866	43285
GCA_003943145.1	GCA_003943145.1_00321	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	RJOP01000001.1	326678	328597
GCA_900453215.1	GCA_900453215.1_01933	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	UASV01000007.1	609436	611355
GCA_025147325.1	GCA_025147325.1_01887	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP102262.1	2269641	2269967
GCA_025147325.1	GCA_025147325.1_02344	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	300	296	100.00	63.85	296	WP_005827792.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP102262.1	2768601	2769503
GCA_025147325.1	GCA_025147325.1_02661	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP102262.1	3107658	3109583
GCA_005233655.1	GCA_005233655.1_00529	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	94.34	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	QGAL01000001.1	542768	544942
GCA_005233655.1	GCA_005233655.1_00532	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	90.62	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	QGAL01000001.1	547358	551017
GCA_005233655.1	GCA_005233655.1_00533	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.18	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	QGAL01000001.1	551159	552274
GCA_005233655.1	GCA_005233655.1_00571	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	100.00	77.30	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	QGAL01000001.1	597237	597668
GCA_005233655.1	GCA_005233655.1_01220	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	122	102	100.00	66.94	124	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	QGAL01000001.1	1188445	1188813
GCA_005233655.1	GCA_005233655.1_03065	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	95.04	141	WP_038415208.1	fosfomycin resistance glutathione transferase FosA	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	QGAL01000004.1	323194	323619
GCA_005233655.1	GCA_005233655.1_03219	ampC-Ecan	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	381	381	100.00	100.00	381	WP_006178946.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	NF041666.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	QGAL01000004.1	490754	491899
GCA_005233655.1	GCA_005233655.1_04298	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	88.81	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	QGAL01000010.1	44053	44946
GCA_005233655.1	GCA_005233655.1_04778	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	285	285	100.00	87.72	285	WP_031942394.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	QGAL01000019.1	8068	8925
GCA_015273425.1	GCA_015273425.1_00594	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGRB010000001.1	628992	630284
GCA_015273425.1	GCA_015273425.1_02496	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACGRB010000009.1	18667	20211
GCA_015273425.1	GCA_015273425.1_02497	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACGRB010000009.1	20395	20955
GCA_015273425.1	GCA_015273425.1_02521	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGRB010000014.1	661	1146
GCA_000959895.1	GCA_000959895.1_01230	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_063856112.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JYGK01000005.1	60028	61947
GCA_001059815.1	GCA_001059815.1_00154	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.66	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JUOR01000039.1	2231	3889
GCA_018829755.1	GCA_018829755.1_01203	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHKJY010000003.1	108470	110110
GCA_018829755.1	GCA_018829755.1_01499	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.34	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JAHKJY010000004.1	51837	53231
GCA_016623605.1	GCA_016623605.1_01999	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089072.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	JAEHNZ010000004.1	28012	29217
GCA_016623605.1	GCA_016623605.1_02003	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JAEHNZ010000004.1	32183	32602
GCA_016623605.1	GCA_016623605.1_02004	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAEHNZ010000004.1	32602	33438
GCA_001471555.2	GCA_001471555.2_00015	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	LORZ02000001.1	10501	11142
GCA_001471555.2	GCA_001471555.2_00035	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LORZ02000001.1	32612	33901
GCA_001471555.2	GCA_001471555.2_00283	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	LORZ02000001.1	269971	271410
GCA_001471555.2	GCA_001471555.2_02242	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	LORZ02000002.1	718414	719487
GCA_001471555.2	GCA_001471555.2_02355	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LORZ02000002.1	862705	863994
GCA_001471555.2	GCA_001471555.2_02356	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	LORZ02000002.1	864012	864413
GCA_001471555.2	GCA_001471555.2_02403	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LORZ02000002.1	904808	906814
GCA_001471555.2	GCA_001471555.2_02598	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	1024	1024	100.00	99.80	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	LORZ02000004.1	16387	19461
GCA_001471555.2	GCA_001471555.2_02604	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LORZ02000004.1	25470	26315
GCA_001471555.2	GCA_001471555.2_02606	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	426	585	72.82	99.77	426	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	LORZ02000004.1	26899	28179
GCA_001471555.2	GCA_001471555.2_02607	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LORZ02000004.1	28169	28549
GCA_927910845.1	GCA_927910845.1_00926	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	350	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAKMOA010000077.1	41022	42074
GCA_003968865.1	GCA_003968865.1_01007	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	77.86	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	RXXB01000038.1	18077	19369
GCA_001051895.1	GCA_001051895.1_00001	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	LFKS01000010.1	129	872
GCA_001051895.1	GCA_001051895.1_00024	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	LFKS01000010.1	23175	23573
GCA_000759125.1	GCA_000759125.1_00002	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	97.54	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	JRNK01000001.1	2265	2633
GCA_000759125.1	GCA_000759125.1_01101	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.55	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JRNK01000016.1	77927	79219
GCA_000759125.1	GCA_000759125.1_02365	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JRNK01000041.1	6740	7120
GCA_000759125.1	GCA_000759125.1_02366	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JRNK01000041.1	7110	8867
GCA_000759125.1	GCA_000759125.1_02367	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JRNK01000041.1	8974	9819
GCA_000759125.1	GCA_000759125.1_02374	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JRNK01000042.1	53	613
GCA_000759125.1	GCA_000759125.1_02384	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JRNK01000042.1	9937	11481
GCA_000759125.1	GCA_000759125.1_02410	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JRNK01000045.1	193	564
GCA_000759125.1	GCA_000759125.1_02411	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JRNK01000045.1	564	2321
GCA_000759125.1	GCA_000759125.1_02412	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JRNK01000045.1	2421	4427
GCA_000759125.1	GCA_000759125.1_02418	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003264.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JRNK01000048.1	431	1165
GCA_900156035.1	GCA_900156035.1_01204	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	FTMH01000009.1	97368	98222
GCA_000144955.2	GCA_000144955.2_00035	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP002114.3	39177	41183
GCA_000144955.2	GCA_000144955.2_00036	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP002114.3	41283	42269
GCA_000144955.2	GCA_000144955.2_00072	selZ	staphylococcal enterotoxin type Z	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	259	259	100.00	99.23	259	SUK32596.1	staphylococcal enterotoxin type Z	NA	NA	CP002114.3	76914	77693
GCA_000144955.2	GCA_000144955.2_00125	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	99.78	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP002114.3	135813	137171
GCA_000144955.2	GCA_000144955.2_00318	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP002114.3	362321	363676
GCA_000144955.2	GCA_000144955.2_00354	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP002114.3	396778	397389
GCA_000144955.2	GCA_000144955.2_01427	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP002114.3	1519078	1520055
GCA_000144955.2	GCA_000144955.2_01428	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP002114.3	1520057	1520995
GCA_000144955.2	GCA_000144955.2_01777	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP002114.3	1863400	1864692
GCA_000144955.2	GCA_000144955.2_01824	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	95.38	238	ABD30999.1	serine protease SplE	NA	NA	CP002114.3	1903691	1904407
GCA_000144955.2	GCA_000144955.2_01834	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	97.43	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP002114.3	1912746	1913681
GCA_000144955.2	GCA_000144955.2_01996	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP002114.3	2043933	2044283
GCA_000144955.2	GCA_000144955.2_02001	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP002114.3	2046497	2046988
GCA_000144955.2	GCA_000144955.2_02076	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP002114.3	2099663	2099797
GCA_000144955.2	GCA_000144955.2_02224	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP002114.3	2250403	2251845
GCA_000144955.2	GCA_000144955.2_02485	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.03	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP002114.3	2493655	2494620
GCA_000144955.2	GCA_000144955.2_02486	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	94.29	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP002114.3	2495187	2496134
GCA_000144955.2	GCA_000144955.2_02487	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.85	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP002114.3	2496136	2497113
GCA_000144955.2	GCA_000144955.2_02704	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP002114.3	2731854	2733383
GCA_000144955.2	GCA_000144955.2_02738	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.43	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP002114.3	2776917	2777969
GCA_000144955.2	GCA_000144955.2_02784	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	99.51	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP002115.1	2286	2903
GCA_000144955.2	GCA_000144955.2_02792	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP002115.1	7916	8296
GCA_000144955.2	GCA_000144955.2_02793	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.56	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP002115.1	8286	10043
GCA_000144955.2	GCA_000144955.2_02794	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733289.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP002115.1	10150	10995
GCA_023148335.1	GCA_023148335.1_00670	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JAHXNY010000012.1	571	2352
GCA_023148335.1	GCA_023148335.1_00676	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JAHXNY010000014.1	143	589
GCA_023148335.1	GCA_023148335.1_00683	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JAHXNY010000015.1	899	1318
GCA_023148335.1	GCA_023148335.1_00684	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAHXNY010000015.1	1318	2154
GCA_023148335.1	GCA_023148335.1_00686	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAHXNY010000015.1	2358	3533
GCA_023148335.1	GCA_023148335.1_00692	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAHXNY010000018.1	195	1010
GCA_023148335.1	GCA_023148335.1_01574	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAHXNY010000004.1	163523	164377
GCA_023148335.1	GCA_023148335.1_02443	srtE	SpaH fimbrial biogenesis class C sortase SrtE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	348	348	100.00	95.69	348	CAE50751.1	SpaH fimbrial biogenesis class C sortase SrtE	NA	NA	JAHXNY010000009.1	95365	96411
GCA_023148335.1	GCA_023148335.1_02444	srtD	SpaH fimbrial biogenesis class C sortase SrtD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	318	318	100.00	98.43	318	CAE50752.1	SpaH fimbrial biogenesis class C sortase SrtD	NA	NA	JAHXNY010000009.1	96395	97351
GCA_015261905.1	GCA_015261905.1_00047	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JABZTW010000034.1	27390	28355
GCA_016658865.1	GCA_016658865.1_01150	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP067992.1	1164895	1166094
GCA_016658865.1	GCA_016658865.1_01491	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.90	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP067992.1	1443747	1445666
GCA_014169215.1	GCA_014169215.1_00028	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	96.45	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	AP022108.1	28596	29780
GCA_014169215.1	GCA_014169215.1_00716	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	724	724	100.00	100.00	724	AEG95593.1	siderophore salmochelin receptor IroN	NA	NA	AP022108.1	749879	752053
GCA_014169215.1	GCA_014169215.1_00719	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1222	1219	100.00	84.14	1223	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	AP022108.1	754466	758134
GCA_014169215.1	GCA_014169215.1_00720	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.49	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	AP022108.1	758181	759296
GCA_014169215.1	GCA_014169215.1_01447	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	144	141	99.29	86.43	140	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	AP022108.1	1536203	1536637
GCA_014169215.1	GCA_014169215.1_01623	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	570	600	95.00	99.82	570	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	AP022108.1	1753641	1755353
GCA_014169215.1	GCA_014169215.1_01624	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.50	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	AP022108.1	1755340	1757142
GCA_014169215.1	GCA_014169215.1_02900	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	97.33	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	AP022108.1	3077002	3080154
GCA_014169215.1	GCA_014169215.1_03260	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	98.04	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	AP022108.1	3471987	3473219
GCA_014169215.1	GCA_014169215.1_03803	ampC-Kaer	AmpC-Kaer family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	386	381	100.00	98.95	381	WP_063406924.1	extended-spectrum class C beta-lactamase AmpC-Kaer-1	NF041662.1	AmpC-Kaer family extended-spectrum class C beta-lactamase	AP022108.1	4044352	4045512
GCA_014169215.1	GCA_014169215.1_04191	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	96.40	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	AP022108.1	4482053	4482472
GCA_014169215.1	GCA_014169215.1_04608	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	298	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	AP022108.1	4937798	4938694
GCA_014169215.1	GCA_014169215.1_04839	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	120	100.00	69.42	121	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP022109.1	46337	46702
GCA_014169215.1	GCA_014169215.1_04842	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	142	141	99.29	85.00	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	AP022109.1	49880	50308
GCA_900099765.1	GCA_900099765.1_00803	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	493	494	99.60	64.71	493	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	FNDX01000009.1	89423	90904
GCA_900099765.1	GCA_900099765.1_02512	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	120	123	85.37	50.48	105	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	FNDX01000002.1	110065	110427
GCA_900099765.1	GCA_900099765.1_04104	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family A	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	165	169	94.67	66.25	160	AIQ64103.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	NF040503.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	FNDX01000040.1	1717	2214
GCA_009379395.1	GCA_009379395.1_01207	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCKH01000004.1	54840	55781
GCA_002285075.1	GCA_002285075.1_00999	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	NSGO01000002.1	265082	265936
GCA_029918385.1	GCA_029918385.1_00028	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JARDCP010000011.1	3722	4045
GCA_029918385.1	GCA_029918385.1_00033	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JARDCP010000013.1	526	1011
GCA_029918385.1	GCA_029918385.1_00703	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JARDCP010000002.1	113799	114872
GCA_029918385.1	GCA_029918385.1_02295	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JARDCP010000007.1	60455	61744
GCA_937890405.1	GCA_937890405.1_00728	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CALACA010000041.1	150462	152102
GCA_000788015.1	GCA_000788015.1_00576	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	100.00	99.76	410	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	JSZI01000006.1	4164	5396
GCA_000788015.1	GCA_000788015.1_02407	oqxA	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	EXACTP	391	391	100.00	100.00	391	WP_002914189.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NF000272.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	JSZI01000014.1	67385	68560
GCA_000788015.1	GCA_000788015.1_02408	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	EXACTP	1050	1050	100.00	100.00	1050	WP_000347934.1	multidrug efflux RND transporter permease subunit OqxB	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	JSZI01000014.1	68584	71736
GCA_000788015.1	GCA_000788015.1_02738	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	140	141	98.58	78.42	139	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	JSZI01000014.1	406641	407063
GCA_000788015.1	GCA_000788015.1_03198	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206356.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	JSZI01000015.1	50	829
GCA_000788015.1	GCA_000788015.1_03199	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	JSZI01000015.1	993	1340
GCA_000788015.1	GCA_000788015.1_03200	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JSZI01000015.1	1334	2173
GCA_000788015.1	GCA_000788015.1_03461	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	98.56	139	WP_004146118.1	FosA5 family fosfomycin resistance glutathione transferase	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	JSZI01000019.1	14489	14908
GCA_000788015.1	GCA_000788015.1_03511	blaSHV-11	broad-spectrum class A beta-lactamase SHV-11	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_004176269.1	broad-spectrum class A beta-lactamase SHV-11	NF000285.3	SHV family class A beta-lactamase	JSZI01000020.1	2283	3143
GCA_000788015.1	GCA_000788015.1_03664	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	EXACTP	189	189	100.00	100.00	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	JSZI01000021.1	2488	3057
GCA_000788015.1	GCA_000788015.1_03665	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	931	949	97.89	99.25	929	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	JSZI01000021.1	3172	5967
GCA_000788015.1	GCA_000788015.1_03682	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	116	116	100.00	100.00	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JSZI01000021.1	15413	15763
GCA_000788015.1	GCA_000788015.1_03683	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	91.67	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JSZI01000021.1	15813	16175
GCA_000788015.1	GCA_000788015.1_03684	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	583	583	100.00	100.00	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	JSZI01000021.1	16193	17944
GCA_000788015.1	GCA_000788015.1_03685	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	429	429	100.00	100.00	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	JSZI01000021.1	17992	19281
GCA_000788015.1	GCA_000788015.1_03686	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	141	141	100.00	100.00	141	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	JSZI01000021.1	19294	19719
GCA_000788015.1	GCA_000788015.1_03697	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	94.44	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	JSZI01000021.1	27755	28189
GCA_000788015.1	GCA_000788015.1_03698	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.14	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	JSZI01000021.1	28406	29806
GCA_000788015.1	GCA_000788015.1_03699	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	JSZI01000021.1	29803	30483
GCA_000788015.1	GCA_000788015.1_03700	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	BLASTP	309	309	100.00	99.68	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	JSZI01000021.1	30538	31467
GCA_000788015.1	GCA_000788015.1_03701	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	JSZI01000021.1	31472	31852
GCA_000788015.1	GCA_000788015.1_03702	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	JSZI01000021.1	31892	32788
GCA_000788015.1	GCA_000788015.1_03703	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.83	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	JSZI01000021.1	32788	34605
GCA_000788015.1	GCA_000788015.1_03707	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	94.49	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	JSZI01000021.1	36586	39033
GCA_000788015.1	GCA_000788015.1_03709	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.85	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	JSZI01000021.1	39687	42833
GCA_000788015.1	GCA_000788015.1_03710	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	97.67	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	JSZI01000021.1	42844	44136
GCA_000788015.1	GCA_000788015.1_03711	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	JSZI01000021.1	44250	44603
GCA_000788015.1	GCA_000788015.1_03712	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	461	461	100.00	100.00	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	JSZI01000021.1	44632	46017
GCA_000788015.1	GCA_000788015.1_03713	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	226	226	100.00	100.00	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	JSZI01000021.1	46207	46887
GCA_000788015.1	GCA_000788015.1_03714	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	491	491	100.00	100.00	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	JSZI01000021.1	46880	48355
GCA_000788015.1	GCA_000788015.1_03715	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	91.61	143	AAD11743.1	silver-binding protein SilE	NA	NA	JSZI01000021.1	48606	49037
GCA_000788015.1	GCA_000788015.1_03774	catA1	type A-1 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	219	219	100.00	100.00	219	WP_000412211.1	type A-1 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JSZI01000022.1	53925	54584
GCA_000788015.1	GCA_000788015.1_03884	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	JSZI01000024.1	39814	40716
GCA_000788015.1	GCA_000788015.1_04743	blaKPC-3	carbapenem-hydrolyzing class A beta-lactamase KPC-3	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	293	293	100.00	100.00	293	WP_004152396.1	carbapenem-hydrolyzing class A beta-lactamase KPC-3	NF012141.1	KPC family carbapenem-hydrolyzing class A beta-lactamase	JSZI01000052.1	8874	9755
GCA_000788015.1	GCA_000788015.1_04766	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	100.00	78.21	78	AAA88371.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	JSZI01000054.1	2173	2409
GCA_000788015.1	GCA_000788015.1_04767	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	120	121	100.00	82.64	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	JSZI01000054.1	2406	2768
GCA_000788015.1	GCA_000788015.1_04768	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	564	561	100.00	85.31	565	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JSZI01000054.1	2786	4480
GCA_000788015.1	GCA_000788015.1_04769	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	140	140	100.00	100.00	140	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	JSZI01000054.1	4532	4954
GCA_000788015.1	GCA_000788015.1_04816	aac(6)-Ib	aminoglycoside N-acetyltransferase AAC(6)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	201	184	100.00	100.00	184	WP_014454105.1	aminoglycoside N-acetyltransferase AAC(6)-Ib	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	JSZI01000064.1	3941	4546
GCA_000788015.1	GCA_000788015.1_04900	dfrA12	trimethoprim-resistant dihydrofolate reductase DfrA12	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_001083725.1	trimethoprim-resistant dihydrofolate reductase DfrA12	NF000053.2	trimethoprim-resistant dihydrofolate reductase DfrA12	JSZI01000073.1	637	1134
GCA_000788015.1	GCA_000788015.1_04913	mph(A)	Mph(A) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	301	301	100.00	100.00	301	WP_000219391.1	Mph(A) family macrolide 2-phosphotransferase	NF000254.1	Mph(A) family macrolide 2-phosphotransferase	JSZI01000077.1	2375	3280
GCA_000788015.1	GCA_000788015.1_04915	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JSZI01000080.1	372	1187
GCA_000788015.1	GCA_000788015.1_05176	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	116	102	100.00	56.91	123	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	JSZI01000083.1	262354	262704
GCA_000788015.1	GCA_000788015.1_05423	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.24	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	JSZI01000084.1	79979	81163
GCA_000287615.1	GCA_000287615.1_01820	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	ALJP01000022.1	5562	7202
GCA_015274055.1	GCA_015274055.1_01693	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACGPZ010000007.1	116534	117607
GCA_015274055.1	GCA_015274055.1_02139	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPZ010000012.1	60499	61788
GCA_015274055.1	GCA_015274055.1_02514	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPZ010000019.1	25008	26297
GCA_015274055.1	GCA_015274055.1_02515	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACGPZ010000019.1	26315	26716
GCA_015274055.1	GCA_015274055.1_02525	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACGPZ010000020.1	2289	3833
GCA_015274055.1	GCA_015274055.1_02526	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACGPZ010000020.1	4017	4577
GCA_015274055.1	GCA_015274055.1_02529	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGPZ010000020.1	6368	6748
GCA_015274055.1	GCA_015274055.1_02530	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGPZ010000020.1	6738	8495
GCA_015274055.1	GCA_015274055.1_02531	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGPZ010000020.1	8602	9447
GCA_015274055.1	GCA_015274055.1_02573	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACGPZ010000023.1	2501	4507
GCA_015274055.1	GCA_015274055.1_02574	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JACGPZ010000023.1	4607	5593
GCA_015274055.1	GCA_015274055.1_02599	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACGPZ010000029.1	1183	1917
GCA_015274055.1	GCA_015274055.1_02601	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JACGPZ010000030.1	400	1839
GCA_015274055.1	GCA_015274055.1_02603	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGPZ010000031.1	1158	1643
GCA_900240185.1	GCA_900240185.1_01800	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LT963442.1	1751072	1751452
GCA_900240185.1	GCA_900240185.1_01801	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LT963442.1	1751442	1753199
GCA_900240185.1	GCA_900240185.1_01802	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LT963442.1	1753306	1754151
GCA_900240185.1	GCA_900240185.1_02004	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LT963442.1	1962839	1963186
GCA_900240185.1	GCA_900240185.1_02007	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LT963442.1	1965354	1966643
GCA_900240185.1	GCA_900240185.1_02300	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	99.07	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	LT963442.1	2232093	2232416
GCA_001064585.1	GCA_001064585.1_01360	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVLK01000017.1	97438	99096
GCA_001812845.1	GCA_001812845.1_00263	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV810574.1	3529	5310
GCA_001812845.1	GCA_001812845.1_01570	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.13	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV810592.1	43484	44338
GCA_030264095.1	GCA_030264095.1_00180	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP127096.1	169584	170876
GCA_030264095.1	GCA_030264095.1_00351	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP127096.1	338742	339587
GCA_030264095.1	GCA_030264095.1_00352	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP127096.1	339694	341451
GCA_030264095.1	GCA_030264095.1_00353	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP127096.1	341441	341821
GCA_030264095.1	GCA_030264095.1_01437	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP127096.1	1357544	1357939
GCA_030264095.1	GCA_030264095.1_01438	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	PARTIALP	294	429	68.53	96.60	294	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP127096.1	1357957	1358841
GCA_030264095.1	GCA_030264095.1_01440	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP127096.1	1359245	1359559
GCA_030264095.1	GCA_030264095.1_02541	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	97.56	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP127097.1	8309	8926
GCA_030264095.1	GCA_030264095.1_02551	str	streptomycin adenylyltransferase Str	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	282	282	100.00	100.00	282	WP_031916103.1	streptomycin adenylyltransferase Str	NF000062.1	streptomycin adenylyltransferase Str	CP127098.1	561	1409
GCA_025147145.1	GCA_025147145.1_01685	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXOO010000006.1	38037	39458
GCA_025147145.1	GCA_025147145.1_01686	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	220	212	96.70	45.63	206	CAC86907.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JALXOO010000006.1	39509	40171
GCA_030405845.1	GCA_030405845.1_00370	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089068.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	JASGBG010000016.1	4158	5363
GCA_030405845.1	GCA_030405845.1_00664	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASGBG010000001.1	264840	266480
GCA_030405845.1	GCA_030405845.1_00743	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASGBG010000002.1	55290	55712
GCA_000156575.1	GCA_000156575.1_01204	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	GG666045.1	44915	46834
GCA_024758865.1	GCA_024758865.1_00756	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	97.97	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103072.1	979592	981517
GCA_024758865.1	GCA_024758865.1_02375	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.33	76.12	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103072.1	3160035	3160916
GCA_024758865.1	GCA_024758865.1_03709	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	99.77	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103072.1	4819287	4820618
GCA_029926485.1	GCA_029926485.1_00097	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAREHH010000012.1	22471	22956
GCA_029926485.1	GCA_029926485.1_00103	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAREHH010000013.1	3925	4248
GCA_029926485.1	GCA_029926485.1_00880	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREHH010000002.1	361957	363030
GCA_029926485.1	GCA_029926485.1_02154	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHH010000007.1	60455	61744
GCA_009932885.2	GCA_009932885.2_00038	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP084229.1	46957	47349
GCA_009932885.2	GCA_009932885.2_00039	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084229.1	47367	48659
GCA_009932885.2	GCA_009932885.2_00113	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.79	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084229.1	116880	118172
GCA_009932885.2	GCA_009932885.2_00253	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP084229.1	269307	270152
GCA_009932885.2	GCA_009932885.2_00254	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.74	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP084229.1	270259	272016
GCA_009932885.2	GCA_009932885.2_00255	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	97.62	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP084229.1	272006	272386
GCA_009932885.2	GCA_009932885.2_02401	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP084230.1	20863	21423
GCA_009932885.2	GCA_009932885.2_02402	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP084230.1	21607	23151
GCA_021497985.1	GCA_021497985.1_00596	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP049802.1	631649	632941
GCA_021497985.1	GCA_021497985.1_02494	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CP049805.1	267	752
GCA_901873485.1	GCA_901873485.1_01651	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	92.28	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CABFLH010000041.1	6637	8115
GCA_009378585.1	GCA_009378585.1_01524	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCL01000007.1	54574	55515
GCA_900458595.1	GCA_900458595.1_00046	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	PARTIALP	88	122	72.13	96.59	88	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	UHDN01000002.1	21926	22192
GCA_900458595.1	GCA_900458595.1_00092	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHDN01000001.1	32060	33349
GCA_900458595.1	GCA_900458595.1_00190	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHDN01000001.1	138126	139418
GCA_000771185.1	GCA_000771185.1_01509	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	137	121	100.00	43.31	127	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JDTX01000025.1	6229	6642
GCA_024104855.1	GCA_024104855.1_00259	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTR010000014.1	23936	24346
GCA_916715745.1	GCA_916715745.1_01823	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAKAPF010000027.1	1538	2392
GCA_000379145.1	GCA_000379145.1_06079	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	272	99.26	69.26	270	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	KB900701.1	6481079	6481888
GCA_000379145.1	GCA_000379145.1_07801	blaBJP	BJP family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	295	294	99.66	85.32	293	WP_011088970.1	BJP family subclass B3 metallo-beta-lactamase	NF012140.0	BJP family subclass B3 metallo-beta-lactamase	KB900701.1	8201391	8202278
GCA_000379145.1	GCA_000379145.1_07858	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	305	97.38	54.21	297	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	KB900701.1	8269825	8270724
GCA_016028255.1	GCA_016028255.1_01260	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	402	399	100.00	90.73	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP065707.1	1235695	1236903
GCA_000018965.1	GCA_000018965.1_01009	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP000918.1	930884	932083
GCA_000018965.1	GCA_000018965.1_01136	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP000918.1	1038902	1039330
GCA_003625535.1	GCA_003625535.1_01218	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZGK01000004.1	101656	102597
GCA_022664405.1	GCA_022664405.1_00505	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	396	561	68.27	43.51	393	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRLB010000013.1	84043	85233
GCA_022664405.1	GCA_022664405.1_00978	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	481	631	74.01	45.93	479	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRLB010000002.1	134078	135523
GCA_900477945.1	GCA_900477945.1_01285	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LS483458.1	1267159	1268553
GCA_002554715.1	GCA_002554715.1_00828	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PDEV01000001.1	957565	959205
GCA_015260375.1	GCA_015260375.1_01753	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	610	321	90.34	99.66	290	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JABZWV010000044.1	4957	6789
GCA_015260375.1	GCA_015260375.1_01855	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZWV010000049.1	15898	17088
GCA_015260375.1	GCA_015260375.1_02087	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.38	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JABZWV010000059.1	9672	11597
GCA_025152095.1	GCA_025152095.1_02205	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXVY010000046.1	5233	6633
GCA_022291175.1	GCA_022291175.1_00595	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAANHL010000001.1	631103	632395
GCA_022291175.1	GCA_022291175.1_01070	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAANHL010000001.1	1068480	1068965
GCA_022291175.1	GCA_022291175.1_02478	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAANHL010000008.1	1454	1834
GCA_022291175.1	GCA_022291175.1_02479	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAANHL010000008.1	1824	3581
GCA_022291175.1	GCA_022291175.1_02480	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAANHL010000008.1	3688	4533
GCA_022291175.1	GCA_022291175.1_02492	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	459	459	100.00	99.78	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAANHL010000010.1	1110	2489
GCA_022291175.1	GCA_022291175.1_02514	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAANHL010000014.1	80	1519
GCA_022291175.1	GCA_022291175.1_02517	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAANHL010000005.1	497	982
GCA_022291175.1	GCA_022291175.1_02525	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAANHL010000007.1	4783	5577
GCA_022291175.1	GCA_022291175.1_02526	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAANHL010000007.1	5670	6212
GCA_022291175.1	GCA_022291175.1_02527	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAANHL010000007.1	6209	7117
GCA_022291175.1	GCA_022291175.1_02528	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAANHL010000007.1	7422	8159
GCA_000185645.1	GCA_000185645.1_00449	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_004632336.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	GL622607.1	460131	462050
GCA_000185645.1	GCA_000185645.1_00450	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	GL622607.1	463157	463894
GCA_022690325.1	GCA_022690325.1_00278	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCVS010000014.1	11441	12907
GCA_022690325.1	GCA_022690325.1_02019	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVS010000007.1	93133	93480
GCA_022690325.1	GCA_022690325.1_02022	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVS010000007.1	95648	96937
GCA_000178355.1	GCA_000178355.1_00950	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	ADNB01000091.1	11192	12670
GCA_016403285.1	GCA_016403285.1_00359	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP066290.1	382174	383616
GCA_009496755.1	GCA_009496755.1_01540	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIIU01000005.1	109469	110668
GCA_005670605.1	GCA_005670605.1_00294	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	294	98.98	65.76	295	WP_063842628.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	POTO01000002.1	287685	288596
GCA_005670605.1	GCA_005670605.1_03171	tet(V)	tetracycline efflux MFS transporter Tet(V)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	416	419	98.09	67.40	411	WP_003896589.1	tetracycline efflux MFS transporter Tet(V)	NF012178.0	tetracycline efflux MFS transporter Tet(V)	POTO01000010.1	167172	168422
GCA_005670605.1	GCA_005670605.1_04257	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	392	95.66	62.47	381	WP_003971483.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	POTO01000014.1	238107	239282
GCA_000153685.2	GCA_000153685.2_00280	aac(2)-Ic	aminoglycoside N-acetyltransferase AAC(2)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	181	181	100.00	100.00	181	WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	NF000034.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	CP001664.1	314630	315175
GCA_000153685.2	GCA_000153685.2_02089	erm(37)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	150	179	83.80	99.33	150	WP_003900446.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	NA	NA	CP001664.1	2231399	2231851
GCA_000153685.2	GCA_000153685.2_02176	blaC	class A beta-lactamase BlaC	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	307	307	100.00	100.00	307	WP_003410677.1	class A beta-lactamase BlaC	NF041154.1	class A beta-lactamase BlaC	CP001664.1	2330518	2331441
GCA_014202695.1	GCA_014202695.1_00799	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_011860841.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JACHHH010000003.1	131892	133811
GCA_014202695.1	GCA_014202695.1_00811	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.18	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JACHHH010000003.1	145283	146020
GCA_014202695.1	GCA_014202695.1_00814	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JACHHH010000003.1	147696	148490
GCA_014202695.1	GCA_014202695.1_01652	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.87	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JACHHH010000008.1	63167	64645
GCA_014202695.1	GCA_014202695.1_02083	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACHHH010000012.1	36304	36726
GCA_902385495.1	GCA_902385495.1_01529	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CABMFV010000002.1	287235	288527
GCA_902385495.1	GCA_902385495.1_02547	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CABMFV010000014.1	17167	18012
GCA_902385495.1	GCA_902385495.1_02548	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CABMFV010000014.1	18119	19876
GCA_902385495.1	GCA_902385495.1_02549	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CABMFV010000014.1	19866	20246
GCA_902385495.1	GCA_902385495.1_02559	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CABMFV010000015.1	10847	12139
GCA_902385495.1	GCA_902385495.1_02563	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABMFV010000015.1	15840	16187
GCA_902385495.1	GCA_902385495.1_02627	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CABMFV010000020.1	1700	3166
GCA_902385495.1	GCA_902385495.1_02632	catA	type A-7 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	215	215	100.00	97.21	215	WP_002489529.1	type A-7 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CABMFV010000021.1	1651	2298
GCA_902385495.1	GCA_902385495.1_02636	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CABMFV010000023.1	41	526
GCA_023520755.1	GCA_023520755.1_00028	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	229	232	99.14	66.52	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CP097376.1	20476	21165
GCA_023520755.1	GCA_023520755.1_00029	vanS	vancomycin resistance histidine kinase VanS	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	373	392	93.88	53.62	373	WP_011461302.1	vancomycin resistance histidine kinase VanS	NF033091.0	vancomycin resistance histidine kinase VanS	CP097376.1	21158	22279
GCA_023520755.1	GCA_023520755.1_02681	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	128	121	100.00	48.06	129	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP097376.1	2732359	2732745
GCA_000176735.1	GCA_000176735.1_01003	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	ADBE01000060.1	55598	56461
GCA_000176735.1	GCA_000176735.1_01004	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	ADBE01000060.1	56478	57716
GCA_000176735.1	GCA_000176735.1_01212	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	ADBE01000039.1	12461	13840
GCA_000176735.1	GCA_000176735.1_01543	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	ADBE01000030.1	20456	21361
GCA_000176735.1	GCA_000176735.1_01899	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	ADBE01000014.1	13776	15302
GCA_022695885.1	GCA_022695885.1_00033	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAKUUV010000001.1	34353	34838
GCA_022695885.1	GCA_022695885.1_00039	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKUUV010000001.1	38592	40598
GCA_022695885.1	GCA_022695885.1_00040	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JAKUUV010000001.1	40698	42455
GCA_022695885.1	GCA_022695885.1_00041	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JAKUUV010000001.1	42455	42826
GCA_022695885.1	GCA_022695885.1_00060	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKUUV010000001.1	60908	62200
GCA_022695885.1	GCA_022695885.1_00064	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	47.11	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKUUV010000001.1	65883	66230
GCA_022695885.1	GCA_022695885.1_00261	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAKUUV010000001.1	258665	260104
GCA_022695885.1	GCA_022695885.1_00275	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKUUV010000001.1	275996	276841
GCA_022695885.1	GCA_022695885.1_00276	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.57	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKUUV010000001.1	276948	278705
GCA_022695885.1	GCA_022695885.1_00277	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	97.62	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKUUV010000001.1	278695	279075
GCA_022695885.1	GCA_022695885.1_02297	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKUUV010000001.1	2260382	2262022
GCA_022695885.1	GCA_022695885.1_02333	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKUUV010000002.1	15371	16837
GCA_022695885.1	GCA_022695885.1_02334	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAKUUV010000002.1	16936	17835
GCA_022695885.1	GCA_022695885.1_02335	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKUUV010000002.1	18551	19396
GCA_022695885.1	GCA_022695885.1_02336	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKUUV010000002.1	19503	21260
GCA_022695885.1	GCA_022695885.1_02337	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKUUV010000002.1	21250	21630
GCA_022695885.1	GCA_022695885.1_02340	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAKUUV010000002.1	23416	23976
GCA_022695885.1	GCA_022695885.1_02341	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	504	514	98.05	100.00	504	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAKUUV010000002.1	24191	25705
GCA_022695885.1	GCA_022695885.1_02351	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAKUUV010000005.1	663	1148
GCA_014931335.1	GCA_014931335.1_01044	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP063113.1	1050964	1051824
GCA_014931335.1	GCA_014931335.1_01055	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP063113.1	1058624	1059460
GCA_014931335.1	GCA_014931335.1_01056	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP063113.1	1059460	1060263
GCA_014931335.1	GCA_014931335.1_01057	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	271	271	100.00	99.63	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP063113.1	1060324	1061139
GCA_014931335.1	GCA_014931335.1_01058	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP063113.1	1061539	1062354
GCA_900104195.1	GCA_900104195.1_00003	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	68.42	266	WP_006745469.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	FNJE01000042.1	354	1154
GCA_900104195.1	GCA_900104195.1_00869	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	295	99.32	84.01	294	WP_064964747.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	FNJE01000033.1	6124	7008
GCA_900104195.1	GCA_900104195.1_02036	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	292	100.00	64.51	293	WP_002977989.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	FNJE01000011.1	69082	69963
GCA_900104195.1	GCA_900104195.1_02143	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	FNJE01000038.1	227	1090
GCA_029918745.1	GCA_029918745.1_00070	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JARDBW010000011.1	19511	20977
GCA_029918745.1	GCA_029918745.1_00073	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JARDBW010000011.1	22777	23157
GCA_029918745.1	GCA_029918745.1_00074	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JARDBW010000011.1	23147	24904
GCA_029918745.1	GCA_029918745.1_00075	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JARDBW010000011.1	25011	25856
GCA_029918745.1	GCA_029918745.1_01483	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JARDBW010000003.1	135436	136728
GCA_030408635.1	GCA_030408635.1_00932	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP047198.1	943138	944559
GCA_030408635.1	GCA_030408635.1_00943	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	148	148	100.00	96.62	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP047198.1	949854	950300
GCA_000829055.1	GCA_000829055.1_02839	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	111	107	96.26	54.29	105	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP012544.1	2824472	2824807
GCA_013394405.1	GCA_013394405.1_01781	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP022867.1	1709070	1710464
GCA_008586765.1	GCA_008586765.1_02416	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	94.83	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP043811.1	1995278	1996672
GCA_002901845.1	GCA_002901845.1_01292	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	PPQE01000004.1	2254	3633
GCA_000738335.1	GCA_000738335.1_01466	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JFCL01000027.1	171985	173427
GCA_000738335.1	GCA_000738335.1_01693	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.18	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCL01000030.1	129399	130253
GCA_905373855.1	GCA_905373855.1_00119	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CAJPUH010000002.1	44091	44828
GCA_905373855.1	GCA_905373855.1_00120	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAJPUH010000002.1	45937	47856
GCA_024204845.1	GCA_024204845.1_00053	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP093193.1	57994	60000
GCA_024204845.1	GCA_024204845.1_00054	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP093193.1	60100	61086
GCA_024204845.1	GCA_024204845.1_00072	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	CP093193.1	76304	76639
GCA_024204845.1	GCA_024204845.1_00073	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP093193.1	76697	78340
GCA_024204845.1	GCA_024204845.1_00074	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP093193.1	78422	79072
GCA_024204845.1	GCA_024204845.1_00083	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP093193.1	86471	87760
GCA_024204845.1	GCA_024204845.1_00189	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP093193.1	197575	197811
GCA_024204845.1	GCA_024204845.1_00241	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP093193.1	257193	258260
GCA_024204845.1	GCA_024204845.1_00915	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093193.1	937605	938450
GCA_024204845.1	GCA_024204845.1_00916	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093193.1	938557	940314
GCA_024204845.1	GCA_024204845.1_00917	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093193.1	940304	940684
GCA_015070475.1	GCA_015070475.1_00693	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JADCSQ010000012.1	12349	13638
GCA_015070475.1	GCA_015070475.1_00771	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JADCSQ010000013.1	22675	23748
GCA_015070475.1	GCA_015070475.1_02382	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JADCSQ010000009.1	64	411
GCA_015070475.1	GCA_015070475.1_02439	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JADCSQ010000009.1	64286	64708
GCA_015556995.1	GCA_015556995.1_02680	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JADNNJ010000006.1	126739	127704
GCA_009496395.1	GCA_009496395.1_01560	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIKE01000006.1	36919	38118
GCA_001808345.1	GCA_001808345.1_00351	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KV793031.1	60371	61660
GCA_001808345.1	GCA_001808345.1_00353	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	KV793031.1	61967	62347
GCA_001808345.1	GCA_001808345.1_00354	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	KV793031.1	62337	64094
GCA_001808345.1	GCA_001808345.1_00355	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	KV793031.1	64201	65046
GCA_001808345.1	GCA_001808345.1_00396	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KV793032.1	19794	20867
GCA_001808345.1	GCA_001808345.1_00437	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	KV793032.1	74255	74677
GCA_001808345.1	GCA_001808345.1_00541	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	KV793035.1	7236	7796
GCA_001808345.1	GCA_001808345.1_00542	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	KV793035.1	7980	9524
GCA_020097335.1	GCA_020097335.1_01946	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP083627.1	1813807	1815006
GCA_026781795.1	GCA_026781795.1_00889	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAKUVM010000001.1	199657	201120
GCA_026781795.1	GCA_026781795.1_00890	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAKUVM010000001.1	201240	202457
GCA_001457615.1	GCA_001457615.1_00430	mexA	multidrug efflux RND transporter periplasmic adaptor subunit MexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	383	383	100.00	100.00	383	AAA74436.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	NF033834.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	LN831024.1	463202	464353
GCA_001457615.1	GCA_001457615.1_00839	aph(3)-IIb	aminoglycoside O-phosphotransferase APH(3)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	267	268	100.00	99.25	268	WP_003113011.1	aminoglycoside O-phosphotransferase APH(3)-IIb	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	LN831024.1	881871	882674
GCA_001457615.1	GCA_001457615.1_00848	blaPDC-5	extended-spectrum class C beta-lactamase PDC-5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	397	397	100.00	100.00	397	WP_003119095.1	extended-spectrum class C beta-lactamase PDC-5	NF000422.6	PDC family class C beta-lactamase	LN831024.1	895028	896221
GCA_001457615.1	GCA_001457615.1_02583	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	414	414	100.00	100.00	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	LN831024.1	2684489	2685733
GCA_001457615.1	GCA_001457615.1_03119	mexX	multidrug efflux RND transporter periplasmic adaptor subunit MexX	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	396	396	100.00	99.24	396	AAF14522.1	multidrug efflux RND transporter periplasmic adaptor subunit MexX	NA	NA	LN831024.1	3298363	3299553
GCA_001457615.1	GCA_001457615.1_04061	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	135	135	100.00	99.26	135	WP_003082280.1	FosA family fosfomycin resistance glutathione transferase	NF000094.1	FosA family fosfomycin resistance glutathione transferase	LN831024.1	4302773	4303180
GCA_001457615.1	GCA_001457615.1_04550	catB7	type B-4 chloramphenicol O-acetyltransferase CatB7	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	212	212	100.00	98.58	212	WP_003112709.1	type B-4 chloramphenicol O-acetyltransferase CatB7	NF000490.1	type B chloramphenicol O-acetyltransferase	LN831024.1	4771711	4772349
GCA_001457615.1	GCA_001457615.1_05931	blaOXA-904	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-904	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	262	262	100.00	100.00	262	WP_003122322.1	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-904	NF000432.2	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase	LN831024.1	6258108	6258896
GCA_018128045.1	GCA_018128045.1_00062	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072361.1	74896	76086
GCA_030220105.1	GCA_030220105.1_00035	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP126540.1	39155	41161
GCA_030220105.1	GCA_030220105.1_00036	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP126540.1	41261	43018
GCA_030220105.1	GCA_030220105.1_00037	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	123	123	100.00	99.19	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP126540.1	43018	43389
GCA_030220105.1	GCA_030220105.1_00072	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	97.71	94.53	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP126540.1	73449	73850
GCA_030220105.1	GCA_030220105.1_00073	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP126540.1	73868	75157
GCA_030220105.1	GCA_030220105.1_00254	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	142	143	88.81	58.78	131	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP126540.1	289401	289829
GCA_030220105.1	GCA_030220105.1_00332	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	97.34	488	WP_063854317.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP126540.1	385155	386621
GCA_030220105.1	GCA_030220105.1_01260	sal	Sal family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	HMM	543	543	100.00	69.24	543	WP_096809342.1	Sal family ABC-F type ribosomal protection protein	NF000169.2	Sal family ABC-F type ribosomal protection protein	CP126540.1	1299391	1301022
GCA_030220105.1	GCA_030220105.1_02002	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.01	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP126540.1	2049469	2050758
GCA_030220105.1	GCA_030220105.1_02307	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP126540.1	2346612	2347109
GCA_030220105.1	GCA_030220105.1_02341	fusF	fusidic acid resistance EF-G-binding protein FusF	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	BLASTP	214	214	100.00	96.73	214	WP_063851267.1	fusidic acid resistance EF-G-binding protein FusF	NF000503.1	fusidic acid resistance EF-G-binding protein FusF	CP126540.1	2375166	2375810
GCA_030220105.1	GCA_030220105.1_02366	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	282	281	99.29	53.41	279	WP_000733274.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP126540.1	2402664	2403512
GCA_030220105.1	GCA_030220105.1_02718	fexA	chloramphenicol/florfenicol efflux MFS transporter FexA	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	475	475	100.00	100.00	475	WP_015585966.1	chloramphenicol/florfenicol efflux MFS transporter FexA	NF000218.1	chloramphenicol/florfenicol efflux MFS transporter FexA	CP126541.1	10747	12174
GCA_030220105.1	GCA_030220105.1_02723	cfr	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	core	AMR	AMR	LINCOSAMIDE/OXAZOLIDINONE/PHENICOL/PLEUROMUTILIN/STREPTOGRAMIN	CHLORAMPHENICOL/CLINDAMYCIN/FLORFENICOL/LINEZOLID/STREPTOGRAMIN B/TIAMULIN/VIRGINIAMYCIN	EXACTP	349	349	100.00	100.00	349	WP_001010505.1	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	CP126541.1	14841	15890
GCA_030546245.1	GCA_030546245.1_00495	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAUONP010000001.1	177867	179084
GCA_030546245.1	GCA_030546245.1_00496	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAUONP010000001.1	179204	180667
GCA_030546245.1	GCA_030546245.1_00502	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAUONP010000001.1	184101	184529
GCA_030546245.1	GCA_030546245.1_00850	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAUONP010000002.1	45240	47159
GCA_030546245.1	GCA_030546245.1_01624	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAUONP010000005.1	97604	99262
GCA_002993105.1	GCA_002993105.1_01103	blaOXA-818	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-818	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	273	273	100.00	100.00	273	WP_034670108.1	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-818	NF000266.2	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase	CP027365.1	1177377	1178198
GCA_002993105.1	GCA_002993105.1_01888	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	287	285	97.54	40.14	284	WP_063864745.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	CP027365.1	1987458	1988321
GCA_002993105.1	GCA_002993105.1_02072	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	397	97.98	77.38	389	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP027365.1	2182671	2183858
GCA_001697985.1	GCA_001697985.1_00872	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016678.1	875263	876642
GCA_001697985.1	GCA_001697985.1_01614	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016678.1	1639150	1640055
GCA_001697985.1	GCA_001697985.1_01741	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016678.1	1775265	1776503
GCA_001697985.1	GCA_001697985.1_01742	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016678.1	1776911	1777543
GCA_001697985.1	GCA_001697985.1_01744	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016678.1	1778368	1779936
GCA_001697985.1	GCA_001697985.1_01932	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016678.1	1982042	1983568
GCA_015262355.1	GCA_015262355.1_00657	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	98.65	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZSY010000001.1	144149	145339
GCA_015262355.1	GCA_015262355.1_02212	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JABZSY010000091.1	633	2558
GCA_000017005.1	GCA_000017005.1_00373	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP000725.1	398290	400185
GCA_001813295.1	GCA_001813295.1_00252	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	KV812007.1	5498	6235
GCA_001813295.1	GCA_001813295.1_00253	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV812007.1	7342	9261
GCA_001813295.1	GCA_001813295.1_00878	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KV812016.1	353666	354094
GCA_001813295.1	GCA_001813295.1_01636	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	KV812036.1	21074	22798
GCA_001813295.1	GCA_001813295.1_01637	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.84	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	KV812036.1	22800	24536
GCA_000466265.1	GCA_000466265.1_01990	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KE952286.1	2589	4508
GCA_024104495.1	GCA_024104495.1_00725	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHAVJ010000001.1	184760	185179
GCA_024104495.1	GCA_024104495.1_01379	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHAVJ010000024.1	2727	4733
GCA_024104495.1	GCA_024104495.1_01950	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHAVJ010000004.1	163493	164785
GCA_024104495.1	GCA_024104495.1_01957	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHAVJ010000005.1	984	2057
GCA_016642415.1	GCA_016642415.1_01289	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	MRXY01000010.1	26873	27301
GCA_000763245.3	GCA_000763245.3_00439	mexA	multidrug efflux RND transporter periplasmic adaptor subunit MexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	383	383	100.00	100.00	383	AAA74436.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	NF033834.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	CP021380.2	471028	472179
GCA_000763245.3	GCA_000763245.3_00866	aph(3)-IIb	aminoglycoside O-phosphotransferase APH(3)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	268	268	100.00	100.00	268	WP_003113011.1	aminoglycoside O-phosphotransferase APH(3)-IIb	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP021380.2	912709	913515
GCA_000763245.3	GCA_000763245.3_00875	blaPDC-5	extended-spectrum class C beta-lactamase PDC-5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	397	397	100.00	100.00	397	WP_003119095.1	extended-spectrum class C beta-lactamase PDC-5	NF000422.6	PDC family class C beta-lactamase	CP021380.2	925871	927064
GCA_000763245.3	GCA_000763245.3_02555	blaOXA-56	OXA-10 family extended-spectrum class D beta-lactamase OXA-56	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	266	266	100.00	100.00	266	WP_063864264.1	OXA-10 family extended-spectrum class D beta-lactamase OXA-56	NF000386.2	OXA-10 family class D beta-lactamase	CP021380.2	2672338	2673138
GCA_000763245.3	GCA_000763245.3_02556	aadA7	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA7	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	265	265	100.00	100.00	265	WP_010794258.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA7	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP021380.2	2673200	2673997
GCA_000763245.3	GCA_000763245.3_02558	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	293	293	100.00	100.00	293	WP_019727244.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP021380.2	2675877	2676758
GCA_000763245.3	GCA_000763245.3_02561	rmtD1	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtD1	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ALLELEP	247	247	100.00	100.00	247	WP_019726361.1	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtD1	NF000007.1	RmtD family 16S rRNA (guanine(1405)-N(7))-methyltransferase	CP021380.2	2678988	2679731
GCA_000763245.3	GCA_000763245.3_02566	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP021380.2	2684735	2685574
GCA_000763245.3	GCA_000763245.3_02568	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	386	391	100.00	98.72	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP021380.2	2686709	2687869
GCA_000763245.3	GCA_000763245.3_02864	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	395	395	100.00	99.75	395	WP_031633255.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP021380.2	2960283	2961470
GCA_000763245.3	GCA_000763245.3_02868	blaSPM-1	subclass B1 metallo-beta-lactamase SPM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	276	276	100.00	100.00	276	WP_063864747.1	subclass B1 metallo-beta-lactamase SPM-1	NF012150.3	SPM family subclass B1 metallo-beta-lactamase	CP021380.2	2965545	2966375
GCA_000763245.3	GCA_000763245.3_02874	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	395	395	100.00	99.75	395	WP_031633255.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP021380.2	2970583	2971770
GCA_000763245.3	GCA_000763245.3_02878	blaSPM-1	subclass B1 metallo-beta-lactamase SPM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	276	276	100.00	100.00	276	WP_063864747.1	subclass B1 metallo-beta-lactamase SPM-1	NF012150.3	SPM family subclass B1 metallo-beta-lactamase	CP021380.2	2975845	2976675
GCA_000763245.3	GCA_000763245.3_02884	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	395	395	100.00	99.75	395	WP_031633255.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP021380.2	2980883	2982070
GCA_000763245.3	GCA_000763245.3_02919	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	414	414	100.00	99.52	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP021380.2	3015448	3016692
GCA_000763245.3	GCA_000763245.3_03466	mexX	multidrug efflux RND transporter periplasmic adaptor subunit MexX	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	396	396	100.00	99.24	396	AAF14522.1	multidrug efflux RND transporter periplasmic adaptor subunit MexX	NA	NA	CP021380.2	3662210	3663400
GCA_000763245.3	GCA_000763245.3_04458	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	135	135	100.00	100.00	135	WP_003082280.1	FosA family fosfomycin resistance glutathione transferase	NF000094.1	FosA family fosfomycin resistance glutathione transferase	CP021380.2	4699406	4699813
GCA_000763245.3	GCA_000763245.3_04946	catB7	type B-4 chloramphenicol O-acetyltransferase CatB7	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	212	212	100.00	99.06	212	WP_003112709.1	type B-4 chloramphenicol O-acetyltransferase CatB7	NF000490.1	type B chloramphenicol O-acetyltransferase	CP021380.2	5179443	5180081
GCA_000763245.3	GCA_000763245.3_06421	blaOXA-494	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-494	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	262	262	100.00	100.00	262	WP_003118452.1	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-494	NF000432.2	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase	CP021380.2	6763841	6764629
GCA_002087075.1	GCA_002087075.1_00311	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	MWSM01000007.1	127702	128919
GCA_002087075.1	GCA_002087075.1_00312	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	MWSM01000007.1	128940	130403
GCA_002087075.1	GCA_002087075.1_00349	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	MWSM01000007.1	161217	163136
GCA_002087075.1	GCA_002087075.1_01481	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	MWSM01000032.1	10909	12330
GCA_002862065.1	GCA_002862065.1_00646	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	282	405	68.40	100.00	277	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NA	NA	PKJN01000001.1	852154	853002
GCA_002862065.1	GCA_002862065.1_00647	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	PKJN01000001.1	853122	854585
GCA_002862065.1	GCA_002862065.1_00675	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	PKJN01000001.1	879527	881005
GCA_002906615.1	GCA_002906615.1_00069	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP025396.1	67843	69132
GCA_002906615.1	GCA_002906615.1_00072	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP025396.1	70429	72435
GCA_002906615.1	GCA_002906615.1_00094	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP025396.1	88208	88609
GCA_002906615.1	GCA_002906615.1_00095	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP025396.1	88627	89919
GCA_002906615.1	GCA_002906615.1_00179	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP025396.1	164748	166040
GCA_002906615.1	GCA_002906615.1_01221	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP025396.1	1183549	1184046
GCA_002906615.1	GCA_002906615.1_01713	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP025396.1	1677139	1678578
GCA_002906615.1	GCA_002906615.1_02306	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP025396.1	2265838	2267277
GCA_002906615.1	GCA_002906615.1_02310	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP025396.1	2270836	2272302
GCA_002906615.1	GCA_002906615.1_02311	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP025396.1	2272401	2273300
GCA_002906615.1	GCA_002906615.1_02313	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP025396.1	2274599	2275159
GCA_002906615.1	GCA_002906615.1_02314	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP025396.1	2275343	2276887
GCA_002906615.1	GCA_002906615.1_02535	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP025396.1	2502854	2503648
GCA_002906615.1	GCA_002906615.1_02536	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP025396.1	2503741	2504283
GCA_002906615.1	GCA_002906615.1_02541	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	CP025396.1	2507909	2508232
GCA_002906615.1	GCA_002906615.1_02543	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP025396.1	2509478	2510323
GCA_002906615.1	GCA_002906615.1_02544	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP025396.1	2510430	2512187
GCA_002906615.1	GCA_002906615.1_02545	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP025396.1	2512177	2512557
GCA_030219185.1	GCA_030219185.1_00129	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASORL010000011.1	77096	77506
GCA_030219185.1	GCA_030219185.1_01864	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASORL010000047.1	247	1101
GCA_030219185.1	GCA_030219185.1_02278	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASORL010000008.1	39321	39722
GCA_003490865.1	GCA_003490865.1_01010	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.14	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQGI01000004.1	51889	53283
GCA_003490865.1	GCA_003490865.1_01693	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	123	100.00	44.12	136	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	QQGI01000010.1	20353	20775
GCA_024787025.1	GCA_024787025.1_01225	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUSI010000001.1	1458293	1460218
GCA_024787025.1	GCA_024787025.1_02492	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.33	76.12	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JANUSI010000001.1	3106094	3106975
GCA_024787025.1	GCA_024787025.1_02813	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANUSI010000001.1	3439341	3439667
GCA_024787025.1	GCA_024787025.1_03707	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	45.63	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANUSI010000001.1	4560541	4560867
GCA_024787025.1	GCA_024787025.1_03946	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	443	443	100.00	100.00	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	JANUSI010000001.1	4825141	4826472
GCA_013277285.1	GCA_013277285.1_01200	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMMR01000042.1	25873	27006
GCA_029338415.1	GCA_029338415.1_02026	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP120206.1	2274543	2275967
GCA_002966615.1	GCA_002966615.1_01371	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.63	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP020008.1	1358262	1359656
GCA_900490805.1	GCA_900490805.1_01071	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_004632336.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	UENE01000012.1	12127	14046
GCA_900490805.1	GCA_900490805.1_01863	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	UENE01000005.1	171845	172582
GCA_024294725.1	GCA_024294725.1_00205	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOM010000001.1	191440	191868
GCA_024294725.1	GCA_024294725.1_00210	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOM010000001.1	193609	195072
GCA_024294725.1	GCA_024294725.1_00211	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOM010000001.1	195192	196409
GCA_024294725.1	GCA_024294725.1_01123	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCOM010000003.1	302711	304606
GCA_024294725.1	GCA_024294725.1_01276	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCOM010000004.1	111454	113178
GCA_024294725.1	GCA_024294725.1_01277	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCOM010000004.1	113180	114916
GCA_024294725.1	GCA_024294725.1_01594	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCOM010000005.1	180663	182582
GCA_002780495.1	GCA_002780495.1_00786	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	294	399	72.68	97.59	290	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	PDEO01000009.1	21505	22389
GCA_002780495.1	GCA_002780495.1_00980	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	PDEO01000012.1	45711	46448
GCA_002780495.1	GCA_002780495.1_00981	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	561	639	87.79	99.47	561	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	PDEO01000012.1	47555	49240
GCA_000800335.1	GCA_000800335.1_00358	vip	cell invasion LPXTG protein Vip	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	418	399	100.00	83.01	418	AEO24620.1	cell invasion LPXTG protein Vip	NF033201.1	cell invasion LPXTG protein Vip	CP009897.1	357441	358697
GCA_000800335.1	GCA_000800335.1_00370	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1775	1778	100.00	93.70	1778	AEO24631.1	class 1 internalin InlI	NA	NA	CP009897.1	375027	380354
GCA_000800335.1	GCA_000800335.1_00492	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	36.55	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA	CP009897.1	483753	486155
GCA_000800335.1	GCA_000800335.1_00493	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	93.81	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA	CP009897.1	486240	488132
GCA_000800335.1	GCA_000800335.1_00496	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	93.17	205	AEO24735.1	nuclear targeted protein LntA	NA	NA	CP009897.1	489832	490449
GCA_000800335.1	GCA_000800335.1_00564	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	609	605	100.00	94.14	614	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA	CP009897.1	554926	556755
GCA_000800335.1	GCA_000800335.1_00978	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	97.90	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP009897.1	956068	957639
GCA_000800335.1	GCA_000800335.1_01351	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	608	598	100.00	90.62	608	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK	CP009897.1	1295674	1297500
GCA_000800335.1	GCA_000800335.1_01806	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	133	133	100.00	100.00	133	WP_003726635.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP009897.1	1745820	1746221
GCA_000800335.1	GCA_000800335.1_01895	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	96.62	296	AHJ03495.1	class 3 internalin InlC	NA	NA	CP009897.1	1839307	1840200
GCA_000800335.1	GCA_000800335.1_02567	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	383	388	98.71	95.04	383	AEO26812.1	class 3 internalin InlP	NA	NA	CP009897.1	2498363	2499514
GCA_938020355.1	GCA_938020355.1_01759	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CALIID010000101.1	168963	170159
GCA_020297555.1	GCA_020297555.1_00583	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	77.24	51.58	95	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAIWZG010000002.1	611248	611613
GCA_020297555.1	GCA_020297555.1_01366	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAIWZG010000002.1	1378640	1380559
GCA_026427455.1	GCA_026427455.1_01507	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084434.1	1490649	1491941
GCA_026427455.1	GCA_026427455.1_01664	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP084434.1	1672143	1674149
GCA_026427455.1	GCA_026427455.1_01690	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP084434.1	1694603	1695676
GCA_026427455.1	GCA_026427455.1_02255	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP084434.1	2253676	2254095
GCA_016834535.1	GCA_016834535.1_02134	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP069240.1	2283242	2283652
GCA_019552085.1	GCA_019552085.1_02251	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	269	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP071097.1	2352325	2353134
GCA_019552085.1	GCA_019552085.1_02252	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP071097.1	2354033	2355952
GCA_000600355.1	GCA_000600355.1_00260	tet(T)	tetracycline resistance ribosomal protection protein Tet(T)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	561	651	86.18	99.47	561	WP_063856412.1	tetracycline resistance ribosomal protection protein Tet(T)	NF012153.1	tetracycline resistance ribosomal protection protein	AOJP01000001.1	292926	294611
GCA_013010365.1	GCA_013010365.1_02308	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	308	300	98.00	51.18	297	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP046428.1	2745106	2746032
GCA_013010365.1	GCA_013010365.1_04597	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP046428.1	5386266	5388191
GCA_009717065.1	GCA_009717065.1_00293	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMXW01000017.1	825	2042
GCA_009717065.1	GCA_009717065.1_00294	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMXW01000017.1	2162	3625
GCA_009717065.1	GCA_009717065.1_01699	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMXW01000005.1	232174	232602
GCA_018363815.1	GCA_018363815.1_00300	aadA16	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA16	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	281	281	100.00	100.00	281	WP_001749984.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA16	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	JAGZND010000024.1	104	949
GCA_912422195.1	GCA_912422195.1_00273	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAJVVH010000004.1	59664	60854
GCA_030515795.1	GCA_030515795.1_02275	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP100369.1	2473762	2474613
GCA_030515795.1	GCA_030515795.1_02285	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.42	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100369.1	2482493	2483347
GCA_030515795.1	GCA_030515795.1_02292	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP100369.1	2492128	2493303
GCA_003691655.1	GCA_003691655.1_00694	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.14	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP033167.1	701101	702495
GCA_005890625.1	GCA_005890625.1_00116	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.49	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQV01000103.1	81	1502
GCA_003605975.1	GCA_003605975.1_00995	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	QXZZ01000014.1	4091	4906
GCA_030408875.1	GCA_030408875.1_00836	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.10	44.80	471	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP047454.1	898259	899680
GCA_030408875.1	GCA_030408875.1_02137	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP047454.1	2291672	2292526
GCA_963394845.1	GCA_963394845.1_00263	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJPO010000002.1	126792	127697
GCA_963394845.1	GCA_963394845.1_00683	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPO010000006.1	67215	68453
GCA_963394845.1	GCA_963394845.1_00684	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	96.67	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJPO010000006.1	68700	69332
GCA_963394845.1	GCA_963394845.1_00686	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CAUJPO010000006.1	70124	71692
GCA_963394845.1	GCA_963394845.1_01201	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPO010000014.1	14531	16057
GCA_001483775.1	GCA_001483775.1_00636	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	394	391	97.95	67.97	384	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	LQBJ01000011.1	31261	32445
GCA_031296455.1	GCA_031296455.1_02636	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.10	46.40	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPET010000028.1	5294	6718
GCA_900169325.1	GCA_900169325.1_01074	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	85.98	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	FZRL01000007.1	76210	77688
GCA_015552485.1	GCA_015552485.1_00374	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JADNEU010000001.1	301631	303355
GCA_015552485.1	GCA_015552485.1_00375	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.84	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JADNEU010000001.1	303357	305093
GCA_015552485.1	GCA_015552485.1_01360	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADNEU010000004.1	10601	11818
GCA_015552485.1	GCA_015552485.1_01361	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADNEU010000004.1	11938	13401
GCA_001281025.1	GCA_001281025.1_01284	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP012646.1	1305704	1306132
GCA_001281025.1	GCA_001281025.1_01421	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP012646.1	1450462	1451661
GCA_001813895.1	GCA_001813895.1_01857	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV814378.1	378268	379908
GCA_030439925.1	GCA_030439925.1_00376	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQFJD010000001.1	376457	377920
GCA_030439925.1	GCA_030439925.1_00377	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQFJD010000001.1	378040	379257
GCA_002763845.1	GCA_002763845.1_00923	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP024729.1	1068138	1069103
GCA_002763845.1	GCA_002763845.1_00928	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP024729.1	1073249	1075174
GCA_002763845.1	GCA_002763845.1_01057	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	208	212	96.70	60.49	205	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP024729.1	1220051	1220677
GCA_003492845.1	GCA_003492845.1_01367	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQLN01000005.1	136055	136960
GCA_003492845.1	GCA_003492845.1_01771	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQLN01000009.1	19569	20432
GCA_003492845.1	GCA_003492845.1_01772	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.39	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQLN01000009.1	20449	21687
GCA_003492845.1	GCA_003492845.1_01887	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQLN01000011.1	14676	16202
GCA_000212815.1	GCA_000212815.1_01033	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GL890985.1	1012345	1014240
GCA_902373605.1	GCA_902373605.1_00928	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	249	93.57	46.19	236	WP_197749418.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	CABKMQ010000003.1	114322	115098
GCA_007814825.1	GCA_007814825.1_00068	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	98.86	53.60	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP031280.1	70810	71877
GCA_007814825.1	GCA_007814825.1_00412	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP031280.1	446406	447698
GCA_007814825.1	GCA_007814825.1_00885	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP031280.1	890234	891079
GCA_007814825.1	GCA_007814825.1_00886	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP031280.1	891186	892943
GCA_007814825.1	GCA_007814825.1_00887	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP031280.1	892933	893313
GCA_007814825.1	GCA_007814825.1_01915	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP031280.1	1917599	1918018
GCA_007814825.1	GCA_007814825.1_02508	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.20	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP031281.1	39996	41285
GCA_007814825.1	GCA_007814825.1_02509	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	129	131	85.50	97.32	112	AAA27589.1	thioredoxin-dependent arsenate reductase	NA	NA	CP031281.1	41357	41746
GCA_007814825.1	GCA_007814825.1_02574	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP031281.1	95818	97107
GCA_937920795.1	GCA_937920795.1_00260	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.85	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CALETT010000006.1	23846	24256
GCA_030232045.1	GCA_030232045.1_01852	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPFY010000006.1	821	1675
GCA_000615205.1	GCA_000615205.1_00895	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	111	107	96.26	54.29	105	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BALS01000046.1	7535	7870
GCA_002848085.1	GCA_002848085.1_00672	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	PKIH01000001.1	659030	659761
GCA_902460365.1	GCA_902460365.1_00276	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABPTR010000001.1	260992	262911
GCA_902460365.1	GCA_902460365.1_00287	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CABPTR010000001.1	272826	273563
GCA_902460365.1	GCA_902460365.1_00433	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	60.61	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CABPTR010000001.1	423365	423793
GCA_902460365.1	GCA_902460365.1_00838	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABPTR010000001.1	820997	822655
GCA_030176765.1	GCA_030176765.1_00299	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVO010000017.1	248	1102
GCA_030176765.1	GCA_030176765.1_00308	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASNVO010000017.1	8984	9835
GCA_030176765.1	GCA_030176765.1_00313	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASNVO010000019.1	269	1444
GCA_030176765.1	GCA_030176765.1_01979	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.78	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASNVO010000007.1	73606	75048
GCA_022494545.1	GCA_022494545.1_00033	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	547	668	81.89	100.00	547	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000237.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase	CP088157.1	37320	38963
GCA_022494545.1	GCA_022494545.1_00043	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP088157.1	45398	45799
GCA_022494545.1	GCA_022494545.1_00044	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP088157.1	45817	47106
GCA_022494545.1	GCA_022494545.1_00099	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP088157.1	109722	111080
GCA_022494545.1	GCA_022494545.1_00303	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.78	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP088157.1	342768	344123
GCA_022494545.1	GCA_022494545.1_00340	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	203	203	100.00	100.00	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP088157.1	377423	378034
GCA_022494545.1	GCA_022494545.1_01471	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP088157.1	1539450	1540427
GCA_022494545.1	GCA_022494545.1_01472	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP088157.1	1540429	1541367
GCA_022494545.1	GCA_022494545.1_01648	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	269	250	100.00	95.60	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP088157.1	1690105	1690914
GCA_022494545.1	GCA_022494545.1_01817	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP088157.1	1881640	1882932
GCA_022494545.1	GCA_022494545.1_01864	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP088157.1	1921477	1922199
GCA_022494545.1	GCA_022494545.1_01865	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	96.60	235	ABD31004.1	serine protease SplA	NA	NA	CP088157.1	1922324	1923031
GCA_022494545.1	GCA_022494545.1_01871	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP088157.1	1927148	1928131
GCA_022494545.1	GCA_022494545.1_01872	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP088157.1	1928133	1929068
GCA_022494545.1	GCA_022494545.1_02028	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP088157.1	2053473	2053823
GCA_022494545.1	GCA_022494545.1_02033	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP088157.1	2056035	2056526
GCA_022494545.1	GCA_022494545.1_02037	sep	staphylococcal enterotoxin type P	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	260	260	100.00	100.00	260	ADC38120.1	staphylococcal enterotoxin type P	NA	NA	CP088157.1	2058329	2059111
GCA_022494545.1	GCA_022494545.1_02128	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP088157.1	2124102	2124236
GCA_022494545.1	GCA_022494545.1_02271	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP088157.1	2273092	2274534
GCA_022494545.1	GCA_022494545.1_02479	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP088157.1	2462039	2462536
GCA_022494545.1	GCA_022494545.1_02529	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP088157.1	2513042	2514007
GCA_022494545.1	GCA_022494545.1_02530	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP088157.1	2514574	2515521
GCA_022494545.1	GCA_022494545.1_02531	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP088157.1	2515523	2516500
GCA_022494545.1	GCA_022494545.1_02752	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP088157.1	2754862	2756391
GCA_022494545.1	GCA_022494545.1_02786	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	274	350	78.00	100.00	273	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP088157.1	2799683	2800507
GCA_024759125.1	GCA_024759125.1_01114	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103098.1	1377443	1379368
GCA_024759125.1	GCA_024759125.1_02583	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.56	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103098.1	3273427	3274308
GCA_024759125.1	GCA_024759125.1_04543	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.33	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103098.1	5412341	5413672
GCA_001837295.1	GCA_001837295.1_01172	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV832006.1	4310	5968
GCA_001837295.1	GCA_001837295.1_01860	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	639	100.00	98.12	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV832007.1	6911	8833
GCA_001837295.1	GCA_001837295.1_01863	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.24	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV832007.1	10849	11703
GCA_900635435.1	GCA_900635435.1_00104	ampC-Kaer	AmpC-Kaer family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	386	381	100.00	98.69	381	WP_063406924.1	extended-spectrum class C beta-lactamase AmpC-Kaer-1	NF041662.1	AmpC-Kaer family extended-spectrum class C beta-lactamase	LR134121.1	97587	98747
GCA_900635435.1	GCA_900635435.1_00302	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	PARTIALP	599	1050	57.05	94.66	599	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NA	NA	LR134123.1	98934	100733
GCA_900635435.1	GCA_900635435.1_02338	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	96.40	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	LR134126.1	376905	377324
GCA_900635435.1	GCA_900635435.1_02873	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	298	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	LR134126.1	883028	883924
GCA_900635435.1	GCA_900635435.1_03829	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.22	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	LR134124.1	104326	105441
GCA_900635435.1	GCA_900635435.1_03830	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1222	1219	100.00	84.38	1223	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	LR134124.1	105488	109156
GCA_900635435.1	GCA_900635435.1_03833	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	724	724	100.00	100.00	724	AEG95593.1	siderophore salmochelin receptor IroN	NA	NA	LR134124.1	111569	113743
GCA_900635435.1	GCA_900635435.1_04914	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	97.56	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	LR134125.1	295419	296651
GCA_900635435.1	GCA_900635435.1_05567	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	144	141	99.29	87.14	140	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	LR134127.1	101520	101954
GCA_900635435.1	GCA_900635435.1_05865	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	96.45	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	LR134132.1	82794	83978
GCA_000759185.1	GCA_000759185.1_00853	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	648	641	99.53	98.90	638	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JRNN01000036.1	36426	38372
GCA_000759185.1	GCA_000759185.1_02231	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JRNN01000088.1	1659	2624
GCA_001808945.1	GCA_001808945.1_00971	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV795071.1	354472	356130
GCA_020911985.1	GCA_020911985.1_00197	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP074585.1	198245	199060
GCA_020911985.1	GCA_020911985.1_00312	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001112624.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	CP074585.1	321869	322657
GCA_020911985.1	GCA_020911985.1_00747	nreB	nickel resistance MFS transporter NreB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	416	416	100.00	98.08	416	ADY84088.1	nickel resistance MFS transporter NreB	NA	NA	CP074585.1	776403	777653
GCA_020911985.1	GCA_020911985.1_01303	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	91.67	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP074585.1	1335454	1335888
GCA_020911985.1	GCA_020911985.1_01305	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP074585.1	1336627	1337052
GCA_020911985.1	GCA_020911985.1_01306	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	96.26	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP074585.1	1337091	1338776
GCA_020911985.1	GCA_020911985.1_01686	abaF	fosfomycin efflux MFS transporter AbaF	plus	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	429	429	100.00	100.00	429	ABO11759.2	fosfomycin efflux MFS transporter AbaF	NA	NA	CP074585.1	1721978	1723267
GCA_020911985.1	GCA_020911985.1_01934	blaOXA-98	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_001021777.1	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	NF000268.2	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase	CP074585.1	1983582	1984406
GCA_020911985.1	GCA_020911985.1_02490	amvA	multidrug efflux MFS transporter AmvA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	492	492	100.00	98.98	492	ACQ82816.1	multidrug efflux MFS transporter AmvA	NA	NA	CP074585.1	2569466	2570944
GCA_020911985.1	GCA_020911985.1_02904	blaADC-158	extended-spectrum class C beta-lactamase ADC-158	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	383	383	100.00	100.00	383	WP_001211227.1	extended-spectrum class C beta-lactamase ADC-158	NF000425.2	ADC family extended-spectrum class C beta-lactamase	CP074585.1	2968365	2969516
GCA_020911985.1	GCA_020911985.1_03091	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	397	397	100.00	100.00	397	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP074585.1	3177975	3179168
GCA_003293675.1	GCA_003293675.1_00309	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP029984.1	338359	339837
GCA_003293675.1	GCA_003293675.1_00331	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP029984.1	357944	359407
GCA_003293675.1	GCA_003293675.1_00333	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	250	405	60.00	100.00	243	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NA	NA	CP029984.1	359993	360745
GCA_030440125.1	GCA_030440125.1_00635	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQFJM010000001.1	237216	238433
GCA_030440125.1	GCA_030440125.1_00636	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQFJM010000001.1	238553	240016
GCA_009717425.1	GCA_009717425.1_00633	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYN01000001.1	481857	483320
GCA_009717425.1	GCA_009717425.1_00634	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYN01000001.1	483440	484657
GCA_900455615.1	GCA_900455615.1_00168	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	49.45	91	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	UGUV01000003.1	108819	109094
GCA_900455615.1	GCA_900455615.1_00574	tbtM	multidrug efflux RND transporter outer membrane channel subunit TbtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	476	476	100.00	98.95	476	AAD15665.1	multidrug efflux RND transporter outer membrane channel subunit TbtM	NA	NA	UGUV01000002.1	44148	45578
GCA_900455615.1	GCA_900455615.1_00575	tbtB	multidrug efflux RND transporter permease subunit TbtB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1046	1046	100.00	94.46	1046	AAD15664.1	multidrug efflux RND transporter permease subunit TbtB	NA	NA	UGUV01000002.1	45575	48715
GCA_002277935.1	GCA_002277935.1_00099	copB	copper/silver-translocating P-type ATPase CopB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	771	745	99.46	80.81	761	AFM70730.1	copper/silver-translocating P-type ATPase CopB	NA	NA	CP022930.1	92859	95174
GCA_002277935.1	GCA_002277935.1_00492	aac(6)-Iih	aminoglycoside N-acetyltransferase AAC(6)-Iih	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ALLELEP	183	183	100.00	100.00	183	WP_005880220.1	aminoglycoside N-acetyltransferase AAC(6)-Iih	NF000165.3	aminoglycoside 6-N-acetyltransferase	CP022930.1	512547	513098
GCA_002277935.1	GCA_002277935.1_01574	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	99.01	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP022930.1	1668606	1670720
GCA_002277935.1	GCA_002277935.1_01651	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	501	500	99.40	80.28	497	WP_002296175.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP022930.1	1754366	1755871
GCA_000210475.1	GCA_000210475.1_00245	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	92.31	143	AAD11743.1	silver-binding protein SilE	NA	NA	FN649414.1	245577	246008
GCA_000210475.1	GCA_000210475.1_00246	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	491	491	100.00	97.35	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	FN649414.1	246259	247734
GCA_000210475.1	GCA_000210475.1_00247	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	FN649414.1	247727	248407
GCA_000210475.1	GCA_000210475.1_00248	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	99.57	461	AAD11746.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	FN649414.1	248597	249982
GCA_000210475.1	GCA_000210475.1_00249	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	98.29	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	FN649414.1	250011	250364
GCA_000210475.1	GCA_000210475.1_00250	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	99.07	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	FN649414.1	250478	251770
GCA_000210475.1	GCA_000210475.1_00251	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.66	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	FN649414.1	251781	254927
GCA_000210475.1	GCA_000210475.1_00253	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	94.24	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	FN649414.1	255581	258028
GCA_000210475.1	GCA_000210475.1_00258	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	PARTIALP	327	605	54.05	100.00	327	CAA58525.1	multicopper oxidase PcoA	NA	NA	FN649414.1	260844	261827
GCA_000210475.1	GCA_000210475.1_00263	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	PARTIALP	243	296	82.09	100.00	243	CAA58526.1	copper-binding protein PcoB	NA	NA	FN649414.1	264699	265430
GCA_000210475.1	GCA_000210475.1_00264	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	FN649414.1	265470	265850
GCA_000210475.1	GCA_000210475.1_00265	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	FN649414.1	265855	266784
GCA_000210475.1	GCA_000210475.1_00266	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	FN649414.1	266839	267519
GCA_000210475.1	GCA_000210475.1_00267	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	FN649414.1	267516	268916
GCA_000210475.1	GCA_000210475.1_00407	fdeC	inverse autotransporter adhesin FdeC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1418	1416	100.00	94.07	1416	ABE05822.1	inverse autotransporter adhesin FdeC	NA	NA	FN649414.1	374594	378850
GCA_000210475.1	GCA_000210475.1_01413	ariR	biofilm/acid-resistance regulator AriR	plus	STRESS	ACID	NA	NA	EXACTP	88	88	100.00	100.00	88	AAC74250.1	biofilm/acid-resistance regulator AriR	NA	NA	FN649414.1	1354698	1354964
GCA_000210475.1	GCA_000210475.1_01814	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	EXACTP	102	102	100.00	100.00	102	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	FN649414.1	1770656	1770964
GCA_000210475.1	GCA_000210475.1_02299	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.50	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	FN649414.1	2224659	2226461
GCA_000210475.1	GCA_000210475.1_02300	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.67	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	FN649414.1	2226448	2228250
GCA_000210475.1	GCA_000210475.1_03597	sslE	lipoprotein metalloprotease SslE	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	1519	1520	100.00	87.84	1521	ADE89421.1	lipoprotein metalloprotease SslE	NF037973.1	lipoprotein metalloprotease SslE	FN649414.1	3498320	3502879
GCA_000210475.1	GCA_000210475.1_03906	acrF	multidrug efflux RND transporter permease subunit AcrF	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1034	1034	100.00	99.81	1034	AAC76298.1	multidrug efflux RND transporter permease subunit AcrF	NA	NA	FN649414.1	3801509	3804613
GCA_000210475.1	GCA_000210475.1_04147	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	BAE77793.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	FN649414.1	4034992	4035345
GCA_000210475.1	GCA_000210475.1_04149	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	94.33	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	FN649414.1	4036701	4037126
GCA_000210475.1	GCA_000210475.1_04386	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	394	394	100.00	100.00	394	BAE77620.1	multidrug efflux MFS transporter EmrD	NA	NA	FN649414.1	4278501	4279685
GCA_000210475.1	GCA_000210475.1_04640	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	FN649414.1	4528976	4529878
GCA_000210475.1	GCA_000210475.1_05012	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	377	377	100.00	98.41	377	WP_063610930.1	extended-spectrum class C beta-lactamase EC-15	NF000185.2	BlaEC family class C beta-lactamase	FN649414.1	4883386	4884519
GCA_000210475.1	GCA_000210475.1_05184	mdtM	multidrug efflux MFS transporter MdtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	419	410	98.29	97.52	403	AAC77293.1	multidrug efflux MFS transporter MdtM	NA	NA	FN649414.1	5047609	5048868
GCA_000210475.1	GCA_000210475.1_05396	ltcA	heat-labile enterotoxin LT subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	218	258	84.50	98.62	218	ABV01310.1	heat-labile enterotoxin LT subunit A	NA	NA	FN649417.1	50594	51250
GCA_000210475.1	GCA_000210475.1_05404	sta1	heat-stable enterotoxin ST-I group a	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	72	72	100.00	100.00	72	CAD87828.1	heat-stable enterotoxin ST-I group a	NA	NA	FN649417.1	57051	57269
GCA_000210475.1	GCA_000210475.1_05416	eatA	serine protease autotransporter toxin EatA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1364	1364	100.00	100.00	1364	AAO17297.1	serine protease autotransporter toxin EatA	NA	NA	FN649418.1	1202	5296
GCA_000210475.1	GCA_000210475.1_05462	cfaC	CFA/I pilus usher protein CfaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	869	869	100.00	100.00	869	CBJ04488.1	CFA/I pilus usher protein CfaC	NA	NA	FN649418.1	39148	41757
GCA_002894165.1	GCA_002894165.1_00009	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	NBAX01000001.1	14310	15275
GCA_002894165.1	GCA_002894165.1_00674	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	NBAX01000013.1	47227	49152
GCA_002894165.1	GCA_002894165.1_00839	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NBAX01000002.1	107525	108325
GCA_030486815.1	GCA_030486815.1_01494	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	91.62	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JAUKFR010000005.1	82443	83984
GCA_015732665.1	GCA_015732665.1_00466	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030821.1	457793	459172
GCA_015732665.1	GCA_015732665.1_01248	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP030821.1	1213986	1214891
GCA_015732665.1	GCA_015732665.1_01380	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030821.1	1350120	1351358
GCA_015732665.1	GCA_015732665.1_01382	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	215	210	74.29	98.72	156	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030821.1	1352849	1353496
GCA_015732665.1	GCA_015732665.1_01384	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030821.1	1354307	1355875
GCA_015732665.1	GCA_015732665.1_01582	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030821.1	1558011	1559537
GCA_001813105.1	GCA_001813105.1_00413	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV811485.1	394463	395680
GCA_001813105.1	GCA_001813105.1_00414	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV811485.1	395800	397263
GCA_001813105.1	GCA_001813105.1_01212	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.88	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	KV811501.1	57070	58806
GCA_001813105.1	GCA_001813105.1_01213	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	KV811501.1	58808	60532
GCA_009378035.1	GCA_009378035.1_01382	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCB01000027.1	108545	109486
GCA_021513115.1	GCA_021513115.1_00051	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP090993.1	56694	57983
GCA_021513115.1	GCA_021513115.1_00054	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP090993.1	60160	60507
GCA_021513115.1	GCA_021513115.1_00127	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	98.59	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP090993.1	141674	142102
GCA_021513115.1	GCA_021513115.1_00857	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP090993.1	882595	883440
GCA_021513115.1	GCA_021513115.1_00858	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP090993.1	883547	885304
GCA_021513115.1	GCA_021513115.1_00859	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP090993.1	885294	885674
GCA_021513115.1	GCA_021513115.1_02467	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP090995.1	16757	17500
GCA_021513115.1	GCA_021513115.1_02468	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP090995.1	17723	18121
GCA_021513115.1	GCA_021513115.1_02472	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP090995.1	21129	21974
GCA_021513115.1	GCA_021513115.1_02473	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP090995.1	22081	23838
GCA_021513115.1	GCA_021513115.1_02474	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP090995.1	23828	24208
GCA_021513115.1	GCA_021513115.1_02477	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP090995.1	26009	27475
GCA_016623665.1	GCA_016623665.1_00033	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JAEKFX010000016.1	1566	2300
GCA_016623665.1	GCA_016623665.1_00036	catA	type A-7 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	215	215	100.00	100.00	215	WP_002331392.1	type A-7 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JAEKFX010000017.1	2283	2930
GCA_016623665.1	GCA_016623665.1_00821	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAEKFX010000012.1	744177	745817
GCA_016623665.1	GCA_016623665.1_00913	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAEKFX010000012.1	837921	839927
GCA_016623665.1	GCA_016623665.1_00914	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JAEKFX010000012.1	840027	841784
GCA_016623665.1	GCA_016623665.1_00915	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JAEKFX010000012.1	841784	842155
GCA_016623665.1	GCA_016623665.1_01008	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.40	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAEKFX010000012.1	934134	935426
GCA_016623665.1	GCA_016623665.1_01060	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.96	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAEKFX010000012.1	980134	981777
GCA_016623665.1	GCA_016623665.1_01071	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAEKFX010000012.1	988090	988935
GCA_016623665.1	GCA_016623665.1_01072	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAEKFX010000012.1	989042	990799
GCA_016623665.1	GCA_016623665.1_01073	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAEKFX010000012.1	990789	991169
GCA_016623665.1	GCA_016623665.1_01078	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAEKFX010000012.1	995205	995765
GCA_016623665.1	GCA_016623665.1_01079	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.22	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAEKFX010000012.1	995949	997493
GCA_016623665.1	GCA_016623665.1_01481	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAEKFX010000001.1	416204	416584
GCA_016623665.1	GCA_016623665.1_01482	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAEKFX010000001.1	416574	418331
GCA_016623665.1	GCA_016623665.1_01483	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAEKFX010000001.1	418438	419283
GCA_016623665.1	GCA_016623665.1_02555	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAEKFX010000015.1	38359	39798
GCA_016623665.1	GCA_016623665.1_02561	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAEKFX010000015.1	43041	43835
GCA_016623665.1	GCA_016623665.1_02563	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	199	302	65.89	99.50	199	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	NA	JAEKFX010000015.1	44591	45190
GCA_016623665.1	GCA_016623665.1_02781	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAEKFX010000005.1	5555	7312
GCA_016623665.1	GCA_016623665.1_02782	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAEKFX010000005.1	7419	8264
GCA_016623665.1	GCA_016623665.1_02798	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	320	585	54.70	100.00	320	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	JAEKFX010000005.1	18396	19358
GCA_016623665.1	GCA_016623665.1_02889	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAEKFX010000007.1	5358	5738
GCA_016623665.1	GCA_016623665.1_02890	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAEKFX010000007.1	5728	7485
GCA_016623665.1	GCA_016623665.1_02891	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAEKFX010000007.1	7592	8437
GCA_026057735.1	GCA_026057735.1_00112	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.29	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP110418.1	157691	159331
GCA_026057735.1	GCA_026057735.1_00721	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	CP110418.1	805130	805624
GCA_026057735.1	GCA_026057735.1_01203	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	PARTIALP	291	492	58.33	91.64	287	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NA	NA	CP110418.1	1293692	1294567
GCA_030175955.1	GCA_030175955.1_00413	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUV010000018.1	12697	13551
GCA_003625775.1	GCA_003625775.1_01397	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHW01000005.1	102977	103918
GCA_958437735.1	GCA_958437735.1_00791	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	94.37	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAUBPD010000028.1	7765	8619
GCA_029623715.1	GCA_029623715.1_00791	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP121105.1	728130	729524
GCA_029623715.1	GCA_029623715.1_01104	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP121105.1	1058617	1059834
GCA_029623715.1	GCA_029623715.1_01105	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP121105.1	1059954	1061417
GCA_029623715.1	GCA_029623715.1_01121	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP121105.1	1070478	1071338
GCA_000742895.1	GCA_000742895.1_00124	inhA1	M6 family metalloprotease immune inhibitor InhA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	795	796	100.00	96.61	796	ADH05944.1	M6 family metalloprotease immune inhibitor InhA1	NA	NA	CP007666.1	113278	115665
GCA_000742895.1	GCA_000742895.1_00424	mphL	macrolide 2-phosphotransferase MphL	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	298	303	98.02	87.21	297	WP_002047670.1	macrolide 2-phosphotransferase MphL	NF038057.1	macrolide 2-phosphotransferase MphL	CP007666.1	368022	368918
GCA_000742895.1	GCA_000742895.1_00724	nheA	non-hemolytic enterotoxin NHE subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	386	386	100.00	97.93	386	AAS40892.1	non-hemolytic enterotoxin NHE subunit A	NA	NA	CP007666.1	643544	644704
GCA_000742895.1	GCA_000742895.1_00725	nheB	non-hemolytic enterotoxin NHE subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	402	402	100.00	98.51	402	AAS40893.1	non-hemolytic enterotoxin NHE subunit B	NA	NA	CP007666.1	644736	645944
GCA_000742895.1	GCA_000742895.1_00788	entFM	enterotoxin EntFM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	420	421	100.00	98.81	421	AFH83235.1	enterotoxin EntFM	NF040678.1	enterotoxin EntFM	CP007666.1	710936	712198
GCA_000742895.1	GCA_000742895.1_00876	fosB	FosBx1 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	138	100.00	89.13	138	WP_000943772.1	FosBx1 family fosfomycin resistance bacillithiol transferase	NF041541.1	FosBx1 family fosfomycin resistance bacillithiol transferase	CP007666.1	789271	789687
GCA_000742895.1	GCA_000742895.1_01235	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	219	98.63	57.87	216	WP_087344902.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP007666.1	1119726	1120376
GCA_000742895.1	GCA_000742895.1_01324	bla	class A beta-lactamase Bla1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	306	309	99.03	99.67	306	WP_011053164.1	class A beta-lactamase Bla1	NF033096.1	class A beta-lactamase Bla1	CP007666.1	1201355	1202275
GCA_000742895.1	GCA_000742895.1_01349	hlyII	hemolysin II HlyII	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	240	412	58.25	96.25	240	AAP10457.1	hemolysin II HlyII	NA	NA	CP007666.1	1225858	1226580
GCA_000742895.1	GCA_000742895.1_01350	hlyIIR	hemolysin II regulator HlyIIR	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	201	201	100.00	99.50	201	AAO74585.1	hemolysin II regulator HlyIIR	NA	NA	CP007666.1	1227111	1227716
GCA_000742895.1	GCA_000742895.1_01351	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	82.52	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP007666.1	1227858	1229336
GCA_000742895.1	GCA_000742895.1_01452	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	210	210	98.10	66.67	207	WP_071218948.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP007666.1	1320690	1321322
GCA_000742895.1	GCA_000742895.1_01985	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	184	184	100.00	100.00	184	WP_000054744.1	streptothricin N-acetyltransferase SatA	NA	NA	CP007666.1	1806589	1807143
GCA_000742895.1	GCA_000742895.1_02138	alo	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	512	512	100.00	99.80	512	AAP27127.1	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	NA	NA	CP007666.1	1959549	1961087
GCA_000742895.1	GCA_000742895.1_02280	bla2	BcII family subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	EXACTP	256	256	100.00	100.00	256	WP_000799223.1	BcII family subclass B1 metallo-beta-lactamase	NF033095.1	BcII family subclass B1 metallo-beta-lactamase	CP007666.1	2090085	2090855
GCA_000742895.1	GCA_000742895.1_02648	plcA	phosphatidylinositol diacylglycerol-lyase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	329	329	100.00	100.00	329	AAP27624.1	phosphatidylinositol diacylglycerol-lyase	NA	NA	CP007666.1	2430904	2431893
GCA_000742895.1	GCA_000742895.1_02866	fosB2	fosfomycin resistance bacillithiol transferase FosB2	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_000938987.1	fosfomycin resistance bacillithiol transferase FosB2	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP007666.1	2651463	2651882
GCA_000742895.1	GCA_000742895.1_04341	plcR	transcriptional regulator PlcR	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	213	285	74.74	98.12	213	AAT61178.1	transcriptional regulator PlcR	NA	NA	CP007666.1	3955581	3956222
GCA_000742895.1	GCA_000742895.1_05238	inhA2	M6 family metalloprotease immune inhibitor InhA2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	799	799	100.00	100.00	799	AAP24685.1	M6 family metalloprotease immune inhibitor InhA2	NA	NA	CP007666.1	4791343	4793742
GCA_000742895.1	GCA_000742895.1_05243	cerA	phospholipase CerA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	283	100.00	98.59	283	AAS39677.1	phospholipase CerA	NA	NA	CP007666.1	4797607	4798458
GCA_000742895.1	GCA_000742895.1_05244	sph	sphingomyelinase C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	333	338	98.52	99.70	333	AAP24691.1	sphingomyelinase C	NA	NA	CP007666.1	4798532	4799533
GCA_000742895.1	GCA_000742895.1_05767	capB	capsule biosynthesis protein CapB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	464	464	100.00	100.00	464	AAF13663.1	capsule biosynthesis protein CapB	NA	NA	CP007664.1	47243	48637
GCA_000742895.1	GCA_000742895.1_05768	capC	capsular polyglutamate amide ligase/translocase CapC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	149	149	100.00	100.00	149	AAM26221.1	capsular polyglutamate amide ligase/translocase CapC	NA	NA	CP007664.1	48652	49101
GCA_000742895.1	GCA_000742895.1_05769	capA	capsular polyglutamate synthetase CapA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	411	411	100.00	100.00	411	AAM26220.1	capsular polyglutamate synthetase CapA	NA	NA	CP007664.1	49113	50348
GCA_000742895.1	GCA_000742895.1_05770	capD	capsule biosynthesis gamma-glutamyltransferase CapD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	528	528	100.00	100.00	528	AAM26219.1	capsule biosynthesis gamma-glutamyltransferase CapD	NA	NA	CP007664.1	50345	51931
GCA_000742895.1	GCA_000742895.1_05771	capE	capsule biosynthesis protein CapE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	47	47	100.00	100.00	47	AAF13659.1	capsule biosynthesis protein CapE	NA	NA	CP007664.1	51946	52089
GCA_000742895.1	GCA_000742895.1_05876	lef	anthrax toxin lethal factor	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	809	809	100.00	100.00	809	AAM26117.1	anthrax toxin lethal factor	NA	NA	CP007665.1	50086	52515
GCA_000742895.1	GCA_000742895.1_05881	pagA	anthrax toxin protective antigen	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	764	764	100.00	99.74	764	AAD32414.1	anthrax toxin protective antigen	NA	NA	CP007665.1	55808	58102
GCA_000742895.1	GCA_000742895.1_05891	atxA	anthrax toxin expression trans-acting transcriptional regulator AtxA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	475	475	100.00	100.00	475	AAD32423.1	anthrax toxin expression trans-acting transcriptional regulator AtxA	NA	NA	CP007665.1	72682	74109
GCA_000742895.1	GCA_000742895.1_05896	cya	anthrax toxin edema factor	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	800	800	100.00	99.88	800	AJG68144.1	anthrax toxin edema factor	NA	NA	CP007665.1	76864	79266
GCA_000742895.1	GCA_000742895.1_05910	hasA	hyaluronan synthase HasA	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	366	427	85.71	99.73	366	KHA45933.1	hyaluronan synthase HasA	NA	NA	CP007665.1	89418	90518
GCA_001466485.2	GCA_001466485.2_03593	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	305	97.38	54.79	303	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	LLWF02000089.1	10789	11709
GCA_001466485.2	GCA_001466485.2_04229	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	91.53	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	LLWF02000169.1	985	1872
GCA_001466485.2	GCA_001466485.2_04230	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	96.71	304	APX31172.1	heat resistance protein YfdX1	NA	NA	LLWF02000169.1	1975	2889
GCA_902374235.1	GCA_902374235.1_01656	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CABKPN010000001.1	1930795	1931760
GCA_902509505.1	GCA_902509505.1_00059	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	99.69	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	LR735434.1	58219	59205
GCA_902509505.1	GCA_902509505.1_00060	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LR735434.1	59305	61311
GCA_902509505.1	GCA_902509505.1_00079	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR735434.1	79387	80676
GCA_902509505.1	GCA_902509505.1_00082	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LR735434.1	82854	83201
GCA_902509505.1	GCA_902509505.1_00159	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	LR735434.1	165797	166033
GCA_902509505.1	GCA_902509505.1_00212	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	LR735434.1	225105	226172
GCA_902509505.1	GCA_902509505.1_00877	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LR735434.1	902572	903417
GCA_902509505.1	GCA_902509505.1_00878	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LR735434.1	903524	905281
GCA_902509505.1	GCA_902509505.1_00879	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LR735434.1	905271	905651
GCA_902509505.1	GCA_902509505.1_01446	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	LR735434.1	1438653	1439138
GCA_902509505.1	GCA_902509505.1_02503	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	LR735435.1	2327	2944
GCA_902509505.1	GCA_902509505.1_02519	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.59	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	LR735435.1	16077	17543
GCA_902509505.1	GCA_902509505.1_02520	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	LR735435.1	17642	18541
GCA_902509505.1	GCA_902509505.1_02526	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	LR735435.1	23661	24221
GCA_902509505.1	GCA_902509505.1_02527	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	LR735435.1	24405	25949
GCA_014266475.1	GCA_014266475.1_00096	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JACMVP010000002.1	57463	57885
GCA_014266475.1	GCA_014266475.1_00146	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	344	350	96.29	76.26	337	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACMVP010000002.1	117084	118118
GCA_014266475.1	GCA_014266475.1_01163	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVP010000005.1	60411	61700
GCA_014266475.1	GCA_014266475.1_01464	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMVP010000008.1	33690	34037
GCA_014266475.1	GCA_014266475.1_01468	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVP010000008.1	37714	39006
GCA_014266475.1	GCA_014266475.1_01469	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACMVP010000008.1	39023	39418
GCA_024295715.1	GCA_024295715.1_00210	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOS010000001.1	205644	206861
GCA_024295715.1	GCA_024295715.1_00211	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOS010000001.1	206981	208444
GCA_024295715.1	GCA_024295715.1_00216	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOS010000001.1	210185	210613
GCA_024295715.1	GCA_024295715.1_00550	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCOS010000011.1	53116	54852
GCA_024295715.1	GCA_024295715.1_00551	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCOS010000011.1	54854	56578
GCA_024295715.1	GCA_024295715.1_01295	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCOS010000003.1	180663	182582
GCA_024295715.1	GCA_024295715.1_01569	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCOS010000004.1	226534	228429
GCA_000019045.1	GCA_000019045.1_01727	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	538	631	87.48	68.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP000922.1	1432444	1434060
GCA_004365845.1	GCA_004365845.1_01261	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	SODE01000003.1	88805	89152
GCA_004365845.1	GCA_004365845.1_01264	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	SODE01000003.1	91320	92609
GCA_004365845.1	GCA_004365845.1_02160	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	SODE01000012.1	1544	2389
GCA_004365845.1	GCA_004365845.1_02161	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	SODE01000012.1	2496	4253
GCA_004365845.1	GCA_004365845.1_02162	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	SODE01000012.1	4243	4623
GCA_004365845.1	GCA_004365845.1_02165	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	SODE01000012.1	6409	6969
GCA_004365845.1	GCA_004365845.1_02166	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	SODE01000012.1	7153	8697
GCA_004365845.1	GCA_004365845.1_02189	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	SODE01000012.1	27659	28402
GCA_004365845.1	GCA_004365845.1_02190	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	SODE01000012.1	28625	29023
GCA_004365845.1	GCA_004365845.1_02194	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	SODE01000014.1	175	1614
GCA_000192205.1	GCA_000192205.1_01895	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	GL872408.1	1923816	1925735
GCA_026783045.1	GCA_026783045.1_00878	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKUXP010000002.1	218758	219186
GCA_003494285.1	GCA_003494285.1_00212	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQIL01000001.1	253996	255390
GCA_002119785.3	GCA_002119785.3_00014	blaOXA-283	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	276	276	100.00	100.00	276	WP_004647119.1	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	NF000436.2	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	CP019143.2	16554	17384
GCA_002119785.3	GCA_002119785.3_01017	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	97.23	76.68	386	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP019143.2	1006102	1007322
GCA_002119785.3	GCA_002119785.3_03316	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	947	949	100.00	95.68	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP019144.2	54122	56965
GCA_902375045.1	GCA_902375045.1_00200	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABKSM010000001.1	214965	215366
GCA_902375045.1	GCA_902375045.1_00880	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.85	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABKSM010000001.1	950939	951349
GCA_001679075.1	GCA_001679075.1_01110	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	LZDK01000008.1	130841	131782
GCA_001679075.1	GCA_001679075.1_01538	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	72.51	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LZDK01000010.1	237005	238648
GCA_006385805.1	GCA_006385805.1_00638	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	59.85	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	VFSG01000001.1	613085	613513
GCA_006385805.1	GCA_006385805.1_00644	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	VFSG01000001.1	616043	617506
GCA_006385805.1	GCA_006385805.1_00645	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	VFSG01000001.1	617626	618843
GCA_015548525.1	GCA_015548525.1_00076	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JADMXG010000012.1	17361	18206
GCA_015548525.1	GCA_015548525.1_00077	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JADMXG010000012.1	18313	20070
GCA_015548525.1	GCA_015548525.1_00078	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JADMXG010000012.1	20060	20440
GCA_015548525.1	GCA_015548525.1_01746	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JADMXG010000002.1	287363	288655
GCA_000287675.1	GCA_000287675.1_00857	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.50	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	ALJL01000016.1	328471	329949
GCA_000287675.1	GCA_000287675.1_02522	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	ALJL01000036.1	176728	177945
GCA_000287675.1	GCA_000287675.1_02523	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	ALJL01000036.1	178065	179528
GCA_023093855.1	GCA_023093855.1_01308	catA	type A-4 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	217	217	100.00	96.77	217	WP_063843208.1	type A-4 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP095765.1	1376725	1377378
GCA_023093855.1	GCA_023093855.1_03067	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	92.19	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP095765.1	3234997	3235575
GCA_023093855.1	GCA_023093855.1_03071	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	194	194	100.00	100.00	194	AAD47284.1	tellurium resistance-associated protein TerZ	NA	NA	CP095765.1	3238320	3238904
GCA_023093855.1	GCA_023093855.1_03082	tet(J)	tetracycline efflux MFS transporter Tet(J)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	398	398	100.00	99.75	398	WP_004245621.1	tetracycline efflux MFS transporter Tet(J)	NF012194.0	tetracycline efflux MFS transporter Tet(J)	CP095765.1	3248150	3249346
GCA_023093855.1	GCA_023093855.1_03114	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	557	562	99.29	56.71	559	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP095765.1	3282479	3284152
GCA_023093855.1	GCA_023093855.1_03115	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	137	141	93.62	58.33	132	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP095765.1	3284190	3284603
GCA_023093855.1	GCA_023093855.1_03116	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	61.54	91	BAA20336.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP095765.1	3284613	3284888
GCA_023093855.1	GCA_023093855.1_03168	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	287	288	96.88	53.55	282	WP_002153223.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP095765.1	3340495	3341358
GCA_023093855.1	GCA_023093855.1_03172	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP095765.1	3343741	3344556
GCA_023093855.1	GCA_023093855.1_03173	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP095765.1	3344617	3345420
GCA_023093855.1	GCA_023093855.1_03174	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP095765.1	3345420	3346256
GCA_023093855.1	GCA_023093855.1_03176	aph(3)-VIa	aminoglycoside O-phosphotransferase APH(3)-VIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	BLASTP	259	259	100.00	98.46	259	WP_000422636.1	aminoglycoside O-phosphotransferase APH(3)-VIa	NF033062.0	APH(3)-VI family aminoglycoside O-phosphotransferase	CP095765.1	3346661	3347440
GCA_023093855.1	GCA_023093855.1_03177	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	276	278	99.28	100.00	276	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP095765.1	3347758	3348588
GCA_023093855.1	GCA_023093855.1_03179	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	404	404	100.00	100.00	404	WP_000214122.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP095765.1	3349544	3350758
GCA_023093855.1	GCA_023093855.1_03190	tmexC3	multidrug efflux RND transporter periplasmic adaptor subunit TMexC3	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	ALLELEP	387	387	100.00	100.00	387	WP_034039546.1	multidrug efflux RND transporter periplasmic adaptor subunit TMexC3	NA	NA	CP095765.1	3367731	3368894
GCA_023093855.1	GCA_023093855.1_03191	tmexD3	multidrug efflux RND transporter permease subunit TMexD3	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	ALLELEP	1044	1044	100.00	100.00	1044	WP_034065037.1	multidrug efflux RND transporter permease subunit TMexD3	NA	NA	CP095765.1	3368910	3372044
GCA_023093855.1	GCA_023093855.1_03192	toprJ1	multidrug efflux transporter outer membrane subunit TOprJ1	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	ALLELEP	477	477	100.00	100.00	477	WP_003152694.1	multidrug efflux transporter outer membrane subunit TOprJ1	NA	NA	CP095765.1	3372049	3373482
GCA_023093855.1	GCA_023093855.1_03596	fosA3	fosfomycin resistance glutathione transferase FosA3	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	138	138	100.00	100.00	138	WP_014839980.1	fosfomycin resistance glutathione transferase FosA3	NF000075.1	FosA3/FosA4 family fosfomycin resistance glutathione transferase	CP095765.1	3813780	3814196
GCA_023093855.1	GCA_023093855.1_03598	aac(6)-Ib-cr	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr	core	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	BLASTP	199	184	100.00	100.00	184	WP_063840321.1	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr5	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP095765.1	3815385	3815984
GCA_023093855.1	GCA_023093855.1_03599	blaOXA	OXA-1 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	291	276	100.00	100.00	276	WP_001334766.1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NF000388.2	OXA-1 family class D beta-lactamase	CP095765.1	3816070	3816945
GCA_023093855.1	GCA_023093855.1_03600	catB3	type B-3 chloramphenicol O-acetyltransferase CatB3	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	210	210	100.00	100.00	210	WP_000186237.1	type B-3 chloramphenicol O-acetyltransferase CatB3	NF000490.1	type B chloramphenicol O-acetyltransferase	CP095765.1	3817083	3817715
GCA_023093855.1	GCA_023093855.1_03601	arr-3	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	EXACTP	150	150	100.00	100.00	150	WP_001749986.1	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP095765.1	3817800	3818252
GCA_023093855.1	GCA_023093855.1_03602	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP095765.1	3818475	3818822
GCA_023093855.1	GCA_023093855.1_03603	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP095765.1	3818816	3819655
GCA_023093855.1	GCA_023093855.1_03607	blaCTX-M-65	extended-spectrum class A beta-lactamase CTX-M-65	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_013188475.1	extended-spectrum class A beta-lactamase CTX-M-65	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	CP095765.1	3822644	3823519
GCA_023093855.1	GCA_023093855.1_03612	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP095765.1	3827128	3827943
GCA_023093855.1	GCA_023093855.1_03616	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	120	121	100.00	82.64	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP095765.1	3831164	3831526
GCA_023093855.1	GCA_023093855.1_03617	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	564	561	100.00	85.31	565	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP095765.1	3831544	3833238
GCA_023093855.1	GCA_023093855.1_03618	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	140	140	100.00	100.00	140	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP095765.1	3833290	3833712
GCA_023093855.1	GCA_023093855.1_03619	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	90.11	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP095765.1	3833748	3834023
GCA_023093855.1	GCA_023093855.1_03620	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	189	144	100.00	93.75	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP095765.1	3834324	3834893
GCA_023093855.1	GCA_023093855.1_03702	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001206315.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	CP095765.1	3925640	3926428
GCA_023093855.1	GCA_023093855.1_03703	sat2	streptothricin N-acetyltransferase Sat2	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	174	174	100.00	100.00	174	WP_000704156.1	streptothricin N-acetyltransferase Sat2	NF000358.1	streptothricin N-acetyltransferase Sat2	CP095765.1	3926486	3927010
GCA_023093855.1	GCA_023093855.1_03704	dfrA1	trimethoprim-resistant dihydrofolate reductase DfrA1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	157	157	100.00	100.00	157	WP_000777554.1	trimethoprim-resistant dihydrofolate reductase DfrA1	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	CP095765.1	3927105	3927578
GCA_027680525.1	GCA_027680525.1_00907	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	229	232	99.14	66.52	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	JAQDDJ010000001.1	903132	903821
GCA_027680525.1	GCA_027680525.1_02793	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAQDDJ010000004.1	128141	128935
GCA_027680525.1	GCA_027680525.1_02794	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAQDDJ010000004.1	129028	129570
GCA_027680525.1	GCA_027680525.1_02795	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAQDDJ010000004.1	129567	130475
GCA_027680525.1	GCA_027680525.1_02801	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQDDJ010000004.1	132851	133588
GCA_027680525.1	GCA_027680525.1_03521	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	128	121	100.00	47.29	129	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQDDJ010000006.1	46117	46503
GCA_027680525.1	GCA_027680525.1_03562	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAQDDJ010000006.1	92501	94420
GCA_009730295.1	GCA_009730295.1_00323	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP046313.1	322360	323823
GCA_009730295.1	GCA_009730295.1_00324	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP046313.1	323943	325160
GCA_000023905.1	GCA_000023905.1_00850	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	83.94	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP001685.1	905604	907082
GCA_002860865.1	GCA_002860865.1_00758	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	PKIE01000001.1	777544	778743
GCA_002860865.1	GCA_002860865.1_00852	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	PKIE01000001.1	870225	870962
GCA_002860865.1	GCA_002860865.1_00854	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_063856403.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	PKIE01000001.1	872438	874357
GCA_009717245.1	GCA_009717245.1_00401	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYE01000001.1	303123	304340
GCA_009717245.1	GCA_009717245.1_00402	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYE01000001.1	304460	305923
GCA_009717245.1	GCA_009717245.1_00407	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMYE01000001.1	307790	308218
GCA_014931395.1	GCA_014931395.1_01063	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP063120.1	1072067	1073707
GCA_019703735.1	GCA_019703735.1_01627	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.14	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018780.1	1622938	1624332
GCA_000477935.1	GCA_000477935.1_00771	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	KI515715.1	841857	843032
GCA_000477935.1	GCA_000477935.1_00793	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	276	279	98.92	99.64	276	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	KI515715.1	865886	866716
GCA_000477935.1	GCA_000477935.1_00802	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515715.1	874619	875473
GCA_000935585.1	GCA_000935585.1_02130	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	302	97.68	73.83	298	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JXYQ01000004.1	24580	25497
GCA_000935585.1	GCA_000935585.1_02938	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	134	97.76	76.34	131	WP_014714131.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	JXYQ01000059.1	10427	10846
GCA_000935585.1	GCA_000935585.1_03532	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	54.35	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JXYQ01000077.1	1398	1673
GCA_001896065.1	GCA_001896065.1_01098	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP018137.1	1052653	1053081
GCA_001896065.1	GCA_001896065.1_01191	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP018137.1	1132848	1134047
GCA_001896065.1	GCA_001896065.1_01835	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP018137.1	1746142	1746879
GCA_001896065.1	GCA_001896065.1_01846	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP018137.1	1756794	1758713
GCA_001896065.1	GCA_001896065.1_01851	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP018137.1	1760439	1761902
GCA_001896065.1	GCA_001896065.1_01852	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP018137.1	1762022	1763239
GCA_021266585.1	GCA_021266585.1_00789	poxtA	ABC-F type ribosomal protection protein PoxtA	core	AMR	AMR	OXAZOLIDINONE/PHENICOL	CHLORAMPHENICOL/FLORFENICOL/LINEZOLID	BLASTP	541	542	98.71	99.07	535	WP_002415638.1	ABC-F type ribosomal protection protein PoxtA	NA	NA	CP089850.1	725208	726833
GCA_021266585.1	GCA_021266585.1_00796	fexB	chloramphenicol/florfenicol efflux MFS transporter FexB	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	469	469	100.00	99.36	469	WP_002415211.1	chloramphenicol/florfenicol efflux MFS transporter FexB	NF040856.1	chloramphenicol/florfenicol efflux MFS transporter FexB	CP089850.1	732215	733624
GCA_021266585.1	GCA_021266585.1_01938	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	458	458	100.00	98.69	458	WP_002294500.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP089853.1	24198	25574
GCA_021266585.1	GCA_021266585.1_01939	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	639	100.00	99.38	641	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP089853.1	25768	27693
GCA_021266585.1	GCA_021266585.1_01955	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_002294505.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP089851.1	11888	12751
GCA_021266585.1	GCA_021266585.1_01958	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP089851.1	13249	14688
GCA_021266585.1	GCA_021266585.1_02332	fexB	chloramphenicol/florfenicol efflux MFS transporter FexB	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	469	469	100.00	99.36	469	WP_002415211.1	chloramphenicol/florfenicol efflux MFS transporter FexB	NF040856.1	chloramphenicol/florfenicol efflux MFS transporter FexB	CP089852.1	3221	4630
GCA_021266585.1	GCA_021266585.1_02334	poxtA	ABC-F type ribosomal protection protein PoxtA	core	AMR	AMR	OXAZOLIDINONE/PHENICOL	CHLORAMPHENICOL/FLORFENICOL/LINEZOLID	BLASTP	542	542	100.00	99.45	542	WP_002415638.1	ABC-F type ribosomal protection protein PoxtA	NA	NA	CP089852.1	6315	7943
GCA_021266585.1	GCA_021266585.1_02336	vat(E)	streptogramin A O-acetyltransferase Vat(E)	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	EXACTP	214	214	100.00	100.00	214	WP_002328813.1	streptogramin A O-acetyltransferase Vat(E)	NF000020.1	streptogramin A O-acetyltransferase Vat(E)	CP089852.1	9765	10409
GCA_021266585.1	GCA_021266585.1_02339	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	244	244	100.00	99.18	244	WP_032492416.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP089852.1	13066	13800
GCA_011634875.1	GCA_011634875.1_00133	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	100.00	74.77	218	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	SIRQ01000001.1	128416	129069
GCA_011634875.1	GCA_011634875.1_00134	merR2	mercury resistance transcriptional regulator MerR2	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	129	129	99.22	83.59	128	AAD25959.1	mercury resistance transcriptional regulator MerR2	NA	NA	SIRQ01000001.1	129202	129591
GCA_011634875.1	GCA_011634875.1_00136	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	547	98.35	73.47	539	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	SIRQ01000001.1	130472	132115
GCA_011634875.1	GCA_011634875.1_01481	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	100.00	73.38	139	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	SIRQ01000003.1	540336	540755
GCA_011634875.1	GCA_011634875.1_02129	vga	Vga family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	HMM	524	522	99.81	55.09	521	WP_012779620.1	Vga family ABC-F type ribosomal protection protein	NF000170.2	Vga family ABC-F type ribosomal protection protein	SIRQ01000006.1	28394	29968
GCA_902485115.1	GCA_902485115.1_00440	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CABTJR010000018.1	21512	23437
GCA_902485115.1	GCA_902485115.1_00656	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CABTJR010000021.1	178227	179192
GCA_902485115.1	GCA_902485115.1_01112	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	314	321	98.44	71.52	316	WP_063843242.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CABTJR010000041.1	14479	15423
GCA_000438685.2	GCA_000438685.2_00193	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	606	598	100.00	91.09	606	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK	CP006597.1	165886	167706
GCA_000438685.2	GCA_000438685.2_00733	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	133	133	100.00	100.00	133	WP_003726635.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP006597.1	665812	666213
GCA_000438685.2	GCA_000438685.2_00875	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	95.95	296	AHJ03495.1	class 3 internalin InlC	NA	NA	CP006597.1	812360	813253
GCA_000438685.2	GCA_000438685.2_01611	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	388	388	100.00	94.59	388	AEO26812.1	class 3 internalin InlP	NA	NA	CP006597.1	1508695	1509861
GCA_000438685.2	GCA_000438685.2_01700	ami	autolysin Ami	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	917	917	100.00	98.80	917	ASH48222.1	autolysin Ami	NA	NA	CP006597.1	1599592	1602345
GCA_000438685.2	GCA_000438685.2_02481	vip	cell invasion LPXTG protein Vip	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	418	399	100.00	83.25	418	AEO24620.1	cell invasion LPXTG protein Vip	NF033201.1	cell invasion LPXTG protein Vip	CP006597.1	2314087	2315343
GCA_000438685.2	GCA_000438685.2_02493	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1775	1778	100.00	93.70	1778	AEO24631.1	class 1 internalin InlI	NA	NA	CP006597.1	2332319	2337646
GCA_000438685.2	GCA_000438685.2_02595	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	36.79	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA	CP006597.1	2423674	2426076
GCA_000438685.2	GCA_000438685.2_02596	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	95.56	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA	CP006597.1	2426161	2428053
GCA_000438685.2	GCA_000438685.2_02599	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	92.68	205	AEO24735.1	nuclear targeted protein LntA	NA	NA	CP006597.1	2429753	2430370
GCA_000438685.2	GCA_000438685.2_02608	gadD1	glutamate decarboxylase GadD1	plus	STRESS	ACID	NA	NA	BLASTP	462	462	100.00	99.78	462	CAC98526.1	glutamate decarboxylase GadD1	NA	NA	CP006597.1	2441997	2443385
GCA_000438685.2	GCA_000438685.2_02669	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	609	605	100.00	94.30	614	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA	CP006597.1	2504841	2506670
GCA_000438685.2	GCA_000438685.2_03098	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	97.71	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP006597.1	2919017	2920588
GCA_000438685.2	GCA_000438685.2_03255	aut	peptidoglycan hydrolase Auto	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	572	572	100.00	98.78	572	ADB67911.1	peptidoglycan hydrolase Auto	NA	NA	CP006597.1	3063590	3065308
GCA_000438685.2	GCA_000438685.2_03322	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	EXACTP	704	704	100.00	100.00	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP006611.1	28802	30916
GCA_000438685.2	GCA_000438685.2_03342	cadC	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	119	119	100.00	100.00	119	AAA25276.1	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP006611.1	44957	45316
GCA_000438685.2	GCA_000438685.2_03440	bcrB	quaternary ammonium compound efflux SMR transporter BcrB	core	STRESS	BIOCIDE	BACITRACIN	BACITRACIN	EXACTP	105	105	100.00	100.00	105	WP_003725293.1	quaternary ammonium compound efflux SMR transporter BcrB	NF033469.1	quaternary ammonium compound efflux SMR transporter BcrB	CP006611.1	139481	139798
GCA_000438685.2	GCA_000438685.2_03441	bcrC	quaternary ammonium compound efflux SMR transporter BcrC	core	STRESS	BIOCIDE	BACITRACIN	BACITRACIN	EXACTP	114	114	100.00	100.00	114	WP_003725292.1	quaternary ammonium compound efflux SMR transporter BcrC	NF033470.1	quaternary ammonium compound efflux SMR transporter BcrC	CP006611.1	139816	140160
GCA_015552665.1	GCA_015552665.1_00493	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADNFC010000001.1	508658	509875
GCA_015552665.1	GCA_015552665.1_00494	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADNFC010000001.1	509995	511458
GCA_015552665.1	GCA_015552665.1_00499	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JADNFC010000001.1	513199	513627
GCA_015552665.1	GCA_015552665.1_00871	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JADNFC010000002.1	156312	157952
GCA_003269195.1	GCA_003269195.1_00275	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	QLTQ01000001.1	301343	303268
GCA_003269195.1	GCA_003269195.1_00537	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	QLTQ01000003.1	139889	140854
GCA_027857015.1	GCA_027857015.1_00627	tet(V)	tetracycline efflux MFS transporter Tet(V)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	416	419	97.85	68.29	410	WP_003896589.1	tetracycline efflux MFS transporter Tet(V)	NF012178.0	tetracycline efflux MFS transporter Tet(V)	CP115600.1	642102	643352
GCA_027857015.1	GCA_027857015.1_02290	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	293	97.95	66.21	293	WP_011728509.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP115600.1	2384267	2385178
GCA_027857015.1	GCA_027857015.1_03015	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	391	96.68	61.64	378	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	CP115600.1	3114254	3115429
GCA_000013465.1	GCA_000013465.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP000255.1	39127	41133
GCA_000013465.1	GCA_000013465.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP000255.1	41233	42219
GCA_000013465.1	GCA_000013465.1_00143	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP000255.1	157785	159143
GCA_000013465.1	GCA_000013465.1_00346	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP000255.1	387453	388808
GCA_000013465.1	GCA_000013465.1_00384	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP000255.1	422037	422648
GCA_000013465.1	GCA_000013465.1_00839	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.11	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP000255.1	883304	884032
GCA_000013465.1	GCA_000013465.1_00840	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.52	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP000255.1	884056	884784
GCA_000013465.1	GCA_000013465.1_01460	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP000255.1	1546170	1547147
GCA_000013465.1	GCA_000013465.1_01461	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP000255.1	1547149	1548087
GCA_000013465.1	GCA_000013465.1_01652	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP000255.1	1708167	1708919
GCA_000013465.1	GCA_000013465.1_01825	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP000255.1	1901091	1902383
GCA_000013465.1	GCA_000013465.1_01868	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP000255.1	1939625	1940341
GCA_000013465.1	GCA_000013465.1_01871	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP000255.1	1942116	1942838
GCA_000013465.1	GCA_000013465.1_01872	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP000255.1	1942963	1943670
GCA_000013465.1	GCA_000013465.1_01882	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP000255.1	1955319	1956302
GCA_000013465.1	GCA_000013465.1_01883	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP000255.1	1956304	1957239
GCA_000013465.1	GCA_000013465.1_02042	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP000255.1	2085861	2086211
GCA_000013465.1	GCA_000013465.1_02047	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP000255.1	2088425	2088916
GCA_000013465.1	GCA_000013465.1_02124	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP000255.1	2146572	2146706
GCA_000013465.1	GCA_000013465.1_02272	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.58	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP000255.1	2299243	2300685
GCA_000013465.1	GCA_000013465.1_02447	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP000255.1	2452433	2452852
GCA_000013465.1	GCA_000013465.1_02534	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP000255.1	2542091	2543056
GCA_000013465.1	GCA_000013465.1_02535	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP000255.1	2543623	2544570
GCA_000013465.1	GCA_000013465.1_02536	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP000255.1	2544572	2545549
GCA_000013465.1	GCA_000013465.1_02758	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP000255.1	2784112	2785641
GCA_000013465.1	GCA_000013465.1_02792	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP000255.1	2828974	2830026
GCA_000013465.1	GCA_000013465.1_02844	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492284.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP000257.1	36	1415
GCA_000013465.1	GCA_000013465.1_02851	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP000258.1	2162	5236
GCA_000013465.1	GCA_000013465.1_02855	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003260.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP000258.1	7865	8599
GCA_030218005.1	GCA_030218005.1_00463	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASOOZ010000017.1	9851	11275
GCA_030218005.1	GCA_030218005.1_00467	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASOOZ010000017.1	12997	13851
GCA_030218005.1	GCA_030218005.1_01351	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASOOZ010000031.1	99	1880
GCA_003971285.1	GCA_003971285.1_01439	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	CP034664.1	1547720	1548661
GCA_002273005.1	GCA_002273005.1_02148	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	NQMQ01000051.1	215	1390
GCA_002273005.1	GCA_002273005.1_02149	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	NQMQ01000051.1	1594	2430
GCA_002273005.1	GCA_002273005.1_02150	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NQMQ01000051.1	2430	3233
GCA_002273005.1	GCA_002273005.1_02153	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	276	279	98.92	99.64	276	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	NQMQ01000052.1	735	1565
GCA_002273005.1	GCA_002273005.1_02162	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NQMQ01000060.1	113	928
GCA_008369405.1	GCA_008369405.1_00460	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VSJJ01000001.1	445290	447209
GCA_008369405.1	GCA_008369405.1_00471	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	VSJJ01000001.1	457069	457806
GCA_001810135.1	GCA_001810135.1_00732	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	639	92.80	98.82	593	WP_050618045.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV800096.1	8687	10474
GCA_001810135.1	GCA_001810135.1_01564	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV800108.1	858759	860417
GCA_011682935.1	GCA_011682935.1_01571	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	VCPB01000029.1	10147	11688
GCA_011682935.1	GCA_011682935.1_01572	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VCPB01000029.1	11951	12805
GCA_011682935.1	GCA_011682935.1_01574	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	VCPB01000029.1	13605	14051
GCA_011682935.1	GCA_011682935.1_01874	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	VCPB01000035.1	1544	3463
GCA_011682935.1	GCA_011682935.1_01877	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VCPB01000035.1	6227	8008
GCA_011682935.1	GCA_011682935.1_01903	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VCPB01000038.1	1143	2318
GCA_011682935.1	GCA_011682935.1_01905	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	VCPB01000038.1	2522	3358
GCA_011682935.1	GCA_011682935.1_01906	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	VCPB01000038.1	3358	3777
GCA_011682935.1	GCA_011682935.1_02486	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	VCPB01000060.1	207	1022
GCA_022485095.1	GCA_022485095.1_00276	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKVEX010000015.1	19220	20686
GCA_022485095.1	GCA_022485095.1_00301	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	522	522	100.00	97.32	522	WP_032489639.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	JAKVEX010000016.1	15168	16736
GCA_022485095.1	GCA_022485095.1_00898	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAKVEX010000022.1	1248	2627
GCA_022485095.1	GCA_022485095.1_00906	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JAKVEX010000023.1	126	869
GCA_022485095.1	GCA_022485095.1_00910	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKVEX010000023.1	2991	4748
GCA_022485095.1	GCA_022485095.1_00911	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKVEX010000023.1	4738	5118
GCA_022485095.1	GCA_022485095.1_00912	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKVEX010000024.1	239	2245
GCA_022485095.1	GCA_022485095.1_00918	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAKVEX010000025.1	1676	2236
GCA_022485095.1	GCA_022485095.1_00919	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAKVEX010000025.1	2420	3964
GCA_022485095.1	GCA_022485095.1_00941	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVEX010000002.1	5296	5697
GCA_022485095.1	GCA_022485095.1_00942	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVEX010000002.1	5715	7004
GCA_022485095.1	GCA_022485095.1_00950	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVEX010000002.1	13221	14510
GCA_022485095.1	GCA_022485095.1_00954	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKVEX010000002.1	16676	17023
GCA_022485095.1	GCA_022485095.1_00962	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVEX010000002.1	25939	26331
GCA_022485095.1	GCA_022485095.1_00963	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.17	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVEX010000002.1	26349	27641
GCA_022485095.1	GCA_022485095.1_01325	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAKVEX010000031.1	621	1106
GCA_030229685.1	GCA_030229685.1_02085	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPHZ010000007.1	129727	130581
GCA_001311355.1	GCA_001311355.1_03038	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	111	107	96.26	54.29	105	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BBAR01000068.1	875	1210
GCA_001311355.1	GCA_001311355.1_03134	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BBAR01000075.1	473	2368
GCA_001206055.1	GCA_001206055.1_00740	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	98.48	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CRAA01000007.1	11074	12495
GCA_001206055.1	GCA_001206055.1_01244	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CRAA01000016.1	25980	27899
GCA_024584435.1	GCA_024584435.1_01497	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	129	120	99.17	39.53	129	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP102197.1	1670185	1670574
GCA_001698065.1	GCA_001698065.1_00063	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016681.1	53915	55441
GCA_001698065.1	GCA_001698065.1_01108	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016681.1	1123214	1124593
GCA_001698065.1	GCA_001698065.1_01818	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016681.1	1866157	1867062
GCA_001698065.1	GCA_001698065.1_01944	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016681.1	2001434	2002672
GCA_001698065.1	GCA_001698065.1_01945	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016681.1	2003080	2003712
GCA_001698065.1	GCA_001698065.1_01947	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016681.1	2004537	2006105
GCA_019929885.1	GCA_019929885.1_00269	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZQJ010000001.1	259456	259884
GCA_025150105.1	GCA_025150105.1_01419	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAMBAX010000017.1	7	852
GCA_025150105.1	GCA_025150105.1_01420	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAMBAX010000017.1	959	2716
GCA_025150105.1	GCA_025150105.1_01421	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAMBAX010000017.1	2706	3086
GCA_025150105.1	GCA_025150105.1_01423	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAMBAX010000017.1	4174	5640
GCA_025150105.1	GCA_025150105.1_01460	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAMBAX010000002.1	36390	37682
GCA_025150105.1	GCA_025150105.1_01764	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JAMBAX010000020.1	933	4007
GCA_025150105.1	GCA_025150105.1_01779	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAMBAX010000025.1	537	860
GCA_025150105.1	GCA_025150105.1_02530	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAMBAX010000009.1	2786	3133
GCA_025150105.1	GCA_025150105.1_02534	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAMBAX010000009.1	6816	8108
GCA_027696975.1	GCA_027696975.1_02060	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAQETA010000041.1	3667	4467
GCA_001588715.1	GCA_001588715.1_00210	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LAWK01000001.1	225367	227007
GCA_001588715.1	GCA_001588715.1_00811	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LAWK01000003.1	336179	338098
GCA_022689035.1	GCA_022689035.1_00175	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	69.57	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCYD010000015.1	5103	5522
GCA_022689035.1	GCA_022689035.1_01686	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCYD010000003.1	289444	290736
GCA_023375285.1	GCA_023375285.1_00602	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	PARTIALP	378	704	53.41	98.94	376	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP088203.1	666449	667585
GCA_023375285.1	GCA_023375285.1_00678	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	501	500	99.40	80.28	497	WP_002296175.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP088203.1	749443	750948
GCA_023375285.1	GCA_023375285.1_01950	copB	copper/silver-translocating P-type ATPase CopB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	781	745	95.57	84.70	719	AFM70730.1	copper/silver-translocating P-type ATPase CopB	NA	NA	CP088203.1	2038482	2040827
GCA_023375285.1	GCA_023375285.1_02358	aac(6)-Iih	aminoglycoside N-acetyltransferase AAC(6)-Iih	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ALLELEP	183	183	100.00	100.00	183	WP_005880220.1	aminoglycoside N-acetyltransferase AAC(6)-Iih	NF000165.3	aminoglycoside 6-N-acetyltransferase	CP088203.1	2471586	2472137
GCA_023375285.1	GCA_023375285.1_02888	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	458	458	100.00	98.69	458	WP_002294500.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP088204.1	6152	7528
GCA_023375285.1	GCA_023375285.1_02889	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_001574275.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP088204.1	7722	9641
GCA_023375285.1	GCA_023375285.1_02894	poxtA	ABC-F type ribosomal protection protein PoxtA	core	AMR	AMR	OXAZOLIDINONE/PHENICOL	CHLORAMPHENICOL/FLORFENICOL/LINEZOLID	EXACTP	542	542	100.00	100.00	542	WP_002415638.1	ABC-F type ribosomal protection protein PoxtA	NA	NA	CP088204.1	13331	14959
GCA_023375285.1	GCA_023375285.1_02907	fexB	chloramphenicol/florfenicol efflux MFS transporter FexB	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	469	469	100.00	100.00	469	WP_002415211.1	chloramphenicol/florfenicol efflux MFS transporter FexB	NF040856.1	chloramphenicol/florfenicol efflux MFS transporter FexB	CP088205.1	3562	4971
GCA_001814885.1	GCA_001814885.1_00662	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV818300.1	637	1491
GCA_001814885.1	GCA_001814885.1_01436	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV818328.1	166039	167463
GCA_000234055.1	GCA_000234055.1_01631	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JH376764.1	231059	232249
GCA_005890445.1	GCA_005890445.1_00745	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	SOQU01000130.1	148725	149462
GCA_005890445.1	GCA_005890445.1_00746	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	SOQU01000130.1	150569	152488
GCA_005890445.1	GCA_005890445.1_01030	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQU01000024.1	39508	40929
GCA_003263975.1	GCA_003263975.1_00976	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NAQQ01000002.1	12752	13126
GCA_936940875.1	GCA_936940875.1_01211	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.55	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CAKZJA010000015.1	114483	115772
GCA_002871755.1	GCA_002871755.1_00610	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	42.28	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	PNHH01000014.1	5114	5482
GCA_016726625.1	GCA_016726625.1_01110	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	96.98	76.10	385	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP068187.1	1060104	1061324
GCA_016726625.1	GCA_016726625.1_02365	blaOXA	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	274	274	100.00	97.08	274	WP_140423314.1	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-645	NF000417.2	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	CP068187.1	2281297	2282121
GCA_022569245.1	GCA_022569245.1_00142	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKU010000001.1	140678	141970
GCA_022569245.1	GCA_022569245.1_00275	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKU010000001.1	284556	285629
GCA_022569245.1	GCA_022569245.1_01576	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKU010000006.1	95806	96225
GCA_022569245.1	GCA_022569245.1_02458	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKRKU010000019.1	87	467
GCA_022569245.1	GCA_022569245.1_02459	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKRKU010000019.1	457	2214
GCA_022569245.1	GCA_022569245.1_02460	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKRKU010000019.1	2321	3166
GCA_006741845.1	GCA_006741845.1_00262	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	267	268	99.63	62.59	270	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	AP019714.1	228148	228951
GCA_006741845.1	GCA_006741845.1_00304	mphK	macrolide 2-phosphotransferase MphK	core	AMR	AMR	MACROLIDE	TELITHROMYCIN/TYLOSIN	EXACTP	306	306	100.00	100.00	306	WP_003246254.1	macrolide 2-phosphotransferase MphK	NA	NA	AP019714.1	275437	276357
GCA_006741845.1	GCA_006741845.1_00644	vmlR	ABC-F type ribosomal protection protein VmlR	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOMYCIN/TIAMULIN/VIRGINIAMYCIN M	EXACTP	547	547	100.00	100.00	547	WP_003234144.1	ABC-F type ribosomal protection protein VmlR	NA	NA	AP019714.1	604333	605976
GCA_006741845.1	GCA_006741845.1_01958	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	144	140	100.00	75.00	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	AP019714.1	1916264	1916698
GCA_006741845.1	GCA_006741845.1_02064	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	309	98.06	66.99	306	WP_011053164.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	AP019714.1	2043763	2044683
GCA_006741845.1	GCA_006741845.1_02805	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	139	139	100.00	100.00	139	CAB14519.1	thioredoxin-dependent arsenate reductase	NA	NA	AP019714.1	2650622	2651041
GCA_006741845.1	GCA_006741845.1_02806	acr3	arsenite efflux transporter Acr3	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	346	346	100.00	100.00	346	CAB14520.2	arsenite efflux transporter Acr3	NA	NA	AP019714.1	2651053	2652093
GCA_006741845.1	GCA_006741845.1_02907	aadK	aminoglycoside 6-adenylyltransferase AadK	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	284	284	100.00	100.00	284	WP_003229862.1	aminoglycoside 6-adenylyltransferase AadK	NF000312.1	aminoglycoside 6-adenylyltransferase AadK	AP019714.1	2730983	2731837
GCA_006741845.1	GCA_006741845.1_04397	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	173	173	100.00	100.00	173	WP_003242546.1	streptothricin N-acetyltransferase SatA	NA	NA	AP019714.1	4180235	4180756
GCA_006741845.1	GCA_006741845.1_04400	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_003242953.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	AP019714.1	4182756	4184132
GCA_000212535.2	GCA_000212535.2_01003	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AFGS01000004.1	106982	108772
GCA_000212535.2	GCA_000212535.2_01538	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AFGS01000003.1	50590	52053
GCA_000212535.2	GCA_000212535.2_01539	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	362	405	89.38	100.00	362	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AFGS01000003.1	52074	53162
GCA_003598235.1	GCA_003598235.1_01282	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	100.00	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	PTTL01000052.1	610	1743
GCA_030440305.1	GCA_030440305.1_00498	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP047655.1	528842	529696
GCA_030440305.1	GCA_030440305.1_00517	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP047655.1	548350	549165
GCA_030440305.1	GCA_030440305.1_00519	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP047655.1	550466	551269
GCA_030440305.1	GCA_030440305.1_00520	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP047655.1	551269	552105
GCA_030440305.1	GCA_030440305.1_00521	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP047655.1	552309	553484
GCA_030440305.1	GCA_030440305.1_00525	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	276	279	98.92	99.64	276	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP047655.1	556216	557046
GCA_030440305.1	GCA_030440305.1_00901	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP047655.1	962923	963777
GCA_008327825.1	GCA_008327825.1_01180	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	83.54	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AP019827.1	1228506	1229984
GCA_947062025.1	GCA_947062025.1_00827	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAMSPR010000017.1	36718	37518
GCA_016127495.1	GCA_016127495.1_01946	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	394	391	97.95	66.41	384	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	CP066015.1	2028744	2029928
GCA_016127495.1	GCA_016127495.1_02133	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.19	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP066015.1	2201078	2202502
GCA_016127495.1	GCA_016127495.1_02134	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	216	218	87.61	46.35	192	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP066015.1	2202523	2203173
GCA_000196595.1	GCA_000196595.1_01385	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP001993.1	1317553	1317981
GCA_000196595.1	GCA_000196595.1_01478	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP001993.1	1397750	1398949
GCA_000196595.1	GCA_000196595.1_02123	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP001993.1	2009318	2010055
GCA_000196595.1	GCA_000196595.1_02134	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP001993.1	2019970	2021889
GCA_000196595.1	GCA_000196595.1_02139	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP001993.1	2023615	2025078
GCA_000196595.1	GCA_000196595.1_02140	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP001993.1	2025198	2026415
GCA_008329445.1	GCA_008329445.1_00952	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	VIBR01000001.1	935683	937122
GCA_008329445.1	GCA_008329445.1_00954	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_063856403.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VIBR01000001.1	937470	939389
GCA_008329445.1	GCA_008329445.1_00965	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	VIBR01000001.1	949304	950041
GCA_022350025.1	GCA_022350025.1_02509	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	96.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP092267.1	2940	5054
GCA_001063405.1	GCA_001063405.1_02176	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	338	639	52.74	100.00	337	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	JVHF01000049.1	40106	41122
GCA_001471795.2	GCA_001471795.2_01214	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LORQ02000003.1	1245503	1246795
GCA_001471795.2	GCA_001471795.2_02544	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	LORQ02000002.1	4754	6220
GCA_022345865.1	GCA_022345865.1_01095	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDN010000003.1	291	1145
GCA_001435895.1	GCA_001435895.1_02695	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AZFZ01000074.1	6844	8739
GCA_011058695.1	GCA_011058695.1_00896	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP049223.1	909177	909914
GCA_011058695.1	GCA_011058695.1_00897	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP049223.1	911021	912940
GCA_011058695.1	GCA_011058695.1_00976	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	86.99	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP049223.1	1018764	1020242
GCA_027627515.1	GCA_027627515.1_00204	tet(V)	tetracycline efflux MFS transporter Tet(V)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	416	419	97.85	68.29	410	WP_003896589.1	tetracycline efflux MFS transporter Tet(V)	NF012178.0	tetracycline efflux MFS transporter Tet(V)	CP115466.1	220619	221869
GCA_027627515.1	GCA_027627515.1_02289	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	293	97.95	66.21	293	WP_011728509.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP115466.1	2383441	2384352
GCA_027627515.1	GCA_027627515.1_02781	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	391	96.68	61.64	378	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	CP115466.1	2860605	2861780
GCA_030450025.1	GCA_030450025.1_01776	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP109936.1	1994155	1995009
GCA_001838285.1	GCA_001838285.1_00217	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	KV836190.1	122	937
GCA_001838285.1	GCA_001838285.1_00938	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV836205.1	853	1707
GCA_001838285.1	GCA_001838285.1_01421	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.49	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV836226.1	56	1837
GCA_001838285.1	GCA_001838285.1_01436	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	KV836230.1	1158	2333
GCA_001838285.1	GCA_001838285.1_01438	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	KV836230.1	2537	3373
GCA_001838285.1	GCA_001838285.1_01439	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	KV836230.1	3373	4176
GCA_009378215.1	GCA_009378215.1_00343	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCF01000012.1	54558	55499
GCA_000971855.1	GCA_000971855.1_02060	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	42.28	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JYDD01000008.1	124074	124442
GCA_000223335.2	GCA_000223335.2_01841	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AFUQ01000001.1	702976	703404
GCA_000223335.2	GCA_000223335.2_01913	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AFUQ01000001.1	762655	763872
GCA_026782145.1	GCA_026782145.1_00986	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAKUVX010000002.1	747326	749245
GCA_026782145.1	GCA_026782145.1_01000	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.39	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAKUVX010000002.1	762364	763842
GCA_002753855.1	GCA_002753855.1_01567	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	PEKM01000001.1	1762619	1763584
GCA_002753855.1	GCA_002753855.1_01572	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	PEKM01000001.1	1767730	1769655
GCA_002753855.1	GCA_002753855.1_01589	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	PEKM01000001.1	1793874	1794674
GCA_000622225.1	GCA_000622225.1_02897	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	305	97.38	54.13	303	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JHWD01000011.1	111357	112277
GCA_022487705.1	GCA_022487705.1_00207	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAKVGY010000014.1	15356	16900
GCA_022487705.1	GCA_022487705.1_00208	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAKVGY010000014.1	17084	17644
GCA_022487705.1	GCA_022487705.1_00210	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAKVGY010000014.1	18943	19842
GCA_022487705.1	GCA_022487705.1_00211	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKVGY010000014.1	19941	21407
GCA_022487705.1	GCA_022487705.1_00222	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	97.71	91.41	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVGY010000015.1	12809	13210
GCA_022487705.1	GCA_022487705.1_00259	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	JAKVGY010000019.1	3034	4602
GCA_022487705.1	GCA_022487705.1_00839	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAKVGY010000024.1	721	1206
GCA_022487705.1	GCA_022487705.1_00876	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVGY010000002.1	36361	37650
GCA_022487705.1	GCA_022487705.1_00880	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKVGY010000002.1	39816	40163
GCA_022487705.1	GCA_022487705.1_00896	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	91.41	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVGY010000002.1	60214	60606
GCA_022487705.1	GCA_022487705.1_00897	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	88.58	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVGY010000002.1	60624	61913
GCA_900475505.1	GCA_900475505.1_00331	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LS483385.1	306533	308191
GCA_029872115.1	GCA_029872115.1_02878	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	411	95.38	60.66	394	WP_011552636.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	JARXND010000003.1	2113328	2114521
GCA_029872115.1	GCA_029872115.1_03669	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	273	277	93.86	58.08	260	WP_337883258.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	JARXND010000003.1	2918531	2919352
GCA_013277375.1	GCA_013277375.1_01588	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMMV01000057.1	26445	27578
GCA_003494195.1	GCA_003494195.1_00975	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.26	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQIS01000003.1	69852	71246
GCA_023078375.1	GCA_023078375.1_00978	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	308	305	97.38	53.67	313	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP095554.1	1053656	1054582
GCA_002761955.1	GCA_002761955.1_01558	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	PEQY01000001.1	1531873	1533792
GCA_018407735.1	GCA_018407735.1_00037	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAGSXE010000001.1	39009	39431
GCA_018407735.1	GCA_018407735.1_00089	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAGSXE010000001.1	98625	99698
GCA_018407735.1	GCA_018407735.1_02217	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.16	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGSXE010000008.1	24638	25927
GCA_018407735.1	GCA_018407735.1_02345	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAGSXE010000009.1	62293	62694
GCA_018407735.1	GCA_018407735.1_02346	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	94.41	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGSXE010000009.1	62712	64001
GCA_018407735.1	GCA_018407735.1_02347	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	96.15	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAGSXE010000009.1	64001	64315
GCA_018407735.1	GCA_018407735.1_02440	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAGSXE010000012.1	775	1122
GCA_018407735.1	GCA_018407735.1_02444	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.74	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGSXE010000012.1	4805	6097
GCA_018407735.1	GCA_018407735.1_02445	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAGSXE010000012.1	6114	6509
GCA_014266385.1	GCA_014266385.1_00470	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	96.72	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	JACMVT010000017.1	15945	16313
GCA_014266385.1	GCA_014266385.1_00472	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JACMVT010000017.1	17678	18577
GCA_014266385.1	GCA_014266385.1_00473	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JACMVT010000017.1	18676	20142
GCA_014266385.1	GCA_014266385.1_01888	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMVT010000001.1	127743	129287
GCA_014266385.1	GCA_014266385.1_01889	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMVT010000001.1	129465	130031
GCA_014266385.1	GCA_014266385.1_01975	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.62	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVT010000001.1	217522	218811
GCA_023509295.1	GCA_023509295.1_00221	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP091864.1	243917	244771
GCA_023110255.1	GCA_023110255.1_00484	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JALGPV010000001.1	521509	523428
GCA_023110255.1	GCA_023110255.1_00860	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JALGPV010000001.1	895896	896633
GCA_023110255.1	GCA_023110255.1_00871	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALGPV010000001.1	906548	908467
GCA_002763575.1	GCA_002763575.1_02194	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP024697.1	2516446	2517411
GCA_002763575.1	GCA_002763575.1_02272	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP024697.1	2596521	2597321
GCA_002763575.1	GCA_002763575.1_02280	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP024697.1	2610372	2612297
GCA_946221605.1	GCA_946221605.1_01604	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	220	212	96.70	46.12	206	CAC86907.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CAMIGC010000010.1	29140	29802
GCA_946221605.1	GCA_946221605.1_01605	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAMIGC010000010.1	29853	31274
GCA_963394935.1	GCA_963394935.1_00044	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPX010000001.1	46208	47587
GCA_963394935.1	GCA_963394935.1_00514	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	88.41	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAUJPX010000004.1	87754	89232
GCA_000159695.1	GCA_000159695.1_00042	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	145	144	97.22	62.14	140	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CM000955.1	50095	50532
GCA_000159695.1	GCA_000159695.1_00448	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CM000955.1	474645	476564
GCA_003944465.1	GCA_003944465.1_00331	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJMK01000001.1	324301	325518
GCA_003944465.1	GCA_003944465.1_00332	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJMK01000001.1	325638	327101
GCA_900187235.1	GCA_900187235.1_00057	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LT906481.1	63665	65086
GCA_900187235.1	GCA_900187235.1_00171	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	LT906481.1	197826	199001
GCA_900187235.1	GCA_900187235.1_00984	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	LT906481.1	1103062	1103877
GCA_900187235.1	GCA_900187235.1_00987	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	LT906481.1	1105562	1105981
GCA_900187235.1	GCA_900187235.1_00988	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	192	278	69.06	100.00	192	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	LT906481.1	1106239	1106817
GCA_900187235.1	GCA_900187235.1_00989	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	LT906481.1	1107021	1108196
GCA_900187235.1	GCA_900187235.1_01018	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.33	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	LT906481.1	1138469	1140250
GCA_900187235.1	GCA_900187235.1_01023	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.33	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	LT906481.1	1145155	1146936
GCA_900187235.1	GCA_900187235.1_01768	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	LT906481.1	2024909	2025763
GCA_900187235.1	GCA_900187235.1_01770	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	520	513	100.00	97.66	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	LT906481.1	2027341	2028903
GCA_023277545.1	GCA_023277545.1_00103	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	570	492	99.80	90.84	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP083168.1	119108	120820
GCA_022689305.1	GCA_022689305.1_00325	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXP010000014.1	42943	43362
GCA_022689305.1	GCA_022689305.1_01097	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCXP010000020.1	87	467
GCA_022689305.1	GCA_022689305.1_01098	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCXP010000020.1	457	2214
GCA_022689305.1	GCA_022689305.1_01099	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCXP010000020.1	2321	3166
GCA_022689305.1	GCA_022689305.1_01258	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXP010000002.1	140755	142047
GCA_022689305.1	GCA_022689305.1_01392	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXP010000002.1	284690	285763
GCA_004336685.1	GCA_004336685.1_01248	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	SJWZ01000006.1	90496	91974
GCA_962747745.1	GCA_962747745.1_00664	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIZT010000006.1	56109	57635
GCA_962747745.1	GCA_962747745.1_00818	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIZT010000008.1	3328	4707
GCA_962747745.1	GCA_962747745.1_01285	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIZT010000015.1	21332	22237
GCA_962747745.1	GCA_962747745.1_01515	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIZT010000021.1	6961	8199
GCA_962747745.1	GCA_962747745.1_01516	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	251	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIZT010000021.1	8316	9071
GCA_000175895.1	GCA_000175895.1_00010	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	92.31	65.69	204	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	ACYH01000073.1	1012	1659
GCA_023824295.1	GCA_023824295.1_00183	mcr-5.1	phosphoethanolamine--lipid A transferase MCR-5.1	core	AMR	AMR	COLISTIN	COLISTIN	ALLELEP	547	547	100.00	100.00	547	WP_053821788.1	phosphoethanolamine--lipid A transferase MCR-5.1	NF033463.1	MCR-5 family phosphoethanolamine--lipid A transferase	CP098735.1	224435	226078
GCA_023824295.1	GCA_023824295.1_00187	mcr-5.1	phosphoethanolamine--lipid A transferase MCR-5.1	core	AMR	AMR	COLISTIN	COLISTIN	ALLELEP	547	547	100.00	100.00	547	WP_053821788.1	phosphoethanolamine--lipid A transferase MCR-5.1	NF033463.1	MCR-5 family phosphoethanolamine--lipid A transferase	CP098735.1	228672	230315
GCA_023824295.1	GCA_023824295.1_00248	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP098735.1	295641	295877
GCA_023824295.1	GCA_023824295.1_00249	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP098735.1	295874	296239
GCA_023824295.1	GCA_023824295.1_00250	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	93.40	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP098735.1	296257	297942
GCA_023824295.1	GCA_023824295.1_00251	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP098735.1	298014	298289
GCA_023824295.1	GCA_023824295.1_00252	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	99.14	116	AAA98222.1	mercuric transport protein MerT	NA	NA	CP098735.1	298305	298655
GCA_023824295.1	GCA_023824295.1_00253	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	AAA98221.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP098735.1	298727	299161
GCA_023824295.1	GCA_023824295.1_00616	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	400	390	95.64	47.06	374	WP_063857697.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP098735.1	691731	692933
GCA_023824295.1	GCA_023824295.1_01716	blaOXA	OXA-837 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	301	100.00	81.97	305	WP_148281568.1	OXA-837 family class D beta-lactamase	NF042983.1	OXA-837 family class D beta-lactamase	CP098735.1	1938538	1939455
GCA_023824295.1	GCA_023824295.1_01943	aac(3)-IV	AAC(3)-IV family aminoglycoside N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	262	265	96.98	82.10	257	WP_149317372.1	AAC(3)-IV family aminoglycoside N-acetyltransferase	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	CP098736.1	13442	14230
GCA_023824295.1	GCA_023824295.1_02048	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.47	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP098736.1	126316	129165
GCA_023824295.1	GCA_023824295.1_05297	mcr-5.1	phosphoethanolamine--lipid A transferase MCR-5.1	core	AMR	AMR	COLISTIN	COLISTIN	ALLELEP	547	547	100.00	100.00	547	WP_053821788.1	phosphoethanolamine--lipid A transferase MCR-5.1	NF033463.1	MCR-5 family phosphoethanolamine--lipid A transferase	CP098737.1	3673	5316
GCA_023824295.1	GCA_023824295.1_05365	mcr-5	MCR-5 family phosphoethanolamine--lipid A transferase	core	AMR	AMR	COLISTIN	COLISTIN	BLASTP	525	547	95.43	100.00	522	WP_053821788.1	phosphoethanolamine--lipid A transferase MCR-5.1	NF033463.1	MCR-5 family phosphoethanolamine--lipid A transferase	CP098737.1	81983	83560
GCA_000020665.1	GCA_000020665.1_01331	emrC	multidrug efflux transporter outer membrane subunit EmrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	498	497	100.00	94.58	498	CAQ45062.1	multidrug efflux transporter outer membrane subunit EmrC	NA	NA	CP001111.1	1466442	1467938
GCA_000020665.1	GCA_000020665.1_01332	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	392	393	100.00	98.98	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	CP001111.1	1467950	1469128
GCA_000020665.1	GCA_000020665.1_01333	emrB	multidrug efflux MFS transporter permease subunit EmrB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	529	528	100.00	97.73	529	CAQ45064.1	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	CP001111.1	1469136	1470725
GCA_000020665.1	GCA_000020665.1_01781	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	267	267	100.00	87.64	267	WP_012479999.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP001111.1	1930418	1931221
GCA_000020665.1	GCA_000020665.1_01988	aph(6)	APH(6) family putative aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	270	270	99.63	87.36	269	WP_012480135.1	APH(6) family putative aminoglycoside O-phosphotransferase	NF012160.0	APH(6) family putative aminoglycoside O-phosphotransferase	CP001111.1	2161617	2162429
GCA_000020665.1	GCA_000020665.1_02210	blaL1	L1 family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	290	290	100.00	90.69	290	WP_063842676.1	L1 family subclass B3 metallo-beta-lactamase	NF033106.1	L1 family subclass B3 metallo-beta-lactamase	CP001111.1	2406741	2407613
GCA_000020665.1	GCA_000020665.1_03223	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	304	100.00	70.07	304	WP_063842700.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP001111.1	3504276	3505187
GCA_000020665.1	GCA_000020665.1_03561	smeF	multidrug efflux RND transporter outer membrane subunit SmeF	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	461	466	98.93	98.92	461	CAC14596.1	multidrug efflux RND transporter outer membrane subunit SmeF	NA	NA	CP001111.1	3899195	3900580
GCA_000020665.1	GCA_000020665.1_03647	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	411	94.89	59.23	390	WP_011552636.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP001111.1	3993458	3994645
GCA_000020665.1	GCA_000020665.1_03880	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	144	150	85.33	53.91	128	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP001111.1	4244096	4244530
GCA_009734165.1	GCA_009734165.1_01346	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.33	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP046397.1	1552112	1553443
GCA_009734165.1	GCA_009734165.1_02108	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP046397.1	2406998	2408923
GCA_009734165.1	GCA_009734165.1_04974	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.90	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP046397.1	6304855	6305736
GCA_023195735.1	GCA_023195735.1_00878	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	116	116	100.00	93.97	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP096201.1	887940	888290
GCA_023195735.1	GCA_023195735.1_00879	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	90.83	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP096201.1	888338	888700
GCA_023195735.1	GCA_023195735.1_00880	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	95.20	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP096201.1	888717	890468
GCA_023195735.1	GCA_023195735.1_00881	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.14	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP096201.1	890516	891805
GCA_023195735.1	GCA_023195735.1_00882	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	90.78	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP096201.1	891818	892243
GCA_023195735.1	GCA_023195735.1_01450	blaCTX-M	CTX-M family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	291	291	100.00	99.66	291	WP_063860092.1	extended-spectrum class A beta-lactamase CTX-M-95	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	CP096201.1	1478658	1479533
GCA_023195735.1	GCA_023195735.1_03098	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	142	139	100.00	81.29	139	WP_004857515.1	FosA family fosfomycin resistance glutathione transferase	NF000221.4	FosA family fosfomycin resistance glutathione transferase	CP096201.1	3164224	3164652
GCA_023195735.1	GCA_023195735.1_03860	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	731	100.00	82.63	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	CP096201.1	3928855	3931053
GCA_023195735.1	GCA_023195735.1_04485	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	116	116	100.00	93.97	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP096201.1	4587129	4587479
GCA_023195735.1	GCA_023195735.1_04487	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	96.74	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP096201.1	4587873	4589162
GCA_023195735.1	GCA_023195735.1_04488	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	90.07	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP096201.1	4589175	4589600
GCA_023195735.1	GCA_023195735.1_04844	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	90.17	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP096201.1	4947252	4948145
GCA_020560985.1	GCA_020560985.1_00619	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAJCNH010000015.1	48978	50897
GCA_021398345.1	GCA_021398345.1_00066	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP071994.1	71629	72918
GCA_021398345.1	GCA_021398345.1_00069	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP071994.1	75095	75442
GCA_021398345.1	GCA_021398345.1_00142	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	98.59	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP071994.1	157929	158357
GCA_030176495.1	GCA_030176495.1_00063	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	86.70	45.13	195	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JASNUN010000010.1	56264	56917
GCA_030176495.1	GCA_030176495.1_00064	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASNUN010000010.1	56952	58376
GCA_019222685.1	GCA_019222685.1_00047	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP078159.1	51773	53062
GCA_019222685.1	GCA_019222685.1_00051	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP078159.1	55228	55575
GCA_019222685.1	GCA_019222685.1_00144	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.55	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP078159.1	145854	147146
GCA_019222685.1	GCA_019222685.1_02292	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.39	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP078159.1	2181623	2183089
GCA_019222685.1	GCA_019222685.1_02293	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	BLASTP	299	299	100.00	99.67	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP078159.1	2183188	2184087
GCA_000160615.1	GCA_000160615.1_01547	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	GG668518.1	499042	500961
GCA_022690295.1	GCA_022690295.1_00160	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCVR010000013.1	5697	7163
GCA_022690295.1	GCA_022690295.1_01183	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCVR010000002.1	274389	274769
GCA_022690295.1	GCA_022690295.1_01184	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCVR010000002.1	274759	276516
GCA_022690295.1	GCA_022690295.1_01185	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCVR010000002.1	276623	277468
GCA_022690295.1	GCA_022690295.1_01512	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVR010000004.1	34957	36249
GCA_022690295.1	GCA_022690295.1_01516	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVR010000004.1	39932	40279
GCA_022690295.1	GCA_022690295.1_01612	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCVR010000004.1	141885	142451
GCA_022690295.1	GCA_022690295.1_01613	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCVR010000004.1	142629	144173
GCA_003578345.1	GCA_003578345.1_01145	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	QXRK01000017.1	48365	49654
GCA_003578345.1	GCA_003578345.1_02396	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	QXRK01000075.1	3189	4481
GCA_003578345.1	GCA_003578345.1_02397	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	QXRK01000075.1	4499	4891
GCA_003578345.1	GCA_003578345.1_02405	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	QXRK01000076.1	3499	4572
GCA_000413335.1	GCA_000413335.1_00200	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KE340299.1	214965	215366
GCA_000413335.1	GCA_000413335.1_00880	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.85	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KE340299.1	950939	951349
GCA_019329425.1	GCA_019329425.1_00090	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073835.1	89819	91825
GCA_019329425.1	GCA_019329425.1_00091	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073835.1	91925	93682
GCA_019329425.1	GCA_019329425.1_00092	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073835.1	93682	94053
GCA_019329425.1	GCA_019329425.1_00138	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073835.1	133019	133357
GCA_019329425.1	GCA_019329425.1_00139	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073835.1	133415	135058
GCA_019329425.1	GCA_019329425.1_00140	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073835.1	135140	135790
GCA_019329425.1	GCA_019329425.1_00149	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073835.1	143244	144542
GCA_019329425.1	GCA_019329425.1_00152	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073835.1	146711	147058
GCA_019329425.1	GCA_019329425.1_00229	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073835.1	229313	229549
GCA_019329425.1	GCA_019329425.1_00280	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073835.1	287347	288414
GCA_019329425.1	GCA_019329425.1_01832	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073835.1	1844840	1845220
GCA_019329425.1	GCA_019329425.1_01833	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073835.1	1845210	1846967
GCA_019329425.1	GCA_019329425.1_01834	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073835.1	1847074	1847919
GCA_019329425.1	GCA_019329425.1_01855	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073835.1	1866739	1867380
GCA_019329425.1	GCA_019329425.1_01976	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073835.1	1943008	1944447
GCA_019329425.1	GCA_019329425.1_01979	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073835.1	1946203	1946688
GCA_019329425.1	GCA_019329425.1_02811	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073833.1	7164	7724
GCA_019329425.1	GCA_019329425.1_02812	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073833.1	7908	9452
GCA_001697165.1	GCA_001697165.1_00763	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP012393.1	776959	778338
GCA_001697165.1	GCA_001697165.1_01531	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP012393.1	1563073	1563978
GCA_001697165.1	GCA_001697165.1_01658	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP012393.1	1697896	1699134
GCA_001697165.1	GCA_001697165.1_01659	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP012393.1	1699542	1700174
GCA_001697165.1	GCA_001697165.1_01661	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP012393.1	1700999	1702567
GCA_001697165.1	GCA_001697165.1_01872	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP012393.1	1917651	1919177
GCA_026782505.1	GCA_026782505.1_00705	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKUWQ010000002.1	454054	454482
GCA_021728465.1	GCA_021728465.1_00692	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKKDY010000014.1	11	856
GCA_021728465.1	GCA_021728465.1_00693	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKKDY010000014.1	963	2720
GCA_021728465.1	GCA_021728465.1_00694	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKKDY010000014.1	2710	3090
GCA_021728465.1	GCA_021728465.1_00720	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKKDY010000015.1	1107	2747
GCA_021728465.1	GCA_021728465.1_00742	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAKKDY010000017.1	1172	2551
GCA_019704095.1	GCA_019704095.1_00124	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	272	284	96.13	57.14	273	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	AP024308.1	141066	141884
GCA_019704095.1	GCA_019704095.1_01449	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	220	212	96.70	46.12	206	CAC86907.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	AP024308.1	1531862	1532524
GCA_019704095.1	GCA_019704095.1_01450	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AP024308.1	1532575	1533996
GCA_019704095.1	GCA_019704095.1_01591	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP024308.1	1705433	1705834
GCA_019704095.1	GCA_019704095.1_02214	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.12	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP024308.1	2352449	2352859
GCA_900445265.1	GCA_900445265.1_01320	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UFTA01000002.1	1340438	1342078
GCA_900445265.1	GCA_900445265.1_01648	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	123	100.00	51.59	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UFTA01000002.1	1689432	1689800
GCA_905071805.1	GCA_905071805.1_00787	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.60	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAJHJL010000003.1	97005	98648
GCA_905071805.1	GCA_905071805.1_01651	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	123	100.00	45.60	125	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAJHJL010000010.1	50813	51187
GCA_000740035.1	GCA_000740035.1_00090	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	BBJZ01000038.1	217	672
GCA_000740035.1	GCA_000740035.1_00091	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	CAA70196.1	mercuric transport protein MerT	NA	NA	BBJZ01000038.1	744	1094
GCA_000740035.1	GCA_000740035.1_00092	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	94.51	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	BBJZ01000038.1	1110	1385
GCA_000740035.1	GCA_000740035.1_00093	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	135	140	98.57	78.99	138	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	BBJZ01000038.1	1413	1820
GCA_000740035.1	GCA_000740035.1_00094	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	99.47	89.78	558	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BBJZ01000038.1	1859	3541
GCA_000740035.1	GCA_000740035.1_00095	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	BBJZ01000038.1	3559	3924
GCA_000740035.1	GCA_000740035.1_00096	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	93.59	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	BBJZ01000038.1	3921	4157
GCA_000740035.1	GCA_000740035.1_00379	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	239	275	85.82	65.68	236	WP_117407753.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	BBJZ01000031.1	39786	40505
GCA_000740035.1	GCA_000740035.1_02780	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	302	97.02	52.70	296	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	BBJZ01000008.1	24189	25094
GCA_001679345.1	GCA_001679345.1_01616	blaBRO-2	class A beta-lactamase BRO-2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003665544.1	class A beta-lactamase BRO-2	NF033103.1	class A beta-lactamase	LZYD01000008.1	102658	103599
GCA_003942485.1	GCA_003942485.1_00098	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJND01000001.1	86419	87882
GCA_003942485.1	GCA_003942485.1_00099	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJND01000001.1	88002	89219
GCA_022815485.1	GCA_022815485.1_01323	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALGYO010000013.1	16862	18406
GCA_022815485.1	GCA_022815485.1_01324	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALGYO010000013.1	18590	19150
GCA_022815485.1	GCA_022815485.1_01327	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALGYO010000013.1	20936	21316
GCA_022815485.1	GCA_022815485.1_01328	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALGYO010000013.1	21306	23063
GCA_022815485.1	GCA_022815485.1_01329	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALGYO010000013.1	23170	24015
GCA_022815485.1	GCA_022815485.1_01341	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JALGYO010000014.1	10339	11325
GCA_022815485.1	GCA_022815485.1_01342	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JALGYO010000014.1	11425	13431
GCA_022815485.1	GCA_022815485.1_01696	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALGYO010000002.1	287531	288823
GCA_022815485.1	GCA_022815485.1_01722	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JALGYO010000020.1	2210	2608
GCA_022815485.1	GCA_022815485.1_01723	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JALGYO010000020.1	2831	3574
GCA_022815485.1	GCA_022815485.1_01725	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JALGYO010000021.1	268	3342
GCA_022815485.1	GCA_022815485.1_02466	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JALGYO010000008.1	12657	13154
GCA_030180995.1	GCA_030180995.1_02296	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JARWMS010000002.1	6359	7174
GCA_030180995.1	GCA_030180995.1_02297	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JARWMS010000002.1	7235	8038
GCA_030180995.1	GCA_030180995.1_02298	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JARWMS010000002.1	8038	8874
GCA_030180995.1	GCA_030180995.1_02299	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JARWMS010000002.1	9376	10236
GCA_963392955.1	GCA_963392955.1_00146	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJOC010000001.1	131689	133068
GCA_963392955.1	GCA_963392955.1_00408	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJOC010000003.1	22346	23872
GCA_963392955.1	GCA_963392955.1_00667	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJOC010000004.1	138318	139181
GCA_963392955.1	GCA_963392955.1_00668	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJOC010000004.1	139198	140436
GCA_963392955.1	GCA_963392955.1_01878	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJOC010000020.1	18600	19505
GCA_001725695.1	GCA_001725695.1_00602	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	140	137	88.32	49.60	125	WP_012695486.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	MEGA01000012.1	37133	37555
GCA_001435015.1	GCA_001435015.1_00937	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	99.80	87.37	491	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AZET01000030.1	170	1648
GCA_005890355.1	GCA_005890355.1_00167	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	99.20	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQO01000012.1	102213	103346
GCA_005890355.1	GCA_005890355.1_01950	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	SOQO01000077.1	146946	148163
GCA_005890355.1	GCA_005890355.1_01951	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	SOQO01000077.1	148184	149647
GCA_001019115.2	GCA_001019115.2_00079	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	522	522	100.00	99.81	522	WP_032492560.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	JYAQ02000003.1	17059	18627
GCA_001019115.2	GCA_001019115.2_02276	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JYAQ02000006.1	1209568	1210860
GCA_001019115.2	GCA_001019115.2_02420	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JYAQ02000006.1	1358539	1358886
GCA_001019115.2	GCA_001019115.2_02424	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JYAQ02000006.1	1362569	1363861
GCA_001019115.2	GCA_001019115.2_02472	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JYAQ02000006.1	1409031	1409681
GCA_001019115.2	GCA_001019115.2_02473	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	547	547	100.00	99.82	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JYAQ02000006.1	1409763	1411406
GCA_936914865.1	GCA_936914865.1_00072	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CAKZGF010000005.1	443	1246
GCA_936914865.1	GCA_936914865.1_00073	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CAKZGF010000005.1	1246	2082
GCA_936914865.1	GCA_936914865.1_00074	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CAKZGF010000005.1	2286	3461
GCA_936914865.1	GCA_936914865.1_00081	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.26	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAKZGF010000005.1	8707	10131
GCA_001115245.1	GCA_001115245.1_01430	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CMGD01000019.1	15648	17567
GCA_001115245.1	GCA_001115245.1_02109	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	98.48	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CMGD01000046.1	12344	13765
GCA_028326545.1	GCA_028326545.1_00218	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMMY010000013.1	49644	51563
GCA_028326545.1	GCA_028326545.1_01784	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMMY010000007.1	70517	71248
GCA_003966605.1	GCA_003966605.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	AP018586.1	37016	39022
GCA_003966605.1	GCA_003966605.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	AP018586.1	39122	40108
GCA_003966605.1	GCA_003966605.1_00133	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	69.06	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AP018586.1	154459	154896
GCA_003966605.1	GCA_003966605.1_00202	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AP018586.1	246739	247812
GCA_003966605.1	GCA_003966605.1_00212	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	AP018586.1	255581	257020
GCA_003966605.1	GCA_003966605.1_00960	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AP018586.1	998843	999223
GCA_003966605.1	GCA_003966605.1_00961	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	94.70	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AP018586.1	999213	1000970
GCA_003966605.1	GCA_003966605.1_00962	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AP018586.1	1001077	1001922
GCA_003966605.1	GCA_003966605.1_00987	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AP018586.1	1027710	1028555
GCA_003966605.1	GCA_003966605.1_00988	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.49	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AP018586.1	1028662	1030419
GCA_003966605.1	GCA_003966605.1_00989	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AP018586.1	1030409	1030789
GCA_003966605.1	GCA_003966605.1_00991	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP018586.1	1031095	1032384
GCA_003966605.1	GCA_003966605.1_01259	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	AP018586.1	1291730	1292512
GCA_003966605.1	GCA_003966605.1_01260	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	AP018586.1	1292638	1293369
GCA_013010095.1	GCA_013010095.1_00648	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP046426.1	726591	728516
GCA_013010095.1	GCA_013010095.1_02291	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	90.67	52.94	272	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP046426.1	2690360	2691319
GCA_013010095.1	GCA_013010095.1_04223	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	PARTIALP	191	266	69.55	99.46	185	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NA	NA	CP046426.1	5004403	5004978
GCA_013010095.1	GCA_013010095.1_04225	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.55	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP046426.1	5006525	5008450
GCA_003943295.1	GCA_003943295.1_01585	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJPC01000005.1	155947	156375
GCA_000463015.1	GCA_000463015.1_03337	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	295	99.32	72.39	297	WP_063842263.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP003911.1	3527883	3528782
GCA_000463015.1	GCA_000463015.1_06712	aac(3)-I	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	159	165	89.09	65.31	147	WP_063840260.1	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP003912.1	1275223	1275702
GCA_025149095.1	GCA_025149095.1_02447	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXRZ010000006.1	5568	6968
GCA_902483045.1	GCA_902483045.1_00301	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CABTBH010000001.1	343767	344732
GCA_902483045.1	GCA_902483045.1_00371	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CABTBH010000002.1	54926	56122
GCA_003201715.1	GCA_003201715.1_02723	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	QJJX01000062.1	181	1146
GCA_024758405.1	GCA_024758405.1_02383	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.33	76.12	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103075.1	3141944	3142825
GCA_024758405.1	GCA_024758405.1_02791	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP103075.1	3586444	3586770
GCA_024758405.1	GCA_024758405.1_04002	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	443	443	100.00	100.00	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103075.1	5029186	5030517
GCA_003490595.1	GCA_003490595.1_01760	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.12	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQGY01000011.1	4882	6276
GCA_000211375.1	GCA_000211375.1_01288	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.16	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP002652.1	1252251	1254365
GCA_000211375.1	GCA_000211375.1_02536	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	111	107	96.26	53.33	105	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP002653.1	7480	7815
GCA_017167265.1	GCA_017167265.1_00488	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFDQD010000001.1	7367	8791
GCA_000318115.1	GCA_000318115.1_01495	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.85	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KB290796.1	2485	3963
GCA_018323945.1	GCA_018323945.1_02166	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	105	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	AP024589.1	2128527	2128844
GCA_018323945.1	GCA_018323945.1_02167	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.83	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP024589.1	2128841	2130130
GCA_018323945.1	GCA_018323945.1_02168	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	AP024589.1	2130148	2130543
GCA_000195955.2	GCA_000195955.2_00281	aac(2)-Ic	aminoglycoside N-acetyltransferase AAC(2)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	181	181	100.00	100.00	181	WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	NF000034.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	AL123456.3	314309	314854
GCA_000195955.2	GCA_000195955.2_02099	erm(37)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	150	179	83.80	99.33	150	WP_003900446.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	NA	NA	AL123456.3	2231767	2232219
GCA_000195955.2	GCA_000195955.2_02183	blaC	class A beta-lactamase BlaC	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	307	307	100.00	100.00	307	WP_003410677.1	class A beta-lactamase BlaC	NF041154.1	class A beta-lactamase BlaC	AL123456.3	2325886	2326809
GCA_018127925.1	GCA_018127925.1_01203	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072348.1	1388430	1389620
GCA_018127925.1	GCA_018127925.1_01598	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP072348.1	1861134	1863059
GCA_018127925.1	GCA_018127925.1_01738	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP072347.1	126426	127226
GCA_018127925.1	GCA_018127925.1_02037	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP072347.1	503157	504122
GCA_905232535.2	GCA_905232535.2_00257	dfrA14	trimethoprim-resistant dihydrofolate reductase DfrA14	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	157	157	100.00	100.00	157	WP_004201280.1	trimethoprim-resistant dihydrofolate reductase DfrA14	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	OW849188.1	250399	250872
GCA_905232535.2	GCA_905232535.2_00261	aac(6)-Ib-cr	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr	core	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	BLASTP	199	184	100.00	100.00	184	WP_063840321.1	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr5	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	OW849188.1	253390	253989
GCA_905232535.2	GCA_905232535.2_00262	blaOXA-1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	276	276	100.00	100.00	276	WP_001334766.1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NF000388.2	OXA-1 family class D beta-lactamase	OW849188.1	254120	254950
GCA_905232535.2	GCA_905232535.2_00263	catB3	type B-3 chloramphenicol O-acetyltransferase CatB3	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	PARTIALP	182	210	70.00	100.00	147	WP_000186237.1	type B-3 chloramphenicol O-acetyltransferase CatB3	NA	NA	OW849188.1	255088	255636
GCA_905232535.2	GCA_905232535.2_00265	aac(3)-IIe	aminoglycoside N-acetyltransferase AAC(3)-IIe	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	EXACTP	286	286	100.00	100.00	286	WP_000557452.1	aminoglycoside N-acetyltransferase AAC(3)-IIe	NF033080.0	AAC(3)-II family aminoglycoside N-acetyltransferase	OW849188.1	256393	257253
GCA_905232535.2	GCA_905232535.2_00272	blaCTX-M-15	extended-spectrum class A beta-lactamase CTX-M-15	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_000239590.1	extended-spectrum class A beta-lactamase CTX-M-15	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	OW849188.1	262407	263282
GCA_905232535.2	GCA_905232535.2_01248	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	96.95	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	OW849188.1	1245548	1248700
GCA_905232535.2	GCA_905232535.2_01920	blaCTX-M-15	extended-spectrum class A beta-lactamase CTX-M-15	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_000239590.1	extended-spectrum class A beta-lactamase CTX-M-15	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	OW849188.1	1951466	1952341
GCA_905232535.2	GCA_905232535.2_01927	aac(3)-IIe	aminoglycoside N-acetyltransferase AAC(3)-IIe	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	EXACTP	286	286	100.00	100.00	286	WP_000557452.1	aminoglycoside N-acetyltransferase AAC(3)-IIe	NF033080.0	AAC(3)-II family aminoglycoside N-acetyltransferase	OW849188.1	1957495	1958355
GCA_905232535.2	GCA_905232535.2_01929	catB3	type B-3 chloramphenicol O-acetyltransferase CatB3	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	PARTIALP	182	210	70.00	100.00	147	WP_000186237.1	type B-3 chloramphenicol O-acetyltransferase CatB3	NA	NA	OW849188.1	1959112	1959660
GCA_905232535.2	GCA_905232535.2_01930	blaOXA-1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	276	276	100.00	100.00	276	WP_001334766.1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NF000388.2	OXA-1 family class D beta-lactamase	OW849188.1	1959798	1960628
GCA_905232535.2	GCA_905232535.2_01931	aac(6)-Ib-cr	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr	core	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	BLASTP	199	184	100.00	100.00	184	WP_063840321.1	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr5	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	OW849188.1	1960759	1961358
GCA_905232535.2	GCA_905232535.2_01935	dfrA14	trimethoprim-resistant dihydrofolate reductase DfrA14	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	157	157	100.00	100.00	157	WP_004201280.1	trimethoprim-resistant dihydrofolate reductase DfrA14	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	OW849188.1	1963876	1964349
GCA_905232535.2	GCA_905232535.2_02410	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	225	219	97.26	62.15	214	WP_000412211.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	OW849188.1	2469955	2470632
GCA_905232535.2	GCA_905232535.2_02425	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	101	102	100.00	77.14	105	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	OW849188.1	2484474	2484779
GCA_905232535.2	GCA_905232535.2_03002	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	141	141	99.29	85.71	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	OW849188.1	3061521	3061946
GCA_905232535.2	GCA_905232535.2_03944	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	97.87	141	WP_038415208.1	fosfomycin resistance glutathione transferase FosA	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	OW849188.1	4019978	4020403
GCA_905232535.2	GCA_905232535.2_04107	blaACT	ACT family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	415	381	100.00	100.00	381	WP_032608349.1	cephalosporin-hydrolyzing class C beta-lactamase ACT-45	NF000385.4	ACT family cephalosporin-hydrolyzing class C beta-lactamase	OW849188.1	4182571	4183818
GCA_905232535.2	GCA_905232535.2_04329	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	92.36	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	OW849188.1	4383594	4384028
GCA_905232535.2	GCA_905232535.2_04330	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	OW849188.1	4384246	4385646
GCA_905232535.2	GCA_905232535.2_04331	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	OW849188.1	4385643	4386323
GCA_905232535.2	GCA_905232535.2_04332	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	OW849188.1	4386378	4387307
GCA_905232535.2	GCA_905232535.2_04333	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	OW849188.1	4387312	4387692
GCA_905232535.2	GCA_905232535.2_04334	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	OW849188.1	4387732	4388628
GCA_905232535.2	GCA_905232535.2_04335	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.50	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	OW849188.1	4388628	4390445
GCA_905232535.2	GCA_905232535.2_04338	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	95.10	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	OW849188.1	4392254	4394701
GCA_905232535.2	GCA_905232535.2_04340	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.66	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	OW849188.1	4395355	4398501
GCA_905232535.2	GCA_905232535.2_04341	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	96.28	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	OW849188.1	4398512	4399804
GCA_905232535.2	GCA_905232535.2_04342	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	97.44	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	OW849188.1	4399918	4400271
GCA_905232535.2	GCA_905232535.2_04343	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.05	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	OW849188.1	4400299	4401684
GCA_905232535.2	GCA_905232535.2_04344	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	OW849188.1	4401874	4402554
GCA_905232535.2	GCA_905232535.2_04345	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	493	491	100.00	98.37	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	OW849188.1	4402547	4404028
GCA_905232535.2	GCA_905232535.2_04346	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	EXACTP	143	143	100.00	100.00	143	AAD11743.1	silver-binding protein SilE	NA	NA	OW849188.1	4404273	4404704
GCA_905232535.2	GCA_905232535.2_04499	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	294	300	97.33	90.41	292	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	OW849188.1	4582824	4583708
GCA_905232535.2	GCA_905232535.2_04677	terW	tellurium resistance protein TerW	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	155	155	100.00	100.00	155	AAC44736.1	tellurium resistance protein TerW	NA	NA	OW849189.1	68993	69460
GCA_905232535.2	GCA_905232535.2_04684	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	193	193	100.00	100.00	193	AAA86846.1	tellurium resistance-associated protein TerZ	NA	NA	OW849189.1	76031	76612
GCA_905232535.2	GCA_905232535.2_04688	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	95.31	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	OW849189.1	79359	79937
GCA_905232535.2	GCA_905232535.2_04708	ant(2)-Ia	aminoglycoside nucleotidyltransferase ANT(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	197	177	100.00	100.00	177	WP_000381802.1	aminoglycoside nucleotidyltransferase ANT(2)-Ia	NF000064.3	aminoglycoside nucleotidyltransferase ANT(2)-Ia	OW849189.1	102197	102790
GCA_905232535.2	GCA_905232535.2_04710	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206356.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	OW849189.1	102860	103639
GCA_905232535.2	GCA_905232535.2_04711	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	OW849189.1	103803	104150
GCA_905232535.2	GCA_905232535.2_04712	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	OW849189.1	104144	104983
GCA_905232535.2	GCA_905232535.2_04714	blaCTX-M-9	extended-spectrum class A beta-lactamase CTX-M-9	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_032489926.1	extended-spectrum class A beta-lactamase CTX-M-9	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	OW849189.1	107256	108131
GCA_905232535.2	GCA_905232535.2_04720	mcr-9.2	phosphoethanolamine--lipid A transferase MCR-9.2	plus	AMR	AMR	COLISTIN	COLISTIN	ALLELEP	540	540	100.00	100.00	540	MBO4175406.1	phosphoethanolamine--lipid A transferase MCR-9.2	NF033836.1	MCR-9 family phosphoethanolamine--lipid A transferase	OW849189.1	112128	113750
GCA_905232535.2	GCA_905232535.2_04722	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	448	466	96.14	97.99	448	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	OW849189.1	114946	116292
GCA_905232535.2	GCA_905232535.2_04742	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	99.29	90.00	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	OW849189.1	131273	131698
GCA_905232535.2	GCA_905232535.2_04885	blaOXA-48	OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	265	265	100.00	100.00	265	WP_015059991.1	OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48	NF000387.2	OXA-48 family class D beta-lactamase	OW849190.1	10323	11120
GCA_022347395.1	GCA_022347395.1_00165	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.78	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRNB010000011.1	70237	71679
GCA_030180205.1	GCA_030180205.1_00407	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JARXSN010000161.1	43	879
GCA_030180205.1	GCA_030180205.1_00408	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JARXSN010000161.1	879	1682
GCA_030180205.1	GCA_030180205.1_01935	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JARXSN010000086.1	84	899
GCA_030180205.1	GCA_030180205.1_01937	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JARXSN010000086.1	2133	2993
GCA_030180205.1	GCA_030180205.1_02042	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089072.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	JARXSN010000096.1	1288	2493
GCA_004519295.1	GCA_004519295.1_00878	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	477	631	73.69	44.33	476	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	SOZH01000012.1	97515	98948
GCA_004519295.1	GCA_004519295.1_00879	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	224	218	93.12	50.98	204	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	SOZH01000012.1	98995	99669
GCA_004519295.1	GCA_004519295.1_01424	helR	RNA polymerase recycling motor ATPase HelR	plus	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	780	722	97.51	64.21	746	CCA59315.1	RNA polymerase recycling motor ATPase HelR	NF041254.1	RNA polymerase recycling motor ATPase HelR	SOZH01000003.1	79338	81680
GCA_004519295.1	GCA_004519295.1_02971	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	394	391	99.74	64.03	392	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	SOZH01000006.1	62163	63347
GCA_004519295.1	GCA_004519295.1_03893	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	136	150	84.00	51.16	129	WP_063857695.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	SOZH01000009.1	117633	118043
GCA_018884105.1	GCA_018884105.1_01137	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	86.62	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP049144.1	1186121	1187023
GCA_018884105.1	GCA_018884105.1_03336	blaCSA	CSA family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	BLASTP	375	375	100.00	98.67	375	WP_004384957.1	class C beta-lactamase CSA-2	NF033698.1	CSA family class C beta-lactamase	CP049144.1	3479946	3481073
GCA_018884105.1	GCA_018884105.1_03525	fos	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	137	135	100.00	88.89	135	WP_015741374.1	FosA family fosfomycin resistance glutathione transferase	NF000339.2	FosA family fosfomycin resistance glutathione transferase	CP049144.1	3661675	3662088
GCA_018884105.1	GCA_018884105.1_04225	cpa	omptin family outer membrane protease Cpa	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	ASR82161.1	omptin family outer membrane protease Cpa	NA	NA	CP049145.1	6350	7288
GCA_002302615.1	GCA_002302615.1_00915	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP022384.1	1022930	1023895
GCA_022569155.1	GCA_022569155.1_00245	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKP010000001.1	242010	242429
GCA_022569155.1	GCA_022569155.1_01071	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKP010000003.1	4161	5453
GCA_022569155.1	GCA_022569155.1_01207	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKP010000003.1	162236	163525
GCA_022569155.1	GCA_022569155.1_01208	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKRKP010000003.1	163543	163944
GCA_022569155.1	GCA_022569155.1_01271	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKRKP010000003.1	228501	230507
GCA_022569155.1	GCA_022569155.1_01272	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JAKRKP010000003.1	230607	232364
GCA_022569155.1	GCA_022569155.1_01273	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JAKRKP010000003.1	232364	232735
GCA_022569155.1	GCA_022569155.1_01284	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKP010000003.1	241842	242915
GCA_022569155.1	GCA_022569155.1_02560	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAKRKP010000017.1	1789	2112
GCA_001076975.1	GCA_001076975.1_02051	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JVCW01000069.1	908	1723
GCA_001076975.1	GCA_001076975.1_02100	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVCW01000073.1	3464	4906
GCA_001076975.1	GCA_001076975.1_02225	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JVCW01000082.1	322	1176
GCA_001076975.1	GCA_001076975.1_02226	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	339	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JVCW01000082.1	1341	2360
GCA_001076975.1	GCA_001076975.1_02234	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JVCW01000082.1	7810	8646
GCA_001076975.1	GCA_001076975.1_02235	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JVCW01000082.1	8646	9065
GCA_001076975.1	GCA_001076975.1_02652	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JVCW01000088.1	4449	6230
GCA_022485725.1	GCA_022485725.1_00518	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAKVET010000019.1	10788	12332
GCA_022485725.1	GCA_022485725.1_00519	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAKVET010000019.1	12516	13076
GCA_022485725.1	GCA_022485725.1_00546	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVET010000001.1	26244	27533
GCA_022485725.1	GCA_022485725.1_00550	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKVET010000001.1	31219	31566
GCA_022485725.1	GCA_022485725.1_01362	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAKVET010000034.1	1988	2473
GCA_016027775.1	GCA_016027775.1_00729	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	275	94.91	60.15	261	WP_125064048.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP065695.1	800625	801407
GCA_016027775.1	GCA_016027775.1_03052	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	79.00	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP065695.1	3238420	3240108
GCA_016027775.1	GCA_016027775.1_03053	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	65.22	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP065695.1	3240120	3240398
GCA_016027775.1	GCA_016027775.1_04725	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	302	99.34	54.93	304	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP065695.1	5105596	5106507
GCA_016027775.1	GCA_016027775.1_04755	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	268	96.64	70.66	259	WP_114268491.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP065695.1	5143116	5143916
GCA_001267865.1	GCA_001267865.1_02227	copB	copper/silver-translocating P-type ATPase CopB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	766	745	96.38	83.72	725	AFM70730.1	copper/silver-translocating P-type ATPase CopB	NA	NA	CP012384.1	2201167	2203467
GCA_001267865.1	GCA_001267865.1_02638	aac(6)-Iih	aminoglycoside N-acetyltransferase AAC(6)-Iih	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ALLELEP	183	183	100.00	100.00	183	WP_005880220.1	aminoglycoside N-acetyltransferase AAC(6)-Iih	NF000165.3	aminoglycoside 6-N-acetyltransferase	CP012384.1	2629635	2630186
GCA_001267865.1	GCA_001267865.1_03047	tcrB	copper-translocating P-type ATPase TcrB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	700	710	100.00	97.32	710	AAL05407.1	copper-translocating P-type ATPase TcrB	NA	NA	CP012385.1	142333	144435
GCA_026461745.1	GCA_026461745.1_02125	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAJNCS010000008.1	23809	24219
GCA_900450755.1	GCA_900450755.1_01221	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.41	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	UGHG01000002.1	1180252	1181646
GCA_015548615.1	GCA_015548615.1_02993	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JADMXI010000097.1	2085	2885
GCA_026782325.1	GCA_026782325.1_00782	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	321	399	80.45	90.03	321	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JAKUWH010000002.1	399727	400692
GCA_026782325.1	GCA_026782325.1_00908	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKUWH010000002.1	534134	534562
GCA_025146485.1	GCA_025146485.1_01080	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JALXNK010000002.1	233189	234043
GCA_008330885.1	GCA_008330885.1_00455	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP021725.1	457487	458866
GCA_008330885.1	GCA_008330885.1_01164	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP021725.1	1201231	1202136
GCA_008330885.1	GCA_008330885.1_01283	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.82	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP021725.1	1333155	1334393
GCA_008330885.1	GCA_008330885.1_01284	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP021725.1	1334797	1335429
GCA_008330885.1	GCA_008330885.1_01286	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP021725.1	1336253	1337821
GCA_008330885.1	GCA_008330885.1_01478	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP021725.1	1549689	1551215
GCA_000160335.2	GCA_000160335.2_00085	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100289.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP002388.1	99781	101139
GCA_000160335.2	GCA_000160335.2_00167	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP002388.1	203172	204017
GCA_000160335.2	GCA_000160335.2_00168	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP002388.1	204124	205881
GCA_000160335.2	GCA_000160335.2_00169	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP002388.1	205871	206251
GCA_000160335.2	GCA_000160335.2_00288	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP002388.1	334197	335552
GCA_000160335.2	GCA_000160335.2_01369	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	328	325	98.77	98.75	321	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP002388.1	1460399	1461385
GCA_000160335.2	GCA_000160335.2_01370	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP002388.1	1461387	1462325
GCA_000160335.2	GCA_000160335.2_01725	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP002388.1	1801476	1802768
GCA_000160335.2	GCA_000160335.2_01772	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.06	238	ABD30999.1	serine protease SplE	NA	NA	CP002388.1	1841577	1842293
GCA_000160335.2	GCA_000160335.2_01783	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP002388.1	1851278	1852033
GCA_000160335.2	GCA_000160335.2_01784	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP002388.1	1852072	1852857
GCA_000160335.2	GCA_000160335.2_01785	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP002388.1	1853011	1853739
GCA_000160335.2	GCA_000160335.2_01786	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.23	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP002388.1	1853774	1854493
GCA_000160335.2	GCA_000160335.2_01939	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP002388.1	1978725	1979075
GCA_000160335.2	GCA_000160335.2_01944	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP002388.1	1981286	1981777
GCA_000160335.2	GCA_000160335.2_02023	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP002388.1	2036675	2036809
GCA_000160335.2	GCA_000160335.2_02176	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	96.67	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP002388.1	2190271	2191713
GCA_000160335.2	GCA_000160335.2_02345	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP002388.1	2338234	2338653
GCA_000160335.2	GCA_000160335.2_02437	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP002388.1	2430983	2431948
GCA_000160335.2	GCA_000160335.2_02438	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP002388.1	2432498	2433445
GCA_000160335.2	GCA_000160335.2_02439	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP002388.1	2433447	2434424
GCA_000160335.2	GCA_000160335.2_02653	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP002388.1	2665038	2666567
GCA_000160335.2	GCA_000160335.2_02688	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	303	350	81.71	98.95	286	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP002388.1	2708701	2709612
GCA_000160335.2	GCA_000160335.2_02711	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.97	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP002388.1	2731056	2734607
GCA_000160335.2	GCA_000160335.2_02744	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	216	216	100.00	100.00	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP002389.1	4433	5083
GCA_000160335.2	GCA_000160335.2_02745	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	365	547	66.73	99.73	365	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP002389.1	5165	6262
GCA_000160335.2	GCA_000160335.2_02747	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	128	128	100.00	100.00	128	ADA79992.1	mercuric transport protein MerT	NA	NA	CP002389.1	6866	7252
GCA_000160335.2	GCA_000160335.2_02754	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	EXACTP	122	122	100.00	100.00	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP002389.1	13110	13478
GCA_000160335.2	GCA_000160335.2_02757	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP002389.1	15356	15751
GCA_000160335.2	GCA_000160335.2_02758	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	429	429	100.00	100.00	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP002389.1	15769	17058
GCA_000160335.2	GCA_000160335.2_02759	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	104	104	100.00	100.00	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP002389.1	17058	17372
GCA_000368765.1	GCA_000368765.1_00608	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	98.74	79.08	392	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	KB849654.1	304372	305565
GCA_000368765.1	GCA_000368765.1_02104	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	950	949	99.79	95.78	947	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	KB849655.1	972194	975046
GCA_000368765.1	GCA_000368765.1_02931	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	409	392	100.00	75.38	394	WP_430673475.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	KB849655.1	1851118	1852347
GCA_000368765.1	GCA_000368765.1_03180	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001279068.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	KB849659.1	105599	106387
GCA_030218885.1	GCA_030218885.1_00242	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASOQP010000013.1	34812	36104
GCA_030218885.1	GCA_030218885.1_00246	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASOQP010000013.1	39787	40134
GCA_030218885.1	GCA_030218885.1_00982	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JASOQP010000030.1	1190	2569
GCA_030218885.1	GCA_030218885.1_01011	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JASOQP010000021.1	1798	3264
GCA_030218885.1	GCA_030218885.1_01032	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JASOQP010000032.1	286	1029
GCA_030218885.1	GCA_030218885.1_01033	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JASOQP010000032.1	1246	1650
GCA_030218885.1	GCA_030218885.1_01365	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASOQP010000002.1	288180	289472
GCA_030218885.1	GCA_030218885.1_01391	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASOQP010000035.1	12	857
GCA_030218885.1	GCA_030218885.1_01392	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASOQP010000035.1	964	2721
GCA_030218885.1	GCA_030218885.1_01393	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASOQP010000035.1	2711	3091
GCA_902481245.1	GCA_902481245.1_00547	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	97.92	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CABSWF010000072.1	770	2506
GCA_902481245.1	GCA_902481245.1_00548	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	99.48	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CABSWF010000072.1	2508	4232
GCA_000238795.2	GCA_000238795.2_00793	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	AFNK01000044.1	150	1010
GCA_000238795.2	GCA_000238795.2_00811	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AFNK01000037.1	5274	6914
GCA_000238795.2	GCA_000238795.2_01431	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	252	267	94.38	99.60	252	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	AFNK01000027.1	426	1184
GCA_000238795.2	GCA_000238795.2_01432	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	AFNK01000027.1	1184	2020
GCA_000238795.2	GCA_000238795.2_01448	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089072.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	AFNK01000012.1	371	1576
GCA_024462755.1	GCA_024462755.1_00297	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JANGBY010000011.1	57106	57837
GCA_024462755.1	GCA_024462755.1_01306	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.06	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JANGBY010000035.1	8630	10108
GCA_024462755.1	GCA_024462755.1_01834	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JANGBY010000008.1	70785	72704
GCA_018127745.1	GCA_018127745.1_01702	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	43.27	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP072333.1	2114631	2114957
GCA_900454715.1	GCA_900454715.1_01181	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.26	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	UGSZ01000001.1	1182984	1184462
GCA_900454715.1	GCA_900454715.1_01222	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	UGSZ01000001.1	1221929	1223848
GCA_962747925.1	GCA_962747925.1_00294	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJAF010000002.1	115798	117177
GCA_962747925.1	GCA_962747925.1_00440	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJAF010000003.1	84150	85388
GCA_962747925.1	GCA_962747925.1_00441	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJAF010000003.1	85641	86273
GCA_962747925.1	GCA_962747925.1_00667	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJAF010000005.1	21454	22359
GCA_962747925.1	GCA_962747925.1_01080	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJAF010000009.1	42897	44423
GCA_030175865.1	GCA_030175865.1_00546	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUA010000019.1	807	1661
GCA_003454775.1	GCA_003454775.1_00248	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP031971.1	259143	261062
GCA_001697705.1	GCA_001697705.1_00399	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016664.1	451615	452853
GCA_001697705.1	GCA_001697705.1_00400	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016664.1	453261	453893
GCA_001697705.1	GCA_001697705.1_00402	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016664.1	454718	456286
GCA_001697705.1	GCA_001697705.1_00603	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016664.1	666773	668299
GCA_001697705.1	GCA_001697705.1_01658	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016664.1	1741157	1742536
GCA_000253135.1	GCA_000253135.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	FR714927.1	40197	40601
GCA_000253135.1	GCA_000253135.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	FR714927.1	40818	41561
GCA_000253135.1	GCA_000253135.1_00094	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	FR714927.1	110867	112225
GCA_000253135.1	GCA_000253135.1_00125	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	FR714927.1	146060	146842
GCA_000253135.1	GCA_000253135.1_00126	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	FR714927.1	146968	147699
GCA_000253135.1	GCA_000253135.1_00297	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	FR714927.1	346304	347659
GCA_000253135.1	GCA_000253135.1_00334	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	FR714927.1	380967	381578
GCA_000253135.1	GCA_000253135.1_01669	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	FR714927.1	1777347	1778639
GCA_000253135.1	GCA_000253135.1_01707	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	FR714927.1	1808895	1809617
GCA_000253135.1	GCA_000253135.1_01708	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	FR714927.1	1809742	1810449
GCA_000253135.1	GCA_000253135.1_01713	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	FR714927.1	1814580	1815563
GCA_000253135.1	GCA_000253135.1_01714	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	FR714927.1	1815565	1816485
GCA_000253135.1	GCA_000253135.1_01722	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	FR714927.1	1822701	1823456
GCA_000253135.1	GCA_000253135.1_01723	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	FR714927.1	1823495	1823890
GCA_000253135.1	GCA_000253135.1_01725	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	FR714927.1	1824420	1825148
GCA_000253135.1	GCA_000253135.1_01726	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	FR714927.1	1825183	1825902
GCA_000253135.1	GCA_000253135.1_01727	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	FR714927.1	1826183	1826947
GCA_000253135.1	GCA_000253135.1_01881	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	FR714927.1	1951679	1952029
GCA_000253135.1	GCA_000253135.1_01886	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	FR714927.1	1954237	1954728
GCA_000253135.1	GCA_000253135.1_01890	sep	staphylococcal enterotoxin type P	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	260	260	100.00	100.00	260	ADC38120.1	staphylococcal enterotoxin type P	NA	NA	FR714927.1	1956531	1957313
GCA_000253135.1	GCA_000253135.1_01960	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	FR714927.1	2008578	2008712
GCA_000253135.1	GCA_000253135.1_02105	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	FR714927.1	2160433	2161875
GCA_000253135.1	GCA_000253135.1_02278	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	FR714927.1	2312279	2312698
GCA_000253135.1	GCA_000253135.1_02362	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	FR714927.1	2401012	2401977
GCA_000253135.1	GCA_000253135.1_02363	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	FR714927.1	2402544	2403491
GCA_000253135.1	GCA_000253135.1_02364	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	FR714927.1	2403493	2404470
GCA_000253135.1	GCA_000253135.1_02589	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	FR714927.1	2642725	2644254
GCA_000253135.1	GCA_000253135.1_02623	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	FR714927.1	2687584	2688636
GCA_000253135.1	GCA_000253135.1_02668	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	FR714928.1	164	487
GCA_000253135.1	GCA_000253135.1_02672	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	209	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	FR714929.1	1749	2378
GCA_000253135.1	GCA_000253135.1_02683	sed	staphylococcal enterotoxin type D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	258	258	100.00	99.61	258	AAB06195.1	staphylococcal enterotoxin type D	NA	NA	FR714929.1	12682	13458
GCA_000253135.1	GCA_000253135.1_02686	sej	staphylococcal enterotoxin type J	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	268	268	100.00	100.00	268	AAC78590.1	staphylococcal enterotoxin type J	NA	NA	FR714929.1	14353	15159
GCA_000253135.1	GCA_000253135.1_02687	ser	staphylococcal enterotoxin type R	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	259	259	100.00	99.61	259	EVY93839.1	staphylococcal enterotoxin type R	NA	NA	FR714929.1	15249	16028
GCA_000253135.1	GCA_000253135.1_02693	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	FR714929.1	20022	20402
GCA_000253135.1	GCA_000253135.1_02694	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	FR714929.1	20392	22149
GCA_000253135.1	GCA_000253135.1_02695	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	FR714929.1	22256	23101
GCA_016599795.1	GCA_016599795.1_00069	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	98.86	53.31	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP067014.1	69901	70968
GCA_016599795.1	GCA_016599795.1_00412	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP067014.1	448998	450290
GCA_016599795.1	GCA_016599795.1_00916	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP067014.1	911460	912305
GCA_016599795.1	GCA_016599795.1_00917	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP067014.1	912412	914169
GCA_016599795.1	GCA_016599795.1_00918	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP067014.1	914159	914539
GCA_016599795.1	GCA_016599795.1_01945	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP067014.1	1938864	1939283
GCA_024105025.1	GCA_024105025.1_01494	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.85	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDUA010000030.1	2110	2520
GCA_030176675.1	GCA_030176675.1_01083	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUX010000003.1	151147	152001
GCA_001812205.1	GCA_001812205.1_00283	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV808290.1	167864	169504
GCA_001812205.1	GCA_001812205.1_01465	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	639	99.84	98.59	638	WP_050618045.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV808304.1	7348	9270
GCA_001812205.1	GCA_001812205.1_01468	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.24	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV808304.1	11286	12140
GCA_900453905.1	GCA_900453905.1_01041	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	UATC01000019.1	10933	12501
GCA_029023865.1	GCA_029023865.1_01282	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	131	121	100.00	50.37	135	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP118969.1	1241114	1241509
GCA_030228965.1	GCA_030228965.1_02058	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPIK010000006.1	128314	129168
GCA_003862475.1	GCA_003862475.1_01361	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RRCO01000002.1	524812	526731
GCA_003862475.1	GCA_003862475.1_01909	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	PARTIALP	293	492	57.11	94.31	281	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NA	NA	RRCO01000004.1	172010	172891
GCA_003862475.1	GCA_003862475.1_01936	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	517	492	100.00	93.29	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	RRCO01000004.1	187796	189349
GCA_003862475.1	GCA_003862475.1_02143	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	RRCO01000005.1	34929	35351
GCA_009791315.1	GCA_009791315.1_00415	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.13	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	WSYI01000017.1	8125	9558
GCA_009791315.1	GCA_009791315.1_01642	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	WSYI01000003.1	67931	68332
GCA_009791315.1	GCA_009791315.1_01643	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	WSYI01000003.1	68350	69639
GCA_009791315.1	GCA_009791315.1_01644	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	WSYI01000003.1	69639	69953
GCA_009791315.1	GCA_009791315.1_02375	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.25	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	WSYI01000008.1	40309	41601
GCA_000193795.2	GCA_000193795.2_01040	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	AEPI01000044.1	5433	7001
GCA_000193795.2	GCA_000193795.2_01042	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	AEPI01000044.1	7642	8505
GCA_000193795.2	GCA_000193795.2_01043	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.15	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	AEPI01000044.1	8522	9760
GCA_000193795.2	GCA_000193795.2_01650	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	99.41	95.25	505	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	AEPI01000027.1	33407	34933
GCA_000193795.2	GCA_000193795.2_01983	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.34	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	AEPI01000019.1	62498	63877
GCA_022689125.1	GCA_022689125.1_00691	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXY010000019.1	3735	5024
GCA_022689125.1	GCA_022689125.1_00692	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALCXY010000019.1	5042	5443
GCA_022689125.1	GCA_022689125.1_01331	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXY010000002.1	242288	242707
GCA_022689125.1	GCA_022689125.1_02015	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXY010000006.1	4239	5531
GCA_022689125.1	GCA_022689125.1_02157	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXY010000007.1	10180	11253
GCA_030585185.1	GCA_030585185.1_01734	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	305	97.38	53.87	297	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP126029.1	1848679	1849578
GCA_030585185.1	GCA_030585185.1_01795	blaBJP	BJP family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	295	294	99.66	84.30	293	WP_011088970.1	BJP family subclass B3 metallo-beta-lactamase	NF012140.0	BJP family subclass B3 metallo-beta-lactamase	CP126029.1	1919585	1920472
GCA_030585185.1	GCA_030585185.1_05030	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	270	272	99.26	69.26	270	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP126029.1	5249452	5250264
GCA_020882195.1	GCA_020882195.1_00114	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP048008.1	69283	70014
GCA_020882195.1	GCA_020882195.1_00115	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP048008.1	70140	70922
GCA_020882195.1	GCA_020882195.1_00387	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP048008.1	364518	365591
GCA_020882195.1	GCA_020882195.1_00402	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP048008.1	378357	380363
GCA_020882195.1	GCA_020882195.1_00403	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP048008.1	380463	382220
GCA_020882195.1	GCA_020882195.1_00404	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP048008.1	382220	382591
GCA_020882195.1	GCA_020882195.1_00414	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP048008.1	390659	391390
GCA_020882195.1	GCA_020882195.1_00415	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP048008.1	391516	392298
GCA_020882195.1	GCA_020882195.1_00434	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	137	131	90.84	92.44	119	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP048008.1	408856	409269
GCA_020882195.1	GCA_020882195.1_00580	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP048008.1	564635	565927
GCA_020882195.1	GCA_020882195.1_00740	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP048008.1	720616	720996
GCA_020882195.1	GCA_020882195.1_00741	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP048008.1	720986	722743
GCA_020882195.1	GCA_020882195.1_00742	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP048008.1	722850	723695
GCA_020882195.1	GCA_020882195.1_01508	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP048008.1	1502673	1503467
GCA_020882195.1	GCA_020882195.1_01514	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP048008.1	1506677	1508116
GCA_020882195.1	GCA_020882195.1_01597	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP048008.1	1567639	1568280
GCA_020882195.1	GCA_020882195.1_01887	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP048008.1	1832233	1833015
GCA_020882195.1	GCA_020882195.1_01888	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP048008.1	1833141	1833872
GCA_020882195.1	GCA_020882195.1_02633	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP048008.1	2584202	2584621
GCA_022660955.1	GCA_022660955.1_00674	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKEZL010000001.1	702307	703599
GCA_022660955.1	GCA_022660955.1_00807	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKEZL010000001.1	846186	847259
GCA_022660955.1	GCA_022660955.1_01907	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKEZL010000006.1	42866	43285
GCA_001697345.1	GCA_001697345.1_00050	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016646.1	51373	52611
GCA_001697345.1	GCA_001697345.1_00051	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016646.1	53015	53647
GCA_001697345.1	GCA_001697345.1_00053	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016646.1	54472	56040
GCA_001697345.1	GCA_001697345.1_00247	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.82	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016646.1	257541	259067
GCA_001697345.1	GCA_001697345.1_01333	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016646.1	1324661	1326040
GCA_001697345.1	GCA_001697345.1_02087	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016646.1	2090618	2091523
GCA_001269845.1	GCA_001269845.1_01677	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	256	267	96.25	56.81	257	WP_012479999.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	LHVP01000011.1	1361829	1362599
GCA_001269845.1	GCA_001269845.1_04144	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	99.26	63.70	135	WP_015741374.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	LHVP01000006.1	821576	821986
GCA_001269845.1	GCA_001269845.1_05178	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	380	397	94.21	58.82	374	WP_104009838.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	LHVP01000009.1	51510	52652
GCA_001269845.1	GCA_001269845.1_05623	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	413	100.00	80.05	416	CAK15125.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	LHVP01000009.1	568298	569539
GCA_000252225.2	GCA_000252225.2_01253	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417517.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AILI01000002.1	58707	59924
GCA_000252225.2	GCA_000252225.2_01254	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420317.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AILI01000002.1	60044	61507
GCA_000252225.2	GCA_000252225.2_01273	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AILI01000002.1	74688	75887
GCA_002096855.1	GCA_002096855.1_01240	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	NCVH01000031.1	260078	261277
GCA_021378725.1	GCA_021378725.1_01616	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP089338.1	1878549	1879343
GCA_021378725.1	GCA_021378725.1_02653	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_009305318.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP089338.1	3059146	3061065
GCA_024655805.1	GCA_024655805.1_00147	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JANLGH010000013.1	16143	17687
GCA_024655805.1	GCA_024655805.1_00148	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JANLGH010000013.1	17871	18431
GCA_024655805.1	GCA_024655805.1_00151	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JANLGH010000013.1	20222	20602
GCA_024655805.1	GCA_024655805.1_00152	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JANLGH010000013.1	20592	22349
GCA_024655805.1	GCA_024655805.1_00153	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JANLGH010000013.1	22456	23301
GCA_024655805.1	GCA_024655805.1_00163	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JANLGH010000017.1	397	1131
GCA_024655805.1	GCA_024655805.1_01418	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JANLGH010000002.1	287900	289192
GCA_024655805.1	GCA_024655805.1_02430	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JANLGH010000009.1	36865	38157
GCA_024655805.1	GCA_024655805.1_02434	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANLGH010000009.1	41840	42187
GCA_015551585.1	GCA_015551585.1_00468	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADNDA010000001.1	301836	303299
GCA_015551585.1	GCA_015551585.1_00469	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADNDA010000001.1	303419	304636
GCA_000383005.1	GCA_000383005.1_00033	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	HE579073.1	38533	40539
GCA_000383005.1	GCA_000383005.1_00034	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	HE579073.1	40639	41625
GCA_000383005.1	GCA_000383005.1_00108	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	HE579073.1	127361	128719
GCA_000383005.1	GCA_000383005.1_00304	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	HE579073.1	355719	357074
GCA_000383005.1	GCA_000383005.1_00341	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	HE579073.1	390387	390998
GCA_000383005.1	GCA_000383005.1_00806	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579073.1	849130	849912
GCA_000383005.1	GCA_000383005.1_00807	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579073.1	850038	850769
GCA_000383005.1	GCA_000383005.1_01585	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579073.1	1664061	1664792
GCA_000383005.1	GCA_000383005.1_01586	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579073.1	1664918	1665700
GCA_000383005.1	GCA_000383005.1_01706	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	HE579073.1	1809222	1810514
GCA_000383005.1	GCA_000383005.1_01748	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	HE579073.1	1841765	1842487
GCA_000383005.1	GCA_000383005.1_01749	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	96.60	235	ABD31004.1	serine protease SplA	NA	NA	HE579073.1	1842612	1843319
GCA_000383005.1	GCA_000383005.1_01754	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	HE579073.1	1847445	1848428
GCA_000383005.1	GCA_000383005.1_01755	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	HE579073.1	1848430	1849365
GCA_000383005.1	GCA_000383005.1_01763	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	HE579073.1	1855567	1856322
GCA_000383005.1	GCA_000383005.1_01764	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	HE579073.1	1856361	1856756
GCA_000383005.1	GCA_000383005.1_01766	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	HE579073.1	1857286	1858014
GCA_000383005.1	GCA_000383005.1_01767	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	HE579073.1	1858049	1858768
GCA_000383005.1	GCA_000383005.1_01768	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	HE579073.1	1859049	1859813
GCA_000383005.1	GCA_000383005.1_01924	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	HE579073.1	1984723	1985073
GCA_000383005.1	GCA_000383005.1_01928	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	HE579073.1	1986570	1987061
GCA_000383005.1	GCA_000383005.1_01932	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	HE579073.1	1988770	1989543
GCA_000383005.1	GCA_000383005.1_01990	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	HE579073.1	2028974	2029108
GCA_000383005.1	GCA_000383005.1_02112	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579073.1	2149940	2150671
GCA_000383005.1	GCA_000383005.1_02113	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579073.1	2150797	2151579
GCA_000383005.1	GCA_000383005.1_02143	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	PARTIALP	262	480	54.58	98.09	262	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	HE579073.1	2187937	2188725
GCA_000383005.1	GCA_000383005.1_02315	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	HE579073.1	2339070	2339489
GCA_000383005.1	GCA_000383005.1_02399	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	HE579073.1	2427656	2428621
GCA_000383005.1	GCA_000383005.1_02400	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	HE579073.1	2429188	2430135
GCA_000383005.1	GCA_000383005.1_02401	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	HE579073.1	2430137	2431114
GCA_000383005.1	GCA_000383005.1_02583	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579073.1	2617056	2617787
GCA_000383005.1	GCA_000383005.1_02584	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579073.1	2617913	2618695
GCA_000383005.1	GCA_000383005.1_02632	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	HE579073.1	2672522	2674051
GCA_000383005.1	GCA_000383005.1_02666	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	HE579073.1	2717381	2718433
GCA_000383005.1	GCA_000383005.1_02713	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	EXACTP	122	122	100.00	100.00	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	HE579074.1	3067	3435
GCA_000383005.1	GCA_000383005.1_02714	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	HE579074.1	3998	4843
GCA_000383005.1	GCA_000383005.1_02715	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	HE579074.1	4950	6707
GCA_000383005.1	GCA_000383005.1_02716	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	HE579074.1	6697	7077
GCA_000383005.1	GCA_000383005.1_02721	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	HE579074.1	9560	10120
GCA_000383005.1	GCA_000383005.1_02722	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	504	514	98.05	100.00	504	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	HE579074.1	10334	11848
GCA_901873995.1	GCA_901873995.1_00777	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CABFLW010000013.1	6636	8204
GCA_011714795.1	GCA_011714795.1_00175	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXP01000013.1	2066	3487
GCA_011714795.1	GCA_011714795.1_00495	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RXXP01000001.1	11416	13335
GCA_011714795.1	GCA_011714795.1_00532	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RXXP01000001.1	44201	45664
GCA_011714795.1	GCA_011714795.1_00533	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RXXP01000001.1	45685	46902
GCA_001815785.1	GCA_001815785.1_02563	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV821981.1	45828	47252
GCA_018224585.1	GCA_018224585.1_00211	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.64	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	JAGTUI010000013.1	1391	2917
GCA_018224585.1	GCA_018224585.1_00464	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	JAGTUI010000017.1	33972	35351
GCA_018224585.1	GCA_018224585.1_00866	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	JAGTUI010000025.1	21361	21993
GCA_018224585.1	GCA_018224585.1_00867	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.87	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	JAGTUI010000025.1	22243	23481
GCA_018224585.1	GCA_018224585.1_00990	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	JAGTUI010000002.1	9337	10242
GCA_902481605.1	GCA_902481605.1_02088	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CABSXI010000100.1	1137	3056
GCA_000263215.1	GCA_000263215.1_00109	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	86.96	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP003312.1	110941	111843
GCA_000263215.1	GCA_000263215.1_01973	fos	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	88.15	135	WP_015741374.1	FosA family fosfomycin resistance glutathione transferase	NF000339.2	FosA family fosfomycin resistance glutathione transferase	CP003312.1	2007687	2008097
GCA_000263215.1	GCA_000263215.1_02119	blaCSA	CSA family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	BLASTP	375	375	100.00	98.13	375	WP_004384957.1	class C beta-lactamase CSA-2	NF033698.1	CSA family class C beta-lactamase	CP003312.1	2159483	2160610
GCA_024799785.1	GCA_024799785.1_00383	bepE	multidrug efflux RND transporter permease subunit BepE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1049	1051	99.71	94.37	1048	AAN29241.1	multidrug efflux RND transporter permease subunit BepE	NA	NA	CP103345.1	410281	413430
GCA_024799785.1	GCA_024799785.1_00870	blaOCH	OCH family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	234	390	55.13	98.60	215	WP_029925205.1	extended-spectrum class C beta-lactamase OCH-7	NA	NA	CP103345.1	903486	904190
GCA_024799785.1	GCA_024799785.1_02199	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	266	266	100.00	72.93	266	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP103345.1	2197123	2197923
GCA_024799785.1	GCA_024799785.1_04973	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	96.05	304	APX31172.1	heat resistance protein YfdX1	NA	NA	CP103348.1	941	1855
GCA_024799785.1	GCA_024799785.1_05208	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	476	631	75.12	47.48	476	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP103349.1	63323	64753
GCA_019815155.1	GCA_019815155.1_01078	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	JAIMJK010000022.1	120238	121617
GCA_900490715.1	GCA_900490715.1_00261	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	UENJ01000001.1	246745	247482
GCA_900490715.1	GCA_900490715.1_00262	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	UENJ01000001.1	248589	250508
GCA_001838375.1	GCA_001838375.1_01878	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.30	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	KV836592.1	44697	46076
GCA_000382985.1	GCA_000382985.1_00033	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	HE579067.1	38653	40659
GCA_000382985.1	GCA_000382985.1_00034	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	HE579067.1	40759	41745
GCA_000382985.1	GCA_000382985.1_00108	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	HE579067.1	127480	128838
GCA_000382985.1	GCA_000382985.1_00307	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	HE579067.1	355710	357065
GCA_000382985.1	GCA_000382985.1_00344	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	HE579067.1	390378	390989
GCA_000382985.1	GCA_000382985.1_00806	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579067.1	849266	850048
GCA_000382985.1	GCA_000382985.1_00807	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579067.1	850174	850905
GCA_000382985.1	GCA_000382985.1_01585	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579067.1	1664197	1664928
GCA_000382985.1	GCA_000382985.1_01586	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579067.1	1665054	1665836
GCA_000382985.1	GCA_000382985.1_01706	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	HE579067.1	1809358	1810650
GCA_000382985.1	GCA_000382985.1_01747	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	HE579067.1	1841904	1842626
GCA_000382985.1	GCA_000382985.1_01748	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	96.60	235	ABD31004.1	serine protease SplA	NA	NA	HE579067.1	1842751	1843458
GCA_000382985.1	GCA_000382985.1_01753	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	HE579067.1	1847584	1848567
GCA_000382985.1	GCA_000382985.1_01754	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	HE579067.1	1848569	1849504
GCA_000382985.1	GCA_000382985.1_01762	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	HE579067.1	1855706	1856461
GCA_000382985.1	GCA_000382985.1_01763	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	HE579067.1	1856500	1856895
GCA_000382985.1	GCA_000382985.1_01765	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	HE579067.1	1857425	1858153
GCA_000382985.1	GCA_000382985.1_01766	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	HE579067.1	1858188	1858907
GCA_000382985.1	GCA_000382985.1_01767	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	HE579067.1	1859188	1859952
GCA_000382985.1	GCA_000382985.1_01923	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	HE579067.1	1984860	1985210
GCA_000382985.1	GCA_000382985.1_01927	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	HE579067.1	1986707	1987198
GCA_000382985.1	GCA_000382985.1_01931	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	HE579067.1	1988907	1989680
GCA_000382985.1	GCA_000382985.1_01990	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	HE579067.1	2029111	2029245
GCA_000382985.1	GCA_000382985.1_02112	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579067.1	2150075	2150806
GCA_000382985.1	GCA_000382985.1_02113	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579067.1	2150932	2151714
GCA_000382985.1	GCA_000382985.1_02143	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	PARTIALP	262	480	54.58	98.09	262	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	HE579067.1	2188071	2188859
GCA_000382985.1	GCA_000382985.1_02315	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	HE579067.1	2339203	2339622
GCA_000382985.1	GCA_000382985.1_02399	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	HE579067.1	2427789	2428754
GCA_000382985.1	GCA_000382985.1_02400	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	HE579067.1	2429321	2430268
GCA_000382985.1	GCA_000382985.1_02401	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	HE579067.1	2430270	2431247
GCA_000382985.1	GCA_000382985.1_02583	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE579067.1	2617185	2617916
GCA_000382985.1	GCA_000382985.1_02584	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	HE579067.1	2618042	2618824
GCA_000382985.1	GCA_000382985.1_02632	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	HE579067.1	2672651	2674180
GCA_000382985.1	GCA_000382985.1_02666	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	HE579067.1	2717510	2718562
GCA_000382985.1	GCA_000382985.1_02712	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	HE579068.1	2157	5231
GCA_000382985.1	GCA_000382985.1_02716	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003260.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	HE579068.1	7858	8592
GCA_022762925.1	GCA_022762925.1_00047	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKTNF010000011.1	9637	10482
GCA_022762925.1	GCA_022762925.1_00048	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKTNF010000011.1	10589	12346
GCA_022762925.1	GCA_022762925.1_00049	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKTNF010000011.1	12336	12716
GCA_022762925.1	GCA_022762925.1_00118	fosB6	fosfomycin resistance bacillithiol transferase FosB6	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_085562381.1	fosfomycin resistance bacillithiol transferase FosB6	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	JAKTNF010000014.1	115	534
GCA_022762925.1	GCA_022762925.1_00121	cfr	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	core	AMR	AMR	LINCOSAMIDE/OXAZOLIDINONE/PHENICOL/PLEUROMUTILIN/STREPTOGRAMIN	CHLORAMPHENICOL/CLINDAMYCIN/FLORFENICOL/LINEZOLID/STREPTOGRAMIN B/TIAMULIN/VIRGINIAMYCIN	EXACTP	349	349	100.00	100.00	349	WP_001010505.1	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	JAKTNF010000015.1	442	1491
GCA_022762925.1	GCA_022762925.1_00129	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAKTNF010000018.1	477	1916
GCA_022762925.1	GCA_022762925.1_01126	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKTNF010000002.1	250348	251421
GCA_022762925.1	GCA_022762925.1_01237	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKTNF010000002.1	393246	394535
GCA_022762925.1	GCA_022762925.1_01238	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKTNF010000002.1	394553	394954
GCA_022762925.1	GCA_022762925.1_01285	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKTNF010000002.1	435490	437496
GCA_022762925.1	GCA_022762925.1_02316	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKTNF010000006.1	60473	61762
GCA_000286595.1	GCA_000286595.1_00203	blaOXA-814	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-814	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	273	273	100.00	100.00	273	WP_005405613.1	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-814	NF000266.2	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase	ALIR01000002.1	45678	46499
GCA_000286595.1	GCA_000286595.1_01456	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	287	285	97.54	40.85	284	WP_063864745.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	ALIR01000007.1	124617	125480
GCA_000286595.1	GCA_000286595.1_02216	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	397	97.98	77.38	389	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	ALIR01000008.1	496543	497730
GCA_021442105.1	GCA_021442105.1_00065	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP090475.1	66904	67218
GCA_021442105.1	GCA_021442105.1_00066	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP090475.1	67218	68507
GCA_021442105.1	GCA_021442105.1_00067	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP090475.1	68525	68926
GCA_021442105.1	GCA_021442105.1_00133	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP090475.1	125679	127685
GCA_021442105.1	GCA_021442105.1_00235	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP090475.1	217361	218653
GCA_021442105.1	GCA_021442105.1_00286	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP090475.1	272228	272725
GCA_021442105.1	GCA_021442105.1_01979	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP090475.1	1951550	1952989
GCA_021442105.1	GCA_021442105.1_02509	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP090475.1	2468557	2469402
GCA_021442105.1	GCA_021442105.1_02510	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP090475.1	2469509	2471266
GCA_021442105.1	GCA_021442105.1_02511	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP090475.1	2471256	2471636
GCA_000684935.1	GCA_000684935.1_00285	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	141	141	100.00	86.52	141	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	BAWU01000058.1	14939	15364
GCA_000684935.1	GCA_000684935.1_01089	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	491	491	99.80	98.98	490	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	BAWU01000035.1	5303	6778
GCA_000684935.1	GCA_000684935.1_01090	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	BAWU01000035.1	6771	7451
GCA_000684935.1	GCA_000684935.1_01091	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.26	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	BAWU01000035.1	7641	9026
GCA_000684935.1	GCA_000684935.1_01092	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	BAWU01000035.1	9055	9408
GCA_000684935.1	GCA_000684935.1_01093	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	98.37	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	BAWU01000035.1	9522	10814
GCA_000684935.1	GCA_000684935.1_01094	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	99.43	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	BAWU01000035.1	10825	13971
GCA_000684935.1	GCA_000684935.1_01096	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	813	824	98.79	98.28	814	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	BAWU01000035.1	14626	17067
GCA_000684935.1	GCA_000684935.1_01100	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	EXACTP	605	605	100.00	100.00	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	BAWU01000035.1	18378	20195
GCA_000684935.1	GCA_000684935.1_01101	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	BAWU01000035.1	20195	21091
GCA_000684935.1	GCA_000684935.1_01102	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	BAWU01000035.1	21131	21511
GCA_000684935.1	GCA_000684935.1_01103	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	BAWU01000035.1	21516	22445
GCA_000684935.1	GCA_000684935.1_01104	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	BAWU01000035.1	22500	23180
GCA_000684935.1	GCA_000684935.1_01105	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.36	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	BAWU01000035.1	23177	24577
GCA_000684935.1	GCA_000684935.1_01106	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	94.44	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	BAWU01000035.1	24793	25227
GCA_000684935.1	GCA_000684935.1_01110	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	99.29	141	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	BAWU01000035.1	27774	28199
GCA_000684935.1	GCA_000684935.1_01111	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.07	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	BAWU01000035.1	28212	29501
GCA_000684935.1	GCA_000684935.1_01112	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	98.46	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	BAWU01000035.1	29549	31300
GCA_000684935.1	GCA_000684935.1_01113	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	90.83	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BAWU01000035.1	31318	31680
GCA_000684935.1	GCA_000684935.1_01114	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	116	116	100.00	98.28	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	BAWU01000035.1	31732	32082
GCA_000684935.1	GCA_000684935.1_01520	fos	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	87.41	135	WP_015741374.1	FosA family fosfomycin resistance glutathione transferase	NF000339.2	FosA family fosfomycin resistance glutathione transferase	BAWU01000028.1	39633	40043
GCA_000684935.1	GCA_000684935.1_02817	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	86.62	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	BAWU01000013.1	51104	52006
GCA_000684935.1	GCA_000684935.1_03276	blaCSA-1	class C beta-lactamase CSA-1	core	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	ALLELEP	375	375	100.00	100.00	375	WP_007888761.1	class C beta-lactamase CSA-1	NF033698.1	CSA family class C beta-lactamase	BAWU01000009.1	54169	55296
GCA_000684935.1	GCA_000684935.1_03660	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	97.58	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	BAWU01000006.1	12995	13492
GCA_000684935.1	GCA_000684935.1_03661	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	569	571	99.65	98.59	569	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	BAWU01000006.1	13495	15204
GCA_000684935.1	GCA_000684935.1_03662	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	98.63	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	BAWU01000006.1	15208	15648
GCA_000684935.1	GCA_000684935.1_03664	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	98.03	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	BAWU01000006.1	16863	17474
GCA_000684935.1	GCA_000684935.1_03665	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	98.64	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	BAWU01000006.1	17564	18451
GCA_000684935.1	GCA_000684935.1_03666	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.01	304	APX31172.1	heat resistance protein YfdX1	NA	NA	BAWU01000006.1	18554	19468
GCA_000684935.1	GCA_000684935.1_03667	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	96.71	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	BAWU01000006.1	19491	19949
GCA_000684935.1	GCA_000684935.1_03671	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	98.95	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	BAWU01000006.1	21119	23968
GCA_000684935.1	GCA_000684935.1_03672	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	98.94	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	BAWU01000006.1	24074	24643
GCA_900459125.1	GCA_900459125.1_01186	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	UHFC01000002.1	1183551	1185470
GCA_022453685.1	GCA_022453685.1_00597	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	149	144	100.00	61.11	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP092643.1	587176	587625
GCA_022453685.1	GCA_022453685.1_03327	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	233	233	99.57	78.11	233	WP_003436401.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CP092643.1	3322901	3323602
GCA_001648835.1	GCA_001648835.1_01927	aac(2)-Ie	aminoglycoside N-acetyltransferase AAC(2)-Ie	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	182	182	100.00	100.00	182	WP_010908954.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	NF000054.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	LVXE01000003.1	209269	209817
GCA_905205105.1	GCA_905205105.1_00481	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAJLCH010000004.1	48465	49928
GCA_905205105.1	GCA_905205105.1_00482	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAJLCH010000004.1	50048	51265
GCA_030232485.1	GCA_030232485.1_01040	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPKA010000022.1	34863	36305
GCA_030232485.1	GCA_030232485.1_01507	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JASPKA010000034.1	4762	5208
GCA_030232485.1	GCA_030232485.1_01509	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPKA010000034.1	6008	6862
GCA_030232485.1	GCA_030232485.1_01510	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JASPKA010000034.1	7125	8666
GCA_030232485.1	GCA_030232485.1_01554	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASPKA010000037.1	2341	4122
GCA_030232485.1	GCA_030232485.1_01757	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASPKA010000041.1	1896	3815
GCA_030232485.1	GCA_030232485.1_01772	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JASPKA010000044.1	849	1268
GCA_030232485.1	GCA_030232485.1_01773	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JASPKA010000044.1	1268	2104
GCA_030232485.1	GCA_030232485.1_01775	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPKA010000044.1	2308	3483
GCA_030232485.1	GCA_030232485.1_02114	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JASPKA010000065.1	88	903
GCA_001809405.1	GCA_001809405.1_01088	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV797568.1	1096	2538
GCA_905196715.1	GCA_905196715.1_01515	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CAJJWA010000059.1	2210	2941
GCA_030177225.1	GCA_030177225.1_01336	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASCSF010000015.1	4388	5233
GCA_030177225.1	GCA_030177225.1_01337	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASCSF010000015.1	5340	7097
GCA_030177225.1	GCA_030177225.1_01338	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASCSF010000015.1	7087	7467
GCA_030177225.1	GCA_030177225.1_01340	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.59	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JASCSF010000015.1	8555	10021
GCA_030177225.1	GCA_030177225.1_01343	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JASCSF010000016.1	2871	3275
GCA_030177225.1	GCA_030177225.1_01344	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JASCSF010000016.1	3492	4235
GCA_030177225.1	GCA_030177225.1_01385	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASCSF010000002.1	29456	30748
GCA_001592325.1	GCA_001592325.1_02160	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	284	98.94	55.87	281	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	BCWS01000005.1	110102	110950
GCA_001588975.1	GCA_001588975.1_01944	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LAWM01000007.1	209395	211314
GCA_000014105.1	GCA_000014105.1_00781	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP000381.1	782411	783790
GCA_000014105.1	GCA_000014105.1_01480	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP000381.1	1522848	1523753
GCA_000014105.1	GCA_000014105.1_01604	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP000381.1	1658680	1659918
GCA_000014105.1	GCA_000014105.1_01605	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP000381.1	1660326	1660958
GCA_000014105.1	GCA_000014105.1_01607	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP000381.1	1661783	1663351
GCA_000014105.1	GCA_000014105.1_01801	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.62	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP000381.1	1866673	1868199
GCA_000224595.1	GCA_000224595.1_00235	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JH114139.1	353307	354272
GCA_000224595.1	GCA_000224595.1_00809	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JH114141.1	245386	246576
GCA_000224595.1	GCA_000224595.1_01953	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JH114146.1	65503	67428
GCA_910575295.1	GCA_910575295.1_00571	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAJTEH010000001.1	607766	609685
GCA_910575295.1	GCA_910575295.1_00997	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAJTEH010000001.1	1025835	1027052
GCA_910575295.1	GCA_910575295.1_00998	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAJTEH010000001.1	1027172	1028635
GCA_910575295.1	GCA_910575295.1_01004	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CAJTEH010000001.1	1032069	1032497
GCA_003626235.1	GCA_003626235.1_01114	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHE01000004.1	66801	67742
GCA_001281465.1	GCA_001281465.1_00756	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.47	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP010516.1	812986	815835
GCA_001281465.1	GCA_001281465.1_01529	mcr-5.1	phosphoethanolamine--lipid A transferase MCR-5.1	core	AMR	AMR	COLISTIN	COLISTIN	ALLELEP	547	547	100.00	100.00	547	WP_053821788.1	phosphoethanolamine--lipid A transferase MCR-5.1	NF033463.1	MCR-5 family phosphoethanolamine--lipid A transferase	CP010516.1	1579844	1581487
GCA_001281465.1	GCA_001281465.1_03065	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	97	91	97.80	65.22	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP010516.1	3273720	3274013
GCA_001281465.1	GCA_001281465.1_03305	aac(3)-IV	AAC(3)-IV family aminoglycoside N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	262	265	96.98	82.10	257	WP_149317372.1	AAC(3)-IV family aminoglycoside N-acetyltransferase	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	CP010516.1	3524709	3525497
GCA_001281465.1	GCA_001281465.1_03865	blaOXA	OXA-837 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	301	100.00	82.62	305	WP_148281568.1	OXA-837 family class D beta-lactamase	NF042983.1	OXA-837 family class D beta-lactamase	CP010517.1	592629	593546
GCA_030176415.1	GCA_030176415.1_02195	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUG010000008.1	43300	44154
GCA_028527685.1	GCA_028527685.1_00011	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.78	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAQPSJ010000001.1	7106	8548
GCA_028527685.1	GCA_028527685.1_01030	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQPSJ010000002.1	249540	250394
GCA_002966695.1	GCA_002966695.1_00137	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP020012.1	128995	129855
GCA_002966695.1	GCA_002966695.1_01436	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP020012.1	1413863	1415257
GCA_017655865.1	GCA_017655865.1_00602	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	123	100.00	45.60	125	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040421.1	579419	579793
GCA_001726065.1	GCA_001726065.1_01284	cfr	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	HMM	351	349	100.00	83.09	349	WP_012116915.1	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	KV766182.1	1305267	1306322
GCA_001726065.1	GCA_001726065.1_01294	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	228	232	98.71	73.04	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	KV766182.1	1319143	1319829
GCA_001726065.1	GCA_001726065.1_01890	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	144	100.00	54.86	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KV766182.1	1909798	1910232
GCA_001726065.1	GCA_001726065.1_02341	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	123	85.37	51.43	105	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KV766182.1	2328158	2328517
GCA_001726065.1	GCA_001726065.1_02390	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	81.10	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KV766182.1	2373187	2374665
GCA_001726065.1	GCA_001726065.1_02438	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	215	100.00	68.37	215	WP_035203840.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	KV766182.1	2423249	2423896
GCA_001726065.1	GCA_001726065.1_04381	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	141	142	97.18	76.81	138	WP_204376221.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	KV766182.1	4299647	4300072
GCA_001726065.1	GCA_001726065.1_04479	msr	Msr family ABC-F type ribosomal protection protein	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	482	485	99.18	72.14	481	WP_101035417.1	Msr family ABC-F type ribosomal protection protein	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV766182.1	4384649	4386097
GCA_016889425.1	GCA_016889425.1_01197	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP069513.1	1322340	1323764
GCA_000468135.1	GCA_000468135.1_02227	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	AWET01000050.1	37259	38224
GCA_000083565.1	GCA_000083565.1_00737	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	AM889136.1	746129	747508
GCA_000083565.1	GCA_000083565.1_01478	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	AM889136.1	1509941	1510846
GCA_000083565.1	GCA_000083565.1_01599	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.06	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	AM889136.1	1644814	1646052
GCA_000083565.1	GCA_000083565.1_01600	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	AM889136.1	1646456	1647088
GCA_000083565.1	GCA_000083565.1_01602	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	AM889136.1	1647912	1649480
GCA_000083565.1	GCA_000083565.1_01791	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.43	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	AM889136.1	1853300	1854826
GCA_018372015.1	GCA_018372015.1_02480	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	45.90	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHAJT010000018.1	8209	8631
GCA_002442915.1	GCA_002442915.1_00059	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	98.86	53.31	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP017463.1	64594	65661
GCA_002442915.1	GCA_002442915.1_00401	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP017463.1	440156	441448
GCA_002442915.1	GCA_002442915.1_00876	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	69.57	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP017463.1	877090	877509
GCA_002442915.1	GCA_002442915.1_01925	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP017463.1	1925558	1926199
GCA_002442915.1	GCA_002442915.1_02528	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP017464.1	12835	13230
GCA_002442915.1	GCA_002442915.1_02529	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP017464.1	13248	14537
GCA_002442915.1	GCA_002442915.1_02530	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	97.12	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP017464.1	14537	14851
GCA_002442915.1	GCA_002442915.1_02639	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP017465.1	10555	11994
GCA_002442915.1	GCA_002442915.1_02643	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	97.71	90.62	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP017465.1	14153	14554
GCA_002442915.1	GCA_002442915.1_02646	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP017465.1	16470	16850
GCA_002442915.1	GCA_002442915.1_02647	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP017465.1	16840	18597
GCA_002442915.1	GCA_002442915.1_02648	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP017465.1	18704	19549
GCA_001062855.1	GCA_001062855.1_00433	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVRG01000007.1	201963	203621
GCA_001062855.1	GCA_001062855.1_01453	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	639	92.96	98.65	594	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JVRG01000025.1	1873	3660
GCA_005888185.1	GCA_005888185.1_00942	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LNKP01000049.1	3843	5237
GCA_003425445.1	GCA_003425445.1_01567	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.41	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031689.1	1561698	1563092
GCA_007989145.1	GCA_007989145.1_00946	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.44	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	BJVM01000005.1	15827	17941
GCA_014306175.1	GCA_014306175.1_01828	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	639	99.69	99.84	637	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JACRWI010000009.1	64373	66295
GCA_026222715.1	GCA_026222715.1_00286	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	305	97.38	54.46	303	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP034924.1	328366	329286
GCA_021341835.1	GCA_021341835.1_00638	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAJTNQ010000001.1	665222	665959
GCA_030228345.1	GCA_030228345.1_02004	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASPBB010000005.1	126358	127650
GCA_000818055.1	GCA_000818055.1_00966	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP009045.1	1100804	1102723
GCA_024759565.1	GCA_024759565.1_00857	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103197.1	1068694	1069659
GCA_024759565.1	GCA_024759565.1_00926	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103197.1	1151208	1153133
GCA_024759565.1	GCA_024759565.1_02222	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103197.1	2685963	2686928
GCA_024759565.1	GCA_024759565.1_02454	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	99.59	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	CP103197.1	2943563	2944297
GCA_024759565.1	GCA_024759565.1_03613	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.36	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103197.1	4167122	4168081
GCA_024759565.1	GCA_024759565.1_04660	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	43.69	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP103197.1	5294565	5294891
GCA_001275345.1	GCA_001275345.1_00605	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP012507.1	676010	677434
GCA_022354605.1	GCA_022354605.1_01417	catA	type A-4 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	217	217	100.00	97.24	217	WP_063843208.1	type A-4 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP055095.1	1481396	1482049
GCA_022354605.1	GCA_022354605.1_03063	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	92.19	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP055095.1	3272436	3273014
GCA_022354605.1	GCA_022354605.1_03067	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	194	194	100.00	99.48	194	AAD47284.1	tellurium resistance-associated protein TerZ	NA	NA	CP055095.1	3275759	3276343
GCA_022354605.1	GCA_022354605.1_03078	tet(J)	tetracycline efflux MFS transporter Tet(J)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	398	398	100.00	99.75	398	WP_004245621.1	tetracycline efflux MFS transporter Tet(J)	NF012194.0	tetracycline efflux MFS transporter Tet(J)	CP055095.1	3285589	3286785
GCA_022354605.1	GCA_022354605.1_03556	tet(A)	tetracycline efflux MFS transporter Tet(A)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	424	399	100.00	99.75	399	WP_000804064.1	tetracycline efflux MFS transporter Tet(A)	NF012193.0	tetracycline efflux MFS transporter Tet(A)	CP055095.1	3811150	3812424
GCA_022354605.1	GCA_022354605.1_03558	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	189	144	100.00	93.75	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP055095.1	3814382	3814951
GCA_022354605.1	GCA_022354605.1_03559	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	90.11	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP055095.1	3815252	3815527
GCA_022354605.1	GCA_022354605.1_03561	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	537	561	95.19	85.32	538	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP055095.1	3816118	3817731
GCA_022354605.1	GCA_022354605.1_03562	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	120	121	100.00	82.64	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP055095.1	3817749	3818111
GCA_022354605.1	GCA_022354605.1_03566	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP055095.1	3821332	3822147
GCA_022354605.1	GCA_022354605.1_03568	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP055095.1	3823063	3823899
GCA_022354605.1	GCA_022354605.1_03569	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP055095.1	3823899	3824702
GCA_022354605.1	GCA_022354605.1_03570	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043265.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP055095.1	3824763	3825578
GCA_022354605.1	GCA_022354605.1_03574	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP055095.1	3828795	3829655
GCA_022354605.1	GCA_022354605.1_03580	aac(3)-IId	aminoglycoside N-acetyltransferase AAC(3)-IId	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	EXACTP	286	286	100.00	100.00	286	WP_000557454.1	aminoglycoside N-acetyltransferase AAC(3)-IId	NF033080.0	AAC(3)-II family aminoglycoside N-acetyltransferase	CP055095.1	3834094	3834954
GCA_022354605.1	GCA_022354605.1_03584	mph(A)	Mph(A) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	301	301	100.00	100.00	301	WP_000219391.1	Mph(A) family macrolide 2-phosphotransferase	NF000254.1	Mph(A) family macrolide 2-phosphotransferase	CP055095.1	3838474	3839379
GCA_022354605.1	GCA_022354605.1_03591	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP055095.1	3846017	3846856
GCA_022354605.1	GCA_022354605.1_03592	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP055095.1	3846850	3847197
GCA_022354605.1	GCA_022354605.1_03593	aadA5	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA5	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_000503573.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA5	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP055095.1	3847403	3848191
GCA_022354605.1	GCA_022354605.1_03594	dfrA17	trimethoprim-resistant dihydrofolate reductase DfrA17	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	199	157	100.00	99.36	157	WP_001389366.1	trimethoprim-resistant dihydrofolate reductase DfrA17	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	CP055095.1	3848322	3848921
GCA_022354605.1	GCA_022354605.1_03602	catA1	type A-1 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	219	219	100.00	100.00	219	WP_000412211.1	type A-1 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP055095.1	3856146	3856805
GCA_019665745.1	GCA_019665745.1_00372	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	88.81	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP081105.1	373431	374324
GCA_019665745.1	GCA_019665745.1_00668	ampC-Ecan	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	381	381	100.00	99.21	381	WP_006178946.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	NF041666.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	CP081105.1	673141	674286
GCA_019665745.1	GCA_019665745.1_00817	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	95.04	141	WP_025205684.1	fosfomycin resistance glutathione transferase FosA2	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	CP081105.1	830092	830517
GCA_019665745.1	GCA_019665745.1_01647	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	94.07	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	CP081105.1	1698797	1700971
GCA_019665745.1	GCA_019665745.1_01650	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	90.95	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP081105.1	1703387	1707046
GCA_019665745.1	GCA_019665745.1_01651	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.45	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP081105.1	1707188	1708303
GCA_019665745.1	GCA_019665745.1_01689	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	100.00	78.01	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP081105.1	1753142	1753573
GCA_019665745.1	GCA_019665745.1_02242	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	122	102	100.00	66.94	124	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP081105.1	2290998	2291366
GCA_019665745.1	GCA_019665745.1_03529	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	141	141	100.00	85.82	141	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP081105.1	3669563	3669988
GCA_002861145.1	GCA_002861145.1_00492	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	PKHB01000001.1	571140	572618
GCA_002861145.1	GCA_002861145.1_00660	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	PKHB01000001.1	796386	797603
GCA_002861145.1	GCA_002861145.1_00661	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	PKHB01000001.1	797723	799186
GCA_025642215.1	GCA_025642215.1_00242	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP106751.1	239471	239899
GCA_030232845.1	GCA_030232845.1_00221	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPHF010000014.1	788	1639
GCA_030232845.1	GCA_030232845.1_00230	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPHF010000014.1	9521	10375
GCA_030232845.1	GCA_030232845.1_00231	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPHF010000015.1	269	1444
GCA_001054395.1	GCA_001054395.1_01078	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JVSI01000050.1	35671	36525
GCA_008633025.1	GCA_008633025.1_01426	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.28	639	WP_011860841.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	BHYO01000007.1	12073	13992
GCA_000348705.1	GCA_000348705.1_00681	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CM001835.1	638068	639267
GCA_001811565.1	GCA_001811565.1_00383	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	KV805183.1	120	935
GCA_001811565.1	GCA_001811565.1_01030	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV805197.1	17557	18411
GCA_001811565.1	GCA_001811565.1_01164	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	KV805200.1	2673	3509
GCA_001811565.1	GCA_001811565.1_01165	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	KV805200.1	3509	3928
GCA_001811565.1	GCA_001811565.1_02348	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV805227.1	1771	3213
GCA_018375595.1	GCA_018375595.1_01093	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.85	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHACY010000078.1	553	963
GCA_000251945.2	GCA_000251945.2_01338	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AILE01000001.1	898024	899814
GCA_000251945.2	GCA_000251945.2_01398	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AILE01000001.1	952065	953282
GCA_000251945.2	GCA_000251945.2_01399	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AILE01000001.1	953402	954865
GCA_008726875.1	GCA_008726875.1_00475	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VYWM01000001.1	50488	52407
GCA_008726875.1	GCA_008726875.1_00476	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	457	458	98.47	98.67	451	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	VYWM01000001.1	52505	53878
GCA_008726875.1	GCA_008726875.1_00743	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VYWM01000001.1	305766	307406
GCA_008726875.1	GCA_008726875.1_00816	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	VYWM01000022.1	4923	5654
GCA_000235485.1	GCA_000235485.1_01254	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JH378888.1	366747	367175
GCA_947254525.1	GCA_947254525.1_00140	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CAMYEP010000001.1	155492	157411
GCA_018310275.1	GCA_018310275.1_00701	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAGXBX010000001.1	506725	507942
GCA_018310275.1	GCA_018310275.1_00702	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAGXBX010000001.1	508062	509525
GCA_024668745.2	GCA_024668745.2_00649	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP102573.2	622824	623669
GCA_024668745.2	GCA_024668745.2_00650	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP102573.2	623776	625533
GCA_024668745.2	GCA_024668745.2_00651	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP102573.2	625523	625903
GCA_024668745.2	GCA_024668745.2_00659	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	244	244	100.00	99.18	244	WP_014158490.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP102573.2	629768	630502
GCA_024668745.2	GCA_024668745.2_00660	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP102573.2	630808	632184
GCA_024668745.2	GCA_024668745.2_00661	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP102573.2	632544	633287
GCA_024668745.2	GCA_024668745.2_00662	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP102573.2	633510	633908
GCA_024668745.2	GCA_024668745.2_01025	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP102573.2	979496	981502
GCA_024668745.2	GCA_024668745.2_01072	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP102573.2	1023391	1023792
GCA_024668745.2	GCA_024668745.2_01073	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102573.2	1023810	1025099
GCA_024668745.2	GCA_024668745.2_01096	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP102573.2	1043611	1044003
GCA_024668745.2	GCA_024668745.2_01097	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102573.2	1044021	1045313
GCA_024668745.2	GCA_024668745.2_01175	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102573.2	1115238	1116530
GCA_003491325.1	GCA_003491325.1_00439	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP022881.1	473464	474756
GCA_015680025.1	GCA_015680025.1_00380	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP049232.1	378506	380425
GCA_030229515.1	GCA_030229515.1_00006	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPGZ010000011.1	2652	3827
GCA_030229515.1	GCA_030229515.1_02209	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	283	283	100.00	99.65	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPGZ010000009.1	787	1638
GCA_030229515.1	GCA_030229515.1_02218	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPGZ010000009.1	9520	10374
GCA_019375855.1	GCA_019375855.1_01206	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	392	321	93.15	100.00	299	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCS010000024.1	42004	43182
GCA_019375855.1	GCA_019375855.1_03091	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCS010000008.1	94706	95896
GCA_019375855.1	GCA_019375855.1_03212	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCS010000009.1	83157	85082
GCA_900458845.1	GCA_900458845.1_00018	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	95.12	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	UHEC01000002.1	22146	22763
GCA_900458845.1	GCA_900458845.1_00132	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	UHEC01000001.1	106684	106998
GCA_900458845.1	GCA_900458845.1_00133	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.37	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHEC01000001.1	106998	108287
GCA_900458845.1	GCA_900458845.1_00134	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	UHEC01000001.1	108305	108706
GCA_900458845.1	GCA_900458845.1_00144	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	94.53	128	AAA27589.1	thioredoxin-dependent arsenate reductase	NA	NA	UHEC01000001.1	118769	119161
GCA_900458845.1	GCA_900458845.1_00145	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHEC01000001.1	119179	120468
GCA_900458845.1	GCA_900458845.1_00256	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	96.72	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	UHEC01000001.1	232608	232976
GCA_900458845.1	GCA_900458845.1_00259	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	91.14	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHEC01000001.1	234319	235608
GCA_900458845.1	GCA_900458845.1_00263	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UHEC01000001.1	239294	239641
GCA_900458845.1	GCA_900458845.1_00299	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	142	143	88.81	58.02	131	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	UHEC01000001.1	270284	270712
GCA_900458845.1	GCA_900458845.1_01327	sal	Sal family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	HMM	543	543	100.00	69.43	543	WP_096809342.1	Sal family ABC-F type ribosomal protection protein	NF000169.2	Sal family ABC-F type ribosomal protection protein	UHEC01000001.1	1270307	1271938
GCA_900458845.1	GCA_900458845.1_01979	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	PARTIALP	273	429	63.64	93.77	273	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	UHEC01000001.1	1945616	1946437
GCA_900458845.1	GCA_900458845.1_02069	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	85.05	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	UHEC01000001.1	2021184	2021507
GCA_900458845.1	GCA_900458845.1_02080	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	100.00	76.26	139	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	UHEC01000001.1	2028894	2029313
GCA_900458845.1	GCA_900458845.1_02354	fusF	fusidic acid resistance EF-G-binding protein FusF	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	PARTIALP	131	214	60.28	97.67	129	WP_063851267.1	fusidic acid resistance EF-G-binding protein FusF	NA	NA	UHEC01000001.1	2288023	2288418
GCA_900458845.1	GCA_900458845.1_02364	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	282	281	99.29	53.05	279	WP_000733274.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	UHEC01000001.1	2294877	2295725
GCA_900458845.1	GCA_900458845.1_02662	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	56.61	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	UHEC01000001.1	2578893	2579945
GCA_009378835.1	GCA_009378835.1_00112	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCU01000010.1	101611	102552
GCA_003943215.1	GCA_003943215.1_00626	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJOX01000001.1	612346	613809
GCA_003943215.1	GCA_003943215.1_00627	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJOX01000001.1	613929	615146
GCA_002886865.1	GCA_002886865.1_00282	aac(2)-Ic	aminoglycoside N-acetyltransferase AAC(2)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	181	181	100.00	100.00	181	WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	NF000034.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	CP025607.1	314301	314846
GCA_002886865.1	GCA_002886865.1_02101	erm(37)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	150	179	83.80	99.33	150	WP_003900446.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	NA	NA	CP025607.1	2231764	2232216
GCA_002886865.1	GCA_002886865.1_02186	blaC	class A beta-lactamase BlaC	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	307	307	100.00	100.00	307	WP_003410677.1	class A beta-lactamase BlaC	NF041154.1	class A beta-lactamase BlaC	CP025607.1	2325882	2326805
GCA_002879575.1	GCA_002879575.1_00100	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	PNRH01000001.1	108590	110509
GCA_003355335.1	GCA_003355335.1_00319	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP031326.1	340343	341722
GCA_003355335.1	GCA_003355335.1_01383	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	508	99.61	97.83	506	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP031326.1	1417699	1419222
GCA_003355335.1	GCA_003355335.1_01585	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP031326.1	1631551	1633119
GCA_003355335.1	GCA_003355335.1_01587	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.14	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP031326.1	1633944	1634576
GCA_003355335.1	GCA_003355335.1_01588	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.79	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP031326.1	1634980	1636218
GCA_003355335.1	GCA_003355335.1_01715	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP031326.1	1772016	1772921
GCA_019733875.1	GCA_019733875.1_01217	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAASIE010000003.1	144458	145195
GCA_030176055.1	GCA_030176055.1_00348	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVJ010000015.1	52322	53176
GCA_019456855.1	GCA_019456855.1_01422	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JACVSY010000004.1	366	1499
GCA_000649125.1	GCA_000649125.1_00609	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	340	350	95.43	53.73	335	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JIBR01000012.1	158097	159119
GCA_000649125.1	GCA_000649125.1_00743	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JIBR01000012.1	301808	303100
GCA_000649125.1	GCA_000649125.1_01164	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JIBR01000024.1	33593	34012
GCA_000649125.1	GCA_000649125.1_02172	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JIBR01000050.1	241	975
GCA_003033945.1	GCA_003033945.1_01470	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	312	304	92.11	66.90	287	WP_087344360.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	CP028366.1	1608214	1609152
GCA_003033945.1	GCA_003033945.1_02952	tetB(58)	tetracycline efflux ABC transporter Tet(58) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	271	271	100.00	91.88	271	WP_071223302.1	tetracycline efflux ABC transporter Tet(58) subunit B	NA	NA	CP028366.1	3159347	3160162
GCA_003033945.1	GCA_003033945.1_03132	taeA	ABC-F type ribosomal protection protein TaeA	core	AMR	AMR	PLEUROMUTILIN	TIAMULIN	BLASTP	651	648	100.00	91.86	651	WP_071223118.1	ABC-F type ribosomal protection protein TaeA	NA	NA	CP028366.1	3368284	3370239
GCA_003033945.1	GCA_003033945.1_04063	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	498	494	99.60	61.99	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP028366.1	4380013	4381509
GCA_003033945.1	GCA_003033945.1_04165	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	92.91	48.81	252	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP028366.1	4488153	4488962
GCA_003033945.1	GCA_003033945.1_04241	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	211	212	99.53	77.25	211	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP028366.1	4561087	4561722
GCA_003033945.1	GCA_003033945.1_04509	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	68.06	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP028366.1	4880366	4881016
GCA_003033945.1	GCA_003033945.1_04681	aac(2)-IIb	kasugamycin N-acetyltransferase AAC(2)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	HMM	239	240	99.58	66.95	239	WP_071224044.1	kasugamycin N-acetyltransferase AAC(2)-IIb	NF033472.1	kasugamycin N-acetyltransferase AAC(2)-IIb	CP028366.1	5070939	5071658
GCA_003033945.1	GCA_003033945.1_06077	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	97.56	44.64	280	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP028366.1	6538248	6539111
GCA_007786375.1	GCA_007786375.1_00664	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VMTY01000019.1	42262	43686
GCA_007786375.1	GCA_007786375.1_01438	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VMTY01000035.1	22344	23198
GCA_000177075.1	GCA_000177075.1_00898	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	ADEG01000078.1	12761	14686
GCA_000177075.1	GCA_000177075.1_01870	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	ADEG01000039.1	97442	99367
GCA_000177075.1	GCA_000177075.1_02056	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	ADEG01000034.1	8237	9202
GCA_000177075.1	GCA_000177075.1_02217	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	ADEG01000026.1	949	1749
GCA_000692055.1	GCA_000692055.1_01890	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JMGB01000002.1	571015	572088
GCA_000692055.1	GCA_000692055.1_01932	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JMGB01000002.1	625488	625910
GCA_000692055.1	GCA_000692055.1_01996	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JMGB01000002.1	694867	695214
GCA_000692055.1	GCA_000692055.1_02000	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JMGB01000002.1	698897	700189
GCA_000692055.1	GCA_000692055.1_02455	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	294	281	100.00	94.22	294	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JMGB01000005.1	20045	20929
GCA_000692055.1	GCA_000692055.1_02457	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JMGB01000005.1	22879	23259
GCA_022815405.1	GCA_022815405.1_01286	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JALGYN010000011.1	10340	11326
GCA_022815405.1	GCA_022815405.1_01287	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JALGYN010000011.1	11426	13432
GCA_022815405.1	GCA_022815405.1_01336	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALGYN010000015.1	11	856
GCA_022815405.1	GCA_022815405.1_01337	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALGYN010000015.1	963	2720
GCA_022815405.1	GCA_022815405.1_01338	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALGYN010000015.1	2710	3090
GCA_022815405.1	GCA_022815405.1_01341	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALGYN010000015.1	4876	5436
GCA_022815405.1	GCA_022815405.1_01342	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALGYN010000015.1	5620	7164
GCA_022815405.1	GCA_022815405.1_01675	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALGYN010000002.1	287532	288824
GCA_022815405.1	GCA_022815405.1_01701	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JALGYN010000020.1	2210	2614
GCA_022815405.1	GCA_022815405.1_01702	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JALGYN010000020.1	2831	3574
GCA_022815405.1	GCA_022815405.1_01704	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JALGYN010000021.1	268	3342
GCA_022815405.1	GCA_022815405.1_01712	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	244	244	100.00	99.59	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JALGYN010000024.1	283	1017
GCA_022815405.1	GCA_022815405.1_02447	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JALGYN010000008.1	12657	13154
GCA_000020225.1	GCA_000020225.1_00193	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	303	88.45	40.30	268	WP_041881964.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP001071.1	230995	231879
GCA_003942405.1	GCA_003942405.1_00271	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJMY01000001.1	302381	303598
GCA_003942405.1	GCA_003942405.1_00272	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJMY01000001.1	303718	305181
GCA_003942405.1	GCA_003942405.1_00277	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJMY01000001.1	307132	307560
GCA_902373685.1	GCA_902373685.1_01039	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_033493020.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CABKNH010000002.1	84403	86322
GCA_012273435.1	GCA_012273435.1_00016	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	200	281	69.40	95.90	195	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	NA	CP050982.1	13302	13904
GCA_012273435.1	GCA_012273435.1_00017	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP050982.1	14011	15768
GCA_012273435.1	GCA_012273435.1_00018	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP050982.1	15758	16138
GCA_012273435.1	GCA_012273435.1_00077	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP050982.1	65587	66432
GCA_012273435.1	GCA_012273435.1_00078	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP050982.1	66539	68296
GCA_012273435.1	GCA_012273435.1_00079	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP050982.1	68286	68666
GCA_012273435.1	GCA_012273435.1_02177	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP050982.1	2122131	2123423
GCA_012273435.1	GCA_012273435.1_02181	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP050982.1	2127106	2127453
GCA_012273435.1	GCA_012273435.1_02407	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP050981.1	9490	10050
GCA_012273435.1	GCA_012273435.1_02408	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP050981.1	10234	11778
GCA_000009585.1	GCA_000009585.1_00046	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	AM990992.1	47524	49530
GCA_000009585.1	GCA_000009585.1_00159	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	AM990992.1	155714	157072
GCA_000009585.1	GCA_000009585.1_00423	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.67	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	AM990992.1	430664	432019
GCA_000009585.1	GCA_000009585.1_00997	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AM990992.1	1001761	1003680
GCA_000009585.1	GCA_000009585.1_01725	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	279	250	100.00	96.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	AM990992.1	1746116	1746955
GCA_000009585.1	GCA_000009585.1_01892	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AM990992.1	1936522	1937814
GCA_000009585.1	GCA_000009585.1_02096	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AM990992.1	2096944	2097324
GCA_000009585.1	GCA_000009585.1_02097	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AM990992.1	2097314	2099071
GCA_000009585.1	GCA_000009585.1_02098	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AM990992.1	2099178	2100023
GCA_000009585.1	GCA_000009585.1_02152	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	AM990992.1	2147884	2148018
GCA_000009585.1	GCA_000009585.1_02317	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	AM990992.1	2311260	2312702
GCA_000009585.1	GCA_000009585.1_02576	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	AM990992.1	2550432	2551397
GCA_000009585.1	GCA_000009585.1_02577	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	AM990992.1	2551965	2552912
GCA_000009585.1	GCA_000009585.1_02578	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	AM990992.1	2552914	2553891
GCA_000009585.1	GCA_000009585.1_02794	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	AM990992.1	2782831	2784360
GCA_000009585.1	GCA_000009585.1_02830	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	98.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AM990992.1	2831150	2832202
GCA_000009585.1	GCA_000009585.1_02850	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.46	1183	BAB96477.1	collagen adhesin Cna	NA	NA	AM990992.1	2850184	2853735
GCA_000009585.1	GCA_000009585.1_02876	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	AM990993.1	3727	5106
GCA_000009585.1	GCA_000009585.1_02877	str	streptomycin adenylyltransferase Str	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	282	282	100.00	100.00	282	WP_001258486.1	streptomycin adenylyltransferase Str	NF000062.1	streptomycin adenylyltransferase Str	AM990994.1	185	1033
GCA_001836315.1	GCA_001836315.1_01533	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV828082.1	32659	34578
GCA_002014875.1	GCA_002014875.1_00771	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	MUXS01000003.1	2171	3829
GCA_002014875.1	GCA_002014875.1_01625	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.24	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	MUXS01000008.1	242658	243857
GCA_026659915.1	GCA_026659915.1_00216	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	522	522	100.00	97.70	522	WP_002440627.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	JANSKQ010000016.1	1489	3057
GCA_026659915.1	GCA_026659915.1_00235	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANSKQ010000017.1	4518	4865
GCA_026659915.1	GCA_026659915.1_00239	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JANSKQ010000017.1	8551	9840
GCA_026659915.1	GCA_026659915.1_00246	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JANSKQ010000017.1	14868	15248
GCA_026659915.1	GCA_026659915.1_00247	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JANSKQ010000017.1	15238	16995
GCA_026659915.1	GCA_026659915.1_00248	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JANSKQ010000017.1	17102	17947
GCA_026659915.1	GCA_026659915.1_01213	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JANSKQ010000002.1	123799	124440
GCA_026659915.1	GCA_026659915.1_01866	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	52.01	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JANSKQ010000004.1	195592	196644
GCA_003625605.1	GCA_003625605.1_01363	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZGU01000005.1	102961	103902
GCA_000455445.1	GCA_000455445.1_00579	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	HG417091.1	162068	163033
GCA_000455445.1	GCA_000455445.1_02628	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	HG417104.1	20976	22901
GCA_020736045.1	GCA_020736045.1_01352	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP085952.1	1323331	1324725
GCA_000284535.1	GCA_000284535.1_00035	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	HE681097.1	39734	41740
GCA_000284535.1	GCA_000284535.1_00036	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	HE681097.1	41840	42826
GCA_000284535.1	GCA_000284535.1_00111	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	HE681097.1	126903	128261
GCA_000284535.1	GCA_000284535.1_00301	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	HE681097.1	354309	355664
GCA_000284535.1	GCA_000284535.1_01614	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	285	250	100.00	94.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	HE681097.1	1671393	1672250
GCA_000284535.1	GCA_000284535.1_01783	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.42	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	HE681097.1	1862236	1863528
GCA_000284535.1	GCA_000284535.1_01839	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	HE681097.1	1905701	1906456
GCA_000284535.1	GCA_000284535.1_01840	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	256	261	100.00	93.87	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	HE681097.1	1906495	1907265
GCA_000284535.1	GCA_000284535.1_01841	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	HE681097.1	1907419	1908147
GCA_000284535.1	GCA_000284535.1_01842	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	93.72	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	HE681097.1	1908182	1908901
GCA_000284535.1	GCA_000284535.1_01843	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	HE681097.1	1909182	1909946
GCA_000284535.1	GCA_000284535.1_01985	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	HE681097.1	2021844	2022224
GCA_000284535.1	GCA_000284535.1_01986	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	HE681097.1	2022214	2023971
GCA_000284535.1	GCA_000284535.1_01987	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	HE681097.1	2024078	2024923
GCA_000284535.1	GCA_000284535.1_02007	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	HE681097.1	2044137	2044487
GCA_000284535.1	GCA_000284535.1_02012	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.16	163	CAA24957.1	staphylokinase	NA	NA	HE681097.1	2046701	2047192
GCA_000284535.1	GCA_000284535.1_02094	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	HE681097.1	2106736	2106870
GCA_000284535.1	GCA_000284535.1_02242	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	98.33	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	HE681097.1	2258900	2260342
GCA_000284535.1	GCA_000284535.1_02497	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	HE681097.1	2500034	2500999
GCA_000284535.1	GCA_000284535.1_02498	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	HE681097.1	2501567	2502514
GCA_000284535.1	GCA_000284535.1_02499	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	HE681097.1	2502516	2503493
GCA_000284535.1	GCA_000284535.1_02736	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	94.11	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	HE681097.1	2746914	2748443
GCA_000284535.1	GCA_000284535.1_02773	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	HE681097.1	2791865	2792917
GCA_028994155.1	GCA_028994155.1_01288	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	228	232	98.71	72.61	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CP118714.1	1343169	1343855
GCA_028994155.1	GCA_028994155.1_01854	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	144	100.00	54.86	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP118714.1	1906349	1906783
GCA_028994155.1	GCA_028994155.1_02415	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	81.50	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP118714.1	2423267	2424745
GCA_028994155.1	GCA_028994155.1_02477	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	215	100.00	68.37	215	WP_035203840.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP118714.1	2487314	2487961
GCA_028994155.1	GCA_028994155.1_04333	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	141	140	100.00	76.43	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP118714.1	4281060	4281485
GCA_028994155.1	GCA_028994155.1_04425	msr	Msr family ABC-F type ribosomal protection protein	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	482	485	99.18	71.52	481	WP_101035417.1	Msr family ABC-F type ribosomal protection protein	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP118714.1	4358221	4359669
GCA_902482765.1	GCA_902482765.1_00065	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	100.00	45.53	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABTAM010000001.1	57621	57986
GCA_000142965.1	GCA_000142965.1_02875	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	GL349577.1	17643	19568
GCA_000142965.1	GCA_000142965.1_02890	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	GL349578.1	12515	13480
GCA_000142965.1	GCA_000142965.1_02920	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	GL349581.1	2109	2909
GCA_003626415.1	GCA_003626415.1_01284	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHO01000004.1	101713	102654
GCA_023148225.1	GCA_023148225.1_00649	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHXOC010000002.1	132283	134202
GCA_015243435.1	GCA_015243435.1_00080	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP042341.1	93067	93489
GCA_015243435.1	GCA_015243435.1_00121	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP042341.1	146892	147965
GCA_015243435.1	GCA_015243435.1_00443	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP042341.1	515021	516565
GCA_015243435.1	GCA_015243435.1_00444	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP042341.1	516749	517309
GCA_015243435.1	GCA_015243435.1_00446	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP042341.1	518613	519512
GCA_015243435.1	GCA_015243435.1_00447	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP042341.1	519611	521077
GCA_015243435.1	GCA_015243435.1_00893	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP042341.1	935109	936398
GCA_015243435.1	GCA_015243435.1_02462	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP042343.1	13904	14521
GCA_000474075.1	GCA_000474075.1_01712	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	BASU01000001.1	13243	14283
GCA_030826125.1	GCA_030826125.1_00668	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAPJOP010000001.1	232484	233449
GCA_019391875.1	GCA_019391875.1_02693	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXRD010000009.1	3715	5640
GCA_008330805.1	GCA_008330805.1_00456	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP021520.1	457531	458910
GCA_008330805.1	GCA_008330805.1_01167	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP021520.1	1204613	1205518
GCA_008330805.1	GCA_008330805.1_01286	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.82	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP021520.1	1336900	1338138
GCA_008330805.1	GCA_008330805.1_01287	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP021520.1	1338542	1339174
GCA_008330805.1	GCA_008330805.1_01289	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP021520.1	1339999	1341567
GCA_008330805.1	GCA_008330805.1_01475	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP021520.1	1545085	1546611
GCA_900542205.1	GCA_900542205.1_00123	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.02	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	UQMS01000003.1	4608	6086
GCA_900542205.1	GCA_900542205.1_01348	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	UQMS01000076.1	602	1981
GCA_903172975.1	GCA_903172975.1_00685	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	LR797999.1	683953	685170
GCA_903172975.1	GCA_903172975.1_00686	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	LR797999.1	685290	686753
GCA_002902365.1	GCA_002902365.1_00363	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	91.84	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPQC01000019.1	19012	20304
GCA_002902365.1	GCA_002902365.1_00367	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	PPQC01000019.1	23987	24334
GCA_002902365.1	GCA_002902365.1_00522	fusF	fusidic acid resistance EF-G-binding protein FusF	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	PARTIALP	131	214	60.28	98.45	129	WP_063851267.1	fusidic acid resistance EF-G-binding protein FusF	NA	NA	PPQC01000024.1	56946	57341
GCA_002902365.1	GCA_002902365.1_00531	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	233	281	81.49	56.77	229	WP_000733274.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	PPQC01000024.1	63806	64507
GCA_002902365.1	GCA_002902365.1_00719	sal	Sal family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	HMM	543	543	100.00	69.43	543	WP_096809342.1	Sal family ABC-F type ribosomal protection protein	NF000169.2	Sal family ABC-F type ribosomal protection protein	PPQC01000025.1	125195	126826
GCA_002902365.1	GCA_002902365.1_00854	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	98.27	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	PPQC01000029.1	15527	16960
GCA_002902365.1	GCA_002902365.1_01071	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.54	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPQC01000036.1	43310	44599
GCA_002902365.1	GCA_002902365.1_01218	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	85.05	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	PPQC01000036.1	159319	159642
GCA_002902365.1	GCA_002902365.1_01755	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	142	150	89.33	55.22	134	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	PPQC01000046.1	306063	306491
GCA_002902365.1	GCA_002902365.1_01854	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	PPQC01000007.1	7765	9231
GCA_002902365.1	GCA_002902365.1_01870	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	100.00	76.26	139	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	PPQC01000051.1	11613	12032
GCA_019375675.1	GCA_019375675.1_01408	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCL010000035.1	3874	5070
GCA_019375675.1	GCA_019375675.1_02109	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCL010000056.1	7580	8380
GCA_019375675.1	GCA_019375675.1_02258	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCL010000062.1	2923	4848
GCA_019375675.1	GCA_019375675.1_02544	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCL010000084.1	864	1829
GCA_001813725.1	GCA_001813725.1_01510	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.12	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV813811.1	213519	215177
GCA_001813725.1	GCA_001813725.1_01675	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	640	92.97	100.00	595	WP_063856422.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV813814.1	1110	2897
GCA_001813725.1	GCA_001813725.1_01684	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV813814.1	12452	13306
GCA_024104925.1	GCA_024104925.1_00272	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTW010000019.1	2075	2485
GCA_024104925.1	GCA_024104925.1_02167	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAHDTW010000007.1	125328	126182
GCA_000478035.1	GCA_000478035.1_02405	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	256	284	90.14	99.61	256	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515734.1	42	812
GCA_001237185.1	GCA_001237185.1_01014	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUGS01000006.1	97930	99222
GCA_001237185.1	GCA_001237185.1_01589	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CUGS01000011.1	78914	79759
GCA_001237185.1	GCA_001237185.1_01590	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CUGS01000011.1	79868	81625
GCA_001237185.1	GCA_001237185.1_01591	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CUGS01000011.1	81615	81995
GCA_001237185.1	GCA_001237185.1_02289	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUGS01000023.1	25790	27082
GCA_001237185.1	GCA_001237185.1_02290	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CUGS01000023.1	27100	27492
GCA_001237185.1	GCA_001237185.1_02411	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CUGS01000030.1	578	2044
GCA_001237185.1	GCA_001237185.1_02412	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CUGS01000030.1	2143	3042
GCA_001237185.1	GCA_001237185.1_02438	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CUGS01000031.1	9856	11400
GCA_001237185.1	GCA_001237185.1_02439	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CUGS01000031.1	11584	12144
GCA_000173655.1	GCA_000173655.1_00008	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	ABZU01000039.1	420	2339
GCA_000173655.1	GCA_000173655.1_01076	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	ABZU01000006.1	35811	37232
GCA_000184185.1	GCA_000184185.1_00390	fdeC	inverse autotransporter adhesin FdeC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1417	1416	99.93	91.38	1415	ABE05822.1	inverse autotransporter adhesin FdeC	NA	NA	CP002185.1	382381	386634
GCA_000184185.1	GCA_000184185.1_01297	ariR	biofilm/acid-resistance regulator AriR	plus	STRESS	ACID	NA	NA	EXACTP	88	88	100.00	100.00	88	AAC74250.1	biofilm/acid-resistance regulator AriR	NA	NA	CP002185.1	1309220	1309486
GCA_000184185.1	GCA_000184185.1_01819	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	BLASTP	102	102	100.00	98.04	102	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP002185.1	1817658	1817966
GCA_000184185.1	GCA_000184185.1_02174	emrE	multidrug efflux SMR transporter EmrE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	110	110	100.00	98.18	110	CAA77936.1	multidrug efflux SMR transporter EmrE	NF042984.1	multidrug efflux SMR transporter EmrE	CP002185.1	2163512	2163844
GCA_000184185.1	GCA_000184185.1_03331	sslE	lipoprotein metalloprotease SslE	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	1520	1520	100.00	87.98	1522	ADE89421.1	lipoprotein metalloprotease SslE	NF037973.1	lipoprotein metalloprotease SslE	CP002185.1	3323653	3328215
GCA_000184185.1	GCA_000184185.1_03633	acrF	multidrug efflux RND transporter permease subunit AcrF	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1034	1034	100.00	99.52	1034	AAC76298.1	multidrug efflux RND transporter permease subunit AcrF	NA	NA	CP002185.1	3627992	3631096
GCA_000184185.1	GCA_000184185.1_03863	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	BAE77793.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP002185.1	3844008	3844361
GCA_000184185.1	GCA_000184185.1_03865	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	146	141	99.29	92.86	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP002185.1	3845717	3846157
GCA_000184185.1	GCA_000184185.1_03928	lpfA	long polar fimbria major subunit LpfA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	174	174	100.00	100.00	174	CAV00478.1	long polar fimbria major subunit LpfA	NA	NA	CP002185.1	3912449	3912973
GCA_000184185.1	GCA_000184185.1_04087	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.75	394	BAE77620.1	multidrug efflux MFS transporter EmrD	NA	NA	CP002185.1	4076217	4077401
GCA_000184185.1	GCA_000184185.1_04146	lpfA-O113	long polar fimbria major subunit LpfA-O113	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	190	190	100.00	100.00	190	AAT76975.1	long polar fimbria major subunit LpfA-O113	NA	NA	CP002185.1	4138397	4138969
GCA_000184185.1	GCA_000184185.1_04393	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	CP002185.1	4364644	4365546
GCA_000184185.1	GCA_000184185.1_04654	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	377	377	100.00	97.88	377	WP_063610930.1	extended-spectrum class C beta-lactamase EC-15	NF000185.2	BlaEC family class C beta-lactamase	CP002185.1	4635596	4636729
GCA_000184185.1	GCA_000184185.1_04843	mdtM	multidrug efflux MFS transporter MdtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	100.00	98.29	410	AAC77293.1	multidrug efflux MFS transporter MdtM	NA	NA	CP002185.1	4829728	4830960
GCA_000184185.1	GCA_000184185.1_04996	faeG	F4 (K88) fimbria major subunit/adhesin FaeG	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	285	285	100.00	100.00	285	AFH14350.1	F4 (K88) fimbria major subunit/adhesin FaeG	NA	NA	CP002186.1	78299	79156
GCA_003425625.1	GCA_003425625.1_01539	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031680.1	1556284	1557678
GCA_016648855.1	GCA_016648855.1_00106	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JACLQU010000001.1	112503	114239
GCA_016648855.1	GCA_016648855.1_00107	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JACLQU010000001.1	114241	115965
GCA_016648855.1	GCA_016648855.1_01473	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JACLQU010000004.1	35048	36511
GCA_016648855.1	GCA_016648855.1_01474	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JACLQU010000004.1	36631	37848
GCA_016648855.1	GCA_016648855.1_01488	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JACLQU010000004.1	49420	49848
GCA_015679285.1	GCA_015679285.1_02912	cblA	CblA family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	249	296	80.74	95.82	239	WP_005827792.1	CblA family class A beta-lactamase	NF012099.1	class A beta-lactamase, subclass A2	CP064937.1	3319363	3320112
GCA_015679285.1	GCA_015679285.1_02989	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP064937.1	3417806	3419731
GCA_017655685.1	GCA_017655685.1_00241	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.60	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP040414.1	189785	191428
GCA_017655685.1	GCA_017655685.1_00629	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040414.1	574709	575083
GCA_963393145.1	GCA_963393145.1_00090	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.55	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJOD010000001.1	76701	78080
GCA_963393145.1	GCA_963393145.1_00294	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJOD010000002.1	71591	73117
GCA_963393145.1	GCA_963393145.1_00481	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJOD010000003.1	84080	84943
GCA_963393145.1	GCA_963393145.1_00482	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJOD010000003.1	84960	86198
GCA_963393145.1	GCA_963393145.1_01665	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJOD010000015.1	24730	25635
GCA_916438435.1	GCA_916438435.1_00296	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	332	641	51.79	99.70	332	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	CAKAHD010000001.1	313842	314840
GCA_916438435.1	GCA_916438435.1_00503	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAKAHD010000001.1	563878	564843
GCA_916438435.1	GCA_916438435.1_02485	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAKAHD010000002.1	1128403	1129593
GCA_916438435.1	GCA_916438435.1_02897	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAKAHD010000002.1	1584855	1585655
GCA_002933415.1	GCA_002933415.1_00141	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	309	147	93.88	44.20	138	ABG05788.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	PSNY01000001.1	130996	131925
GCA_002933415.1	GCA_002933415.1_01011	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	97.68	50.17	303	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	PSNY01000015.1	38417	39316
GCA_002933415.1	GCA_002933415.1_01290	aac(3)-I	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	158	156	91.03	66.90	142	WP_034006142.1	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	PSNY01000019.1	2616	3092
GCA_002933415.1	GCA_002933415.1_02321	aadA6	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA6	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	281	281	100.00	100.00	281	WP_022675713.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA6	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	PSNY01000034.1	92	937
GCA_002156805.1	GCA_002156805.1_00768	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP021252.1	767252	767698
GCA_002156805.1	GCA_002156805.1_02011	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP021252.1	2078576	2080357
GCA_002156805.1	GCA_002156805.1_02018	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.61	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CP021252.1	2086415	2087956
GCA_002156805.1	GCA_002156805.1_02020	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP021252.1	2089553	2090407
GCA_002156805.1	GCA_002156805.1_02031	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP021252.1	2096557	2097999
GCA_004138065.1	GCA_004138065.1_01619	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	SBIF01000037.1	707	2488
GCA_004138065.1	GCA_004138065.1_02028	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	SBIF01000056.1	226	1080
GCA_003040695.1	GCA_003040695.1_01068	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	PZDH01000011.1	1161	1541
GCA_003040695.1	GCA_003040695.1_01436	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	80.89	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PZDH01000017.1	13492	14781
GCA_003040695.1	GCA_003040695.1_02017	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	PZDH01000037.1	11915	12316
GCA_003040695.1	GCA_003040695.1_02018	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PZDH01000037.1	12334	13623
GCA_003040695.1	GCA_003040695.1_02019	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	PZDH01000037.1	13623	13937
GCA_003040695.1	GCA_003040695.1_02220	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	96.44	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	PZDH01000069.1	153	998
GCA_000157355.2	GCA_000157355.2_02351	vanC	D-alanine--D-serine ligase VanC2/3	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	350	350	100.00	99.14	350	WP_063856681.1	D-alanine--D-serine ligase VanC2/3	NF012214.1	D-alanine--D-serine ligase VanC	CP004856.1	2508043	2509095
GCA_000157355.2	GCA_000157355.2_02352	vanXY-C	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	190	190	100.00	98.95	190	WP_010749757.1	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	NF000380.1	D,D-carboxypeptidase/D,D-dipeptidase VanXY	CP004856.1	2509092	2509664
GCA_000157355.2	GCA_000157355.2_02353	vanTc	membrane-bound serine racemase VanT	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	700	700	100.00	97.86	700	WP_063856759.1	membrane-bound serine racemase VanT	NF033132.1	membrane-bound serine racemase VanT	CP004856.1	2509661	2511763
GCA_000157355.2	GCA_000157355.2_02354	vanR-C	vancomycin resistance response regulator transcription factor VanR-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	231	231	100.00	99.57	231	WP_005228837.1	vancomycin resistance response regulator transcription factor VanR-C	NF000403.1	vancomycin resistance response regulator transcription factor VanR-C	CP004856.1	2511862	2512557
GCA_000157355.2	GCA_000157355.2_02355	vanS-C	vancomycin resistance histidine kinase VanS-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	376	376	100.00	99.73	376	WP_034869172.1	vancomycin resistance histidine kinase VanS-C	NF033091.0	vancomycin resistance histidine kinase VanS	CP004856.1	2512547	2513677
GCA_003352365.1	GCA_003352365.1_00902	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP031239.1	887161	888021
GCA_003352365.1	GCA_003352365.1_01168	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	123	100.00	44.12	136	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP031239.1	1157956	1158378
GCA_003352365.1	GCA_003352365.1_01356	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.57	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031239.1	1355206	1356600
GCA_001839105.1	GCA_001839105.1_02301	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	KV840052.1	58324	59169
GCA_001839105.1	GCA_001839105.1_02304	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	95.24	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	KV840052.1	61022	61402
GCA_001839105.1	GCA_001839105.1_02306	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KV840052.1	61708	62997
GCA_001839105.1	GCA_001839105.1_02497	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KV840056.1	58103	59176
GCA_902488705.1	GCA_902488705.1_00820	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	HMM	86	81	91.36	43.04	79	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	CABTXE010000008.1	38393	38653
GCA_902488705.1	GCA_902488705.1_00821	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	477	631	73.85	47.22	468	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABTXE010000008.1	38650	40083
GCA_902488705.1	GCA_902488705.1_04509	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	479	631	73.85	47.35	471	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABTXE010000123.1	3710	5149
GCA_902488705.1	GCA_902488705.1_04617	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	277	272	99.26	59.35	278	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CABTXE010000132.1	4442	5275
GCA_029926915.1	GCA_029926915.1_00033	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREFB010000010.1	30928	31308
GCA_029926915.1	GCA_029926915.1_00034	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREFB010000010.1	31298	33055
GCA_029926915.1	GCA_029926915.1_00035	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREFB010000010.1	33162	34007
GCA_029926915.1	GCA_029926915.1_00361	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAREFB010000016.1	7880	9424
GCA_029926915.1	GCA_029926915.1_00362	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAREFB010000016.1	9602	10168
GCA_029926915.1	GCA_029926915.1_00364	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAREFB010000016.1	11472	12371
GCA_029926915.1	GCA_029926915.1_00365	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAREFB010000016.1	12470	13936
GCA_029926915.1	GCA_029926915.1_00367	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JAREFB010000017.1	655	3729
GCA_029926915.1	GCA_029926915.1_00370	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JAREFB010000017.1	6141	6545
GCA_029926915.1	GCA_029926915.1_00371	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JAREFB010000017.1	6762	7505
GCA_029926915.1	GCA_029926915.1_01987	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.96	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAREFB010000007.1	4772	6415
GCA_029926915.1	GCA_029926915.1_02082	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREFB010000007.1	96287	96634
GCA_029926915.1	GCA_029926915.1_02086	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.78	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFB010000007.1	98800	100089
GCA_030176235.1	GCA_030176235.1_01030	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUQ010000029.1	803	1657
GCA_003626055.1	GCA_003626055.1_01547	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZGS01000006.1	65860	66801
GCA_000192905.2	GCA_000192905.2_01660	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	AERC01000010.1	78995	79936
GCA_003813165.1	GCA_003813165.1_02502	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	96.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP033886.1	22116	24230
GCA_002879755.1	GCA_002879755.1_01886	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	PNRP01000007.1	22840	24759
GCA_002902725.1	GCA_002902725.1_01193	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	PPRT01000031.1	101485	102558
GCA_002902725.1	GCA_002902725.1_01785	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPRT01000048.1	21436	22725
GCA_022318425.1	GCA_022318425.1_00974	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	371	371	100.00	100.00	371	EHE72460.1	multidrug efflux MFS transporter PmrA	NA	NA	CP090883.1	912313	913428
GCA_014335065.1	GCA_014335065.1_01016	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	PDHA01000003.1	108888	109742
GCA_014335065.1	GCA_014335065.1_01196	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	PDHA01000002.1	7136	9055
GCA_014335065.1	GCA_014335065.1_01197	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	PDHA01000002.1	9220	10074
GCA_014335065.1	GCA_014335065.1_01567	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.49	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	PDHA01000046.1	3498	5279
GCA_014335065.1	GCA_014335065.1_01733	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	PDHA01000049.1	100	936
GCA_014335065.1	GCA_014335065.1_01734	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	PDHA01000049.1	936	1739
GCA_014335065.1	GCA_014335065.1_01746	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	PDHA01000052.1	88	903
GCA_014335065.1	GCA_014335065.1_01868	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	PDHA01000044.1	141037	142212
GCA_001809225.1	GCA_001809225.1_01917	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.13	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV796545.1	67254	68108
GCA_009755665.1	GCA_009755665.1_00818	ant(3)	ANT(3)-I family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	HMM	465	262	97.33	66.27	255	WP_004356282.1	ANT(3)-I family aminoglycoside nucleotidyltransferase	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP046622.1	889961	891358
GCA_009755665.1	GCA_009755665.1_00967	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	82.52	57.63	118	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP046622.1	1047911	1048306
GCA_009755665.1	GCA_009755665.1_03320	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	336	295	97.63	73.36	289	WP_063842263.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP046622.1	3571190	3572200
GCA_009755665.1	GCA_009755665.1_03985	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	263	275	93.45	63.04	257	WP_117407753.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP046622.1	4279829	4280620
GCA_000738405.1	GCA_000738405.1_00567	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JFCM01000028.1	1138	3057
GCA_000738405.1	GCA_000738405.1_00953	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JFCM01000045.1	508	2427
GCA_000738405.1	GCA_000738405.1_00961	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JFCM01000046.1	508	2427
GCA_000738405.1	GCA_000738405.1_01005	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JFCM01000047.1	508	2427
GCA_000738405.1	GCA_000738405.1_01220	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCM01000049.1	819	1673
GCA_000738405.1	GCA_000738405.1_01325	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JFCM01000053.1	14153	16072
GCA_000738405.1	GCA_000738405.1_01573	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JFCM01000066.1	9672	11453
GCA_000738405.1	GCA_000738405.1_01875	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JFCM01000076.1	15478	16899
GCA_000738405.1	GCA_000738405.1_01885	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.18	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCM01000076.1	24858	25712
GCA_000221985.1	GCA_000221985.1_00285	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP002925.1	236509	238428
GCA_000221985.1	GCA_000221985.1_00286	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP002925.1	239535	240272
GCA_000221985.1	GCA_000221985.1_00320	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP002925.1	266617	268080
GCA_000221985.1	GCA_000221985.1_00321	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP002925.1	268101	269318
GCA_000221985.1	GCA_000221985.1_01414	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP002925.1	1367699	1369120
GCA_019583395.1	GCA_019583395.1_00487	blaOXA-85	oxacillin-hydrolyzing class D beta-lactamase OXA-85	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	261	261	100.00	100.00	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	SZUT01000001.1	516837	517622
GCA_019583395.1	GCA_019583395.1_01720	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	SZUT01000004.1	12045	13964
GCA_000747315.1	GCA_000747315.1_00880	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	86.70	45.64	195	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP009215.1	828748	829401
GCA_000747315.1	GCA_000747315.1_00881	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.26	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP009215.1	829435	830859
GCA_000747315.1	GCA_000747315.1_00888	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP009215.1	838307	839161
GCA_000747315.1	GCA_000747315.1_00891	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP009215.1	840883	842304
GCA_029918815.1	GCA_029918815.1_00885	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JARDBU010000002.1	29718	31010
GCA_900478735.1	GCA_900478735.1_01188	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.78	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LS483496.1	1186827	1188221
GCA_900478735.1	GCA_900478735.1_01459	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LS483496.1	1457943	1459583
GCA_009496735.1	GCA_009496735.1_01521	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIIT01000005.1	109469	110668
GCA_016403265.1	GCA_016403265.1_00013	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	181	253	62.06	96.23	159	WP_011116967.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NA	NA	CP066289.1	10499	11044
GCA_016403265.1	GCA_016403265.1_00759	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	441	593	74.37	99.09	441	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP066289.1	867871	869196
GCA_016403265.1	GCA_016403265.1_00763	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	322	593	54.30	99.07	322	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP066289.1	873517	874485
GCA_016403265.1	GCA_016403265.1_00772	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.33	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP066289.1	880708	882489
GCA_016403265.1	GCA_016403265.1_00801	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP066289.1	912762	913937
GCA_016403265.1	GCA_016403265.1_00802	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	209	278	75.18	99.52	209	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	CP066289.1	914141	914770
GCA_016403265.1	GCA_016403265.1_00803	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP066289.1	914977	915396
GCA_016403265.1	GCA_016403265.1_00806	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP066289.1	917081	917896
GCA_016403265.1	GCA_016403265.1_01751	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP066289.1	1970355	1971776
GCA_016403265.1	GCA_016403265.1_02113	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	520	513	100.00	97.66	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CP066289.1	2375380	2376942
GCA_016403265.1	GCA_016403265.1_02115	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP066289.1	2378520	2379374
GCA_943914625.1	GCA_943914625.1_01315	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	640	92.97	100.00	595	WP_063856422.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CALUCT010000086.1	494	2281
GCA_022291155.1	GCA_022291155.1_00595	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAANHK010000001.1	631103	632395
GCA_022291155.1	GCA_022291155.1_01070	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAANHK010000001.1	1069137	1069622
GCA_022291155.1	GCA_022291155.1_02478	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAANHK010000008.1	1454	1834
GCA_022291155.1	GCA_022291155.1_02479	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAANHK010000008.1	1824	3581
GCA_022291155.1	GCA_022291155.1_02480	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAANHK010000008.1	3688	4533
GCA_022291155.1	GCA_022291155.1_02494	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	459	459	100.00	99.78	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAANHK010000010.1	1953	3332
GCA_022291155.1	GCA_022291155.1_02514	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAANHK010000014.1	80	1519
GCA_022291155.1	GCA_022291155.1_02516	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAANHK010000005.1	405	890
GCA_022291155.1	GCA_022291155.1_02525	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAANHK010000007.1	4783	5577
GCA_022291155.1	GCA_022291155.1_02526	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAANHK010000007.1	5670	6212
GCA_022291155.1	GCA_022291155.1_02527	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAANHK010000007.1	6209	7117
GCA_022291155.1	GCA_022291155.1_02528	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAANHK010000007.1	7422	8159
GCA_014931315.1	GCA_014931315.1_01074	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP063112.1	1096418	1097278
GCA_900683665.1	GCA_900683665.1_02600	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CAACYH010000004.1	2679537	2681462
GCA_001069335.1	GCA_001069335.1_00515	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JWAK01000015.1	177175	178638
GCA_001069335.1	GCA_001069335.1_00516	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JWAK01000015.1	178758	179975
GCA_001069335.1	GCA_001069335.1_00600	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JWAK01000017.1	1697	2125
GCA_003627135.1	GCA_003627135.1_01174	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.99	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CP032620.1	1192745	1194469
GCA_003627135.1	GCA_003627135.1_01175	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	92.73	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CP032620.1	1194471	1196207
GCA_003627135.1	GCA_003627135.1_01395	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP032620.1	1439327	1440544
GCA_003627135.1	GCA_003627135.1_01396	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP032620.1	1440664	1442127
GCA_015260355.1	GCA_015260355.1_00705	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZWU010000001.1	79691	80881
GCA_900324315.1	GCA_900324315.1_00154	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	279	250	100.00	96.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	LT992468.1	125514	126353
GCA_900324315.1	GCA_900324315.1_00321	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LT992468.1	315824	317116
GCA_900324315.1	GCA_900324315.1_00503	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LT992468.1	460784	461164
GCA_900324315.1	GCA_900324315.1_00504	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LT992468.1	461154	462911
GCA_900324315.1	GCA_900324315.1_00505	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LT992468.1	463018	463863
GCA_900324315.1	GCA_900324315.1_00602	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	LT992468.1	531596	531946
GCA_900324315.1	GCA_900324315.1_00607	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	LT992468.1	534160	534651
GCA_900324315.1	GCA_900324315.1_00686	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	LT992468.1	589008	589142
GCA_900324315.1	GCA_900324315.1_00850	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	LT992468.1	752900	754342
GCA_900324315.1	GCA_900324315.1_01108	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	LT992468.1	992143	993108
GCA_900324315.1	GCA_900324315.1_01109	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	LT992468.1	993676	994623
GCA_900324315.1	GCA_900324315.1_01110	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	LT992468.1	994625	995602
GCA_900324315.1	GCA_900324315.1_01326	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	LT992468.1	1224576	1226105
GCA_900324315.1	GCA_900324315.1_01362	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	98.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	LT992468.1	1272894	1273946
GCA_900324315.1	GCA_900324315.1_01449	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LT992468.1	1362452	1364458
GCA_900324315.1	GCA_900324315.1_01463	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	LT992468.1	1376442	1377821
GCA_900324315.1	GCA_900324315.1_01547	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	LT992468.1	1462515	1463873
GCA_900324315.1	GCA_900324315.1_01740	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.67	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	LT992468.1	1690316	1691671
GCA_900324315.1	GCA_900324315.1_02384	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LT992468.1	2308514	2310433
GCA_001683135.1	GCA_001683135.1_00748	inhA2	M6 family metalloprotease immune inhibitor InhA2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	799	799	100.00	100.00	799	AAP24685.1	M6 family metalloprotease immune inhibitor InhA2	NA	NA	CP012720.1	688774	691173
GCA_001683135.1	GCA_001683135.1_00753	cerA	phospholipase CerA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	283	100.00	98.59	283	AAS39677.1	phospholipase CerA	NA	NA	CP012720.1	695038	695889
GCA_001683135.1	GCA_001683135.1_00754	sph	sphingomyelinase C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	333	338	98.52	99.70	333	AAP24691.1	sphingomyelinase C	NA	NA	CP012720.1	695963	696964
GCA_001683135.1	GCA_001683135.1_01345	inhA1	M6 family metalloprotease immune inhibitor InhA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	795	796	100.00	96.61	796	ADH05944.1	M6 family metalloprotease immune inhibitor InhA1	NA	NA	CP012720.1	1240385	1242772
GCA_001683135.1	GCA_001683135.1_01644	mphL	macrolide 2-phosphotransferase MphL	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	298	303	98.02	87.21	297	WP_002047670.1	macrolide 2-phosphotransferase MphL	NF038057.1	macrolide 2-phosphotransferase MphL	CP012720.1	1495351	1496247
GCA_001683135.1	GCA_001683135.1_01943	nheA	non-hemolytic enterotoxin NHE subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	386	386	100.00	97.93	386	AAS40892.1	non-hemolytic enterotoxin NHE subunit A	NA	NA	CP012720.1	1770877	1772037
GCA_001683135.1	GCA_001683135.1_01944	nheB	non-hemolytic enterotoxin NHE subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	402	402	100.00	98.51	402	AAS40893.1	non-hemolytic enterotoxin NHE subunit B	NA	NA	CP012720.1	1772069	1773277
GCA_001683135.1	GCA_001683135.1_02006	entFM	enterotoxin EntFM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	420	421	100.00	98.81	421	AFH83235.1	enterotoxin EntFM	NF040678.1	enterotoxin EntFM	CP012720.1	1838276	1839538
GCA_001683135.1	GCA_001683135.1_02093	fosB	FosBx1 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	138	100.00	89.13	138	WP_000943772.1	FosBx1 family fosfomycin resistance bacillithiol transferase	NF041541.1	FosBx1 family fosfomycin resistance bacillithiol transferase	CP012720.1	1916610	1917026
GCA_001683135.1	GCA_001683135.1_02450	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	219	98.63	57.87	216	WP_087344902.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP012720.1	2247045	2247695
GCA_001683135.1	GCA_001683135.1_02539	bla	class A beta-lactamase Bla1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	306	309	99.03	99.67	306	WP_011053164.1	class A beta-lactamase Bla1	NF033096.1	class A beta-lactamase Bla1	CP012720.1	2328532	2329452
GCA_001683135.1	GCA_001683135.1_02566	hlyII	hemolysin II HlyII	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	240	412	58.25	96.25	240	AAP10457.1	hemolysin II HlyII	NA	NA	CP012720.1	2353035	2353757
GCA_001683135.1	GCA_001683135.1_02567	hlyIIR	hemolysin II regulator HlyIIR	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	201	201	100.00	99.50	201	AAO74585.1	hemolysin II regulator HlyIIR	NA	NA	CP012720.1	2354288	2354893
GCA_001683135.1	GCA_001683135.1_02568	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	82.52	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP012720.1	2355035	2356513
GCA_001683135.1	GCA_001683135.1_02671	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	210	210	98.10	66.67	207	WP_071218948.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP012720.1	2447866	2448498
GCA_001683135.1	GCA_001683135.1_03208	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	184	184	100.00	100.00	184	WP_000054744.1	streptothricin N-acetyltransferase SatA	NA	NA	CP012720.1	2934025	2934579
GCA_001683135.1	GCA_001683135.1_03361	alo	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	512	512	100.00	100.00	512	AAP27127.1	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	NA	NA	CP012720.1	3086990	3088528
GCA_001683135.1	GCA_001683135.1_03504	bla2	BcII family subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	EXACTP	256	256	100.00	100.00	256	WP_000799223.1	BcII family subclass B1 metallo-beta-lactamase	NF033095.1	BcII family subclass B1 metallo-beta-lactamase	CP012720.1	3217523	3218293
GCA_001683135.1	GCA_001683135.1_03872	plcA	phosphatidylinositol diacylglycerol-lyase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	329	329	100.00	100.00	329	AAP27624.1	phosphatidylinositol diacylglycerol-lyase	NA	NA	CP012720.1	3558347	3559336
GCA_001683135.1	GCA_001683135.1_04091	fosB2	fosfomycin resistance bacillithiol transferase FosB2	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_000938987.1	fosfomycin resistance bacillithiol transferase FosB2	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP012720.1	3778898	3779317
GCA_001683135.1	GCA_001683135.1_05565	plcR	transcriptional regulator PlcR	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	213	285	74.74	98.12	213	AAT61178.1	transcriptional regulator PlcR	NA	NA	CP012720.1	5082629	5083270
GCA_001836225.1	GCA_001836225.1_00769	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.16	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KV827775.1	61392	62681
GCA_001836225.1	GCA_001836225.1_02369	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KV827789.1	71522	72595
GCA_022689385.1	GCA_022689385.1_00136	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXO010000011.1	31332	31751
GCA_022689385.1	GCA_022689385.1_01878	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXO010000003.1	146683	147756
GCA_022689385.1	GCA_022689385.1_02216	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXO010000005.1	113011	114303
GCA_001059615.1	GCA_001059615.1_00209	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JUMN01000030.1	941	1795
GCA_001059615.1	GCA_001059615.1_01415	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JUMN01000081.1	21630	23054
GCA_025170155.2	GCA_025170155.2_00403	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	459	459	100.00	100.00	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP098466.2	391403	392782
GCA_025170155.2	GCA_025170155.2_01288	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	280	301	91.36	98.18	275	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP098466.2	1243337	1244179
GCA_025170155.2	GCA_025170155.2_01433	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	412	412	100.00	100.00	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP098466.2	1391704	1392942
GCA_025170155.2	GCA_025170155.2_01434	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	99.52	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP098466.2	1393193	1393825
GCA_025170155.2	GCA_025170155.2_01436	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	99.23	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP098466.2	1394462	1396030
GCA_025170155.2	GCA_025170155.2_01761	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	507	100.00	99.80	507	AAD54074.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP098466.2	1701650	1703173
GCA_003044925.1	GCA_003044925.1_00436	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	POXM01000001.1	458375	460294
GCA_003044925.1	GCA_003044925.1_02046	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	POXM01000008.1	52807	53667
GCA_003044925.1	GCA_003044925.1_02048	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	POXM01000008.1	54900	55715
GCA_003044925.1	GCA_003044925.1_02049	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	POXM01000008.1	55776	56579
GCA_003044925.1	GCA_003044925.1_02050	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	POXM01000008.1	56579	57415
GCA_002148255.1	GCA_002148255.1_00179	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_009305318.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP021140.1	214046	215965
GCA_025150455.1	GCA_025150455.1_03250	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXSU010000092.1	4712	6112
GCA_001914075.1	GCA_001914075.1_00802	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	639	92.80	98.82	593	WP_050618045.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	MKYA01000007.1	559	2346
GCA_002951505.1	GCA_002951505.1_01025	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP014567.1	1011281	1012921
GCA_002951505.1	GCA_002951505.1_01093	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	CP014567.1	1081429	1082067
GCA_002951505.1	GCA_002951505.1_01109	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP014567.1	1099855	1100226
GCA_002951505.1	GCA_002951505.1_01110	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP014567.1	1100226	1101983
GCA_002951505.1	GCA_002951505.1_01111	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP014567.1	1102083	1104089
GCA_002951505.1	GCA_002951505.1_01116	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP014567.1	1107519	1108262
GCA_002951505.1	GCA_002951505.1_01117	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP014567.1	1108479	1108883
GCA_002951505.1	GCA_002951505.1_01148	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP014567.1	1137334	1138626
GCA_002951505.1	GCA_002951505.1_01152	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP014567.1	1142309	1142656
GCA_002951505.1	GCA_002951505.1_01202	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP014567.1	1193535	1194827
GCA_002951505.1	GCA_002951505.1_01350	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP014567.1	1333614	1334459
GCA_002951505.1	GCA_002951505.1_01351	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP014567.1	1334566	1336323
GCA_002951505.1	GCA_002951505.1_01352	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP014567.1	1336313	1336693
GCA_022487785.1	GCA_022487785.1_01375	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVHA010000002.1	157336	158625
GCA_022487785.1	GCA_022487785.1_01379	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKVHA010000002.1	162311	162658
GCA_022487785.1	GCA_022487785.1_01400	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVHA010000002.1	181757	182149
GCA_022487785.1	GCA_022487785.1_01401	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVHA010000002.1	182167	183459
GCA_022487785.1	GCA_022487785.1_01478	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVHA010000002.1	256926	258218
GCA_022487785.1	GCA_022487785.1_02491	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKVHA010000008.1	12219	13685
GCA_002871315.1	GCA_002871315.1_01313	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	PNFQ01000004.1	117400	118599
GCA_001814445.1	GCA_001814445.1_01219	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV816463.1	140399	142039
GCA_001814445.1	GCA_001814445.1_01489	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV816463.1	418741	420660
GCA_002073275.2	GCA_002073275.2_00130	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.21	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP020402.2	138230	139756
GCA_002073275.2	GCA_002073275.2_01001	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP020402.2	996265	997833
GCA_002073275.2	GCA_002073275.2_01005	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP020402.2	999502	1000134
GCA_002073275.2	GCA_002073275.2_01006	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.54	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP020402.2	1000542	1001780
GCA_002073275.2	GCA_002073275.2_01126	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP020402.2	1136962	1137867
GCA_002073275.2	GCA_002073275.2_01887	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP020402.2	1919523	1920902
GCA_025146315.1	GCA_025146315.1_01760	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	300	96.00	74.74	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP102256.1	2256819	2257709
GCA_025146315.1	GCA_025146315.1_02401	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	94.58	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP102256.1	2947147	2948478
GCA_009728485.1	GCA_009728485.1_00677	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	VVIQ01000001.1	212965	214155
GCA_009728485.1	GCA_009728485.1_02069	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	VVIQ01000007.1	35467	36432
GCA_027689245.1	GCA_027689245.1_00793	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAQFEX010000011.1	33074	33919
GCA_027689245.1	GCA_027689245.1_00794	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAQFEX010000011.1	34026	35783
GCA_027689245.1	GCA_027689245.1_00795	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAQFEX010000011.1	35773	36153
GCA_027689245.1	GCA_027689245.1_01739	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAQFEX010000005.1	72353	72919
GCA_027689245.1	GCA_027689245.1_01740	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAQFEX010000005.1	73097	74641
GCA_027689245.1	GCA_027689245.1_02148	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAQFEX010000009.1	37734	39026
GCA_027689245.1	GCA_027689245.1_02152	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQFEX010000009.1	42709	43056
GCA_003755025.1	GCA_003755025.1_02670	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	302	97.68	57.48	301	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	RJVL01000006.1	177169	178059
GCA_019375585.1	GCA_019375585.1_01433	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCF010000003.1	140813	142003
GCA_000006885.1	GCA_000006885.1_00965	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AE005672.3	918103	919302
GCA_902509495.1	GCA_902509495.1_00048	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LR735429.1	53232	55238
GCA_902509495.1	GCA_902509495.1_00049	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	LR735429.1	55338	57095
GCA_902509495.1	GCA_902509495.1_00050	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	LR735429.1	57095	57466
GCA_902509495.1	GCA_902509495.1_00054	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	LR735429.1	59664	61103
GCA_902509495.1	GCA_902509495.1_00070	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR735429.1	79669	80958
GCA_902509495.1	GCA_902509495.1_00073	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LR735429.1	83136	83483
GCA_902509495.1	GCA_902509495.1_00159	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	96	142	62.68	94.38	89	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	LR735429.1	184968	185258
GCA_902509495.1	GCA_902509495.1_01908	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LR735429.1	1986647	1987492
GCA_902509495.1	GCA_902509495.1_01909	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LR735429.1	1987599	1989356
GCA_902509495.1	GCA_902509495.1_01910	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LR735429.1	1989346	1989726
GCA_902509495.1	GCA_902509495.1_02240	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.44	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR735429.1	2291853	2293145
GCA_902509495.1	GCA_902509495.1_02473	aac(6)-Ie	aminoglycoside N-acetyltransferase AAC(6)-Ie	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	HMM	291	491	57.43	100.00	282	WP_012655884.1	aminoglycoside N-acetyltransferase AAC(6)-Ie	NF000507.1	aminoglycoside N-acetyltransferase AAC(6)-Ie	LR735430.1	4634	5509
GCA_902509495.1	GCA_902509495.1_02475	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	LR735430.1	6685	8151
GCA_902509495.1	GCA_902509495.1_02476	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	LR735430.1	8250	9149
GCA_902509495.1	GCA_902509495.1_02478	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	LR735430.1	10448	11008
GCA_902509495.1	GCA_902509495.1_02479	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	LR735430.1	11192	12736
GCA_000737145.1	GCA_000737145.1_00001	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	96.26	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KL810966.1	159	1844
GCA_000737145.1	GCA_000737145.1_00002	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	KL810966.1	1883	2308
GCA_000737145.1	GCA_000737145.1_00558	nreB	nickel resistance MFS transporter NreB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	416	416	100.00	98.08	416	ADY84088.1	nickel resistance MFS transporter NreB	NA	NA	KL810966.1	560281	561531
GCA_000737145.1	GCA_000737145.1_00988	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001112624.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	KL810966.1	1010028	1010816
GCA_000737145.1	GCA_000737145.1_01103	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	KL810966.1	1133625	1134440
GCA_000737145.1	GCA_000737145.1_02027	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	397	397	100.00	100.00	397	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	KL810966.1	2099552	2100745
GCA_000737145.1	GCA_000737145.1_02214	blaADC-158	extended-spectrum class C beta-lactamase ADC-158	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	383	383	100.00	100.00	383	WP_001211227.1	extended-spectrum class C beta-lactamase ADC-158	NF000425.2	ADC family extended-spectrum class C beta-lactamase	KL810966.1	2309203	2310354
GCA_000737145.1	GCA_000737145.1_02628	amvA	multidrug efflux MFS transporter AmvA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	492	492	100.00	98.98	492	ACQ82816.1	multidrug efflux MFS transporter AmvA	NA	NA	KL810966.1	2707125	2708603
GCA_000737145.1	GCA_000737145.1_03183	blaOXA-98	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_001021777.1	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	NF000268.2	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase	KL810966.1	3293654	3294478
GCA_000737145.1	GCA_000737145.1_03707	abaF	fosfomycin efflux MFS transporter AbaF	plus	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	429	429	100.00	100.00	429	ABO11759.2	fosfomycin efflux MFS transporter AbaF	NA	NA	KL810966.1	3825790	3827079
GCA_009914785.1	GCA_009914785.1_00190	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VTSN01000094.1	1496	3136
GCA_009914785.1	GCA_009914785.1_00246	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	VTSN01000137.1	2063	2485
GCA_019391785.1	GCA_019391785.1_01376	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXQY010000026.1	15759	17684
GCA_030224835.1	GCA_030224835.1_00465	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JASOVA010000001.1	196446	196865
GCA_030224835.1	GCA_030224835.1_01412	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JASOVA010000003.1	125359	126432
GCA_030224835.1	GCA_030224835.1_01554	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASOVA010000003.1	277499	278791
GCA_019930005.1	GCA_019930005.1_01161	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	99.48	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAHZQP010000003.1	56180	57904
GCA_019930005.1	GCA_019930005.1_01162	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	96.54	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAHZQP010000003.1	57906	59642
GCA_022070565.1	GCA_022070565.1_00957	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035236.1	902793	903992
GCA_014131755.1	GCA_014131755.1_02470	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.33	75.78	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP040530.1	3223444	3224325
GCA_014131755.1	GCA_014131755.1_02883	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040530.1	3686858	3687184
GCA_014131755.1	GCA_014131755.1_03355	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	99.77	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP040530.1	4304395	4305726
GCA_014131755.1	GCA_014131755.1_03589	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	44.66	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040530.1	4568368	4568694
GCA_900186865.1	GCA_900186865.1_01651	emrC	multidrug efflux transporter outer membrane subunit EmrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	497	497	100.00	98.39	497	CAQ45062.1	multidrug efflux transporter outer membrane subunit EmrC	NA	NA	LT906480.1	1712655	1714148
GCA_900186865.1	GCA_900186865.1_01652	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	393	393	100.00	100.00	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	LT906480.1	1714160	1715341
GCA_900186865.1	GCA_900186865.1_01653	emrB	multidrug efflux MFS transporter permease subunit EmrB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	528	528	100.00	99.81	528	CAQ45064.1	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	LT906480.1	1715349	1716935
GCA_900186865.1	GCA_900186865.1_02201	aph(3)-IIc	aminoglycoside O-phosphotransferase APH(3)-IIc	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	314	267	93.63	99.60	250	WP_012479999.1	aminoglycoside O-phosphotransferase APH(3)-IIc	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	LT906480.1	2252718	2253662
GCA_900186865.1	GCA_900186865.1_02405	aph(6)	APH(6) family putative aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	270	270	99.63	98.88	269	WP_012480135.1	APH(6) family putative aminoglycoside O-phosphotransferase	NF012160.0	APH(6) family putative aminoglycoside O-phosphotransferase	LT906480.1	2482382	2483194
GCA_900186865.1	GCA_900186865.1_02477	copB	copper-binding protein CopB	plus	STRESS	METAL	COPPER	COPPER	EXACTP	422	422	100.00	100.00	422	ADR70748.1	copper-binding protein CopB	NA	NA	LT906480.1	2556194	2557462
GCA_900186865.1	GCA_900186865.1_02478	copA	laccase-like oxidase CopA	plus	STRESS	METAL	COPPER	COPPER	PARTIALP	556	623	89.25	99.28	556	ADR70747.1	laccase-like oxidase CopA	NA	NA	LT906480.1	2557459	2559129
GCA_900186865.1	GCA_900186865.1_02660	blaL1	L1 family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	307	290	100.00	99.66	290	WP_032966056.1	L1 family subclass B3 metallo-beta-lactamase	NF033106.1	L1 family subclass B3 metallo-beta-lactamase	LT906480.1	2755009	2755932
GCA_900186865.1	GCA_900186865.1_03029	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	50.00	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	LT906480.1	3157643	3157918
GCA_900186865.1	GCA_900186865.1_03611	aac(6)-Iz	aminoglycoside N-acetyltransferase AAC(6)-Iz	core	AMR	AMR	AMINOGLYCOSIDE	TOBRAMYCIN	EXACTP	153	153	100.00	100.00	153	WP_024956926.1	aminoglycoside N-acetyltransferase AAC(6)-Iz	NF000138.1	aminoglycoside N-acetyltransferase AAC(6)-Iz	LT906480.1	3775012	3775473
GCA_900186865.1	GCA_900186865.1_03718	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	304	100.00	70.72	304	WP_063842700.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	LT906480.1	3896272	3897183
GCA_900186865.1	GCA_900186865.1_04054	smeF	multidrug efflux RND transporter outer membrane subunit SmeF	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	461	466	98.71	98.26	460	CAC14596.1	multidrug efflux RND transporter outer membrane subunit SmeF	NA	NA	LT906480.1	4281404	4282789
GCA_900186865.1	GCA_900186865.1_04347	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	144	150	85.33	56.25	128	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	LT906480.1	4588391	4588825
GCA_030219165.1	GCA_030219165.1_00168	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASORM010000011.1	77094	77504
GCA_030219165.1	GCA_030219165.1_00992	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASORM010000021.1	7372	7773
GCA_030219165.1	GCA_030219165.1_01791	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASORM010000042.1	808	1662
GCA_022688935.1	GCA_022688935.1_00234	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCYF010000016.1	13716	14096
GCA_022688935.1	GCA_022688935.1_00235	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCYF010000016.1	14086	15843
GCA_022688935.1	GCA_022688935.1_00236	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCYF010000016.1	15950	16795
GCA_022688935.1	GCA_022688935.1_00251	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	69.57	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCYF010000017.1	10164	10583
GCA_022688935.1	GCA_022688935.1_00583	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCYF010000001.1	317321	318613
GCA_022688935.1	GCA_022688935.1_00931	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JALCYF010000026.1	186	1625
GCA_022688935.1	GCA_022688935.1_00936	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JALCYF010000028.1	1044	1787
GCA_022688935.1	GCA_022688935.1_00938	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JALCYF010000029.1	1204	1527
GCA_009717595.1	GCA_009717595.1_00026	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYV01000010.1	17923	19386
GCA_009717595.1	GCA_009717595.1_00027	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYV01000010.1	19506	20723
GCA_009717595.1	GCA_009717595.1_00300	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.39	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	WMYV01000001.1	106754	108232
GCA_009717595.1	GCA_009717595.1_00571	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	WMYV01000001.1	402342	404261
GCA_009717595.1	GCA_009717595.1_00603	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMYV01000001.1	431295	433019
GCA_009717595.1	GCA_009717595.1_00604	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMYV01000001.1	433021	434757
GCA_001838205.1	GCA_001838205.1_00547	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV836005.1	23669	24523
GCA_001838205.1	GCA_001838205.1_01766	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV836039.1	3532	5313
GCA_000375525.1	GCA_000375525.1_01629	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	AQXC01000009.1	287	1462
GCA_000375525.1	GCA_000375525.1_02254	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	AQXC01000019.1	975	1826
GCA_000375525.1	GCA_000375525.1_02263	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	AQXC01000019.1	9708	10562
GCA_013047165.1	GCA_013047165.1_00953	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP053210.1	907068	908267
GCA_022869565.1	GCA_022869565.1_00067	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	CP064359.1	65481	65816
GCA_022869565.1	GCA_022869565.1_00068	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP064359.1	65874	67517
GCA_022869565.1	GCA_022869565.1_00069	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP064359.1	67599	68249
GCA_022869565.1	GCA_022869565.1_00113	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP064359.1	109330	110619
GCA_022869565.1	GCA_022869565.1_00116	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP064359.1	112797	113144
GCA_022869565.1	GCA_022869565.1_00197	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP064359.1	202141	202569
GCA_022869565.1	GCA_022869565.1_01596	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP064359.1	1642569	1642949
GCA_022869565.1	GCA_022869565.1_01597	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.21	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP064359.1	1642939	1644696
GCA_022869565.1	GCA_022869565.1_01598	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP064359.1	1644803	1645648
GCA_022869565.1	GCA_022869565.1_02504	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP064362.1	5081	5926
GCA_022869565.1	GCA_022869565.1_02505	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.15	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP064362.1	6033	7790
GCA_022869565.1	GCA_022869565.1_02506	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP064362.1	7780	8160
GCA_024104475.1	GCA_024104475.1_00621	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHAVI010000019.1	18449	20455
GCA_024104475.1	GCA_024104475.1_01209	catA	type A-7 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	215	215	100.00	100.00	215	WP_002489529.1	type A-7 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JAHAVI010000023.1	228	875
GCA_024104475.1	GCA_024104475.1_01528	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHAVI010000003.1	53001	53420
GCA_024104475.1	GCA_024104475.1_01846	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHAVI010000004.1	163194	164486
GCA_024104475.1	GCA_024104475.1_02155	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHAVI010000006.1	146437	147510
GCA_003351465.1	GCA_003351465.1_00276	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.78	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031241.1	287383	288777
GCA_030546225.1	GCA_030546225.1_00474	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAUONO010000001.1	177867	179084
GCA_030546225.1	GCA_030546225.1_00475	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAUONO010000001.1	179204	180667
GCA_030546225.1	GCA_030546225.1_00481	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAUONO010000001.1	184101	184529
GCA_030546225.1	GCA_030546225.1_00830	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAUONO010000002.1	45303	47222
GCA_030546225.1	GCA_030546225.1_01549	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAUONO010000005.1	86037	87695
GCA_030503475.1	GCA_030503475.1_00201	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAUKOZ010000013.1	13087	14379
GCA_030503475.1	GCA_030503475.1_00205	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAUKOZ010000013.1	18062	18409
GCA_030503475.1	GCA_030503475.1_01181	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAUKOZ010000002.1	230386	230766
GCA_030503475.1	GCA_030503475.1_01182	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAUKOZ010000002.1	230756	232513
GCA_030503475.1	GCA_030503475.1_01183	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAUKOZ010000002.1	232620	233465
GCA_030503475.1	GCA_030503475.1_01268	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	482	514	93.77	100.00	482	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAUKOZ010000002.1	315544	316992
GCA_030503475.1	GCA_030503475.1_01269	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAUKOZ010000002.1	317271	317831
GCA_030503475.1	GCA_030503475.1_01731	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JAUKOZ010000005.1	71922	72419
GCA_030503475.1	GCA_030503475.1_01747	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAUKOZ010000005.1	88230	89870
GCA_959023915.1	GCA_959023915.1_02350	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	249	93.57	46.61	236	WP_193683783.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	CAUFDN010000037.1	17078	17854
GCA_001697965.1	GCA_001697965.1_00857	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016677.1	861414	862793
GCA_001697965.1	GCA_001697965.1_01696	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016677.1	1739824	1741062
GCA_001697965.1	GCA_001697965.1_01697	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016677.1	1741470	1742102
GCA_001697965.1	GCA_001697965.1_01699	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016677.1	1742927	1744495
GCA_001697965.1	GCA_001697965.1_01899	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016677.1	1954998	1956524
GCA_019929085.1	GCA_019929085.1_01332	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHZOV010000003.1	131974	133614
GCA_019929085.1	GCA_019929085.1_01841	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHZOV010000004.1	214716	216635
GCA_019929085.1	GCA_019929085.1_01842	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAHZOV010000004.1	217743	218480
GCA_008586745.1	GCA_008586745.1_00154	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP043770.1	156981	158375
GCA_003044565.1	GCA_003044565.1_00249	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	POXG01000001.1	272205	273584
GCA_003944115.1	GCA_003944115.1_01977	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJPD01000007.1	169723	170940
GCA_003944115.1	GCA_003944115.1_01978	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJPD01000007.1	171060	172523
GCA_003944115.1	GCA_003944115.1_01983	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJPD01000007.1	174264	174692
GCA_002073635.2	GCA_002073635.2_01676	aac(3)-Ih	aminoglycoside N-acetyltransferase AAC(3)-Ih	plus	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	153	152	100.00	98.04	153	ABL71428.1	aminoglycoside N-acetyltransferase AAC(3)-Ih	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP020442.2	1673082	1673543
GCA_003369895.1	GCA_003369895.1_00466	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_063856111.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LGOZ01000001.1	555552	557471
GCA_003369895.1	GCA_003369895.1_00881	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LGOZ01000002.1	351674	353314
GCA_003369895.1	GCA_003369895.1_01099	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	LGOZ01000002.1	624812	626290
GCA_008373895.1	GCA_008373895.1_01382	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	RAQW01000026.1	1412	3331
GCA_008373895.1	GCA_008373895.1_01388	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	RAQW01000026.1	7407	9188
GCA_008373895.1	GCA_008373895.1_01422	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	RAQW01000029.1	195	1736
GCA_008373895.1	GCA_008373895.1_01685	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	RAQW01000033.1	4685	5131
GCA_008373895.1	GCA_008373895.1_01696	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	RAQW01000036.1	771	1190
GCA_008373895.1	GCA_008373895.1_01697	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	RAQW01000036.1	1190	2026
GCA_008373895.1	GCA_008373895.1_01699	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	RAQW01000036.1	2230	3405
GCA_008373895.1	GCA_008373895.1_01713	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	RAQW01000004.1	3273	4715
GCA_008373895.1	GCA_008373895.1_02055	aac(6)-Ib	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	BLASTP	209	184	100.00	99.46	184	WP_063840280.1	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	RAQW01000005.1	143799	144428
GCA_008373895.1	GCA_008373895.1_02057	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	258	263	98.48	99.61	259	WP_046622360.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	RAQW01000005.1	144510	145286
GCA_008373895.1	GCA_008373895.1_02058	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	RAQW01000005.1	145450	145797
GCA_008373895.1	GCA_008373895.1_02059	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	RAQW01000005.1	145791	146630
GCA_008373895.1	GCA_008373895.1_02098	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RAQW01000050.1	69	923
GCA_008373895.1	GCA_008373895.1_02273	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	RAQW01000061.1	94	909
GCA_009378925.1	GCA_009378925.1_01453	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCX01000007.1	110727	111668
GCA_016766935.1	GCA_016766935.1_00747	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	43.69	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP068489.1	960156	960482
GCA_016766935.1	GCA_016766935.1_00891	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	300	98.67	39.39	297	WP_005795628.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP068489.1	1111159	1112079
GCA_016766935.1	GCA_016766935.1_01730	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP068489.1	2002436	2003395
GCA_037911985.1	GCA_037911985.1_01517	blaOXA-85	oxacillin-hydrolyzing class D beta-lactamase OXA-85	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	261	261	100.00	100.00	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	CP084154.1	1563272	1564057
GCA_037911985.1	GCA_037911985.1_02303	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP084154.1	2343880	2345799
GCA_019375945.1	GCA_019375945.1_00503	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCU010000001.1	687013	687978
GCA_019375945.1	GCA_019375945.1_01932	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.38	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCU010000005.1	34541	36466
GCA_019375945.1	GCA_019375945.1_02174	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCU010000007.1	17865	18665
GCA_001514475.1	GCA_001514475.1_00715	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	131	121	100.00	50.37	135	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BCNL01000003.1	42115	42510
GCA_009496375.1	GCA_009496375.1_00566	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WIKC01000002.1	32690	33907
GCA_009496375.1	GCA_009496375.1_00567	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WIKC01000002.1	34027	35490
GCA_009496375.1	GCA_009496375.1_00707	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIKC01000002.1	180677	181876
GCA_009496375.1	GCA_009496375.1_01116	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	WIKC01000003.1	230453	232372
GCA_000185265.1	GCA_000185265.1_01450	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	GL622183.1	1464831	1465259
GCA_002813535.1	GCA_002813535.1_00092	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP025076.1	84505	85704
GCA_002813535.1	GCA_002813535.1_01010	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP025076.1	948419	949213
GCA_000026685.1	GCA_000026685.1_03777	aac(2)-Ie	aminoglycoside N-acetyltransferase AAC(2)-Ie	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	182	182	100.00	100.00	182	WP_010908954.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	NF000054.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	FM211192.1	3039059	3039607
GCA_019329685.1	GCA_019329685.1_00091	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073859.1	92314	94320
GCA_019329685.1	GCA_019329685.1_00092	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073859.1	94420	96177
GCA_019329685.1	GCA_019329685.1_00093	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073859.1	96177	96548
GCA_019329685.1	GCA_019329685.1_00139	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073859.1	135514	135852
GCA_019329685.1	GCA_019329685.1_00140	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073859.1	135910	137553
GCA_019329685.1	GCA_019329685.1_00141	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073859.1	137635	138285
GCA_019329685.1	GCA_019329685.1_00151	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073859.1	147071	148369
GCA_019329685.1	GCA_019329685.1_00154	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073859.1	150538	150885
GCA_019329685.1	GCA_019329685.1_00231	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073859.1	233523	233759
GCA_019329685.1	GCA_019329685.1_00282	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073859.1	291557	292624
GCA_019329685.1	GCA_019329685.1_01770	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073859.1	1807703	1808083
GCA_019329685.1	GCA_019329685.1_01771	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073859.1	1808073	1809830
GCA_019329685.1	GCA_019329685.1_01772	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073859.1	1809937	1810782
GCA_019329685.1	GCA_019329685.1_01793	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073859.1	1829603	1830244
GCA_019329685.1	GCA_019329685.1_01914	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073859.1	1905872	1907311
GCA_019329685.1	GCA_019329685.1_01917	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073859.1	1909067	1909552
GCA_019329685.1	GCA_019329685.1_02749	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073860.1	6934	7494
GCA_019329685.1	GCA_019329685.1_02750	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073860.1	7679	9223
GCA_024668655.2	GCA_024668655.2_02377	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102561.2	2364553	2365845
GCA_024668655.2	GCA_024668655.2_02481	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP102562.2	1363	2208
GCA_024668655.2	GCA_024668655.2_02510	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP102562.2	22482	22862
GCA_030226275.1	GCA_030226275.1_00478	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	JASOXQ010000019.1	24094	25473
GCA_008726785.1	GCA_008726785.1_01117	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VYWH01000002.1	39648	40502
GCA_008726785.1	GCA_008726785.1_01121	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.82	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VYWH01000002.1	42223	43647
GCA_000162495.1	GCA_000162495.1_01179	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	GG730097.1	965285	967204
GCA_001812285.1	GCA_001812285.1_00620	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	640	92.97	100.00	595	WP_063856422.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV808406.1	727679	729466
GCA_001812285.1	GCA_001812285.1_00623	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.89	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV808406.1	731620	732474
GCA_001812285.1	GCA_001812285.1_01732	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV808410.1	309899	311539
GCA_000465255.1	GCA_000465255.1_01287	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	464	464	100.00	100.00	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP005967.1	1291780	1293174
GCA_000160875.1	GCA_000160875.1_00819	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	99.80	87.37	491	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	GG700805.1	433136	434614
GCA_025150635.1	GCA_025150635.1_00184	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXTA010000101.1	4568	5968
GCA_000318275.2	GCA_000318275.2_01582	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	347	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	KB291319.1	58755	59798
GCA_012972105.1	GCA_012972105.1_01667	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	154	92.86	61.54	143	WP_015860243.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP052769.1	1700215	1700634
GCA_012972105.1	GCA_012972105.1_02171	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	263	266	97.74	57.69	260	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP052769.1	2233782	2234573
GCA_012972105.1	GCA_012972105.1_03468	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	275	269	96.28	53.96	265	WP_338424127.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP052769.1	3556300	3557127
GCA_025567495.1	GCA_025567495.1_00135	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856415.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAOQJZ010000001.1	109532	111451
GCA_007004385.1	GCA_007004385.1_02036	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	VJNI01000013.1	2452	4020
GCA_007004385.1	GCA_007004385.1_02188	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	VJNI01000003.1	130692	131981
GCA_007004385.1	GCA_007004385.1_02191	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	VJNI01000003.1	134149	134496
GCA_007004385.1	GCA_007004385.1_02280	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VJNI01000003.1	224257	225897
GCA_022347225.1	GCA_022347225.1_00185	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.30	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRNF010000011.1	86304	87158
GCA_000227295.1	GCA_000227295.1_00802	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JH165054.1	865988	866398
GCA_030232755.1	GCA_030232755.1_01940	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPIG010000006.1	17291	18145
GCA_902377555.1	GCA_902377555.1_00709	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.55	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABLBV010000016.1	7210	8634
GCA_902377555.1	GCA_902377555.1_01398	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	479	513	93.37	92.28	479	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CABLBV010000026.1	98328	99767
GCA_900637765.1	GCA_900637765.1_01398	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LR134395.1	1308261	1309655
GCA_003044385.1	GCA_003044385.1_00905	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	POWV01000004.1	135227	136867
GCA_003044385.1	GCA_003044385.1_01372	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	POWV01000006.1	139605	141524
GCA_002208725.2	GCA_002208725.2_00150	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP022040.2	206259	207449
GCA_002208725.2	GCA_002208725.2_01817	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP022041.2	469380	469706
GCA_002775105.1	GCA_002775105.1_02519	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LTBH01000018.1	1329	2771
GCA_003425715.1	GCA_003425715.1_01620	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031690.1	1606137	1607531
GCA_905203035.1	GCA_905203035.1_01950	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089068.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CAJKUI010000049.1	1324	2529
GCA_009664675.1	GCA_009664675.1_00459	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP045960.1	463265	464644
GCA_009664675.1	GCA_009664675.1_01160	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP045960.1	1212161	1213066
GCA_009664675.1	GCA_009664675.1_01278	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.82	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP045960.1	1344394	1345632
GCA_009664675.1	GCA_009664675.1_01279	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP045960.1	1346036	1346668
GCA_009664675.1	GCA_009664675.1_01281	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP045960.1	1347493	1349061
GCA_009664675.1	GCA_009664675.1_01469	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP045960.1	1552006	1553532
GCA_015999505.1	GCA_015999505.1_00384	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	99.01	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP065535.1	393948	396062
GCA_015999505.1	GCA_015999505.1_01947	copB	copper/silver-translocating P-type ATPase CopB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	756	745	95.57	84.39	724	AFM70730.1	copper/silver-translocating P-type ATPase CopB	NA	NA	CP065535.1	1976492	1978762
GCA_015999505.1	GCA_015999505.1_02347	aac(6)-I	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	183	183	100.00	100.00	183	WP_016177698.1	aminoglycoside 6-N-acetyltransferase	NF000165.3	aminoglycoside 6-N-acetyltransferase	CP065535.1	2380801	2381352
GCA_015999505.1	GCA_015999505.1_03056	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	99.01	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP065536.1	119557	121671
GCA_015679735.1	GCA_015679735.1_00453	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030816.1	460369	461748
GCA_015679735.1	GCA_015679735.1_01193	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP030816.1	1218846	1219751
GCA_015679735.1	GCA_015679735.1_01321	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030816.1	1354951	1356189
GCA_015679735.1	GCA_015679735.1_01322	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030816.1	1356597	1357229
GCA_015679735.1	GCA_015679735.1_01324	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030816.1	1358054	1359622
GCA_015679735.1	GCA_015679735.1_01516	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030816.1	1561716	1563242
GCA_000755145.1	GCA_000755145.1_01129	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	144	100.00	63.19	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP009228.1	1212160	1212594
GCA_014596395.2	GCA_014596395.2_01123	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	MAYY02000001.1	1086584	1088503
GCA_014596395.2	GCA_014596395.2_01463	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	MAYY02000001.1	1416567	1417403
GCA_014596395.2	GCA_014596395.2_01464	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	MAYY02000001.1	1417403	1417822
GCA_014596395.2	GCA_014596395.2_01466	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	MAYY02000001.1	1418266	1419081
GCA_004114655.2	GCA_004114655.2_00507	helR	RNA polymerase recycling motor ATPase HelR	plus	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	780	722	97.51	64.21	746	CCA59315.1	RNA polymerase recycling motor ATPase HelR	NF041254.1	RNA polymerase recycling motor ATPase HelR	SDBQ02000001.1	541440	543782
GCA_004114655.2	GCA_004114655.2_00684	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	136	150	84.00	51.16	129	WP_063857695.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	SDBQ02000010.1	121848	122258
GCA_004114655.2	GCA_004114655.2_01224	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	224	218	93.12	50.98	204	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	SDBQ02000014.1	24990	25664
GCA_004114655.2	GCA_004114655.2_01225	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	477	631	73.69	44.33	476	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	SDBQ02000014.1	25711	27144
GCA_004114655.2	GCA_004114655.2_03149	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	394	391	99.74	64.03	392	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	SDBQ02000005.1	291278	292462
GCA_030122685.1	GCA_030122685.1_00375	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	432	641	67.39	99.77	432	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	CP126064.1	346570	347868
GCA_030122685.1	GCA_030122685.1_02184	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	432	641	67.39	99.07	432	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	CP126064.1	1877876	1879174
GCA_030122685.1	GCA_030122685.1_02197	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	261	266	98.12	99.23	261	WP_063844771.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP126064.1	1893882	1894667
GCA_030122685.1	GCA_030122685.1_02198	tet(X1)	tetracycline-inactivating monooxygenase Tet(X1)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	379	379	100.00	99.74	379	WP_204376222.1	tetracycline-inactivating monooxygenase Tet(X1)	NA	NA	CP126064.1	1894988	1896127
GCA_030122685.1	GCA_030122685.1_02199	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	PARTIALP	210	388	52.06	100.00	202	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NA	NA	CP126064.1	1896326	1896958
GCA_030122685.1	GCA_030122685.1_02201	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	CP126064.1	1897640	1898503
GCA_030122685.1	GCA_030122685.1_02622	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	90.67	52.94	272	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP126064.1	2221761	2222720
GCA_030122685.1	GCA_030122685.1_03911	blaMUN	MUN family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	291	302	96.36	100.00	291	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	CP126064.1	3272257	3273132
GCA_019929625.1	GCA_019929625.1_00526	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZPX010000001.1	545434	545862
GCA_019929625.1	GCA_019929625.1_00534	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAHZPX010000001.1	551781	553244
GCA_019929625.1	GCA_019929625.1_00535	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAHZPX010000001.1	553364	554581
GCA_030229425.1	GCA_030229425.1_02315	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPGX010000009.1	787	1638
GCA_030229425.1	GCA_030229425.1_02324	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPGX010000009.1	9519	10373
GCA_017504145.1	GCA_017504145.1_00191	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	303	88.45	40.30	268	WP_041881964.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP071807.1	229206	230090
GCA_016766755.1	GCA_016766755.1_00656	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.59	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP068550.1	707314	707724
GCA_016766755.1	GCA_016766755.1_02604	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP068550.1	2792513	2792914
GCA_002902455.1	GCA_002902455.1_01152	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	105	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	PPQW01000039.1	1542	1859
GCA_002902455.1	GCA_002902455.1_01153	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.83	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPQW01000039.1	1856	3145
GCA_002902455.1	GCA_002902455.1_01154	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	PPQW01000039.1	3163	3558
GCA_024295885.1	GCA_024295885.1_00922	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOW010000002.1	259169	260632
GCA_024295885.1	GCA_024295885.1_00923	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOW010000002.1	260752	261969
GCA_009717775.1	GCA_009717775.1_01311	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.56	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMZF01000002.1	307872	309596
GCA_009717775.1	GCA_009717775.1_01312	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMZF01000002.1	309598	311334
GCA_003493215.1	GCA_003493215.1_00851	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQKU01000003.1	134268	135173
GCA_003493215.1	GCA_003493215.1_01573	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQKU01000008.1	76321	77559
GCA_003493215.1	GCA_003493215.1_01574	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQKU01000008.1	77576	78439
GCA_003493215.1	GCA_003493215.1_01720	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQKU01000010.1	48081	49607
GCA_000741825.1	GCA_000741825.1_01554	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	275	94.91	60.15	261	WP_125064048.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	KN046795.1	1741481	1742263
GCA_000741825.1	GCA_000741825.1_03956	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	302	99.34	54.93	304	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	KN046795.1	4322685	4323596
GCA_000741825.1	GCA_000741825.1_03986	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	268	96.64	70.27	259	WP_114268491.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	KN046795.1	4360181	4360981
GCA_030295305.1	GCA_030295305.1_02388	erm(50)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(50)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	CLARITHROMYCIN/CLINDAMYCIN	EXACTP	263	263	100.00	100.00	263	WP_176453837.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(50)	NF000499.2	23S ribosomal RNA methyltransferase Erm	AP026713.1	8514	9305
GCA_030295305.1	GCA_030295305.1_02394	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	AP026713.1	13776	15695
GCA_002884795.1	GCA_002884795.1_00252	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	PNGW01000001.1	304672	306150
GCA_003342735.1	GCA_003342735.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP031131.1	40203	40607
GCA_003342735.1	GCA_003342735.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP031131.1	40824	41567
GCA_003342735.1	GCA_003342735.1_00039	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP031131.1	42868	44874
GCA_003342735.1	GCA_003342735.1_00040	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP031131.1	44974	45960
GCA_003342735.1	GCA_003342735.1_00087	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	450	450	100.00	100.00	450	WP_001100294.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP031131.1	99297	100649
GCA_003342735.1	GCA_003342735.1_00296	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP031131.1	334277	335632
GCA_003342735.1	GCA_003342735.1_01749	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP031131.1	1824403	1825695
GCA_003342735.1	GCA_003342735.1_01787	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA	CP031131.1	1854996	1855718
GCA_003342735.1	GCA_003342735.1_01788	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.87	235	ABD31004.1	serine protease SplA	NA	NA	CP031131.1	1855843	1856550
GCA_003342735.1	GCA_003342735.1_01793	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP031131.1	1860680	1861663
GCA_003342735.1	GCA_003342735.1_01794	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP031131.1	1861665	1862600
GCA_003342735.1	GCA_003342735.1_01802	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	99.60	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP031131.1	1868778	1869533
GCA_003342735.1	GCA_003342735.1_01803	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	256	261	100.00	94.25	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP031131.1	1869572	1870342
GCA_003342735.1	GCA_003342735.1_01804	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP031131.1	1870496	1871224
GCA_003342735.1	GCA_003342735.1_01805	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP031131.1	1871259	1871978
GCA_003342735.1	GCA_003342735.1_01806	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	99.61	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP031131.1	1872259	1873023
GCA_003342735.1	GCA_003342735.1_01942	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP031131.1	1982185	1983942
GCA_003342735.1	GCA_003342735.1_01943	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP031131.1	1984049	1984894
GCA_003342735.1	GCA_003342735.1_01969	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	82	116	70.69	98.78	82	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP031131.1	2009143	2009391
GCA_003342735.1	GCA_003342735.1_01975	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP031131.1	2011696	2012187
GCA_003342735.1	GCA_003342735.1_02048	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP031131.1	2066131	2066265
GCA_003342735.1	GCA_003342735.1_02195	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP031131.1	2219172	2220614
GCA_003342735.1	GCA_003342735.1_02366	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP031131.1	2367481	2367900
GCA_003342735.1	GCA_003342735.1_02449	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP031131.1	2456015	2456980
GCA_003342735.1	GCA_003342735.1_02450	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP031131.1	2457547	2458494
GCA_003342735.1	GCA_003342735.1_02451	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP031131.1	2458496	2459473
GCA_003342735.1	GCA_003342735.1_02676	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP031131.1	2699765	2701294
GCA_003342735.1	GCA_003342735.1_02713	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP031131.1	2744665	2745717
GCA_004101885.1	GCA_004101885.1_00229	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	228	232	98.71	71.74	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CP026120.1	214680	215366
GCA_004101885.1	GCA_004101885.1_00808	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	148	97.30	55.56	144	WP_128470137.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP026120.1	790194	790628
GCA_004101885.1	GCA_004101885.1_01358	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	80.69	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP026120.1	1315416	1316894
GCA_004101885.1	GCA_004101885.1_01409	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	215	100.00	68.84	215	WP_035203840.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP026120.1	1368135	1368782
GCA_004101885.1	GCA_004101885.1_03372	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	141	142	97.18	77.54	138	WP_204376221.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP026120.1	3263853	3264278
GCA_004101885.1	GCA_004101885.1_03469	msr	Msr family ABC-F type ribosomal protection protein	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	482	485	99.18	72.35	481	WP_101035417.1	Msr family ABC-F type ribosomal protection protein	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP026120.1	3341750	3343198
GCA_029917375.1	GCA_029917375.1_00241	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JARDEN010000015.1	1156	1479
GCA_029917375.1	GCA_029917375.1_00249	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JARDEN010000017.1	526	1011
GCA_029917375.1	GCA_029917375.1_00349	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JARDEN010000001.1	113799	114872
GCA_029917375.1	GCA_029917375.1_02191	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JARDEN010000006.1	60455	61744
GCA_018363015.1	GCA_018363015.1_01868	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	213	218	79.82	52.30	174	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP074376.1	1920241	1920882
GCA_018363015.1	GCA_018363015.1_01869	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	467	547	84.10	44.83	464	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP074376.1	1920909	1922312
GCA_018363015.1	GCA_018363015.1_02039	tet(V)	tetracycline efflux MFS transporter Tet(V)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	416	419	97.85	67.80	410	WP_003896589.1	tetracycline efflux MFS transporter Tet(V)	NF012178.0	tetracycline efflux MFS transporter Tet(V)	CP074376.1	2087290	2088540
GCA_018363015.1	GCA_018363015.1_02388	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	392	95.66	62.40	375	WP_003971483.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	CP074376.1	2467664	2468839
GCA_018363015.1	GCA_018363015.1_03869	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	294	98.98	65.76	295	WP_063842628.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP074376.1	4014474	4015385
GCA_018783925.1	GCA_018783925.1_00564	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	WQNK01000017.1	229384	231024
GCA_002804085.1	GCA_002804085.1_00413	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP024932.1	433005	434447
GCA_002804085.1	GCA_002804085.1_02290	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP024932.1	2378958	2379404
GCA_002804085.1	GCA_002804085.1_02292	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP024932.1	2380204	2381058
GCA_002804085.1	GCA_002804085.1_02304	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP024932.1	2392264	2394045
GCA_002804085.1	GCA_002804085.1_02311	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP024932.1	2400796	2402715
GCA_002073815.2	GCA_002073815.2_00267	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP020431.2	271835	273052
GCA_002073815.2	GCA_002073815.2_00268	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP020431.2	273172	274635
GCA_002073815.2	GCA_002073815.2_00274	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	59.85	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP020431.2	277165	277593
GCA_024722415.1	GCA_024722415.1_00875	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP102659.1	826869	827264
GCA_024722415.1	GCA_024722415.1_00876	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.90	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102659.1	827282	828571
GCA_024722415.1	GCA_024722415.1_00877	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP102659.1	828571	828885
GCA_024722415.1	GCA_024722415.1_02173	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP102659.1	2091000	2091401
GCA_024722415.1	GCA_024722415.1_02174	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	91.84	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102659.1	2091419	2092708
GCA_024722415.1	GCA_024722415.1_02189	vga	Vga family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	HMM	521	524	99.43	72.94	521	WP_063856936.1	Vga family ABC-F type ribosomal protection protein	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP102659.1	2107297	2108862
GCA_024722415.1	GCA_024722415.1_02205	fusC	FusC family fusidic acid resistance EF-G-binding protein	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	BLASTP	212	212	100.00	99.06	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	CP102659.1	2122245	2122883
GCA_024722415.1	GCA_024722415.1_02294	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.72	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102659.1	2206715	2208007
GCA_024722415.1	GCA_024722415.1_02678	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP102660.1	3472	4911
GCA_024722415.1	GCA_024722415.1_02679	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP102660.1	5110	6486
GCA_019330245.1	GCA_019330245.1_00827	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073904.1	806386	806871
GCA_019330245.1	GCA_019330245.1_00830	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073904.1	808627	810066
GCA_019330245.1	GCA_019330245.1_00951	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073904.1	885694	886335
GCA_019330245.1	GCA_019330245.1_00972	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073904.1	905155	906000
GCA_019330245.1	GCA_019330245.1_00973	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073904.1	906107	907864
GCA_019330245.1	GCA_019330245.1_00974	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073904.1	907854	908234
GCA_019330245.1	GCA_019330245.1_02462	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073904.1	2423316	2424383
GCA_019330245.1	GCA_019330245.1_02513	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073904.1	2482181	2482417
GCA_019330245.1	GCA_019330245.1_02590	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073904.1	2565055	2565402
GCA_019330245.1	GCA_019330245.1_02593	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073904.1	2567571	2568869
GCA_019330245.1	GCA_019330245.1_02603	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073904.1	2577655	2578305
GCA_019330245.1	GCA_019330245.1_02604	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073904.1	2578387	2580030
GCA_019330245.1	GCA_019330245.1_02605	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073904.1	2580088	2580426
GCA_019330245.1	GCA_019330245.1_02651	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073904.1	2619392	2619763
GCA_019330245.1	GCA_019330245.1_02652	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073904.1	2619763	2621520
GCA_019330245.1	GCA_019330245.1_02653	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073904.1	2621620	2623626
GCA_019330245.1	GCA_019330245.1_02792	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073903.1	4978	6522
GCA_019330245.1	GCA_019330245.1_02793	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073903.1	6707	7267
GCA_003044745.1	GCA_003044745.1_00441	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.64	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	POXW01000001.1	407386	408912
GCA_003044745.1	GCA_003044745.1_01148	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	POXW01000004.1	130948	132327
GCA_003044745.1	GCA_003044745.1_01298	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	93.93	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	POXW01000005.1	100039	101277
GCA_000314675.2	GCA_000314675.2_00010	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	754	631	83.99	44.28	533	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KB375282.1	8823	11087
GCA_000314675.2	GCA_000314675.2_02509	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	754	631	83.99	44.28	533	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KB375282.1	2632391	2634655
GCA_000314675.2	GCA_000314675.2_02519	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	754	631	83.99	44.28	533	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KB375283.1	118	2382
GCA_000314675.2	GCA_000314675.2_03978	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	754	631	83.99	44.28	533	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KB375283.1	1462215	1464479
GCA_030515715.1	GCA_030515715.1_02056	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.77	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100365.1	2194948	2195802
GCA_024462405.1	GCA_024462405.1_00504	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANGBL010000012.1	73786	75711
GCA_024462405.1	GCA_024462405.1_01745	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	331	300	97.00	50.17	291	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JANGBL010000004.1	74265	75260
GCA_030232395.1	GCA_030232395.1_00162	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.89	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJS010000012.1	30673	31527
GCA_030232395.1	GCA_030232395.1_00166	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPJS010000012.1	33255	34676
GCA_030232395.1	GCA_030232395.1_00183	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JASPJS010000012.1	46441	46887
GCA_030232395.1	GCA_030232395.1_01046	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPJS010000020.1	1422	2846
GCA_030232395.1	GCA_030232395.1_01047	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	216	87.50	46.15	195	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JASPJS010000020.1	2881	3534
GCA_018986335.1	GCA_018986335.1_00466	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHMHN010000001.1	44421	45266
GCA_018986335.1	GCA_018986335.1_00467	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.06	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHMHN010000001.1	45373	47130
GCA_018986335.1	GCA_018986335.1_00468	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHMHN010000001.1	47120	47500
GCA_018986335.1	GCA_018986335.1_01096	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHMHN010000002.1	238252	238647
GCA_018986335.1	GCA_018986335.1_01097	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.90	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHMHN010000002.1	238665	239954
GCA_018986335.1	GCA_018986335.1_01098	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAHMHN010000002.1	239954	240268
GCA_018986335.1	GCA_018986335.1_02000	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHMHN010000006.1	2365	2766
GCA_018986335.1	GCA_018986335.1_02001	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.01	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHMHN010000006.1	2784	4073
GCA_018986335.1	GCA_018986335.1_02091	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.19	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHMHN010000006.1	86104	87396
GCA_003599935.1	GCA_003599935.1_00465	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	PTTK01000001.1	26730	28151
GCA_001067535.1	GCA_001067535.1_00117	blaROB-1	broad-spectrum class A beta-lactamase ROB-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	305	305	100.00	100.00	305	WP_005618523.1	broad-spectrum class A beta-lactamase ROB-1	NF033568.1	ROB family class A beta-lactamase	JURA01000002.1	75	992
GCA_018128205.1	GCA_018128205.1_01388	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072374.1	1616416	1617612
GCA_027681865.1	GCA_027681865.1_01057	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	731	100.00	82.76	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	JAQDAS010000013.1	36437	38635
GCA_027681865.1	GCA_027681865.1_01391	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	90.17	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	JAQDAS010000016.1	51141	52034
GCA_027681865.1	GCA_027681865.1_02685	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	142	139	100.00	79.86	139	WP_004857515.1	FosA family fosfomycin resistance glutathione transferase	NF000221.4	FosA family fosfomycin resistance glutathione transferase	JAQDAS010000003.1	111905	112333
GCA_027681865.1	GCA_027681865.1_04308	blaCTX-M	CTX-M family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	291	291	100.00	99.66	291	WP_063859945.1	extended-spectrum class A beta-lactamase CTX-M-124	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	JAQDAS010000008.1	12275	13150
GCA_003043935.1	GCA_003043935.1_01185	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	PYXE01000001.1	1546280	1548205
GCA_003043935.1	GCA_003043935.1_01830	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	PYXE01000001.1	2334253	2335443
GCA_937989635.1	GCA_937989635.1_00715	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CALKBH010000068.1	1291	2085
GCA_937989635.1	GCA_937989635.1_00716	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CALKBH010000068.1	2178	2720
GCA_937989635.1	GCA_937989635.1_00718	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	PARTIALP	240	245	86.12	99.05	211	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CALKBH010000068.1	3058	3780
GCA_001071365.1	GCA_001071365.1_00185	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	579	579	100.00	100.00	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	JVBN01000009.1	9084	10823
GCA_001071365.1	GCA_001071365.1_00186	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	93.09	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	JVBN01000009.1	10820	12559
GCA_001071365.1	GCA_001071365.1_01197	aac(6)-Im	aminoglycoside N-acetyltransferase AAC(6)-Im	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	EXACTP	178	178	100.00	100.00	178	WP_010708502.1	aminoglycoside N-acetyltransferase AAC(6)-Im	NF000016.1	aminoglycoside N-acetyltransferase AAC(6)-Im	JVBN01000032.1	5373	5909
GCA_001071365.1	GCA_001071365.1_01198	aph(2)-IIa	aminoglycoside O-phosphotransferase APH(2)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	299	299	100.00	100.00	299	WP_016439437.1	aminoglycoside O-phosphotransferase APH(2)-IIa	NF000015.3	aminoglycoside O-phosphotransferase APH(2)-IIa	JVBN01000032.1	5953	6852
GCA_013315145.1	GCA_013315145.1_00493	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	250	405	60.00	100.00	243	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NA	NA	JABUHD010000001.1	633475	634227
GCA_013315145.1	GCA_013315145.1_00495	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JABUHD010000001.1	634813	636276
GCA_000559965.1	GCA_000559965.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	KK022591.1	41752	43758
GCA_000559965.1	GCA_000559965.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	KK022591.1	43858	44844
GCA_000559965.1	GCA_000559965.1_00144	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	KK022591.1	160936	162294
GCA_000559965.1	GCA_000559965.1_00347	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	KK022591.1	390604	391959
GCA_000559965.1	GCA_000559965.1_00385	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	KK022591.1	425188	425799
GCA_000559965.1	GCA_000559965.1_00863	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.11	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	KK022591.1	900511	901239
GCA_000559965.1	GCA_000559965.1_00864	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.52	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	KK022591.1	901263	901991
GCA_000559965.1	GCA_000559965.1_01485	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	KK022591.1	1563353	1564330
GCA_000559965.1	GCA_000559965.1_01486	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	KK022591.1	1564332	1565270
GCA_000559965.1	GCA_000559965.1_01661	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	KK022591.1	1711993	1712745
GCA_000559965.1	GCA_000559965.1_01834	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KK022591.1	1905076	1906368
GCA_000559965.1	GCA_000559965.1_01877	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	KK022591.1	1943610	1944326
GCA_000559965.1	GCA_000559965.1_01880	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	KK022591.1	1946101	1946823
GCA_000559965.1	GCA_000559965.1_01881	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	KK022591.1	1946948	1947655
GCA_000559965.1	GCA_000559965.1_01891	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	KK022591.1	1959304	1960287
GCA_000559965.1	GCA_000559965.1_01892	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	KK022591.1	1960289	1961224
GCA_000559965.1	GCA_000559965.1_02051	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	KK022591.1	2089735	2090085
GCA_000559965.1	GCA_000559965.1_02056	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	KK022591.1	2092299	2092790
GCA_000559965.1	GCA_000559965.1_02133	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	KK022591.1	2150446	2150580
GCA_000559965.1	GCA_000559965.1_02282	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.58	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	KK022591.1	2302629	2304071
GCA_000559965.1	GCA_000559965.1_02457	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	KK022591.1	2455819	2456238
GCA_000559965.1	GCA_000559965.1_02544	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	KK022591.1	2545478	2546443
GCA_000559965.1	GCA_000559965.1_02545	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	KK022591.1	2547010	2547957
GCA_000559965.1	GCA_000559965.1_02546	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	KK022591.1	2547959	2548936
GCA_000559965.1	GCA_000559965.1_02768	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	KK022591.1	2787499	2789028
GCA_000559965.1	GCA_000559965.1_02802	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KK022591.1	2832361	2833413
GCA_000340745.1	GCA_000340745.1_01751	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	92.31	66.67	204	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	KB454450.1	1827961	1828608
GCA_000235445.1	GCA_000235445.1_01685	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JH378834.1	27068	28987
GCA_000235445.1	GCA_000235445.1_02260	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.63	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JH378841.1	48663	50141
GCA_018373935.1	GCA_018373935.1_00102	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.26	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAHAGB010000001.1	112102	113580
GCA_018373935.1	GCA_018373935.1_01108	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAHAGB010000005.1	1201	2418
GCA_029917065.1	GCA_029917065.1_00041	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP123983.1	42556	44562
GCA_029917065.1	GCA_029917065.1_00086	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP123983.1	84118	84519
GCA_029917065.1	GCA_029917065.1_00087	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP123983.1	84537	85826
GCA_029917065.1	GCA_029917065.1_00107	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP123983.1	104337	104729
GCA_029917065.1	GCA_029917065.1_00108	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP123983.1	104747	106039
GCA_029917065.1	GCA_029917065.1_00182	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP123983.1	174484	175776
GCA_029917065.1	GCA_029917065.1_00678	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP123983.1	679862	680359
GCA_029917065.1	GCA_029917065.1_02483	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.22	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP123983.1	2422299	2423144
GCA_029917065.1	GCA_029917065.1_02484	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP123983.1	2423251	2425008
GCA_029917065.1	GCA_029917065.1_02485	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP123983.1	2424998	2425378
GCA_029917065.1	GCA_029917065.1_02495	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP123983.1	2433871	2435310
GCA_029917065.1	GCA_029917065.1_02580	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP123984.1	1208	1942
GCA_029917065.1	GCA_029917065.1_02581	qacJ	quaternary ammonium compound efflux SMR transporter QacJ	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	92.52	107	WP_011100750.1	quaternary ammonium compound efflux SMR transporter QacJ	NF012170.0	quaternary ammonium compound efflux SMR transporter QacJ	CP123985.1	61	384
GCA_030232805.1	GCA_030232805.1_01286	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASPJC010000024.1	31369	33288
GCA_030232805.1	GCA_030232805.1_01289	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASPJC010000024.1	36054	37835
GCA_030232805.1	GCA_030232805.1_01895	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJC010000047.1	507	1361
GCA_001813145.1	GCA_001813145.1_01166	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV811594.1	1104	1958
GCA_022484865.1	GCA_022484865.1_00750	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JAKVER010000001.1	374814	375311
GCA_022484865.1	GCA_022484865.1_00903	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVER010000002.1	23914	25203
GCA_022484865.1	GCA_022484865.1_00907	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKVER010000002.1	28889	29236
GCA_001455125.1	GCA_001455125.1_02029	blaOXA	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	261	261	100.00	99.62	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	CP013328.1	2101450	2102235
GCA_016726485.1	GCA_016726485.1_00925	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP068103.1	956546	958465
GCA_000506705.1	GCA_000506705.1_00633	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AYRP01000004.1	59525	60742
GCA_000506705.1	GCA_000506705.1_00634	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AYRP01000004.1	60763	62226
GCA_000506705.1	GCA_000506705.1_00672	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AYRP01000004.1	93092	95011
GCA_000506705.1	GCA_000506705.1_01897	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	347	399	86.97	98.27	347	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AYRP01000028.1	14630	15673
GCA_021117155.1	GCA_021117155.1_00453	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP088218.1	491388	492680
GCA_021117155.1	GCA_021117155.1_02000	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	149	139	99.28	71.74	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP088218.1	1998038	1998487
GCA_021117155.1	GCA_021117155.1_02551	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP088219.1	14918	15763
GCA_021117155.1	GCA_021117155.1_02552	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP088219.1	15870	17627
GCA_021117155.1	GCA_021117155.1_02553	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP088219.1	17617	17997
GCA_003641225.1	GCA_003641225.1_01305	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP032739.1	1325272	1327191
GCA_003641225.1	GCA_003641225.1_01681	vanS-C	vancomycin resistance histidine kinase VanS-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	376	376	100.00	98.40	376	WP_034869172.1	vancomycin resistance histidine kinase VanS-C	NF033091.0	vancomycin resistance histidine kinase VanS	CP032739.1	1726314	1727444
GCA_003641225.1	GCA_003641225.1_01682	vanR-C	vancomycin resistance response regulator transcription factor VanR-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	231	231	100.00	100.00	231	WP_005228837.1	vancomycin resistance response regulator transcription factor VanR-C	NF000403.1	vancomycin resistance response regulator transcription factor VanR-C	CP032739.1	1727434	1728129
GCA_003641225.1	GCA_003641225.1_01683	vanTc	membrane-bound serine racemase VanT	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	700	706	100.00	97.03	706	WP_063856758.1	membrane-bound serine racemase VanT	NF033132.1	membrane-bound serine racemase VanT	CP032739.1	1728228	1730330
GCA_003641225.1	GCA_003641225.1_01684	vanXY-C	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	190	190	100.00	99.47	190	WP_010749757.1	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	NF000380.1	D,D-carboxypeptidase/D,D-dipeptidase VanXY	CP032739.1	1730327	1730899
GCA_003641225.1	GCA_003641225.1_01685	vanC	D-alanine--D-serine ligase VanC2/3	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	350	350	100.00	100.00	350	WP_063856670.1	D-alanine--D-serine ligase VanC2/3	NF012214.1	D-alanine--D-serine ligase VanC	CP032739.1	1730896	1731948
GCA_003641225.1	GCA_003641225.1_01874	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	133	95.49	58.59	128	WP_010989789.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP032739.1	1910786	1911196
GCA_003641225.1	GCA_003641225.1_03414	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	98.86	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP032739.1	3503564	3505678
GCA_003641225.1	GCA_003641225.1_03519	narB	ionophore ABC transporter permease subunit NarB	plus	AMR	AMR	IONOPHORE	MADURAMICIN/NARASIN/SALINOMYCIN	EXACTP	537	537	100.00	100.00	537	QHA94809.1	ionophore ABC transporter permease subunit NarB	NA	NA	CP032740.1	28260	29873
GCA_003641225.1	GCA_003641225.1_03520	narA	ionophore ABC transporter ATP-binding subunit NarA	plus	AMR	AMR	IONOPHORE	MADURAMICIN/NARASIN/SALINOMYCIN	EXACTP	293	293	100.00	100.00	293	QHA94808.1	ionophore ABC transporter ATP-binding subunit NarA	NA	NA	CP032740.1	29897	30778
GCA_003641225.1	GCA_003641225.1_03529	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	PARTIALP	96	180	51.11	100.00	92	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NA	NA	CP032740.1	37404	37694
GCA_003641225.1	GCA_003641225.1_03530	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP032740.1	37691	38599
GCA_003641225.1	GCA_003641225.1_03532	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP032740.1	38904	39641
GCA_003641225.1	GCA_003641225.1_03533	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP032740.1	40390	41184
GCA_003641225.1	GCA_003641225.1_03534	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP032740.1	41188	41925
GCA_003641225.1	GCA_003641225.1_03555	tcrB	copper-translocating P-type ATPase TcrB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	700	710	100.00	96.06	710	AAL05407.1	copper-translocating P-type ATPase TcrB	NA	NA	CP032740.1	60878	62980
GCA_902364735.1	GCA_902364735.1_00261	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	255	300	83.67	54.18	251	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CABJEV010000002.1	82	849
GCA_902364735.1	GCA_902364735.1_02822	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	314	321	98.44	71.20	316	WP_004348227.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CABJEV010000023.1	67	1011
GCA_902364735.1	GCA_902364735.1_03244	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CABJEV010000034.1	18274	20199
GCA_902364735.1	GCA_902364735.1_03386	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	PARTIALP	168	266	57.89	92.86	154	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NA	NA	CABJEV010000060.1	11	517
GCA_019456815.1	GCA_019456815.1_01991	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JACVSX010000008.1	108832	110049
GCA_019456815.1	GCA_019456815.1_01992	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JACVSX010000008.1	110070	111533
GCA_000613625.1	GCA_000613625.1_02383	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	BAJI01000001.1	122629	124554
GCA_000613625.1	GCA_000613625.1_02393	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	BAJI01000001.1	133867	134832
GCA_014495745.1	GCA_014495745.1_01007	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP061041.1	928921	930213
GCA_014495745.1	GCA_014495745.1_02572	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP061042.1	803	1183
GCA_014495745.1	GCA_014495745.1_02575	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP061042.1	2988	4454
GCA_014495745.1	GCA_014495745.1_02600	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP061042.1	24730	25473
GCA_014495745.1	GCA_014495745.1_02601	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP061042.1	25696	26094
GCA_014495745.1	GCA_014495745.1_02604	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP061042.1	29104	29949
GCA_030516215.1	GCA_030516215.1_01587	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.77	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100382.1	1645597	1646451
GCA_019375815.1	GCA_019375815.1_00991	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	316	321	90.97	99.66	292	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCP010000021.1	23723	24673
GCA_019375815.1	GCA_019375815.1_01396	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCP010000002.1	86561	87751
GCA_902374455.1	GCA_902374455.1_01472	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CABKQF010000004.1	14427	15806
GCA_001008275.1	GCA_001008275.1_00724	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.26	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LCTH01000026.1	10589	11983
GCA_001008275.1	GCA_001008275.1_01453	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LCTH01000049.1	35444	37084
GCA_028326495.1	GCA_028326495.1_01787	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMMX010000007.1	70517	71248
GCA_028326495.1	GCA_028326495.1_01905	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMMX010000009.1	49644	51563
GCA_000019265.1	GCA_000019265.1_01041	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP000936.1	989357	990556
GCA_000019265.1	GCA_000019265.1_01116	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP000936.1	1057708	1058136
GCA_000019265.1	GCA_000019265.1_01233	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP000936.1	1174416	1175066
GCA_000019265.1	GCA_000019265.1_01374	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP000936.1	1306025	1307944
GCA_000019265.1	GCA_000019265.1_01385	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP000936.1	1317862	1318599
GCA_000219605.1	GCA_000219605.1_01267	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP002881.1	1295271	1295507
GCA_000219605.1	GCA_000219605.1_01268	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP002881.1	1295504	1295869
GCA_000219605.1	GCA_000219605.1_01269	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.57	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP002881.1	1295887	1297572
GCA_000219605.1	GCA_000219605.1_01270	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP002881.1	1297644	1297919
GCA_000219605.1	GCA_000219605.1_01271	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP002881.1	1297932	1298282
GCA_000219605.1	GCA_000219605.1_01272	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP002881.1	1298354	1298788
GCA_000219605.1	GCA_000219605.1_02123	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	409	414	96.62	73.32	401	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP002881.1	2187041	2188270
GCA_000219605.1	GCA_000219605.1_02313	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	PARTIALP	720	949	75.76	91.10	719	ASF80763.1	heat shock survival AAA family ATPase ClpK	NA	NA	CP002881.1	2408569	2410731
GCA_000219605.1	GCA_000219605.1_02771	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	260	98.08	63.81	257	WP_032488481.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP002881.1	2879047	2879829
GCA_000219605.1	GCA_000219605.1_04296	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	97.79	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP002881.1	4508375	4511224
GCA_000219605.1	GCA_000219605.1_04297	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	97.35	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	CP002881.1	4511320	4511889
GCA_902373285.1	GCA_902373285.1_00999	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.29	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABKLQ010000012.1	57462	59102
GCA_008728815.1	GCA_008728815.1_00574	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP041722.1	618017	619309
GCA_008728815.1	GCA_008728815.1_00719	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	137	131	90.84	92.44	119	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP041722.1	774971	775384
GCA_008728815.1	GCA_008728815.1_00745	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP041722.1	798529	799602
GCA_008728815.1	GCA_008728815.1_02319	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP041722.1	2334456	2334875
GCA_008728815.1	GCA_008728815.1_02624	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP041722.1	2620878	2621258
GCA_008728815.1	GCA_008728815.1_02625	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP041722.1	2621248	2623005
GCA_008728815.1	GCA_008728815.1_02626	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP041722.1	2623112	2623957
GCA_026427495.1	GCA_026427495.1_00649	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084440.1	682398	683690
GCA_026427495.1	GCA_026427495.1_00815	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP084440.1	864653	865000
GCA_026427495.1	GCA_026427495.1_00819	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084440.1	867179	868468
GCA_026427495.1	GCA_026427495.1_00833	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP084440.1	882045	883118
GCA_026427495.1	GCA_026427495.1_01323	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP084440.1	1394636	1395055
GCA_026427495.1	GCA_026427495.1_02656	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP084441.1	20889	21269
GCA_026427495.1	GCA_026427495.1_02657	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	96.24	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP084441.1	21259	23016
GCA_026427495.1	GCA_026427495.1_02658	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP084441.1	23123	23968
GCA_026427495.1	GCA_026427495.1_02683	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP084442.1	12386	13231
GCA_026427495.1	GCA_026427495.1_02684	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP084442.1	13338	15095
GCA_026427495.1	GCA_026427495.1_02685	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP084442.1	15085	15465
GCA_003265025.1	GCA_003265025.1_00186	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP030094.1	210708	211508
GCA_003265025.1	GCA_003265025.1_00405	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP030094.1	442150	443115
GCA_003265025.1	GCA_003265025.1_02117	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP030095.1	346193	348118
GCA_003265025.1	GCA_003265025.1_02133	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP030095.1	362306	363106
GCA_003265025.1	GCA_003265025.1_02506	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP030095.1	773471	774271
GCA_000210875.1	GCA_000210875.1_00123	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	FQ312006.1	123680	124540
GCA_000210875.1	GCA_000210875.1_01880	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.14	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	FQ312006.1	1828351	1829745
GCA_022845675.1	GCA_022845675.1_00667	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	292	304	97.04	39.39	297	WP_064964607.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	AP025562.1	792094	792972
GCA_022845675.1	GCA_022845675.1_02805	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	AP025562.1	3383670	3385595
GCA_022845675.1	GCA_022845675.1_02834	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	PARTIALP	167	266	62.78	97.60	167	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NA	NA	AP025562.1	3415623	3416126
GCA_001813505.1	GCA_001813505.1_00308	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.74	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	KV812784.1	252059	253783
GCA_001813505.1	GCA_001813505.1_00309	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.01	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	KV812784.1	253785	255521
GCA_001813505.1	GCA_001813505.1_00943	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	59.85	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KV812784.1	900058	900486
GCA_001813505.1	GCA_001813505.1_00951	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV812784.1	906584	908047
GCA_001813505.1	GCA_001813505.1_00952	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV812784.1	908167	909384
GCA_017655825.1	GCA_017655825.1_00604	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	123	100.00	45.60	125	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040419.1	584041	584415
GCA_013414325.1	GCA_013414325.1_00851	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP058666.1	751500	753140
GCA_013414325.1	GCA_013414325.1_01361	spw	ANT(9) family aminoglycoside nucleotidyltransferase Spw	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	269	269	100.00	100.00	269	WP_002294509.1	ANT(9) family aminoglycoside nucleotidyltransferase Spw	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP058666.1	1255017	1255826
GCA_013414325.1	GCA_013414325.1_01746	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP058666.1	1643574	1645493
GCA_013414325.1	GCA_013414325.1_02089	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	580	580	100.00	99.48	580	EGJ25784.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP058666.1	1984476	1986218
GCA_013414325.1	GCA_013414325.1_02090	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	115	121	93.39	98.23	113	EGJ25783.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP058666.1	1986254	1986601
GCA_013414325.1	GCA_013414325.1_02091	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	123	123	100.00	99.19	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP058666.1	1986735	1987106
GCA_013414325.1	GCA_013414325.1_02092	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	88	97	90.72	98.86	88	EGO5141043.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP058666.1	1987108	1987374
GCA_013414325.1	GCA_013414325.1_02282	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	183	302	57.28	100.00	173	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	NA	CP058666.1	2178248	2178799
GCA_013414325.1	GCA_013414325.1_02284	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP058666.1	2179065	2180504
GCA_013414325.1	GCA_013414325.1_02290	lnu(B)	lincosamide nucleotidyltransferase Lnu(B)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	267	267	100.00	100.00	267	WP_002294514.1	lincosamide nucleotidyltransferase Lnu(B)	NF000235.3	lincosamide nucleotidyltransferase Lnu(B)	CP058666.1	2184910	2185713
GCA_013414325.1	GCA_013414325.1_02291	lsa(E)	ABC-F type ribosomal protection protein Lsa(E)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	EXACTP	494	494	100.00	100.00	494	WP_002294513.1	ABC-F type ribosomal protection protein Lsa(E)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP058666.1	2185767	2187251
GCA_002966655.1	GCA_002966655.1_01333	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.98	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP020010.1	1332897	1334291
GCA_000163715.1	GCA_000163715.1_00348	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GG770201.1	231073	232713
GCA_934232835.1	GCA_934232835.1_01849	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	PARTIALP	204	351	58.12	97.06	204	EGJ25786.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CAKQGB010000032.1	1872	2486
GCA_017309675.2	GCA_017309675.2_02755	cblA	CblA family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	296	296	100.00	96.28	296	WP_005827792.1	CblA family class A beta-lactamase	NF033098.1	CblA family class A beta-lactamase	CP084680.1	3269733	3270623
GCA_017309675.2	GCA_017309675.2_03217	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP084680.1	3777920	3779845
GCA_016313225.1	GCA_016313225.1_00270	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	73.91	138	WP_016922374.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP066224.1	235493	235912
GCA_016313225.1	GCA_016313225.1_01616	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	547	98.35	73.47	539	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP066224.1	1521473	1523116
GCA_016313225.1	GCA_016313225.1_01618	merR2	mercury resistance transcriptional regulator MerR2	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	129	129	99.22	83.59	128	AAD25959.1	mercury resistance transcriptional regulator MerR2	NA	NA	CP066224.1	1523997	1524386
GCA_016313225.1	GCA_016313225.1_01619	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	100.00	74.77	218	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP066224.1	1524519	1525172
GCA_016313225.1	GCA_016313225.1_02220	vga	Vga family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	HMM	524	524	99.24	55.38	520	WP_032495718.1	Vga family ABC-F type ribosomal protection protein	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP066224.1	2071857	2073431
GCA_002871975.1	GCA_002871975.1_01518	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	640	100.00	99.53	640	WP_063856422.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	PNHV01000005.1	129088	131010
GCA_022689255.1	GCA_022689255.1_00206	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXT010000012.1	47966	49039
GCA_022689255.1	GCA_022689255.1_01782	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXT010000003.1	31332	31751
GCA_022689255.1	GCA_022689255.1_02178	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXT010000005.1	62353	63645
GCA_900445575.1	GCA_900445575.1_02556	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	79.67	43.88	98	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UFTB01000001.1	2843108	2843461
GCA_001955865.1	GCA_001955865.1_00516	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	68.06	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	MRTT01000012.1	102832	103482
GCA_001955865.1	GCA_001955865.1_00781	tetB(58)	tetracycline efflux ABC transporter Tet(58) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	271	271	100.00	91.88	271	WP_071223302.1	tetracycline efflux ABC transporter Tet(58) subunit B	NA	NA	MRTT01000014.1	21312	22127
GCA_001955865.1	GCA_001955865.1_02896	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family A	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	175	169	97.63	64.24	165	AIQ64103.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	NF040503.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	MRTT01000027.1	5814	6341
GCA_001955865.1	GCA_001955865.1_02907	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	107	99.07	46.23	106	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	MRTT01000027.1	16556	16915
GCA_001955865.1	GCA_001955865.1_03060	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	214	212	99.06	76.67	210	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	MRTT01000028.1	70680	71324
GCA_001955865.1	GCA_001955865.1_04212	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	97.56	44.64	280	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	MRTT01000039.1	5980	6843
GCA_001955865.1	GCA_001955865.1_04483	taeA	ABC-F type ribosomal protection protein TaeA	core	AMR	AMR	PLEUROMUTILIN	TIAMULIN	BLASTP	651	648	100.00	91.71	651	WP_071223118.1	ABC-F type ribosomal protection protein TaeA	NA	NA	MRTT01000003.1	229214	231169
GCA_001955865.1	GCA_001955865.1_04911	aac(2)-IIb	kasugamycin N-acetyltransferase AAC(2)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	HMM	239	240	99.58	67.78	239	WP_071224044.1	kasugamycin N-acetyltransferase AAC(2)-IIb	NF033472.1	kasugamycin N-acetyltransferase AAC(2)-IIb	MRTT01000004.1	37317	38036
GCA_001955865.1	GCA_001955865.1_05848	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	312	304	92.11	66.90	287	WP_087344360.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	MRTT01000006.1	108345	109283
GCA_001955865.1	GCA_001955865.1_06179	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	498	494	99.60	62.40	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	MRTT01000007.1	138229	139725
GCA_003496485.1	GCA_003496485.1_01206	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQCO01000005.1	20562	21467
GCA_003496485.1	GCA_003496485.1_01702	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQCO01000010.1	14479	16005
GCA_003496485.1	GCA_003496485.1_01951	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQCO01000014.1	18193	19431
GCA_003496485.1	GCA_003496485.1_01952	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQCO01000014.1	19680	20312
GCA_003496485.1	GCA_003496485.1_01954	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQCO01000014.1	21104	22672
GCA_019703595.1	GCA_019703595.1_01678	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018773.1	1670149	1671543
GCA_000477795.1	GCA_000477795.1_00510	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	43.38	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AXMH01000001.1	545108	545518
GCA_007833855.1	GCA_007833855.1_00438	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP038242.1	477206	478498
GCA_007833855.1	GCA_007833855.1_02502	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	429	459	93.46	100.00	429	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP038249.1	92	1381
GCA_001598655.1	GCA_001598655.1_00112	blaBOR-1	class A beta-lactamase BOR-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	305	305	100.00	100.00	305	WP_010926363.1	class A beta-lactamase BOR-1	NF040659.1	BOR family class A beta-lactamase	BCZI01000001.1	117634	118551
GCA_025147785.1	GCA_025147785.1_01379	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.02	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXPR010000213.1	477	1877
GCA_001042655.1	GCA_001042655.1_00924	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AP012332.1	1149738	1151216
GCA_025311515.1	GCA_025311515.1_00104	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP104399.1	117323	119242
GCA_002243705.1	GCA_002243705.1_02234	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	HMM	76	81	90.12	53.25	77	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	CP020815.1	2001133	2001363
GCA_002243705.1	GCA_002243705.1_02235	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	HMM	100	98	95.92	69.15	94	AAA83975.1	mercuric transport protein MerT	NF033560.1	mercuric transport protein MerT	CP020815.1	2001376	2001678
GCA_002243705.1	GCA_002243705.1_02237	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	538	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP020815.1	2002019	2003635
GCA_030053435.1	GCA_030053435.1_01434	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JASFZT010000002.1	222723	223796
GCA_030053435.1	GCA_030053435.1_01575	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASFZT010000021.1	3624	4004
GCA_030053435.1	GCA_030053435.1_01576	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASFZT010000021.1	3994	5751
GCA_030053435.1	GCA_030053435.1_01577	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASFZT010000021.1	5858	6703
GCA_030053435.1	GCA_030053435.1_02342	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASFZT010000007.1	52413	53702
GCA_030012845.1	GCA_030012845.1_00043	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP118842.1	45454	47460
GCA_030012845.1	GCA_030012845.1_00071	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP118842.1	77846	79135
GCA_030012845.1	GCA_030012845.1_00188	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP118842.1	200756	201184
GCA_030012845.1	GCA_030012845.1_00892	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP118842.1	911383	912228
GCA_030012845.1	GCA_030012845.1_00893	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP118842.1	912335	914092
GCA_030012845.1	GCA_030012845.1_00894	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP118842.1	914082	914462
GCA_030012845.1	GCA_030012845.1_01926	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP118842.1	1980053	1980694
GCA_030012845.1	GCA_030012845.1_02499	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	429	459	93.46	100.00	429	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP118846.1	91	1380
GCA_030012845.1	GCA_030012845.1_02515	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP118846.1	12010	12855
GCA_030012845.1	GCA_030012845.1_02516	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP118846.1	12962	14719
GCA_030012845.1	GCA_030012845.1_02517	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP118846.1	14709	15089
GCA_030012845.1	GCA_030012845.1_02520	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP118846.1	16890	18356
GCA_900455835.1	GCA_900455835.1_00841	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	UGVF01000002.1	10450	10686
GCA_900455835.1	GCA_900455835.1_00842	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	UGVF01000002.1	10683	11048
GCA_900455835.1	GCA_900455835.1_00843	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UGVF01000002.1	11066	12751
GCA_900455835.1	GCA_900455835.1_00844	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	UGVF01000002.1	12823	13098
GCA_900455835.1	GCA_900455835.1_00845	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	UGVF01000002.1	13111	13461
GCA_900455835.1	GCA_900455835.1_00846	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	UGVF01000002.1	13533	13967
GCA_900455835.1	GCA_900455835.1_00857	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	UGVF01000002.1	24608	25042
GCA_900455835.1	GCA_900455835.1_00858	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	UGVF01000002.1	25114	25464
GCA_900455835.1	GCA_900455835.1_00859	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	UGVF01000002.1	25477	25752
GCA_900455835.1	GCA_900455835.1_00860	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UGVF01000002.1	25824	27509
GCA_900455835.1	GCA_900455835.1_00861	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	UGVF01000002.1	27527	27892
GCA_900455835.1	GCA_900455835.1_00862	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	UGVF01000002.1	27889	28125
GCA_900455835.1	GCA_900455835.1_01574	blaOXA	OXA-22 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	275	274	99.64	96.70	273	WP_063861776.1	benzylpenicillin-hydrolyzing class D beta-lactamase OXA-22	NF033509.1	OXA-22 family class D beta-lactamase	UGVF01000002.1	813458	814285
GCA_900455835.1	GCA_900455835.1_01731	blaOXA	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	271	271	100.00	98.15	271	WP_063864500.1	carbapenem-hydrolyzing class D beta-lactamase OXA-60	NF000395.3	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	UGVF01000002.1	986316	987131
GCA_002797185.1	GCA_002797185.1_02278	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	PENG01000002.1	371160	371960
GCA_002797185.1	GCA_002797185.1_02431	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	PENG01000002.1	528827	530752
GCA_002797185.1	GCA_002797185.1_02449	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	PENG01000002.1	546444	547244
GCA_000247225.2	GCA_000247225.2_00259	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AHLK01000062.1	42894	43313
GCA_000247225.2	GCA_000247225.2_01481	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AHLK01000036.1	407973	409265
GCA_000247225.2	GCA_000247225.2_02125	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	340	350	95.43	53.73	335	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AHLK01000012.1	36978	38000
GCA_008369805.1	GCA_008369805.1_02148	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.16	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP043615.1	2172812	2174926
GCA_017655645.1	GCA_017655645.1_00141	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040411.1	128064	128438
GCA_017655645.1	GCA_017655645.1_01595	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	547	631	87.64	90.05	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP040411.1	1615448	1617091
GCA_000467895.1	GCA_000467895.1_01928	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	KI259629.1	880	2070
GCA_916720365.1	GCA_916720365.1_00566	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAKAQX010000009.1	13720	14910
GCA_916720365.1	GCA_916720365.1_02244	catA16	type A-16 chloramphenicol O-acetyltransferase CatQ	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	219	219	100.00	98.63	219	WP_063843221.1	type A-16 chloramphenicol O-acetyltransferase CatQ	NF000491.1	type A chloramphenicol O-acetyltransferase	CAKAQX010000112.1	2716	3375
GCA_916720365.1	GCA_916720365.1_02410	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CAKAQX010000155.1	668	2593
GCA_028325865.1	GCA_028325865.1_00297	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.84	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQMJV010000013.1	48312	50048
GCA_028325865.1	GCA_028325865.1_00298	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.39	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQMJV010000013.1	50050	51774
GCA_028325865.1	GCA_028325865.1_00828	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQMJV010000001.1	305920	307137
GCA_028325865.1	GCA_028325865.1_00829	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQMJV010000001.1	307257	308720
GCA_028325865.1	GCA_028325865.1_00834	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQMJV010000001.1	310461	310889
GCA_946221375.1	GCA_946221375.1_01247	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.54	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAMIAM010000022.1	21932	22786
GCA_946221375.1	GCA_946221375.1_01556	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	479	513	93.37	94.36	479	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CAMIAM010000031.1	24722	26161
GCA_029961705.1	GCA_029961705.1_00677	blaOXA	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	PARTIALP	235	273	86.08	99.57	235	WP_026444036.1	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-816	NF012161.0	class D beta-lactamase	CP124683.1	578114	578821
GCA_029961705.1	GCA_029961705.1_01613	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	295	285	91.58	40.82	267	WP_063864745.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	CP124683.1	1386434	1387321
GCA_029961705.1	GCA_029961705.1_01828	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	397	97.98	77.38	389	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP124683.1	1581594	1582781
GCA_001866585.1	GCA_001866585.1_02203	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LLJJ01000013.1	73158	73568
GCA_005890485.1	GCA_005890485.1_01487	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQB01000049.1	29403	30536
GCA_000364325.1	GCA_000364325.1_01143	vanR-B	vancomycin resistance response regulator transcription factor VanR-B	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	219	219	100.00	100.00	219	WP_002317273.1	vancomycin resistance response regulator transcription factor VanR-B	NF000402.1	vancomycin resistance response regulator transcription factor VanR-B	KB822533.1	1204324	1204983
GCA_000364325.1	GCA_000364325.1_01144	vanS-B	vancomycin resistance histidine kinase VanS-B	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	447	447	100.00	100.00	447	WP_002382867.1	vancomycin resistance histidine kinase VanS-B	NF033090.1	vancomycin resistance histidine kinase VanS-B	KB822533.1	1204986	1206329
GCA_000364325.1	GCA_000364325.1_01145	vanY-B	D-Ala-D-Ala carboxypeptidase VanY-B	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	268	268	100.00	100.00	268	WP_002416070.1	D-Ala-D-Ala carboxypeptidase VanY-B	NF000473.1	VanY-B/VanY-G family D-Ala-D-Ala carboxypeptidase	KB822533.1	1206500	1207306
GCA_000364325.1	GCA_000364325.1_01147	vanW-B	glycopeptide resistance accessory protein VanW-B	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	PARTIALP	149	271	54.98	100.00	149	WP_063856766.1	glycopeptide resistance accessory protein VanW-B	NA	NA	KB822533.1	1207701	1208150
GCA_000364325.1	GCA_000364325.1_01148	vanH-B	D-lactate dehydrogenase VanH-B	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	323	323	100.00	100.00	323	WP_002317268.1	D-lactate dehydrogenase VanH-B	NF000492.1	D-lactate dehydrogenase VanH	KB822533.1	1208147	1209118
GCA_000364325.1	GCA_000364325.1_01149	vanB	D-alanine--(R)-lactate ligase VanB	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	342	342	100.00	99.71	342	WP_014387148.1	D-alanine--(R)-lactate ligase VanB	NF012216.1	D-alanine--(R)-lactate ligase VanB	KB822533.1	1209111	1210139
GCA_000364325.1	GCA_000364325.1_01150	vanX-B	D-Ala-D-Ala dipeptidase VanX-B	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	202	202	100.00	100.00	202	WP_002317266.1	D-Ala-D-Ala dipeptidase VanX-B	NF033115.1	D-Ala-D-Ala dipeptidase VanX	KB822533.1	1210145	1210753
GCA_001423805.1	GCA_001423805.1_02784	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	140	137	88.32	49.60	125	WP_012695486.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	LMPI01000034.1	35623	36045
GCA_011397855.1	GCA_011397855.1_00057	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	213	221	95.02	68.57	210	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	AP022642.1	52258	52899
GCA_011397855.1	GCA_011397855.1_02513	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	260	259	99.61	41.76	261	WP_014386410.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	AP022642.1	2689656	2690438
GCA_011397855.1	GCA_011397855.1_02732	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	414	100.00	75.48	416	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	AP022642.1	2963945	2965186
GCA_011397855.1	GCA_011397855.1_02807	blaPOM-1	subclass B3 metallo-beta-lactamase POM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	286	286	100.00	100.00	286	WP_044403015.1	subclass B3 metallo-beta-lactamase POM-1	NF000438.2	POM family subclass B3 metallo-beta-lactamase	AP022642.1	3042912	3043772
GCA_015070505.1	GCA_015070505.1_01529	dfrA16	trimethoprim-resistant dihydrofolate reductase DfrA16	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	PARTIALP	83	157	52.87	98.80	83	WP_032490158.1	trimethoprim-resistant dihydrofolate reductase DfrA16	NA	NA	JADCSP010000004.1	1504	1755
GCA_015070505.1	GCA_015070505.1_01530	qacL	quaternary ammonium compound efflux SMR transporter QacL	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	110	110	100.00	100.00	110	WP_000800531.1	quaternary ammonium compound efflux SMR transporter QacL	NF000067.2	QacF/QacL family quaternary ammonium compound efflux SMR transporter	JADCSP010000004.1	1964	2296
GCA_015070505.1	GCA_015070505.1_01531	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	JADCSP010000004.1	2469	2816
GCA_015070505.1	GCA_015070505.1_01532	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JADCSP010000004.1	2810	3649
GCA_015070505.1	GCA_015070505.1_01541	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JADCSP010000004.1	9506	10948
GCA_015070505.1	GCA_015070505.1_02084	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JADCSP010000007.1	12604	14145
GCA_015070505.1	GCA_015070505.1_02086	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JADCSP010000007.1	15268	16443
GCA_009379425.1	GCA_009379425.1_01120	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCKK01000004.1	102965	103906
GCA_013276695.1	GCA_013276695.1_01523	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	99.73	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMLM01000053.1	53	1186
GCA_001807205.1	GCA_001807205.1_00848	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	KV788170.1	14297	15112
GCA_001807205.1	GCA_001807205.1_01978	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV788186.1	25026	26450
GCA_000613445.1	GCA_000613445.1_00219	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	BAIZ01000076.1	89	1054
GCA_004102925.1	GCA_004102925.1_01639	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	302	98.68	43.14	306	WP_105777201.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP035093.1	1605569	1606453
GCA_004102925.1	GCA_004102925.1_02523	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	476	561	82.17	46.57	466	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP035093.1	2535460	2536890
GCA_004102925.1	GCA_004102925.1_02532	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	146	144	88.89	48.84	129	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP035093.1	2545663	2546103
GCA_021366975.1	GCA_021366975.1_01426	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	118	131	76.34	94.00	100	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHCPK010000003.1	309911	310267
GCA_021366975.1	GCA_021366975.1_02208	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCPK010000012.1	3183	4472
GCA_021366975.1	GCA_021366975.1_02211	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHCPK010000012.1	6640	6987
GCA_024709665.1	GCA_024709665.1_03317	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	302	97.68	57.14	301	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JANJWH010000030.1	1757	2647
GCA_009496065.1	GCA_009496065.1_00547	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJI01000001.1	210728	211927
GCA_027672465.1	GCA_027672465.1_01830	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQDYH010000009.1	75057	76976
GCA_026783085.1	GCA_026783085.1_00517	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAKUXR010000001.1	514012	515229
GCA_026783085.1	GCA_026783085.1_00518	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAKUXR010000001.1	515349	516812
GCA_026783085.1	GCA_026783085.1_00767	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKUXR010000001.1	757090	757518
GCA_019391835.1	GCA_019391835.1_01456	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXRB010000004.1	114693	116618
GCA_019391835.1	GCA_019391835.1_01900	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXRB010000007.1	110534	111499
GCA_003184205.1	GCA_003184205.1_01148	tetB(58)	tetracycline efflux ABC transporter Tet(58) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	271	271	100.00	91.88	271	WP_071223302.1	tetracycline efflux ABC transporter Tet(58) subunit B	NA	NA	CP020866.1	1150294	1151109
GCA_003184205.1	GCA_003184205.1_01321	taeA	ABC-F type ribosomal protection protein TaeA	core	AMR	AMR	PLEUROMUTILIN	TIAMULIN	BLASTP	651	648	100.00	91.86	651	WP_071223118.1	ABC-F type ribosomal protection protein TaeA	NA	NA	CP020866.1	1347445	1349400
GCA_003184205.1	GCA_003184205.1_02253	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	498	494	99.60	62.60	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP020866.1	2352776	2354272
GCA_003184205.1	GCA_003184205.1_02353	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	99.25	46.47	269	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP020866.1	2459288	2460097
GCA_003184205.1	GCA_003184205.1_02429	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	211	212	99.53	76.78	211	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP020866.1	2531866	2532501
GCA_003184205.1	GCA_003184205.1_02722	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	67.59	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP020866.1	2865083	2865733
GCA_003184205.1	GCA_003184205.1_02890	aac(2)-IIb	kasugamycin N-acetyltransferase AAC(2)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	HMM	239	240	99.58	66.53	239	WP_071224044.1	kasugamycin N-acetyltransferase AAC(2)-IIb	NF033472.1	kasugamycin N-acetyltransferase AAC(2)-IIb	CP020866.1	3052884	3053603
GCA_003184205.1	GCA_003184205.1_04366	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	97.56	44.29	280	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP020866.1	4567816	4568679
GCA_003184205.1	GCA_003184205.1_05686	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	312	304	92.11	66.55	287	WP_087344360.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	CP020866.1	6054519	6055457
GCA_003184205.1	GCA_003184205.1_06086	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	123	82.11	49.50	101	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP020864.1	70860	71219
GCA_003184205.1	GCA_003184205.1_06190	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family A	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	164	169	96.45	63.80	163	AIQ64103.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	NF040503.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	CP020864.1	180039	180533
GCA_001580405.1	GCA_001580405.1_02338	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	294	98.98	64.98	297	WP_063842628.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP011022.1	2445208	2446119
GCA_001580405.1	GCA_001580405.1_03905	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	391	96.68	61.64	378	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	CP011022.1	4095806	4096981
GCA_001580405.1	GCA_001580405.1_04241	tet(V)	tetracycline efflux MFS transporter Tet(V)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	416	419	97.85	68.29	410	WP_003896589.1	tetracycline efflux MFS transporter Tet(V)	NF012178.0	tetracycline efflux MFS transporter Tet(V)	CP011022.1	4459523	4460773
GCA_000215365.2	GCA_000215365.2_00562	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	99.71	346	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	AFNM01000043.1	830	1870
GCA_020740145.1	GCA_020740145.1_01872	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAJGBB010000002.1	599869	600942
GCA_020740145.1	GCA_020740145.1_02193	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJGBB010000004.1	60461	61750
GCA_020740145.1	GCA_020740145.1_02430	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAJGBB010000007.1	22477	22962
GCA_001997265.1	GCA_001997265.1_00892	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	MTGF01000003.1	101565	102506
GCA_900636825.1	GCA_900636825.1_01321	emhC	efflux RND transporter outer membrane subunit EmhC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	486	486	100.00	94.24	486	AAQ92182.1	efflux RND transporter outer membrane subunit EmhC	NA	NA	LR134318.1	1449695	1451155
GCA_900636825.1	GCA_900636825.1_01322	emhB	efflux RND transporter permease subunit EmhB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1054	1054	100.00	92.31	1054	ACO06752.1	efflux RND transporter permease subunit EmhB	NA	NA	LR134318.1	1451152	1454316
GCA_900636825.1	GCA_900636825.1_01323	emhA	efflux RND transporter periplasmic adaptor subunit EmhA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	385	385	100.00	92.21	385	AAY90617.2	efflux RND transporter periplasmic adaptor subunit EmhA	NA	NA	LR134318.1	1454320	1455477
GCA_900636825.1	GCA_900636825.1_01351	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	138	100.00	65.94	138	WP_034169466.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	LR134318.1	1482969	1483385
GCA_900636825.1	GCA_900636825.1_02854	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	417	413	100.00	81.34	418	CAK15125.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	LR134318.1	3177605	3178858
GCA_900636825.1	GCA_900636825.1_03464	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	390	397	95.21	58.84	379	WP_064511510.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	LR134318.1	3837478	3838650
GCA_900636825.1	GCA_900636825.1_04973	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family B	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	183	186	84.95	70.89	158	AAN67541.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	NF040504.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	LR134318.1	5431375	5431926
GCA_023110385.1	GCA_023110385.1_00922	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JALDVW010000001.1	961116	961544
GCA_028527825.1	GCA_028527825.1_01093	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQPSQ010000023.1	3069	3923
GCA_028527825.1	GCA_028527825.1_01097	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAQPSQ010000024.1	2704	3879
GCA_002902325.1	GCA_002902325.1_00181	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	PPPY01000025.1	16754	17101
GCA_002902325.1	GCA_002902325.1_00185	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPPY01000025.1	20784	22076
GCA_002902325.1	GCA_002902325.1_00186	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	PPPY01000025.1	22093	22488
GCA_002902325.1	GCA_002902325.1_00420	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	PPPY01000034.1	213466	213888
GCA_002902325.1	GCA_002902325.1_00472	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	PPPY01000034.1	273098	274171
GCA_002902325.1	GCA_002902325.1_01134	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPPY01000038.1	60390	61679
GCA_001052555.1	GCA_001052555.1_00003	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JVVY01000024.1	1817	2992
GCA_001052555.1	GCA_001052555.1_00707	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JVVY01000057.1	908	1759
GCA_001052555.1	GCA_001052555.1_01291	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JVVY01000007.1	221	1075
GCA_000722705.1	GCA_000722705.1_00841	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.74	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JPFW01000007.1	312948	314147
GCA_015260405.1	GCA_015260405.1_01492	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZWS010000003.1	96144	97334
GCA_013394865.1	GCA_013394865.1_00544	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	92.68	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JABXYV010000001.1	547686	549164
GCA_003202295.1	GCA_003202295.1_00565	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	NRIN01000005.1	57	1232
GCA_003202295.1	GCA_003202295.1_00926	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NRIN01000019.1	36814	38256
GCA_003202295.1	GCA_003202295.1_01273	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	NRIN01000026.1	8181	9722
GCA_003202295.1	GCA_003202295.1_01484	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	276	279	98.92	99.64	276	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	NRIN01000027.1	6101	6931
GCA_003202295.1	GCA_003202295.1_01497	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	NRIN01000025.1	5866	7647
GCA_003202295.1	GCA_003202295.1_01532	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	555	639	86.85	99.82	555	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NA	NA	NRIN01000040.1	154	1821
GCA_003202295.1	GCA_003202295.1_01698	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	NRIN01000042.1	204	1040
GCA_003202295.1	GCA_003202295.1_01699	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	398	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NRIN01000042.1	1040	2236
GCA_003202295.1	GCA_003202295.1_01719	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NRIN01000046.1	196	1011
GCA_003202295.1	GCA_003202295.1_02223	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	NRIN01000001.1	69	923
GCA_015291885.1	GCA_015291885.1_00573	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.15	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP036186.1	614247	617096
GCA_015291885.1	GCA_015291885.1_00576	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	98.68	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	CP036186.1	620476	620934
GCA_015291885.1	GCA_015291885.1_00577	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	92.43	304	APX31172.1	heat resistance protein YfdX1	NA	NA	CP036186.1	620957	621871
GCA_015291885.1	GCA_015291885.1_00578	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	95.25	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP036186.1	621974	622861
GCA_015291885.1	GCA_015291885.1_00579	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	91.13	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CP036186.1	622958	623569
GCA_015291885.1	GCA_015291885.1_02345	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	409	414	94.44	72.96	392	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP036186.1	2516052	2517281
GCA_015291885.1	GCA_015291885.1_02953	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	260	97.31	64.71	255	WP_032488481.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP036186.1	3169391	3170173
GCA_905370375.1	GCA_905370375.1_00959	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAJPKL010000022.1	11099	12289
GCA_905370375.1	GCA_905370375.1_01601	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAJPKL010000051.1	19938	20903
GCA_905370375.1	GCA_905370375.1_01829	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAJPKL010000069.1	866	2785
GCA_905370375.1	GCA_905370375.1_02400	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CAJPKL010000141.1	2724	3524
GCA_003496665.1	GCA_003496665.1_00638	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQCF01000005.1	28175	29743
GCA_003496665.1	GCA_003496665.1_00640	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	96.67	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQCF01000005.1	30535	31398
GCA_003496665.1	GCA_003496665.1_00641	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.39	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQCF01000005.1	31415	32653
GCA_003496665.1	GCA_003496665.1_01548	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQCF01000016.1	46580	48106
GCA_003496665.1	GCA_003496665.1_01940	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQCF01000026.1	1970	2875
GCA_019703775.1	GCA_019703775.1_01534	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018782.1	1531626	1533020
GCA_900095835.1	GCA_900095835.1_00833	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	LT608321.1	982180	983145
GCA_900095835.1	GCA_900095835.1_00837	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	LT608321.1	984933	985898
GCA_900095835.1	GCA_900095835.1_00841	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.38	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	LT608321.1	987686	988651
GCA_000379965.1	GCA_000379965.1_02098	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	KB904335.1	76415	77380
GCA_000463505.1	GCA_000463505.1_01156	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP003861.1	1111650	1113569
GCA_000463505.1	GCA_000463505.1_01478	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.18	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP003861.1	1435717	1436448
GCA_023611505.1	GCA_023611505.1_01131	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	59.69	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP097843.1	1074429	1074857
GCA_023611505.1	GCA_023611505.1_02076	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP097843.1	2027790	2029709
GCA_003943785.1	GCA_003943785.1_02434	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJMZ01000011.1	21905	23122
GCA_003943785.1	GCA_003943785.1_02435	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJMZ01000011.1	23242	24705
GCA_000477975.1	GCA_000477975.1_01754	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515719.1	1860659	1861513
GCA_000327065.1	GCA_000327065.1_01611	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	260	93.85	65.16	244	WP_032488481.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP003071.1	1715147	1715929
GCA_000327065.1	GCA_000327065.1_02145	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	409	414	96.62	71.82	401	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP003071.1	2290346	2291575
GCA_015255005.1	GCA_015255005.1_00387	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	45.90	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JABZOX010000001.1	45432	45854
GCA_001697925.1	GCA_001697925.1_00237	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016675.1	222237	223616
GCA_001697925.1	GCA_001697925.1_00948	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016675.1	965248	966153
GCA_001697925.1	GCA_001697925.1_01075	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016675.1	1100491	1101729
GCA_001697925.1	GCA_001697925.1_01076	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016675.1	1102137	1102769
GCA_001697925.1	GCA_001697925.1_01078	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016675.1	1103594	1105162
GCA_001697925.1	GCA_001697925.1_01277	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016675.1	1314823	1316349
GCA_001886655.1	GCA_001886655.1_02283	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	275	94.91	59.77	261	WP_125064048.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP018101.1	2422086	2422868
GCA_001886655.1	GCA_001886655.1_04279	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	257	268	95.90	71.21	257	WP_114268491.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP018101.1	4662996	4663769
GCA_001886655.1	GCA_001886655.1_04314	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	302	99.34	54.93	304	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP018101.1	4709032	4709943
GCA_016406015.1	GCA_016406015.1_00037	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.68	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	JAEFCH010000010.1	32526	35375
GCA_016406015.1	GCA_016406015.1_00040	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	96.05	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	JAEFCH010000010.1	38755	39213
GCA_016406015.1	GCA_016406015.1_00041	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	95.39	304	APX31172.1	heat resistance protein YfdX1	NA	NA	JAEFCH010000010.1	39236	40150
GCA_016406015.1	GCA_016406015.1_00042	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	94.24	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	JAEFCH010000010.1	40253	41140
GCA_016406015.1	GCA_016406015.1_00043	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	93.60	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	JAEFCH010000010.1	41230	41841
GCA_016406015.1	GCA_016406015.1_00045	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	94.52	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	JAEFCH010000010.1	43056	43496
GCA_016406015.1	GCA_016406015.1_00046	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	571	571	100.00	88.79	571	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	JAEFCH010000010.1	43500	45215
GCA_016406015.1	GCA_016406015.1_00047	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	89.70	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	JAEFCH010000010.1	45212	45709
GCA_016406015.1	GCA_016406015.1_00808	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	133	98.50	72.73	132	WP_063851233.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	JAEFCH010000018.1	56293	56712
GCA_016406015.1	GCA_016406015.1_03934	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	53.26	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JAEFCH010000009.1	38964	39239
GCA_016406015.1	GCA_016406015.1_04015	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	302	97.68	72.82	298	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAEFCH010000009.1	121636	122553
GCA_001553225.1	GCA_001553225.1_00216	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	KQ960478.1	12042	13007
GCA_001553225.1	GCA_001553225.1_01342	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.60	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	KQ960531.1	5202	7127
GCA_003351425.1	GCA_003351425.1_01340	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.63	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031250.1	1355732	1357126
GCA_900618555.1	GCA_900618555.1_00946	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	LR129841.1	908291	909490
GCA_024104435.1	GCA_024104435.1_00716	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHAVF010000001.1	184760	185179
GCA_024104435.1	GCA_024104435.1_01268	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHAVF010000020.1	3172	5178
GCA_024104435.1	GCA_024104435.1_01359	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	97.62	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHAVF010000023.1	9195	9575
GCA_024104435.1	GCA_024104435.1_01360	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.57	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHAVF010000023.1	9565	11322
GCA_024104435.1	GCA_024104435.1_01361	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHAVF010000023.1	11429	12274
GCA_024104435.1	GCA_024104435.1_01385	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAHAVF010000028.1	2066	2389
GCA_024104435.1	GCA_024104435.1_01738	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAHAVF010000030.1	80	1519
GCA_024104435.1	GCA_024104435.1_01753	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHAVF010000003.1	4354	5646
GCA_024104435.1	GCA_024104435.1_01904	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHAVF010000004.1	985	2058
GCA_013127315.1	GCA_013127315.1_02202	helR	RNA polymerase recycling motor ATPase HelR	plus	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	786	722	97.51	63.65	751	CCA59315.1	RNA polymerase recycling motor ATPase HelR	NF041254.1	RNA polymerase recycling motor ATPase HelR	CP053419.1	2400641	2403001
GCA_013127315.1	GCA_013127315.1_03010	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	133	150	84.00	50.39	129	WP_063857695.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP053419.1	3341732	3342133
GCA_900654195.1	GCA_900654195.1_01958	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_002244796.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CAACAF010000018.1	42526	43731
GCA_025558725.1	GCA_025558725.1_00108	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094733.1	119128	120417
GCA_025558725.1	GCA_025558725.1_00111	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP094733.1	122594	122941
GCA_025558725.1	GCA_025558725.1_00186	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP094733.1	207295	207723
GCA_025558725.1	GCA_025558725.1_00914	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP094733.1	950128	950973
GCA_025558725.1	GCA_025558725.1_00915	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP094733.1	951080	952837
GCA_025558725.1	GCA_025558725.1_00916	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP094733.1	952827	953207
GCA_003515045.1	GCA_003515045.1_01132	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP032056.1	1358676	1359872
GCA_003515045.1	GCA_003515045.1_02258	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP032057.1	874613	875578
GCA_018127965.1	GCA_018127965.1_01613	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072349.1	1856279	1857469
GCA_001809885.1	GCA_001809885.1_01676	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV799281.1	53060	54481
GCA_030181055.1	GCA_030181055.1_02294	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JARWMT010000002.1	6359	7174
GCA_030181055.1	GCA_030181055.1_02295	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JARWMT010000002.1	7235	8038
GCA_030181055.1	GCA_030181055.1_02296	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JARWMT010000002.1	8038	8874
GCA_030181055.1	GCA_030181055.1_02297	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JARWMT010000002.1	9376	10236
GCA_000332735.1	GCA_000332735.1_00438	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP003668.1	475312	476604
GCA_000332735.1	GCA_000332735.1_02501	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP003670.1	9091	9999
GCA_000332735.1	GCA_000332735.1_02502	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP003670.1	9996	10538
GCA_000332735.1	GCA_000332735.1_02503	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP003670.1	10631	11425
GCA_000332735.1	GCA_000332735.1_02524	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP003673.1	417	1262
GCA_000332735.1	GCA_000332735.1_02525	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP003673.1	1369	3126
GCA_000332735.1	GCA_000332735.1_02526	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP003673.1	3116	3496
GCA_000332735.1	GCA_000332735.1_02573	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	99.07	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	CP003675.1	4231	4554
GCA_902363295.1	GCA_902363295.1_00522	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CABIZS010000001.1	493112	494575
GCA_902363295.1	GCA_902363295.1_00523	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CABIZS010000001.1	494695	495912
GCA_902363295.1	GCA_902363295.1_00684	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	61.36	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CABIZS010000001.1	655414	655842
GCA_902363295.1	GCA_902363295.1_00915	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.49	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CABIZS010000001.1	906177	907913
GCA_902363295.1	GCA_902363295.1_00916	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.74	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CABIZS010000001.1	907915	909639
GCA_902363295.1	GCA_902363295.1_01838	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABIZS010000003.1	71174	73093
GCA_023716965.1	GCA_023716965.1_01083	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAMQRY010000026.1	170	1024
GCA_001885845.1	GCA_001885845.1_01193	vanS-C	vancomycin resistance histidine kinase VanS-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	376	376	100.00	99.73	376	WP_034869172.1	vancomycin resistance histidine kinase VanS-C	NF033091.0	vancomycin resistance histidine kinase VanS	JXKK01000018.1	56207	57337
GCA_001885845.1	GCA_001885845.1_01194	vanR-C	vancomycin resistance response regulator transcription factor VanR-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	231	231	100.00	100.00	231	WP_005228837.1	vancomycin resistance response regulator transcription factor VanR-C	NF000403.1	vancomycin resistance response regulator transcription factor VanR-C	JXKK01000018.1	57327	58022
GCA_001885845.1	GCA_001885845.1_01195	vanTc	membrane-bound serine racemase VanT	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	700	706	100.00	98.73	706	WP_063856758.1	membrane-bound serine racemase VanT	NF033132.1	membrane-bound serine racemase VanT	JXKK01000018.1	58121	60223
GCA_001885845.1	GCA_001885845.1_01196	vanXY-C	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	190	190	100.00	100.00	190	WP_060792852.1	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	NF000380.1	D,D-carboxypeptidase/D,D-dipeptidase VanXY	JXKK01000018.1	60220	60792
GCA_001885845.1	GCA_001885845.1_01197	vanC	D-alanine--D-serine ligase VanC2/3	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	350	350	100.00	100.00	350	WP_060792851.1	D-alanine--D-serine ligase VanC2/3	NF012214.1	D-alanine--D-serine ligase VanC	JXKK01000018.1	60789	61841
GCA_001885845.1	GCA_001885845.1_01232	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	133	95.49	58.59	128	WP_010989789.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	JXKK01000019.1	33723	34133
GCA_025272975.1	GCA_025272975.1_00072	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP103049.1	82949	83371
GCA_025272975.1	GCA_025272975.1_00123	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP103049.1	142569	143642
GCA_025272975.1	GCA_025272975.1_00906	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP103049.1	888504	889793
GCA_025272975.1	GCA_025272975.1_02136	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP103049.1	2108540	2108935
GCA_025272975.1	GCA_025272975.1_02137	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP103049.1	2108952	2110244
GCA_025272975.1	GCA_025272975.1_02141	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP103049.1	2113927	2114274
GCA_025272975.1	GCA_025272975.1_02524	blaTEM	TEM family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	286	286	100.00	99.65	286	WP_000027050.1	broad-spectrum class A beta-lactamase TEM-116	NF000531.2	TEM family class A beta-lactamase	CP103051.1	157	1017
GCA_009931395.1	GCA_009931395.1_00535	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP038807.1	560761	561141
GCA_009931395.1	GCA_009931395.1_00536	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP038807.1	561131	562888
GCA_009931395.1	GCA_009931395.1_00537	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP038807.1	562995	563840
GCA_009931395.1	GCA_009931395.1_00684	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP038807.1	710561	711853
GCA_009931395.1	GCA_009931395.1_00820	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP038807.1	854426	855499
GCA_009931395.1	GCA_009931395.1_01338	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP038807.1	1383303	1383722
GCA_900115025.1	GCA_900115025.1_01716	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.85	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	FOVA01000035.1	2738	4216
GCA_022569195.1	GCA_022569195.1_00288	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKRKS010000001.1	271501	272346
GCA_022569195.1	GCA_022569195.1_00289	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKRKS010000001.1	272453	274210
GCA_022569195.1	GCA_022569195.1_00290	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKRKS010000001.1	274200	274580
GCA_022569195.1	GCA_022569195.1_00382	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKS010000001.1	361660	362079
GCA_022569195.1	GCA_022569195.1_01431	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKS010000002.1	89765	90838
GCA_022569195.1	GCA_022569195.1_01441	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	137	131	90.84	92.44	119	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKRKS010000002.1	98476	98889
GCA_022569195.1	GCA_022569195.1_01587	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKS010000002.1	255267	256559
GCA_022569195.1	GCA_022569195.1_02487	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	PARTIALP	140	213	64.79	100.00	138	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NA	NA	JAKRKS010000005.1	65221	65643
GCA_023713025.1	GCA_023713025.1_01329	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAMAWZ010000004.1	209540	211180
GCA_009496335.1	GCA_009496335.1_00439	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIKD01000001.1	37660	38859
GCA_900102155.1	GCA_900102155.1_01471	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	153	147	97.28	48.61	144	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	FNAY01000006.1	132427	132888
GCA_028326585.1	GCA_028326585.1_00049	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMNC010000010.1	49644	51563
GCA_028326585.1	GCA_028326585.1_01825	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMNC010000008.1	70517	71248
GCA_010748955.1	GCA_010748955.1_00137	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	99.80	87.17	491	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP048798.1	127325	128803
GCA_902850275.2	GCA_902850275.2_00690	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	OU540593.1	678704	679921
GCA_902850275.2	GCA_902850275.2_00691	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	OU540593.1	680041	681504
GCA_003596365.3	GCA_003596365.3_00043	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP045187.2	42856	43599
GCA_003596365.3	GCA_003596365.3_00061	lsa(B)	ABC-F type ribosomal protection protein Lsa(B)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_011133547.1	ABC-F type ribosomal protection protein Lsa(B)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP045187.2	57241	58719
GCA_003596365.3	GCA_003596365.3_00062	cfr	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	core	AMR	AMR	LINCOSAMIDE/OXAZOLIDINONE/PHENICOL/PLEUROMUTILIN/STREPTOGRAMIN	CHLORAMPHENICOL/CLINDAMYCIN/FLORFENICOL/LINEZOLID/STREPTOGRAMIN B/TIAMULIN/VIRGINIAMYCIN	BLASTP	349	349	100.00	99.71	349	WP_001010505.1	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	CP045187.2	59365	60414
GCA_003596365.3	GCA_003596365.3_00072	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	PARTIALP	636	1024	62.11	99.84	636	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NA	NA	CP045187.2	67670	69580
GCA_003596365.3	GCA_003596365.3_00122	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP045187.2	114392	115681
GCA_003596365.3	GCA_003596365.3_00125	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP045187.2	116978	118984
GCA_003596365.3	GCA_003596365.3_00146	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP045187.2	134741	135142
GCA_003596365.3	GCA_003596365.3_00147	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP045187.2	135160	136452
GCA_003596365.3	GCA_003596365.3_00231	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP045187.2	211490	212782
GCA_003596365.3	GCA_003596365.3_01784	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP045187.2	1674585	1675082
GCA_003596365.3	GCA_003596365.3_01852	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP045187.2	1727543	1728982
GCA_003596365.3	GCA_003596365.3_02270	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP045187.2	2123571	2124212
GCA_003596365.3	GCA_003596365.3_02829	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP045187.2	2630486	2631331
GCA_003596365.3	GCA_003596365.3_02830	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP045187.2	2631438	2633195
GCA_003596365.3	GCA_003596365.3_02831	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP045187.2	2633185	2633565
GCA_003596365.3	GCA_003596365.3_02839	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP045187.2	2641119	2641913
GCA_003596365.3	GCA_003596365.3_02840	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP045187.2	2642006	2642548
GCA_003596365.3	GCA_003596365.3_02841	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	199	302	65.89	99.50	199	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	NA	CP045187.2	2642545	2643144
GCA_018336855.1	GCA_018336855.1_00058	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	407	392	100.00	75.77	392	WP_430673475.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP059558.1	62781	64004
GCA_018336855.1	GCA_018336855.1_00965	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	98.74	78.83	392	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP059558.1	1002054	1003247
GCA_018336855.1	GCA_018336855.1_03230	blaNDM-1	subclass B1 metallo-beta-lactamase NDM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	270	270	100.00	100.00	270	WP_004201164.1	subclass B1 metallo-beta-lactamase NDM-1	NF000259.2	NDM family subclass B1 metallo-beta-lactamase	CP059559.1	36031	36843
GCA_018336855.1	GCA_018336855.1_03232	aph(3)-VI	APH(3)-VI family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	259	259	100.00	100.00	259	WP_014386410.1	APH(3)-VI family aminoglycoside O-phosphotransferase	NF033062.0	APH(3)-VI family aminoglycoside O-phosphotransferase	CP059559.1	38121	38900
GCA_024539835.1	GCA_024539835.1_01354	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.55	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFJMD010000003.1	69636	71057
GCA_024539835.1	GCA_024539835.1_02163	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	98.99	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JAFJMD010000062.1	112	1893
GCA_024539835.1	GCA_024539835.1_02167	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JAFJMD010000063.1	104	550
GCA_024539835.1	GCA_024539835.1_02280	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JAFJMD010000072.1	1298	2101
GCA_024539835.1	GCA_024539835.1_02281	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAFJMD010000072.1	2101	2937
GCA_024539835.1	GCA_024539835.1_02283	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAFJMD010000072.1	3237	4412
GCA_024539835.1	GCA_024539835.1_02294	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAFJMD010000075.1	823	1677
GCA_024539835.1	GCA_024539835.1_02363	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAFJMD010000078.1	238	1053
GCA_024655665.1	GCA_024655665.1_00973	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANLGE010000015.1	327517	327945
GCA_024655665.1	GCA_024655665.1_01144	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANLGE010000015.1	482307	483524
GCA_024655665.1	GCA_024655665.1_01145	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANLGE010000015.1	483644	485107
GCA_024655665.1	GCA_024655665.1_01903	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.74	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANLGE010000021.1	329729	331453
GCA_024655665.1	GCA_024655665.1_01904	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANLGE010000021.1	331455	333191
GCA_000561065.1	GCA_000561065.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	KK024778.1	39127	41133
GCA_000561065.1	GCA_000561065.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	KK024778.1	41233	42219
GCA_000561065.1	GCA_000561065.1_00143	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	KK024778.1	157682	159040
GCA_000561065.1	GCA_000561065.1_00346	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	KK024778.1	387350	388705
GCA_000561065.1	GCA_000561065.1_00384	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	KK024778.1	421934	422545
GCA_000561065.1	GCA_000561065.1_00864	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.11	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	KK024778.1	897135	897863
GCA_000561065.1	GCA_000561065.1_00865	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.52	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	KK024778.1	897887	898615
GCA_000561065.1	GCA_000561065.1_01485	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	KK024778.1	1559906	1560883
GCA_000561065.1	GCA_000561065.1_01486	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	KK024778.1	1560885	1561823
GCA_000561065.1	GCA_000561065.1_01661	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	KK024778.1	1708546	1709298
GCA_000561065.1	GCA_000561065.1_01832	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KK024778.1	1901630	1902922
GCA_000561065.1	GCA_000561065.1_01875	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	KK024778.1	1940164	1940880
GCA_000561065.1	GCA_000561065.1_01878	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	KK024778.1	1942655	1943377
GCA_000561065.1	GCA_000561065.1_01879	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	KK024778.1	1943502	1944209
GCA_000561065.1	GCA_000561065.1_01889	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	KK024778.1	1955858	1956841
GCA_000561065.1	GCA_000561065.1_01890	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	KK024778.1	1956843	1957778
GCA_000561065.1	GCA_000561065.1_02049	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	KK024778.1	2086289	2086639
GCA_000561065.1	GCA_000561065.1_02054	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	KK024778.1	2088853	2089344
GCA_000561065.1	GCA_000561065.1_02130	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	KK024778.1	2146999	2147133
GCA_000561065.1	GCA_000561065.1_02279	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.58	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	KK024778.1	2299178	2300620
GCA_000561065.1	GCA_000561065.1_02454	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	KK024778.1	2452367	2452786
GCA_000561065.1	GCA_000561065.1_02541	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	KK024778.1	2542444	2543409
GCA_000561065.1	GCA_000561065.1_02542	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	KK024778.1	2543976	2544923
GCA_000561065.1	GCA_000561065.1_02543	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	KK024778.1	2544925	2545902
GCA_000561065.1	GCA_000561065.1_02765	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	KK024778.1	2784463	2785992
GCA_000561065.1	GCA_000561065.1_02799	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KK024778.1	2829325	2830377
GCA_000463055.1	GCA_000463055.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP003979.1	40206	40610
GCA_000463055.1	GCA_000463055.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP003979.1	40827	41570
GCA_000463055.1	GCA_000463055.1_00040	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP003979.1	42872	44878
GCA_000463055.1	GCA_000463055.1_00041	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP003979.1	44978	45964
GCA_000463055.1	GCA_000463055.1_00111	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	450	450	100.00	100.00	450	WP_001100294.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP003979.1	119020	120372
GCA_000463055.1	GCA_000463055.1_00319	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP003979.1	352525	353880
GCA_000463055.1	GCA_000463055.1_01698	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP003979.1	1789747	1791039
GCA_000463055.1	GCA_000463055.1_01742	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA	CP003979.1	1824298	1825020
GCA_000463055.1	GCA_000463055.1_01743	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.87	235	ABD31004.1	serine protease SplA	NA	NA	CP003979.1	1825145	1825852
GCA_000463055.1	GCA_000463055.1_01748	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP003979.1	1829982	1830965
GCA_000463055.1	GCA_000463055.1_01749	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP003979.1	1830967	1831902
GCA_000463055.1	GCA_000463055.1_01757	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	99.60	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP003979.1	1838104	1838859
GCA_000463055.1	GCA_000463055.1_01758	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	256	261	100.00	94.25	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP003979.1	1838898	1839668
GCA_000463055.1	GCA_000463055.1_01759	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP003979.1	1839822	1840550
GCA_000463055.1	GCA_000463055.1_01760	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP003979.1	1840585	1841304
GCA_000463055.1	GCA_000463055.1_01761	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	99.61	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP003979.1	1841585	1842349
GCA_000463055.1	GCA_000463055.1_01895	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP003979.1	1950949	1951329
GCA_000463055.1	GCA_000463055.1_01896	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP003979.1	1951319	1953076
GCA_000463055.1	GCA_000463055.1_01897	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP003979.1	1953183	1954028
GCA_000463055.1	GCA_000463055.1_01923	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	82	116	70.69	98.78	82	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP003979.1	1976719	1976967
GCA_000463055.1	GCA_000463055.1_01929	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.16	163	CAA24957.1	staphylokinase	NA	NA	CP003979.1	1979272	1979763
GCA_000463055.1	GCA_000463055.1_02002	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP003979.1	2033711	2033845
GCA_000463055.1	GCA_000463055.1_02149	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP003979.1	2185194	2186636
GCA_000463055.1	GCA_000463055.1_02319	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP003979.1	2333575	2333994
GCA_000463055.1	GCA_000463055.1_02403	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP003979.1	2422111	2423076
GCA_000463055.1	GCA_000463055.1_02404	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP003979.1	2423643	2424590
GCA_000463055.1	GCA_000463055.1_02405	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP003979.1	2424592	2425569
GCA_000463055.1	GCA_000463055.1_02630	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP003979.1	2665467	2666996
GCA_000463055.1	GCA_000463055.1_02665	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP003979.1	2710366	2711418
GCA_000463055.1	GCA_000463055.1_02709	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP003980.1	874	1491
GCA_000463055.1	GCA_000463055.1_02712	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP003981.1	84	818
GCA_001810085.1	GCA_001810085.1_00052	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV799805.1	1098	2540
GCA_001591205.1	GCA_001591205.1_00113	blaL1	L1 family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	307	290	100.00	99.66	290	WP_032966056.1	L1 family subclass B3 metallo-beta-lactamase	NF033106.1	L1 family subclass B3 metallo-beta-lactamase	BCUI01000003.1	7659	8582
GCA_001591205.1	GCA_001591205.1_00294	copA	laccase-like oxidase CopA	plus	STRESS	METAL	COPPER	COPPER	PARTIALP	556	623	89.25	99.28	556	ADR70747.1	laccase-like oxidase CopA	NA	NA	BCUI01000004.1	1350	3020
GCA_001591205.1	GCA_001591205.1_00295	copB	copper-binding protein CopB	plus	STRESS	METAL	COPPER	COPPER	EXACTP	422	422	100.00	100.00	422	ADR70748.1	copper-binding protein CopB	NA	NA	BCUI01000004.1	3017	4285
GCA_001591205.1	GCA_001591205.1_00367	aph(6)	APH(6) family putative aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	270	270	99.63	98.88	269	WP_012480135.1	APH(6) family putative aminoglycoside O-phosphotransferase	NF012160.0	APH(6) family putative aminoglycoside O-phosphotransferase	BCUI01000004.1	77285	78097
GCA_001591205.1	GCA_001591205.1_01665	aph(3)-IIc	aminoglycoside O-phosphotransferase APH(3)-IIc	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	314	267	93.63	99.60	250	WP_012479999.1	aminoglycoside O-phosphotransferase APH(3)-IIc	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	BCUI01000023.1	82803	83747
GCA_001591205.1	GCA_001591205.1_02089	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	50.00	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	BCUI01000027.1	62746	63021
GCA_001591205.1	GCA_001591205.1_02195	smeF	multidrug efflux RND transporter outer membrane subunit SmeF	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	461	466	98.71	98.26	460	CAC14596.1	multidrug efflux RND transporter outer membrane subunit SmeF	NA	NA	BCUI01000028.1	6465	7850
GCA_001591205.1	GCA_001591205.1_02484	aac(6)-Iz	aminoglycoside N-acetyltransferase AAC(6)-Iz	core	AMR	AMR	AMINOGLYCOSIDE	TOBRAMYCIN	EXACTP	153	153	100.00	100.00	153	WP_024956926.1	aminoglycoside N-acetyltransferase AAC(6)-Iz	NF000138.1	aminoglycoside N-acetyltransferase AAC(6)-Iz	BCUI01000030.1	17911	18372
GCA_001591205.1	GCA_001591205.1_02592	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	144	150	85.33	56.25	128	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	BCUI01000032.1	939	1373
GCA_001591205.1	GCA_001591205.1_02722	emrB	multidrug efflux MFS transporter permease subunit EmrB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	528	528	100.00	99.81	528	CAQ45064.1	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	BCUI01000034.1	7113	8699
GCA_001591205.1	GCA_001591205.1_02723	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	393	393	100.00	100.00	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	BCUI01000034.1	8707	9888
GCA_001591205.1	GCA_001591205.1_02724	emrC	multidrug efflux transporter outer membrane subunit EmrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	497	497	100.00	98.39	497	CAQ45062.1	multidrug efflux transporter outer membrane subunit EmrC	NA	NA	BCUI01000034.1	9900	11393
GCA_001591205.1	GCA_001591205.1_03892	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	304	100.00	70.72	304	WP_063842700.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	BCUI01000063.1	10653	11564
GCA_002763975.1	GCA_002763975.1_00938	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	208	212	96.70	60.49	205	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP024734.1	993769	994395
GCA_002763975.1	GCA_002763975.1_01067	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP024734.1	1139270	1141195
GCA_002763975.1	GCA_002763975.1_01072	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP024734.1	1145341	1146306
GCA_000444425.1	GCA_000444425.1_00797	catA	type A-4 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	217	217	100.00	96.77	217	WP_063843208.1	type A-4 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP004022.1	911082	911735
GCA_000444425.1	GCA_000444425.1_02527	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	92.19	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP004022.1	2742246	2742824
GCA_000444425.1	GCA_000444425.1_02531	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	194	194	100.00	99.48	194	AAD47284.1	tellurium resistance-associated protein TerZ	NA	NA	CP004022.1	2745581	2746165
GCA_000444425.1	GCA_000444425.1_02542	tet(J)	tetracycline efflux MFS transporter Tet(J)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	398	398	100.00	99.50	398	WP_004245621.1	tetracycline efflux MFS transporter Tet(J)	NF012194.0	tetracycline efflux MFS transporter Tet(J)	CP004022.1	2755409	2756605
GCA_000316075.2	GCA_000316075.2_01882	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KB373323.1	136651	137943
GCA_000316075.2	GCA_000316075.2_02032	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KB373323.1	297540	298613
GCA_000316075.2	GCA_000316075.2_02226	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	KB373324.1	46573	46992
GCA_000232645.2	GCA_000232645.2_00298	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	AGPD01000005.1	931	1971
GCA_000232645.2	GCA_000232645.2_00304	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	PARTIALP	261	487	52.16	99.61	254	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NA	NA	AGPD01000005.1	4373	5158
GCA_000232645.2	GCA_000232645.2_00305	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AGPD01000005.1	5278	6495
GCA_000232645.2	GCA_000232645.2_00437	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	AGPD01000004.1	54260	54997
GCA_000232645.2	GCA_000232645.2_02196	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AGPD01000001.1	890900	892690
GCA_029024105.1	GCA_029024105.1_00014	blaOXA-283	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	276	276	100.00	100.00	276	WP_004647119.1	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	NF000436.2	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	CP118963.1	16554	17384
GCA_029024105.1	GCA_029024105.1_00916	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	97.23	76.68	386	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP118963.1	952428	953648
GCA_029024105.1	GCA_029024105.1_03265	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.57	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP118964.1	158065	160914
GCA_029024105.1	GCA_029024105.1_03266	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	94.92	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP118964.1	161124	162011
GCA_029024105.1	GCA_029024105.1_03267	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	95.07	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CP118964.1	162108	162719
GCA_029024105.1	GCA_029024105.1_03342	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP118965.1	9573	9809
GCA_029024105.1	GCA_029024105.1_03343	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP118965.1	9806	10171
GCA_029024105.1	GCA_029024105.1_03344	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	97.50	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP118965.1	10189	11874
GCA_029024105.1	GCA_029024105.1_03345	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP118965.1	11913	12338
GCA_029024105.1	GCA_029024105.1_03346	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	84.62	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP118965.1	12366	12641
GCA_029024105.1	GCA_029024105.1_03347	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	94.83	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP118965.1	12655	13005
GCA_029024105.1	GCA_029024105.1_03348	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.25	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP118965.1	13077	13532
GCA_905071845.1	GCA_905071845.1_00077	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAJHJN010000001.1	66830	68293
GCA_905071845.1	GCA_905071845.1_00078	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAJHJN010000001.1	68413	69630
GCA_900176385.1	GCA_900176385.1_01083	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	308	310	97.42	46.08	306	WP_063857821.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	FWXN01000002.1	128126	129052
GCA_019929405.1	GCA_019929405.1_00593	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZPL010000001.1	598398	598826
GCA_000302495.1	GCA_000302495.1_01488	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	AMSO01000008.1	119389	120330
GCA_013343135.1	GCA_013343135.1_00025	catB	type B chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	210	98.10	81.55	206	WP_063843223.1	type B chloramphenicol O-acetyltransferase	NF000490.1	type B chloramphenicol O-acetyltransferase	CP054571.1	23447	24097
GCA_013343135.1	GCA_013343135.1_00889	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP054571.1	996145	996960
GCA_013343135.1	GCA_013343135.1_01038	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	261	266	97.74	42.15	261	WP_004861468.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	CP054571.1	1139273	1140058
GCA_013343135.1	GCA_013343135.1_01518	blaELC	ELC family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	HMM	430	450	100.00	87.78	450	WP_232734851.1	ELC family class C beta-lactamase	NF050047.1	ELC family class C beta-lactamase	CP054571.1	1654046	1655338
GCA_013343135.1	GCA_013343135.1_01620	blaOXA-114f	class D beta-lactamase OXA-114f	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	275	275	100.00	100.00	275	WP_024069684.1	class D beta-lactamase OXA-114f	NF033818.0	OXA-114 family class D beta-lactamase	CP054571.1	1785591	1786418
GCA_013343135.1	GCA_013343135.1_03207	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	120	99.17	59.66	119	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP054571.1	3507012	3507371
GCA_013343135.1	GCA_013343135.1_03229	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP054571.1	3530363	3530797
GCA_013343135.1	GCA_013343135.1_03230	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP054571.1	3530869	3531219
GCA_013343135.1	GCA_013343135.1_03231	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP054571.1	3531232	3531507
GCA_013343135.1	GCA_013343135.1_03232	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP054571.1	3531579	3533264
GCA_013343135.1	GCA_013343135.1_03233	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP054571.1	3533282	3533647
GCA_013343135.1	GCA_013343135.1_03234	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP054571.1	3533644	3533880
GCA_013343135.1	GCA_013343135.1_04757	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP054571.1	5167736	5168023
GCA_013343135.1	GCA_013343135.1_04758	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP054571.1	5168034	5169722
GCA_013343135.1	GCA_013343135.1_05967	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	398	399	96.49	61.04	385	WP_000804064.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP054571.1	6516554	6517750
GCA_024295665.1	GCA_024295665.1_01137	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOU010000004.1	73319	74782
GCA_024295665.1	GCA_024295665.1_01138	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOU010000004.1	74902	76119
GCA_021294795.1	GCA_021294795.1_01499	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	347	399	86.97	98.27	347	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JAJSBG010000045.1	86	1129
GCA_901873425.1	GCA_901873425.1_00733	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABFLJ010000021.1	74468	76108
GCA_901873425.1	GCA_901873425.1_00895	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CABFLJ010000021.1	212877	213305
GCA_901873425.1	GCA_901873425.1_00903	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CABFLJ010000021.1	219403	220866
GCA_901873425.1	GCA_901873425.1_00904	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CABFLJ010000021.1	220986	222203
GCA_901873425.1	GCA_901873425.1_01518	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	579	579	100.00	100.00	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	CABFLJ010000025.1	75769	77508
GCA_901873425.1	GCA_901873425.1_01519	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	93.09	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	CABFLJ010000025.1	77505	79244
GCA_019132025.1	GCA_019132025.1_00464	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHONC010000011.1	63011	63976
GCA_019132025.1	GCA_019132025.1_01056	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	322	300	96.00	50.69	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAHONC010000003.1	71349	72317
GCA_003546885.1	GCA_003546885.1_00087	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	144	141	99.29	85.71	140	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP031756.1	93871	94305
GCA_003546885.1	GCA_003546885.1_00990	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.22	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP031756.1	991955	993070
GCA_003546885.1	GCA_003546885.1_00991	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1222	1219	100.00	84.30	1223	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP031756.1	993117	996785
GCA_003546885.1	GCA_003546885.1_00994	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	724	724	100.00	100.00	724	CCG33322.1	siderophore salmochelin receptor IroN	NA	NA	CP031756.1	999198	1001372
GCA_003546885.1	GCA_003546885.1_01693	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	96.45	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP031756.1	1708310	1709494
GCA_003546885.1	GCA_003546885.1_01915	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	298	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP031756.1	1932575	1933471
GCA_003546885.1	GCA_003546885.1_02381	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	94.96	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP031756.1	2415445	2415864
GCA_003546885.1	GCA_003546885.1_02780	ampC-Kaer	AmpC-Kaer family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	386	381	100.00	100.00	381	WP_063406924.1	extended-spectrum class C beta-lactamase AmpC-Kaer-1	NF041662.1	AmpC-Kaer family extended-spectrum class C beta-lactamase	CP031756.1	2853153	2854313
GCA_003546885.1	GCA_003546885.1_03381	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	97.80	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP031756.1	3449066	3450298
GCA_003546885.1	GCA_003546885.1_03784	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	97.43	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP031756.1	3871815	3874967
GCA_003546885.1	GCA_003546885.1_05138	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.33	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP031756.1	5217261	5219063
GCA_003546885.1	GCA_003546885.1_05139	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.50	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP031756.1	5219050	5220852
GCA_003546885.1	GCA_003546885.1_05173	clbN	colibactin non-ribosomal peptide synthetase ClbN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1455	1455	100.00	100.00	1455	AMH08480.1	colibactin non-ribosomal peptide synthetase ClbN	NA	NA	CP031756.1	5269117	5273484
GCA_003546885.1	GCA_003546885.1_05185	clbB	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	3206	3206	100.00	100.00	3206	AMQ58400.1	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	NA	NA	CP031756.1	5303580	5313200
GCA_002215535.1	GCA_002215535.1_01432	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP022247.1	1414727	1415368
GCA_002215535.1	GCA_002215535.1_01699	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.67	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP022247.1	1671908	1673200
GCA_002215535.1	GCA_002215535.1_02005	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP022247.1	1979750	1981039
GCA_002215535.1	GCA_002215535.1_02008	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP022247.1	1983217	1983564
GCA_002215535.1	GCA_002215535.1_02093	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	95.07	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP022247.1	2083064	2083492
GCA_002215535.1	GCA_002215535.1_02515	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP022250.1	2674	4218
GCA_002215535.1	GCA_002215535.1_02516	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP022250.1	4402	4962
GCA_002215535.1	GCA_002215535.1_02519	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP022250.1	6748	7128
GCA_002215535.1	GCA_002215535.1_02520	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP022250.1	7118	8875
GCA_002215535.1	GCA_002215535.1_02521	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP022250.1	8982	9827
GCA_002215535.1	GCA_002215535.1_02539	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	522	522	100.00	100.00	522	WP_032492560.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP022251.1	640	2208
GCA_002215535.1	GCA_002215535.1_02548	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	CP022252.1	1534	1857
GCA_026684175.1	GCA_026684175.1_00696	inhA2	M6 family metalloprotease immune inhibitor InhA2	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	799	799	100.00	99.50	799	AAP24685.1	M6 family metalloprotease immune inhibitor InhA2	NA	NA	CP113428.1	672083	674482
GCA_026684175.1	GCA_026684175.1_00701	cerA	phospholipase CerA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	283	100.00	99.29	283	AAS39677.1	phospholipase CerA	NA	NA	CP113428.1	678346	679197
GCA_026684175.1	GCA_026684175.1_00702	sph	sphingomyelinase C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	333	338	98.52	99.70	333	AAP24691.1	sphingomyelinase C	NA	NA	CP113428.1	679271	680272
GCA_026684175.1	GCA_026684175.1_01132	cytK2	beta-channel forming cytolysin CytK2	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	336	336	100.00	97.02	336	AAP08097.1	beta-channel forming cytolysin CytK2	NA	NA	CP113428.1	1088598	1089608
GCA_026684175.1	GCA_026684175.1_01304	inhA1	M6 family metalloprotease immune inhibitor InhA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	795	796	100.00	96.73	796	ADH05944.1	M6 family metalloprotease immune inhibitor InhA1	NA	NA	CP113428.1	1248707	1251094
GCA_026684175.1	GCA_026684175.1_01599	mphL	macrolide 2-phosphotransferase MphL	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	298	303	98.35	86.91	298	WP_002047670.1	macrolide 2-phosphotransferase MphL	NF038057.1	macrolide 2-phosphotransferase MphL	CP113428.1	1505883	1506779
GCA_026684175.1	GCA_026684175.1_01871	nheA	non-hemolytic enterotoxin NHE subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	386	386	100.00	96.89	386	AAS40892.1	non-hemolytic enterotoxin NHE subunit A	NA	NA	CP113428.1	1774183	1775343
GCA_026684175.1	GCA_026684175.1_01872	nheB	non-hemolytic enterotoxin NHE subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	402	402	100.00	98.76	402	AAS40893.1	non-hemolytic enterotoxin NHE subunit B	NA	NA	CP113428.1	1775375	1776583
GCA_026684175.1	GCA_026684175.1_01873	nheC	non-hemolytic enterotoxin NHE subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	359	359	100.00	94.71	359	AAS40894.1	non-hemolytic enterotoxin NHE subunit C	NA	NA	CP113428.1	1776691	1777770
GCA_026684175.1	GCA_026684175.1_01937	entFM	enterotoxin EntFM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	420	421	100.00	98.34	421	AFH83235.1	enterotoxin EntFM	NF040678.1	enterotoxin EntFM	CP113428.1	1852601	1853863
GCA_026684175.1	GCA_026684175.1_02013	fosB	FosBx1 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	138	138	100.00	90.58	138	WP_000943763.1	fosfomycin resistance bacillithiol transferase FosBx1	NF041541.1	FosBx1 family fosfomycin resistance bacillithiol transferase	CP113428.1	1923841	1924257
GCA_026684175.1	GCA_026684175.1_02149	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family A	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	164	164	100.00	95.12	164	KYZ65872.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	NF040503.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	CP113428.1	2049284	2049778
GCA_026684175.1	GCA_026684175.1_02153	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	121	83.47	49.50	101	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP113428.1	2052428	2052787
GCA_026684175.1	GCA_026684175.1_02365	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	219	98.63	57.41	216	WP_063843220.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP113428.1	2267073	2267723
GCA_026684175.1	GCA_026684175.1_02463	bla	class A beta-lactamase Bla1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	306	309	99.03	96.08	306	WP_011053164.1	class A beta-lactamase Bla1	NF033096.1	class A beta-lactamase Bla1	CP113428.1	2353782	2354702
GCA_026684175.1	GCA_026684175.1_02483	hlyII	hemolysin II HlyII	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	412	412	100.00	96.36	412	AAP10457.1	hemolysin II HlyII	NA	NA	CP113428.1	2376903	2378141
GCA_026684175.1	GCA_026684175.1_02484	hlyIIR	hemolysin II regulator HlyIIR	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	201	201	100.00	100.00	201	AAO74585.1	hemolysin II regulator HlyIIR	NA	NA	CP113428.1	2378549	2379154
GCA_026684175.1	GCA_026684175.1_02485	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	82.93	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP113428.1	2379296	2380774
GCA_026684175.1	GCA_026684175.1_02590	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	210	216	95.83	64.90	208	WP_063856935.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP113428.1	2483685	2484317
GCA_026684175.1	GCA_026684175.1_03022	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	647	652	98.93	46.30	648	WP_012478245.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP113428.1	2878287	2880230
GCA_026684175.1	GCA_026684175.1_03448	bla2	BcII family subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	EXACTP	256	256	100.00	100.00	256	WP_000799227.1	BcII family subclass B1 metallo-beta-lactamase	NF033095.1	BcII family subclass B1 metallo-beta-lactamase	CP113428.1	3270650	3271420
GCA_026684175.1	GCA_026684175.1_03743	plcA	phosphatidylinositol diacylglycerol-lyase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	329	329	100.00	99.39	329	AAP27624.1	phosphatidylinositol diacylglycerol-lyase	NA	NA	CP113428.1	3567048	3568037
GCA_026684175.1	GCA_026684175.1_05346	plcR	transcriptional regulator PlcR	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	285	285	100.00	100.00	285	AAT61178.1	transcriptional regulator PlcR	NA	NA	CP113428.1	5047476	5048333
GCA_905372625.1	GCA_905372625.1_00515	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CAJPPH010000006.1	17005	17433
GCA_017569245.1	GCA_017569245.1_00957	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP071871.1	902032	903231
GCA_017569245.1	GCA_017569245.1_01036	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP071871.1	972425	974344
GCA_017569245.1	GCA_017569245.1_01066	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP071871.1	1003387	1004037
GCA_002073235.2	GCA_002073235.2_00034	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP020401.2	22194	23099
GCA_002073235.2	GCA_002073235.2_00322	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP020401.2	334194	335720
GCA_002073235.2	GCA_002073235.2_01190	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.14	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP020401.2	1196122	1196754
GCA_002073235.2	GCA_002073235.2_01191	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP020401.2	1197158	1198396
GCA_002073235.2	GCA_002073235.2_01553	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP020401.2	1564252	1565631
GCA_937875745.1	GCA_937875745.1_00528	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CALEGQ010000020.1	85478	86332
GCA_900120335.1	GCA_900120335.1_00384	copP	copper-binding metallochaperone CopP	plus	STRESS	METAL	COPPER	COPPER	BLASTP	66	66	100.00	98.48	66	AAD05936.1	copper-binding metallochaperone CopP	NF033781.1	copper-binding metallochaperone CopP	LT635477.1	385531	385731
GCA_022291115.1	GCA_022291115.1_00436	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAANHJ010000001.1	477191	478483
GCA_022291115.1	GCA_022291115.1_00911	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAANHJ010000001.1	915193	915678
GCA_022291115.1	GCA_022291115.1_02533	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAANHJ010000012.1	34734	36026
GCA_022291115.1	GCA_022291115.1_02537	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAANHJ010000012.1	39709	40056
GCA_022291115.1	GCA_022291115.1_02545	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAANHJ010000013.1	625	1362
GCA_022291115.1	GCA_022291115.1_02546	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAANHJ010000013.1	1667	2575
GCA_022291115.1	GCA_022291115.1_02547	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAANHJ010000013.1	2572	3114
GCA_022291115.1	GCA_022291115.1_02548	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAANHJ010000013.1	3207	4001
GCA_022291115.1	GCA_022291115.1_02571	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAANHJ010000016.1	11	856
GCA_022291115.1	GCA_022291115.1_02572	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAANHJ010000016.1	963	2720
GCA_022291115.1	GCA_022291115.1_02573	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAANHJ010000016.1	2710	3090
GCA_022291115.1	GCA_022291115.1_02583	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAANHJ010000020.1	405	890
GCA_022291115.1	GCA_022291115.1_02586	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAANHJ010000021.1	400	1839
GCA_022291115.1	GCA_022291115.1_02604	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	459	459	100.00	99.78	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAANHJ010000007.1	1110	2489
GCA_015273975.1	GCA_015273975.1_00561	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACGQE010000001.1	577559	578632
GCA_015273975.1	GCA_015273975.1_01982	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGQE010000006.1	60499	61788
GCA_015273975.1	GCA_015273975.1_01984	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGQE010000006.1	62095	62475
GCA_015273975.1	GCA_015273975.1_01985	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGQE010000006.1	62465	64222
GCA_015273975.1	GCA_015273975.1_01986	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGQE010000006.1	64329	65174
GCA_015273975.1	GCA_015273975.1_02338	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACGQE010000010.1	26222	26623
GCA_015273975.1	GCA_015273975.1_02339	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGQE010000010.1	26641	27930
GCA_016403225.1	GCA_016403225.1_01274	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP066287.1	1296538	1298457
GCA_028326945.1	GCA_028326945.1_01429	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_003505402.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAQMKO010000035.1	1284	3203
GCA_028326945.1	GCA_028326945.1_01728	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.75	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMKO010000004.1	64922	66841
GCA_028326945.1	GCA_028326945.1_01737	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQMKO010000004.1	75633	76370
GCA_028326945.1	GCA_028326945.1_01743	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAQMKO010000004.1	81681	83159
GCA_000180095.1	GCA_000180095.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	BABM01000001.1	40198	40602
GCA_000180095.1	GCA_000180095.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	BABM01000001.1	40819	41562
GCA_000180095.1	GCA_000180095.1_00041	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	BABM01000001.1	44992	46998
GCA_000180095.1	GCA_000180095.1_00042	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	BABM01000001.1	47098	48855
GCA_000180095.1	GCA_000180095.1_00043	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	123	123	100.00	99.19	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	BABM01000001.1	48855	49226
GCA_000180095.1	GCA_000180095.1_00052	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BABM01000001.1	55963	56694
GCA_000180095.1	GCA_000180095.1_00053	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BABM01000001.1	56820	57602
GCA_000180095.1	GCA_000180095.1_00134	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	BABM01000001.1	151594	152952
GCA_000180095.1	GCA_000180095.1_00332	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	BABM01000001.1	380460	381815
GCA_000180095.1	GCA_000180095.1_00370	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	BABM01000001.1	415121	415732
GCA_000180095.1	GCA_000180095.1_00400	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	BABM01000001.1	439867	441786
GCA_000180095.1	GCA_000180095.1_01717	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BABM01000001.1	1763456	1764187
GCA_000180095.1	GCA_000180095.1_01718	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BABM01000001.1	1764313	1765095
GCA_000180095.1	GCA_000180095.1_01842	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BABM01000001.1	1910129	1911421
GCA_000180095.1	GCA_000180095.1_01881	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	BABM01000001.1	1942554	1943276
GCA_000180095.1	GCA_000180095.1_01882	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	BABM01000001.1	1943401	1944108
GCA_000180095.1	GCA_000180095.1_01887	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	BABM01000001.1	1948238	1949221
GCA_000180095.1	GCA_000180095.1_01888	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	BABM01000001.1	1949223	1950158
GCA_000180095.1	GCA_000180095.1_01896	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	BABM01000001.1	1956360	1957115
GCA_000180095.1	GCA_000180095.1_01897	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	BABM01000001.1	1957154	1957549
GCA_000180095.1	GCA_000180095.1_01899	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	BABM01000001.1	1958079	1958807
GCA_000180095.1	GCA_000180095.1_01900	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	BABM01000001.1	1958842	1959561
GCA_000180095.1	GCA_000180095.1_01901	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	BABM01000001.1	1959842	1960606
GCA_000180095.1	GCA_000180095.1_02057	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	BABM01000001.1	2085512	2085862
GCA_000180095.1	GCA_000180095.1_02061	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	BABM01000001.1	2087359	2087850
GCA_000180095.1	GCA_000180095.1_02065	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	BABM01000001.1	2089559	2090332
GCA_000180095.1	GCA_000180095.1_02127	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	BABM01000001.1	2134787	2135509
GCA_000180095.1	GCA_000180095.1_02128	sec3	staphylococcal enterotoxin type C3	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	BAB43097.1	staphylococcal enterotoxin type C3	NA	NA	BABM01000001.1	2135678	2136478
GCA_000180095.1	GCA_000180095.1_02130	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	99.15	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	BABM01000001.1	2138704	2139408
GCA_000180095.1	GCA_000180095.1_02155	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	BABM01000001.1	2156704	2156838
GCA_000180095.1	GCA_000180095.1_02300	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	BABM01000001.1	2308461	2309903
GCA_000180095.1	GCA_000180095.1_02472	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	BABM01000001.1	2460246	2460665
GCA_000180095.1	GCA_000180095.1_02556	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	BABM01000001.1	2548968	2549933
GCA_000180095.1	GCA_000180095.1_02557	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	BABM01000001.1	2550500	2551447
GCA_000180095.1	GCA_000180095.1_02558	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	BABM01000001.1	2551449	2552426
GCA_000180095.1	GCA_000180095.1_02636	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1115	1115	100.00	100.00	1115	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	BABM01000001.1	2630795	2634142
GCA_000180095.1	GCA_000180095.1_02784	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	BABM01000001.1	2791614	2793143
GCA_000180095.1	GCA_000180095.1_02818	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	BABM01000001.1	2836473	2837525
GCA_900444855.1	GCA_900444855.1_00559	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	96.98	76.36	385	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	UFRV01000006.1	508755	509975
GCA_900444855.1	GCA_900444855.1_02843	blaOXA-281	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-281	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_004697403.1	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-281	NF000417.2	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	UFRV01000006.1	2720064	2720888
GCA_016905945.1	GCA_016905945.1_01721	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	561	83.24	42.74	475	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFFGT010000035.1	8695	10095
GCA_030225245.1	GCA_030225245.1_01798	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASOVV010000005.1	126358	127650
GCA_003253055.1	GCA_003253055.1_01940	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089068.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	QEQB01000012.1	4159	5364
GCA_025558365.1	GCA_025558365.1_01905	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	77.86	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094714.1	1938417	1939709
GCA_007667085.1	GCA_007667085.1_00444	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	VDQK01000001.1	5879	7258
GCA_023277585.1	GCA_023277585.1_00271	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP083170.1	333263	334117
GCA_023277585.1	GCA_023277585.1_01063	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP083170.1	1343398	1344876
GCA_963394975.1	GCA_963394975.1_00690	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.55	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPP010000004.1	108945	110324
GCA_963394975.1	GCA_963394975.1_00783	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	86.99	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAUJPP010000005.1	68446	69924
GCA_001697565.1	GCA_001697565.1_00589	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016657.1	605402	606781
GCA_001697565.1	GCA_001697565.1_01636	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016657.1	1674484	1676010
GCA_001697565.1	GCA_001697565.1_01838	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016657.1	1887274	1888842
GCA_001697565.1	GCA_001697565.1_01840	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016657.1	1889667	1890299
GCA_001697565.1	GCA_001697565.1_01841	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016657.1	1890707	1891945
GCA_001697565.1	GCA_001697565.1_01968	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016657.1	2026317	2027222
GCA_900636555.1	GCA_900636555.1_00373	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LR134291.1	398125	400020
GCA_024295485.1	GCA_024295485.1_00272	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	89.44	61.42	127	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOZ010000001.1	255060	255488
GCA_024295485.1	GCA_024295485.1_00277	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOZ010000001.1	258459	259676
GCA_024295485.1	GCA_024295485.1_00278	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOZ010000001.1	259796	261259
GCA_024295485.1	GCA_024295485.1_00283	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOZ010000001.1	263209	263637
GCA_024295485.1	GCA_024295485.1_00994	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JANCOZ010000003.1	23487	25406
GCA_003351605.1	GCA_003351605.1_01019	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031237.1	1035378	1036772
GCA_017167485.1	GCA_017167485.1_00342	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFDPT010000001.1	7367	8791
GCA_001836795.1	GCA_001836795.1_00079	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV830548.1	33530	35449
GCA_001836795.1	GCA_001836795.1_01716	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV830581.1	42594	44234
GCA_002884755.1	GCA_002884755.1_00396	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089068.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	PNGS01000001.1	359913	361118
GCA_018206015.1	GCA_018206015.1_00295	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	332	641	51.79	99.70	332	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	JADRGS010000109.1	35	1033
GCA_018206015.1	GCA_018206015.1_00296	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	332	641	51.79	99.10	332	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NA	NA	JADRGS010000110.1	35	1033
GCA_018206015.1	GCA_018206015.1_02812	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	362	408	88.73	98.62	362	WP_012102963.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADRGS010000093.1	155	1243
GCA_014883915.1	GCA_014883915.1_00269	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	218	216	94.91	46.45	211	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP062789.1	261491	262147
GCA_014883915.1	GCA_014883915.1_00270	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	481	631	73.22	44.73	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP062789.1	262193	263638
GCA_014883915.1	GCA_014883915.1_03346	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	308	293	97.95	46.13	297	WP_011728509.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP062789.1	3368830	3369756
GCA_030219305.1	GCA_030219305.1_01189	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP126677.1	72607	73572
GCA_009379155.1	GCA_009379155.1_01306	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCKD01000005.1	54723	55664
GCA_000193045.2	GCA_000193045.2_01632	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	AERK01000003.1	41090	42031
GCA_009717735.1	GCA_009717735.1_00060	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	WMZD01000011.1	6662	8581
GCA_009717735.1	GCA_009717735.1_00092	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMZD01000011.1	35615	37339
GCA_009717735.1	GCA_009717735.1_00093	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMZD01000011.1	37341	39077
GCA_009717735.1	GCA_009717735.1_00312	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMZD01000015.1	17923	19386
GCA_009717735.1	GCA_009717735.1_00313	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMZD01000015.1	19506	20723
GCA_009717735.1	GCA_009717735.1_01617	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.39	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	WMZD01000004.1	287461	288939
GCA_023743875.1	GCA_023743875.1_00112	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	JAMRVB010000001.1	106631	108745
GCA_023743875.1	GCA_023743875.1_01589	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAMRVB010000001.1	1603803	1605722
GCA_012955485.1	GCA_012955485.1_00631	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	111	107	96.26	54.29	105	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP052065.1	637635	637970
GCA_018919245.1	GCA_018919245.1_00548	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAHLMD010000017.1	51886	52740
GCA_018919245.1	GCA_018919245.1_01259	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHLMD010000002.1	60551	61975
GCA_003626105.1	GCA_003626105.1_00479	blaBRO-2	class A beta-lactamase BRO-2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003665544.1	class A beta-lactamase BRO-2	NF033103.1	class A beta-lactamase	QZGY01000001.1	484001	484942
GCA_000160475.1	GCA_000160475.1_02519	tet(C)	tetracycline efflux MFS transporter Tet(C)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	396	396	100.00	100.00	396	WP_001297013.1	tetracycline efflux MFS transporter Tet(C)	NF012191.0	tetracycline efflux MFS transporter Tet(C)	GG665881.1	555	1745
GCA_000614705.1	GCA_000614705.1_00482	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	BALA01000062.1	16871	17686
GCA_000614705.1	GCA_000614705.1_01065	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001112624.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	BALA01000041.1	6284	7072
GCA_000614705.1	GCA_000614705.1_01142	abaF	fosfomycin efflux MFS transporter AbaF	plus	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	429	429	100.00	100.00	429	ABO11759.2	fosfomycin efflux MFS transporter AbaF	NA	NA	BALA01000039.1	21206	22495
GCA_000614705.1	GCA_000614705.1_01483	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	96.26	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BALA01000030.1	14678	16363
GCA_000614705.1	GCA_000614705.1_01485	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	91.67	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	BALA01000030.1	17565	17999
GCA_000614705.1	GCA_000614705.1_01587	amvA	multidrug efflux MFS transporter AmvA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	492	492	100.00	98.98	492	ACQ82816.1	multidrug efflux MFS transporter AmvA	NA	NA	BALA01000028.1	19973	21451
GCA_000614705.1	GCA_000614705.1_02556	blaOXA-98	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_001021777.1	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	NF000268.2	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase	BALA01000013.1	6454	7278
GCA_000614705.1	GCA_000614705.1_03702	nreB	nickel resistance MFS transporter NreB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	416	416	100.00	98.08	416	ADY84088.1	nickel resistance MFS transporter NreB	NA	NA	BALA01000002.1	29256	30506
GCA_000614705.1	GCA_000614705.1_03887	blaADC	ADC family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	332	383	86.68	100.00	332	WP_001211227.1	extended-spectrum class C beta-lactamase ADC-158	NF033085.1	class C beta-lactamase	BALA01000001.1	24914	25912
GCA_000614705.1	GCA_000614705.1_04086	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	PARTIALP	314	397	73.05	100.00	290	AKA30736.1	chloramphenicol efflux transporter CxpE	NA	NA	BALA01000001.1	234434	235378
GCA_001811075.1	GCA_001811075.1_00286	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KZ627133.1	21178	22818
GCA_018382395.1	GCA_018382395.1_00953	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.66	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAGZQB010000006.1	103667	105325
GCA_003493965.1	GCA_003493965.1_00385	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.26	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQJF01000001.1	422486	423880
GCA_002096895.1	GCA_002096895.1_00779	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.49	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	NCVI01000020.1	774085	775284
GCA_002096895.1	GCA_002096895.1_00875	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	NCVI01000020.1	887809	889026
GCA_002096895.1	GCA_002096895.1_00876	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	NCVI01000020.1	889146	890609
GCA_000195125.1	GCA_000195125.1_01379	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GL878565.1	1367852	1369492
GCA_019330205.1	GCA_019330205.1_00160	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073898.1	156852	158858
GCA_019330205.1	GCA_019330205.1_00161	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073898.1	158958	160715
GCA_019330205.1	GCA_019330205.1_00162	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073898.1	160715	161086
GCA_019330205.1	GCA_019330205.1_00208	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073898.1	200052	200390
GCA_019330205.1	GCA_019330205.1_00209	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073898.1	200448	202091
GCA_019330205.1	GCA_019330205.1_00210	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073898.1	202173	202823
GCA_019330205.1	GCA_019330205.1_00220	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073898.1	211609	212907
GCA_019330205.1	GCA_019330205.1_00223	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073898.1	215076	215423
GCA_019330205.1	GCA_019330205.1_00300	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073898.1	298061	298297
GCA_019330205.1	GCA_019330205.1_00351	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073898.1	356095	357162
GCA_019330205.1	GCA_019330205.1_01839	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073898.1	1872240	1872620
GCA_019330205.1	GCA_019330205.1_01840	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073898.1	1872610	1874367
GCA_019330205.1	GCA_019330205.1_01841	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073898.1	1874474	1875319
GCA_019330205.1	GCA_019330205.1_01862	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073898.1	1894139	1894780
GCA_019330205.1	GCA_019330205.1_01983	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073898.1	1970408	1971847
GCA_019330205.1	GCA_019330205.1_01986	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073898.1	1973603	1974088
GCA_019330205.1	GCA_019330205.1_02750	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073899.1	7526	8086
GCA_019330205.1	GCA_019330205.1_02751	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073899.1	8271	9815
GCA_001697385.1	GCA_001697385.1_00997	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016648.1	1018321	1019847
GCA_001697385.1	GCA_001697385.1_01198	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016648.1	1230068	1231636
GCA_001697385.1	GCA_001697385.1_01200	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016648.1	1232461	1233093
GCA_001697385.1	GCA_001697385.1_01201	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016648.1	1233501	1234739
GCA_001697385.1	GCA_001697385.1_01328	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016648.1	1369102	1370007
GCA_001697385.1	GCA_001697385.1_02039	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016648.1	2111518	2112897
GCA_000252265.2	GCA_000252265.2_01730	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AILG01000003.1	832382	833581
GCA_022689165.1	GCA_022689165.1_01085	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXX010000002.1	148219	148638
GCA_022689165.1	GCA_022689165.1_01772	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALCXX010000005.1	24790	25191
GCA_022689165.1	GCA_022689165.1_01773	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXX010000005.1	25209	26498
GCA_022689165.1	GCA_022689165.1_01913	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXX010000005.1	186831	188123
GCA_022689165.1	GCA_022689165.1_02248	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXX010000007.1	146387	147460
GCA_005890575.1	GCA_005890575.1_00130	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQQ01000106.1	5280	6413
GCA_005890575.1	GCA_005890575.1_00925	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	SOQQ01000023.1	23164	23901
GCA_005890575.1	GCA_005890575.1_00926	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	SOQQ01000023.1	25008	26927
GCA_018373485.1	GCA_018373485.1_00090	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JAHAGZ010000004.1	72999	74393
GCA_027663645.1	GCA_027663645.1_00677	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQDHP010000001.1	662073	662501
GCA_900458715.1	GCA_900458715.1_00395	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHEK01000002.1	435225	436517
GCA_900458715.1	GCA_900458715.1_02352	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UHEK01000001.1	32907	33254
GCA_900458715.1	GCA_900458715.1_02356	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHEK01000001.1	36937	38229
GCA_900458715.1	GCA_900458715.1_02408	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	PARTIALP	378	429	75.52	97.84	324	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	UHEK01000001.1	85076	86212
GCA_900458715.1	GCA_900458715.1_02409	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	104	131	79.39	97.12	104	AAA27589.1	thioredoxin-dependent arsenate reductase	NA	NA	UHEK01000001.1	86312	86626
GCA_000220865.1	GCA_000220865.1_01472	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	GL985621.1	14427	15806
GCA_019375725.1	GCA_019375725.1_00548	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCJ010000019.1	29787	30752
GCA_019375725.1	GCA_019375725.1_01496	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCJ010000036.1	4096	5292
GCA_019375725.1	GCA_019375725.1_02103	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCJ010000052.1	7941	8741
GCA_000222745.2	GCA_000222745.2_00359	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.15	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	AFUD01000045.1	14829	16565
GCA_000222745.2	GCA_000222745.2_00360	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.30	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	AFUD01000045.1	16567	18291
GCA_029691705.1	GCA_029691705.1_00067	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	97.62	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121486.1	67532	67912
GCA_029691705.1	GCA_029691705.1_00068	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121486.1	67902	69659
GCA_029691705.1	GCA_029691705.1_00069	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121486.1	69766	70611
GCA_029691705.1	GCA_029691705.1_00770	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP121486.1	787611	788039
GCA_029691705.1	GCA_029691705.1_00843	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP121486.1	870399	870746
GCA_029691705.1	GCA_029691705.1_00846	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121486.1	872924	874213
GCA_020731325.1	GCA_020731325.1_00665	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	77.24	51.58	95	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAJFOI010000001.1	640918	641283
GCA_014264985.1	GCA_014264985.1_00131	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMXZ010000013.1	16606	18150
GCA_014264985.1	GCA_014264985.1_00132	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMXZ010000013.1	18334	18894
GCA_014264985.1	GCA_014264985.1_00202	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMXZ010000017.1	7103	7450
GCA_014264985.1	GCA_014264985.1_00206	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXZ010000017.1	11133	12425
GCA_014264985.1	GCA_014264985.1_00211	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMXZ010000018.1	5352	5723
GCA_014264985.1	GCA_014264985.1_00212	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMXZ010000018.1	5723	7480
GCA_014264985.1	GCA_014264985.1_00213	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMXZ010000018.1	7580	9586
GCA_014264985.1	GCA_014264985.1_00224	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMXZ010000020.1	238	981
GCA_014264985.1	GCA_014264985.1_00225	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMXZ010000020.1	1198	1602
GCA_014264985.1	GCA_014264985.1_00230	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMXZ010000022.1	421	1155
GCA_014264985.1	GCA_014264985.1_00899	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXZ010000005.1	41990	43282
GCA_014264985.1	GCA_014264985.1_00957	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMXZ010000006.1	10298	10678
GCA_014264985.1	GCA_014264985.1_00958	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMXZ010000006.1	10668	12425
GCA_014264985.1	GCA_014264985.1_00959	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMXZ010000006.1	12532	13377
GCA_014264985.1	GCA_014264985.1_01075	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMXZ010000007.1	45457	47097
GCA_000204665.1	GCA_000204665.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP002643.1	39530	41536
GCA_000204665.1	GCA_000204665.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP002643.1	41636	43393
GCA_000204665.1	GCA_000204665.1_00036	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	67	123	54.47	100.00	67	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NA	NA	CP002643.1	43393	43596
GCA_000204665.1	GCA_000204665.1_00115	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100289.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP002643.1	127475	128833
GCA_000204665.1	GCA_000204665.1_00312	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP002643.1	353808	355163
GCA_000204665.1	GCA_000204665.1_00375	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP002643.1	403819	404430
GCA_000204665.1	GCA_000204665.1_00402	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP002643.1	427033	428952
GCA_000204665.1	GCA_000204665.1_00884	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.17	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP002643.1	906580	907308
GCA_000204665.1	GCA_000204665.1_00885	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.59	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP002643.1	907332	908060
GCA_000204665.1	GCA_000204665.1_01631	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP002643.1	1680466	1681218
GCA_000204665.1	GCA_000204665.1_01684	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	191	243	78.60	100.00	191	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP002643.1	1733378	1733953
GCA_000204665.1	GCA_000204665.1_01685	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP002643.1	1734235	1735017
GCA_000204665.1	GCA_000204665.1_01814	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP002643.1	1882351	1883643
GCA_000204665.1	GCA_000204665.1_01859	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP002643.1	1921631	1922353
GCA_000204665.1	GCA_000204665.1_01860	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP002643.1	1922478	1923185
GCA_000204665.1	GCA_000204665.1_01871	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP002643.1	1934567	1935502
GCA_000204665.1	GCA_000204665.1_02026	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP002643.1	2064958	2065308
GCA_000204665.1	GCA_000204665.1_02030	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP002643.1	2066806	2067297
GCA_000204665.1	GCA_000204665.1_02034	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP002643.1	2069006	2069779
GCA_000204665.1	GCA_000204665.1_02128	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP002643.1	2140926	2141060
GCA_000204665.1	GCA_000204665.1_02279	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.79	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP002643.1	2296172	2297614
GCA_000204665.1	GCA_000204665.1_02458	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP002643.1	2453414	2453833
GCA_000204665.1	GCA_000204665.1_02545	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP002643.1	2543076	2544041
GCA_000204665.1	GCA_000204665.1_02546	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP002643.1	2544609	2545556
GCA_000204665.1	GCA_000204665.1_02547	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP002643.1	2545558	2546535
GCA_000204665.1	GCA_000204665.1_02719	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP002643.1	2723943	2724323
GCA_000204665.1	GCA_000204665.1_02720	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP002643.1	2724313	2726070
GCA_000204665.1	GCA_000204665.1_02721	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	209	281	74.38	99.52	209	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033103.1	class A beta-lactamase	CP002643.1	2726392	2727021
GCA_000204665.1	GCA_000204665.1_02780	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP002643.1	2786813	2787595
GCA_000204665.1	GCA_000204665.1_02816	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP002643.1	2821579	2823108
GCA_000204665.1	GCA_000204665.1_02852	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	354	350	100.00	97.74	354	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP002643.1	2865439	2866503
GCA_029926605.1	GCA_029926605.1_00145	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREGY010000013.1	6010	6411
GCA_029926605.1	GCA_029926605.1_00146	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREGY010000013.1	6429	7718
GCA_029926605.1	GCA_029926605.1_00147	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAREGY010000013.1	7718	8032
GCA_029926605.1	GCA_029926605.1_00458	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREGY010000001.1	318227	319519
GCA_000191525.1	GCA_000191525.1_00902	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP002424.1	913825	915204
GCA_000191525.1	GCA_000191525.1_01771	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.54	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP002424.1	1814860	1816098
GCA_000191525.1	GCA_000191525.1_01772	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP002424.1	1816502	1817134
GCA_000191525.1	GCA_000191525.1_01774	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP002424.1	1817771	1819339
GCA_000191525.1	GCA_000191525.1_02008	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.62	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP002424.1	2089299	2090825
GCA_902375175.1	GCA_902375175.1_00511	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	58.24	261	WP_003161096.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CABKSW010000001.1	486300	487082
GCA_902375175.1	GCA_902375175.1_02162	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	135	100.00	68.89	135	WP_003082280.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CABKSW010000001.1	2214215	2214622
GCA_902375175.1	GCA_902375175.1_03988	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	410	414	95.89	71.11	398	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CABKSW010000001.1	4160869	4162101
GCA_902375175.1	GCA_902375175.1_04226	blaLUT-1	extended-spectrum class A beta-lactamase LUT-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	296	296	100.00	100.00	296	WP_010798607.1	extended-spectrum class A beta-lactamase LUT-1	NF000324.2	LUT family class A beta-lactamase	CABKSW010000002.1	144915	145805
GCA_902375175.1	GCA_902375175.1_05142	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	954	949	100.00	93.40	954	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CABKSW010000004.1	44862	47726
GCA_026782365.1	GCA_026782365.1_01677	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKUWK010000008.1	318117	318545
GCA_026782365.1	GCA_026782365.1_01682	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAKUWK010000008.1	320540	322003
GCA_026782365.1	GCA_026782365.1_01683	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAKUWK010000008.1	322123	323340
GCA_900637725.1	GCA_900637725.1_02370	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	284	98.94	55.87	281	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	LR134406.1	2607455	2608303
GCA_009379515.1	GCA_009379515.1_01190	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCKN01000004.1	110860	111801
GCA_013415405.1	GCA_013415405.1_01804	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACBYA010000019.1	59095	60168
GCA_013415405.1	GCA_013415405.1_01987	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACBYA010000021.1	82590	83879
GCA_013415405.1	GCA_013415405.1_01988	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACBYA010000021.1	83897	84298
GCA_013415405.1	GCA_013415405.1_02253	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACBYA010000023.1	60523	61812
GCA_003044345.1	GCA_003044345.1_00066	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	PQVC01000010.1	73377	74756
GCA_003044345.1	GCA_003044345.1_01928	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043265.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	PQVC01000059.1	156	971
GCA_003044345.1	GCA_003044345.1_02069	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	PQVC01000067.1	1212	2072
GCA_003044345.1	GCA_003044345.1_02167	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	PQVC01000072.1	43	879
GCA_003044345.1	GCA_003044345.1_02168	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	PQVC01000072.1	879	1298
GCA_003044345.1	GCA_003044345.1_02169	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	PQVC01000073.1	215	1030
GCA_003470225.1	GCA_003470225.1_00025	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	284	89.08	57.31	253	WP_006555379.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	QRHE01000001.1	29818	30717
GCA_003470225.1	GCA_003470225.1_00430	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	100.00	43.09	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	QRHE01000010.1	32444	32797
GCA_003470225.1	GCA_003470225.1_00549	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	99.84	98.75	638	WP_063856415.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	QRHE01000012.1	8735	10654
GCA_003470225.1	GCA_003470225.1_00763	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	486	492	100.00	68.50	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	QRHE01000015.1	41690	43150
GCA_003470225.1	GCA_003470225.1_01203	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	250	245	100.00	99.59	245	WP_002321849.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	QRHE01000003.1	6328	7080
GCA_003470225.1	GCA_003470225.1_01204	aadE	aminoglycoside 6-adenylyltransferase AadE	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	288	288	100.00	100.00	288	WP_001255868.1	aminoglycoside 6-adenylyltransferase AadE	NF033084.2	aminoglycoside 6-nucleotidyltransferase	QRHE01000003.1	7706	8572
GCA_000162455.1	GCA_000162455.1_00810	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	GG739942.1	21073	21873
GCA_009717375.1	GCA_009717375.1_00661	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYL01000002.1	33473	34936
GCA_009717375.1	GCA_009717375.1_00662	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYL01000002.1	35056	36273
GCA_015261305.1	GCA_015261305.1_00003	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.25	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JABZVA010000010.1	1637	2437
GCA_015261305.1	GCA_015261305.1_00004	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	PARTIALP	248	388	63.92	100.00	248	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NA	NA	JABZVA010000010.1	2650	3396
GCA_003856395.1	GCA_003856395.1_00699	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP034111.1	683372	685378
GCA_003856395.1	GCA_003856395.1_00740	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP034111.1	730170	731459
GCA_003856395.1	GCA_003856395.1_00743	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP034111.1	733637	733984
GCA_003856395.1	GCA_003856395.1_00817	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	98.59	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP034111.1	819397	819825
GCA_003856395.1	GCA_003856395.1_00869	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP034111.1	879021	880088
GCA_003856395.1	GCA_003856395.1_01531	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP034111.1	1552382	1553227
GCA_003856395.1	GCA_003856395.1_01532	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP034111.1	1553334	1555091
GCA_003856395.1	GCA_003856395.1_01533	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP034111.1	1555081	1555461
GCA_003856395.1	GCA_003856395.1_02473	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	CP034113.1	3553	3876
GCA_003856395.1	GCA_003856395.1_02478	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP034113.1	6003	7442
GCA_003856395.1	GCA_003856395.1_02503	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP034113.1	31077	32456
GCA_003856395.1	GCA_003856395.1_02506	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	PARTIALP	703	1024	68.65	99.86	703	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NA	NA	CP034113.1	33828	35939
GCA_014265005.1	GCA_014265005.1_00131	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMXV010000013.1	16606	18150
GCA_014265005.1	GCA_014265005.1_00132	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMXV010000013.1	18334	18894
GCA_014265005.1	GCA_014265005.1_00203	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMXV010000017.1	7103	7450
GCA_014265005.1	GCA_014265005.1_00207	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXV010000017.1	11133	12425
GCA_014265005.1	GCA_014265005.1_00212	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMXV010000018.1	5352	5723
GCA_014265005.1	GCA_014265005.1_00213	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMXV010000018.1	5723	7480
GCA_014265005.1	GCA_014265005.1_00214	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMXV010000018.1	7580	9586
GCA_014265005.1	GCA_014265005.1_00218	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMXV010000019.1	238	981
GCA_014265005.1	GCA_014265005.1_00219	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMXV010000019.1	1198	1602
GCA_014265005.1	GCA_014265005.1_00225	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMXV010000021.1	1475	2209
GCA_014265005.1	GCA_014265005.1_00907	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMXV010000005.1	53166	54806
GCA_014265005.1	GCA_014265005.1_00997	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXV010000006.1	42420	43712
GCA_014265005.1	GCA_014265005.1_01048	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMXV010000007.1	10298	10678
GCA_014265005.1	GCA_014265005.1_01049	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMXV010000007.1	10668	12425
GCA_014265005.1	GCA_014265005.1_01050	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMXV010000007.1	12532	13377
GCA_000367205.1	GCA_000367205.1_00039	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP005287.1	44178	44588
GCA_001808895.1	GCA_001808895.1_01036	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV794750.1	873	2297
GCA_001808895.1	GCA_001808895.1_01949	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	182	284	61.97	96.02	176	WP_011152925.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV794788.1	18593	19141
GCA_001042925.1	GCA_001042925.1_00647	catB7	type B-4 chloramphenicol O-acetyltransferase CatB7	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	212	212	100.00	98.58	212	WP_003112709.1	type B-4 chloramphenicol O-acetyltransferase CatB7	NF000490.1	type B chloramphenicol O-acetyltransferase	JYLC01000016.1	8466	9104
GCA_001042925.1	GCA_001042925.1_01169	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	135	135	100.00	99.26	135	WP_003082280.1	FosA family fosfomycin resistance glutathione transferase	NF000094.1	FosA family fosfomycin resistance glutathione transferase	JYLC01000001.1	456494	456901
GCA_001042925.1	GCA_001042925.1_02224	mexA	multidrug efflux RND transporter periplasmic adaptor subunit MexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	383	383	100.00	100.00	383	AAA74436.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	NF033834.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	JYLC01000002.1	231853	233004
GCA_001042925.1	GCA_001042925.1_02711	blaOXA-904	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-904	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	262	262	100.00	100.00	262	WP_003122322.1	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-904	NF000432.2	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase	JYLC01000002.1	754294	755082
GCA_001042925.1	GCA_001042925.1_03607	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	414	414	100.00	100.00	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	JYLC01000003.1	767069	768313
GCA_001042925.1	GCA_001042925.1_05491	mexX	multidrug efflux RND transporter periplasmic adaptor subunit MexX	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	396	396	100.00	99.24	396	AAF14522.1	multidrug efflux RND transporter periplasmic adaptor subunit MexX	NA	NA	JYLC01000007.1	224485	225675
GCA_001042925.1	GCA_001042925.1_05821	aph(3)-IIb	aminoglycoside O-phosphotransferase APH(3)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	267	268	100.00	99.25	268	WP_003113011.1	aminoglycoside O-phosphotransferase APH(3)-IIb	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	JYLC01000009.1	106709	107512
GCA_001042925.1	GCA_001042925.1_05830	blaPDC-5	extended-spectrum class C beta-lactamase PDC-5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	397	397	100.00	100.00	397	WP_003119095.1	extended-spectrum class C beta-lactamase PDC-5	NF000422.6	PDC family class C beta-lactamase	JYLC01000009.1	119866	121059
GCA_003952785.1	GCA_003952785.1_00017	blaOXA-333	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-333	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_063862693.1	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-333	NF000417.2	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	CP022298.1	16828	17652
GCA_003952785.1	GCA_003952785.1_01311	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	96.98	76.62	385	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP022298.1	1281049	1282269
GCA_003952785.1	GCA_003952785.1_02820	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	388	390	99.49	67.53	388	WP_057991970.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP022298.1	2778549	2779715
GCA_002014925.1	GCA_002014925.1_00722	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	MUXQ01000020.1	41309	42772
GCA_002014925.1	GCA_002014925.1_00723	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	MUXQ01000020.1	42793	44010
GCA_001553045.1	GCA_001553045.1_01281	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.09	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KQ960078.1	426	1904
GCA_030585585.1	GCA_030585585.1_02168	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_001829870.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CP089964.1	3704	4189
GCA_014982375.1	GCA_014982375.1_00730	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADCLV010000017.1	11896	13113
GCA_014982375.1	GCA_014982375.1_00731	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADCLV010000017.1	13233	14696
GCA_014982375.1	GCA_014982375.1_00737	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	338	639	52.74	99.41	337	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	JADCLV010000017.1	17323	18339
GCA_014982375.1	GCA_014982375.1_00999	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JADCLV010000020.1	10020	10880
GCA_022689525.1	GCA_022689525.1_00336	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXE010000014.1	8155	9447
GCA_022689525.1	GCA_022689525.1_01694	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXE010000003.1	42943	43362
GCA_022689525.1	GCA_022689525.1_02214	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXE010000007.1	14510	15583
GCA_001697745.1	GCA_001697745.1_00475	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016666.1	473014	474540
GCA_001697745.1	GCA_001697745.1_00675	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016666.1	685038	686606
GCA_001697745.1	GCA_001697745.1_00677	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016666.1	687431	688063
GCA_001697745.1	GCA_001697745.1_00678	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016666.1	688471	689709
GCA_001697745.1	GCA_001697745.1_01514	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016666.1	1566750	1568129
GCA_017726655.1	GCA_017726655.1_01207	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	274	264	94.70	53.10	258	WP_032490761.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP072308.1	1165663	1166487
GCA_017726655.1	GCA_017726655.1_02745	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	149	146	94.52	57.25	138	WP_047729810.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP072308.1	2738383	2738832
GCA_017726655.1	GCA_017726655.1_02973	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	384	396	97.22	53.89	386	WP_280147732.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP072309.1	72478	73632
GCA_017726655.1	GCA_017726655.1_03595	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	146	147	97.28	61.54	143	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP072309.1	739801	740241
GCA_017726655.1	GCA_017726655.1_04754	catB1	type B-1 chloramphenicol O-acetyltransferase CatB1	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	209	209	99.04	93.72	207	WP_010974114.1	type B-1 chloramphenicol O-acetyltransferase CatB1	NF000490.1	type B chloramphenicol O-acetyltransferase	CP072309.1	1972474	1973103
GCA_018127785.1	GCA_018127785.1_00833	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP072389.1	1035884	1036849
GCA_018127785.1	GCA_018127785.1_01219	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072390.1	92650	93840
GCA_014287575.1	GCA_014287575.1_00347	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JACOOG010000001.1	444572	445372
GCA_014287575.1	GCA_014287575.1_00792	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JACOOG010000001.1	986512	988437
GCA_014287575.1	GCA_014287575.1_00809	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JACOOG010000001.1	1009215	1010015
GCA_014287575.1	GCA_014287575.1_02696	cblA	CblA family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	296	296	100.00	96.28	296	WP_005827792.1	CblA family class A beta-lactamase	NF033098.1	CblA family class A beta-lactamase	JACOOG010000001.1	3198513	3199403
GCA_014287575.1	GCA_014287575.1_03125	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JACOOG010000001.1	3659394	3659906
GCA_014287575.1	GCA_014287575.1_03126	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JACOOG010000001.1	3659931	3661136
GCA_000430565.1	GCA_000430565.1_01817	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	AUMG01000031.1	14147	15112
GCA_000430565.1	GCA_000430565.1_02022	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	AUMG01000039.1	3672	5597
GCA_002861015.1	GCA_002861015.1_01789	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PKIQ01000007.1	4452	6092
GCA_014266705.1	GCA_014266705.1_00278	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JACMVN010000015.1	16158	17624
GCA_014266705.1	GCA_014266705.1_00279	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JACMVN010000015.1	17723	18622
GCA_014266705.1	GCA_014266705.1_00322	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMVN010000020.1	287	1030
GCA_014266705.1	GCA_014266705.1_00323	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMVN010000020.1	1247	1651
GCA_014266705.1	GCA_014266705.1_00432	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMVN010000002.1	93434	94279
GCA_014266705.1	GCA_014266705.1_00433	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMVN010000002.1	94386	96143
GCA_014266705.1	GCA_014266705.1_00434	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMVN010000002.1	96133	96513
GCA_014266705.1	GCA_014266705.1_00961	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVN010000004.1	42419	43711
GCA_014266705.1	GCA_014266705.1_01013	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMVN010000004.1	99661	100008
GCA_014266705.1	GCA_014266705.1_01017	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVN010000004.1	103691	104983
GCA_014266705.1	GCA_014266705.1_01032	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	JACMVN010000004.1	121875	122513
GCA_000368905.1	GCA_000368905.1_01648	blaOXA-103	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-103	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	273	273	100.00	100.00	273	WP_005025422.1	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-103	NF000266.2	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase	KB849749.1	479382	480203
GCA_000368905.1	GCA_000368905.1_02360	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	287	285	97.54	40.14	284	WP_063864745.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	KB849749.1	1226711	1227574
GCA_000368905.1	GCA_000368905.1_02618	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	397	97.98	77.38	389	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	KB849749.1	1476474	1477661
GCA_029691875.1	GCA_029691875.1_00209	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP121497.1	211974	213980
GCA_029691875.1	GCA_029691875.1_00210	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP121497.1	214080	215066
GCA_029691875.1	GCA_029691875.1_00296	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP121497.1	309541	309969
GCA_029691875.1	GCA_029691875.1_00346	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP121497.1	367565	368632
GCA_029691875.1	GCA_029691875.1_00403	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP121497.1	440200	441099
GCA_029691875.1	GCA_029691875.1_00404	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP121497.1	441198	442664
GCA_029691875.1	GCA_029691875.1_01036	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121497.1	1059171	1060016
GCA_029691875.1	GCA_029691875.1_01037	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121497.1	1060123	1061880
GCA_029691875.1	GCA_029691875.1_01038	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121497.1	1061870	1062250
GCA_029691875.1	GCA_029691875.1_02391	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP121499.1	4454	5833
GCA_003943255.1	GCA_003943255.1_00619	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJOZ01000002.1	134096	134524
GCA_026651425.1	GCA_026651425.1_00057	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	213	221	95.02	68.57	210	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP102328.1	52267	52908
GCA_026651425.1	GCA_026651425.1_02455	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	260	259	99.61	41.76	261	WP_014386410.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	CP102328.1	2647931	2648713
GCA_026651425.1	GCA_026651425.1_02640	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	414	100.00	75.48	416	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP102328.1	2888324	2889565
GCA_026651425.1	GCA_026651425.1_02715	blaPOM-1	subclass B3 metallo-beta-lactamase POM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	286	286	100.00	100.00	286	WP_044403015.1	subclass B3 metallo-beta-lactamase POM-1	NF000438.2	POM family subclass B3 metallo-beta-lactamase	CP102328.1	2966206	2967066
GCA_947097335.1	GCA_947097335.1_01572	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_002244796.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CAMURA010000058.1	1343	2548
GCA_019375895.1	GCA_019375895.1_00729	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCV010000001.1	220882	222072
GCA_019375895.1	GCA_019375895.1_01447	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCV010000035.1	2150	2950
GCA_019375895.1	GCA_019375895.1_01501	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCV010000039.1	3049	4974
GCA_030176095.1	GCA_030176095.1_01038	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVA010000026.1	803	1657
GCA_000160215.1	GCA_000160215.1_00061	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	GG696781.1	2597	2920
GCA_000160215.1	GCA_000160215.1_00245	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	GG696775.1	66671	67960
GCA_000160215.1	GCA_000160215.1_00892	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	GG696774.1	604469	605542
GCA_000160215.1	GCA_000160215.1_00963	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	69.06	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	GG696774.1	694424	694861
GCA_000160215.1	GCA_000160215.1_01663	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	GG696773.1	449096	450388
GCA_000160215.1	GCA_000160215.1_01667	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	GG696773.1	454071	454418
GCA_000160215.1	GCA_000160215.1_01716	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	GG696773.1	497147	497527
GCA_000160215.1	GCA_000160215.1_01717	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	GG696773.1	497517	499274
GCA_000160215.1	GCA_000160215.1_01718	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	GG696773.1	499381	500226
GCA_015679865.1	GCA_015679865.1_00455	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030823.1	465765	467144
GCA_015679865.1	GCA_015679865.1_01199	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP030823.1	1229757	1230662
GCA_015679865.1	GCA_015679865.1_01336	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030823.1	1373930	1375168
GCA_015679865.1	GCA_015679865.1_01338	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	215	210	74.29	98.72	156	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030823.1	1376659	1377306
GCA_015679865.1	GCA_015679865.1_01340	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030823.1	1378117	1379685
GCA_015679865.1	GCA_015679865.1_01530	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030823.1	1581772	1583298
GCA_000173875.1	GCA_000173875.1_00025	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	271	271	100.00	99.26	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	ACDX02000045.1	518	1333
GCA_000173875.1	GCA_000173875.1_01729	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	ACDX02000004.1	40956	42335
GCA_009379685.1	GCA_009379685.1_01292	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCKS01000005.1	111925	112866
GCA_001679305.1	GCA_001679305.1_01107	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.41	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LZPG01000017.1	86116	87510
GCA_003944065.1	GCA_003944065.1_00649	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJOS01000001.1	665799	666227
GCA_001697125.1	GCA_001697125.1_00333	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.23	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP012392.1	335151	336677
GCA_001697125.1	GCA_001697125.1_00521	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP012392.1	535933	537501
GCA_001697125.1	GCA_001697125.1_00523	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP012392.1	538326	538958
GCA_001697125.1	GCA_001697125.1_00524	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.79	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP012392.1	539366	540604
GCA_001697125.1	GCA_001697125.1_00646	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP012392.1	672839	673744
GCA_001697125.1	GCA_001697125.1_01368	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP012392.1	1422596	1423975
GCA_001064875.1	GCA_001064875.1_02259	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	86.18	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JVIM01000078.1	1769	3247
GCA_022815445.1	GCA_022815445.1_01310	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALGYQ010000012.1	11	856
GCA_022815445.1	GCA_022815445.1_01311	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALGYQ010000012.1	963	2720
GCA_022815445.1	GCA_022815445.1_01312	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALGYQ010000012.1	2710	3090
GCA_022815445.1	GCA_022815445.1_01315	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALGYQ010000012.1	4876	5436
GCA_022815445.1	GCA_022815445.1_01316	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALGYQ010000012.1	5620	7164
GCA_022815445.1	GCA_022815445.1_01348	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JALGYQ010000013.1	10336	11322
GCA_022815445.1	GCA_022815445.1_01349	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JALGYQ010000013.1	11422	13428
GCA_022815445.1	GCA_022815445.1_01403	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JALGYQ010000019.1	982	1725
GCA_022815445.1	GCA_022815445.1_01404	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JALGYQ010000019.1	1948	2346
GCA_022815445.1	GCA_022815445.1_01706	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALGYQ010000002.1	287529	288821
GCA_022815445.1	GCA_022815445.1_01732	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JALGYQ010000020.1	1106	4180
GCA_022815445.1	GCA_022815445.1_02475	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JALGYQ010000008.1	12657	13154
GCA_000738265.1	GCA_000738265.1_00184	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCQ01000001.1	213969	214823
GCA_963392915.1	GCA_963392915.1_00072	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJNX010000001.1	79875	81113
GCA_963392915.1	GCA_963392915.1_00073	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJNX010000001.1	81130	81993
GCA_963392915.1	GCA_963392915.1_00551	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.55	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJNX010000003.1	129038	130417
GCA_963392915.1	GCA_963392915.1_01115	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJNX010000006.1	141544	143070
GCA_963392915.1	GCA_963392915.1_01886	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJNX010000016.1	24576	25481
GCA_024668785.2	GCA_024668785.2_00106	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP102568.2	110810	111655
GCA_024668785.2	GCA_024668785.2_00107	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP102568.2	111762	113519
GCA_024668785.2	GCA_024668785.2_00108	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP102568.2	113509	113889
GCA_024668785.2	GCA_024668785.2_00119	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP102568.2	123740	124282
GCA_024668785.2	GCA_024668785.2_00120	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP102568.2	124375	125169
GCA_024668785.2	GCA_024668785.2_01229	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP102568.2	1249435	1251354
GCA_024668785.2	GCA_024668785.2_01399	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP102568.2	1381404	1382249
GCA_024668785.2	GCA_024668785.2_01402	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	95.24	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP102568.2	1384104	1384484
GCA_024668785.2	GCA_024668785.2_01725	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP102568.2	1655762	1656259
GCA_024668785.2	GCA_024668785.2_02230	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102568.2	2177508	2178800
GCA_024668785.2	GCA_024668785.2_02304	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102568.2	2247247	2248539
GCA_024668785.2	GCA_024668785.2_02305	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP102568.2	2248557	2248949
GCA_024668785.2	GCA_024668785.2_02314	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP102568.2	2258691	2260697
GCA_024668785.2	GCA_024668785.2_02317	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102568.2	2261994	2263283
GCA_024668785.2	GCA_024668785.2_02318	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP102568.2	2263301	2263702
GCA_024668785.2	GCA_024668785.2_02647	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP102569.2	7553	9019
GCA_024668785.2	GCA_024668785.2_02652	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP102569.2	12944	16018
GCA_030062785.1	GCA_030062785.1_01952	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP114544.1	2956	3693
GCA_030062785.1	GCA_030062785.1_01954	vat(E)	streptogramin A O-acetyltransferase Vat(E)	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	EXACTP	214	214	100.00	100.00	214	WP_002328813.1	streptogramin A O-acetyltransferase Vat(E)	NF000020.1	streptogramin A O-acetyltransferase Vat(E)	CP114544.1	4403	5047
GCA_004104015.1	GCA_004104015.1_01626	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	272	246	100.00	60.78	255	WP_038563636.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	RYFV01000036.1	4736	5554
GCA_018499385.1	GCA_018499385.1_00274	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHDAE010000013.1	3031	3459
GCA_018499385.1	GCA_018499385.1_00479	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAHDAE010000016.1	7694	9157
GCA_018499385.1	GCA_018499385.1_00480	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAHDAE010000016.1	9277	10494
GCA_018499385.1	GCA_018499385.1_00717	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHDAE010000001.1	25293	27212
GCA_018499385.1	GCA_018499385.1_01607	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.49	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAHDAE010000004.1	58096	59832
GCA_018499385.1	GCA_018499385.1_01608	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAHDAE010000004.1	59834	61558
GCA_025150765.1	GCA_025150765.1_01964	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.85	41.31	472	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXTH010000037.1	1282	2676
GCA_947039915.1	GCA_947039915.1_01102	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	91.04	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAMRAE010000012.1	6608	8086
GCA_002998595.1	GCA_002998595.1_01577	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP027235.1	1602845	1604239
GCA_000473485.1	GCA_000473485.1_01841	norM	multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	462	462	99.78	92.19	461	AAG27731.1	multidrug efflux MATE transporter NorM	NA	NA	KI421535.1	1900504	1901892
GCA_000473485.1	GCA_000473485.1_02204	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	397	396	98.48	87.95	390	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	KI421535.1	2284522	2285715
GCA_000473485.1	GCA_000473485.1_03982	blaPEN-bcc	PEN family class A beta-lactamase, Bcc-type	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	312	312	100.00	100.00	312	WP_027789588.1	PEN family class A beta-lactamase, Bcc-type	NF000320.3	PEN family class A beta-lactamase, Bcc-type	KI421536.1	358943	359881
GCA_000473485.1	GCA_000473485.1_04378	blaOXA	OXA-1043 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	100.00	84.76	269	WP_077021671.1	OXA-1043 family class D beta-lactamase	NF040600.1	OXA-1043 family class D beta-lactamase	KI421536.1	792941	793750
GCA_000473485.1	GCA_000473485.1_05222	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	84.62	52.07	121	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	KI421536.1	1737860	1738255
GCA_000473485.1	GCA_000473485.1_05490	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	410	395	99.24	63.01	392	WP_031633255.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	KI421536.1	2041026	2042258
GCA_000473485.1	GCA_000473485.1_05824	ant(3)	ANT(3)-I family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	HMM	270	262	99.62	63.98	261	WP_071846244.1	ANT(3)-I family aminoglycoside nucleotidyltransferase	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	KI421536.1	2406221	2407033
GCA_000473485.1	GCA_000473485.1_06668	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	99.67	55.15	301	WP_105807557.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	KI421536.1	3365442	3366341
GCA_000473485.1	GCA_000473485.1_06987	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	389	408	92.16	56.76	377	WP_322881141.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	KI421538.1	119296	120465
GCA_000462955.1	GCA_000462955.1_00094	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP006706.1	99953	101311
GCA_000462955.1	GCA_000462955.1_00287	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP006706.1	327422	328777
GCA_000462955.1	GCA_000462955.1_00323	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP006706.1	362009	362620
GCA_000462955.1	GCA_000462955.1_00629	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP006706.1	666501	666992
GCA_000462955.1	GCA_000462955.1_00635	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP006706.1	669207	669557
GCA_000462955.1	GCA_000462955.1_01717	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP006706.1	1779532	1780824
GCA_000462955.1	GCA_000462955.1_01762	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	97.08	240	ABD31003.1	serine protease SplB	NA	NA	CP006706.1	1817250	1817972
GCA_000462955.1	GCA_000462955.1_01763	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	96.60	235	ABD31004.1	serine protease SplA	NA	NA	CP006706.1	1818097	1818804
GCA_000462955.1	GCA_000462955.1_01769	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.36	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP006706.1	1823899	1824834
GCA_000462955.1	GCA_000462955.1_01775	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.55	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP006706.1	1828713	1829498
GCA_000462955.1	GCA_000462955.1_01776	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	94.21	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP006706.1	1829652	1830380
GCA_000462955.1	GCA_000462955.1_01777	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	95.40	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP006706.1	1830415	1831134
GCA_000462955.1	GCA_000462955.1_01778	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	94.49	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP006706.1	1831417	1832181
GCA_000462955.1	GCA_000462955.1_01914	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.83	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP006706.1	1940537	1940917
GCA_000462955.1	GCA_000462955.1_01915	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.57	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP006706.1	1940907	1942664
GCA_000462955.1	GCA_000462955.1_01916	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP006706.1	1942771	1943616
GCA_000462955.1	GCA_000462955.1_01977	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	96.15	26	AGU62139.1	delta-hemolysin	NA	NA	CP006706.1	1995850	1995984
GCA_000462955.1	GCA_000462955.1_02130	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.92	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP006706.1	2151383	2152825
GCA_000462955.1	GCA_000462955.1_02397	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP006706.1	2396101	2397066
GCA_000462955.1	GCA_000462955.1_02398	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	95.87	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP006706.1	2397633	2398580
GCA_000462955.1	GCA_000462955.1_02399	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.23	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP006706.1	2398582	2399559
GCA_000462955.1	GCA_000462955.1_02533	sey	staphylococcal enterotoxin type Y	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	221	221	100.00	99.55	221	BAS21358.1	staphylococcal enterotoxin type Y	NA	NA	CP006706.1	2537515	2538180
GCA_000462955.1	GCA_000462955.1_02629	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.02	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP006706.1	2640187	2641716
GCA_000462955.1	GCA_000462955.1_02666	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP006706.1	2688362	2689414
GCA_009717115.1	GCA_009717115.1_00282	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMXX01000001.1	231782	232210
GCA_009717115.1	GCA_009717115.1_00287	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMXX01000001.1	234077	235540
GCA_009717115.1	GCA_009717115.1_00288	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMXX01000001.1	235660	236877
GCA_022075645.1	GCA_022075645.1_00921	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP038251.1	888227	889426
GCA_021398305.1	GCA_021398305.1_00052	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP071988.1	60639	61928
GCA_021398305.1	GCA_021398305.1_00158	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP071988.1	172163	172591
GCA_021398305.1	GCA_021398305.1_00209	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP071988.1	230187	231254
GCA_021398305.1	GCA_021398305.1_00266	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP071988.1	302824	303723
GCA_021398305.1	GCA_021398305.1_00267	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP071988.1	303822	305288
GCA_021398305.1	GCA_021398305.1_00281	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP071988.1	315873	316415
GCA_021398305.1	GCA_021398305.1_00282	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP071988.1	316508	317302
GCA_021398305.1	GCA_021398305.1_00886	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP071988.1	908460	909305
GCA_021398305.1	GCA_021398305.1_00887	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP071988.1	909412	911169
GCA_021398305.1	GCA_021398305.1_00888	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP071988.1	911159	911539
GCA_021398305.1	GCA_021398305.1_02407	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP071989.1	16417	16977
GCA_021398305.1	GCA_021398305.1_02408	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP071989.1	17161	18705
GCA_030176455.1	GCA_030176455.1_01883	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUE010000006.1	30105	30959
GCA_001500315.1	GCA_001500315.1_01927	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	LLER01000008.1	948	1343
GCA_001500315.1	GCA_001500315.1_01928	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.83	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LLER01000008.1	1361	2650
GCA_001500315.1	GCA_001500315.1_01929	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	105	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	LLER01000008.1	2647	2964
GCA_026782895.1	GCA_026782895.1_01145	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JAKUXJ010000004.1	272947	274146
GCA_026782895.1	GCA_026782895.1_01345	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAKUXJ010000004.1	454923	456386
GCA_026782895.1	GCA_026782895.1_01346	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAKUXJ010000004.1	456506	457723
GCA_026782895.1	GCA_026782895.1_01911	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAKUXJ010000007.1	121596	123515
GCA_026782895.1	GCA_026782895.1_01912	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAKUXJ010000007.1	124622	125359
GCA_027661045.1	GCA_027661045.1_01411	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQDMJ010000005.1	158755	159492
GCA_027661045.1	GCA_027661045.1_01412	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.22	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQDMJ010000005.1	160599	162518
GCA_007109275.1	GCA_007109275.1_01206	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.61	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	VKDI01000024.1	37391	38932
GCA_019879085.1	GCA_019879085.1_00057	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	213	221	95.02	68.57	210	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP082244.1	51818	52459
GCA_019879085.1	GCA_019879085.1_02536	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	260	259	99.61	41.76	261	WP_014386410.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	CP082244.1	2701238	2702020
GCA_019879085.1	GCA_019879085.1_02753	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	414	100.00	75.48	416	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP082244.1	2975063	2976304
GCA_019879085.1	GCA_019879085.1_02830	blaPOM	POM family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	286	286	100.00	99.65	286	WP_044403015.1	subclass B3 metallo-beta-lactamase POM-1	NF000438.2	POM family subclass B3 metallo-beta-lactamase	CP082244.1	3054430	3055290
GCA_003285265.1	GCA_003285265.1_02012	aac(3)-Ih	aminoglycoside N-acetyltransferase AAC(3)-Ih	plus	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	152	152	100.00	98.68	152	ABL71428.1	aminoglycoside N-acetyltransferase AAC(3)-Ih	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP030239.1	1662995	1663453
GCA_003425485.1	GCA_003425485.1_01542	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031684.1	1563850	1565244
GCA_007830715.1	GCA_007830715.1_02063	nimIJ	NimIJ family 5-nitroimidazole reductase	core	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	HMM	171	172	95.93	79.39	165	WP_021588763.1	NimIJ family 5-nitroimidazole reductase	NF000262.1	NimIJ family 5-nitroimidazole reductase	VLLM01000020.1	54757	55272
GCA_007830715.1	GCA_007830715.1_02212	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	VLLM01000023.1	22976	24901
GCA_025559885.1	GCA_025559885.1_00583	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	274	264	94.70	53.10	258	WP_032490761.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP048473.1	585941	586765
GCA_025559885.1	GCA_025559885.1_01951	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	150	146	94.52	58.70	138	WP_049270433.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP048473.1	1932930	1933382
GCA_025559885.1	GCA_025559885.1_02992	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	385	408	93.14	50.39	381	WP_322881141.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP048474.1	112463	113620
GCA_025559885.1	GCA_025559885.1_04699	catB1	type B-1 chloramphenicol O-acetyltransferase CatB1	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	211	209	99.04	95.65	207	WP_010974114.1	type B-1 chloramphenicol O-acetyltransferase CatB1	NF000490.1	type B chloramphenicol O-acetyltransferase	CP048474.1	2001750	2002385
GCA_013276525.1	GCA_013276525.1_01676	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMLE01000063.1	13886	15019
GCA_018996905.1	GCA_018996905.1_01388	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHNUR010000002.1	238711	239106
GCA_018996905.1	GCA_018996905.1_01389	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.90	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHNUR010000002.1	239124	240413
GCA_018996905.1	GCA_018996905.1_01390	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAHNUR010000002.1	240413	240727
GCA_018996905.1	GCA_018996905.1_01665	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHNUR010000003.1	192811	193191
GCA_018996905.1	GCA_018996905.1_01666	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.06	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHNUR010000003.1	193181	194938
GCA_018996905.1	GCA_018996905.1_01667	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHNUR010000003.1	195045	195890
GCA_018996905.1	GCA_018996905.1_01917	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHNUR010000005.1	2608	3009
GCA_018996905.1	GCA_018996905.1_01918	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.01	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHNUR010000005.1	3027	4316
GCA_018996905.1	GCA_018996905.1_02008	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.19	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHNUR010000005.1	86347	87639
GCA_023109295.1	GCA_023109295.1_00012	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALGPO010000011.1	1182	2399
GCA_023109295.1	GCA_023109295.1_00013	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALGPO010000011.1	2519	3982
GCA_023109295.1	GCA_023109295.1_00965	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JALGPO010000002.1	286966	287697
GCA_001837705.1	GCA_001837705.1_00574	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV833553.1	96435	97289
GCA_001837705.1	GCA_001837705.1_01546	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV833570.1	3527	5308
GCA_949788945.1	GCA_949788945.1_02027	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	OX460942.1	1925474	1927114
GCA_001812775.1	GCA_001812775.1_00737	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	639	92.80	98.65	593	WP_050618045.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV810420.1	2658	4445
GCA_001517935.1	GCA_001517935.1_00750	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.22	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	LOQF01000002.1	43177	44655
GCA_016126915.1	GCA_016126915.1_00357	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP065964.1	359865	361289
GCA_002763535.1	GCA_002763535.1_00014	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP024696.1	16531	17496
GCA_002763535.1	GCA_002763535.1_02403	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP024696.1	2717210	2719135
GCA_023509255.1	GCA_023509255.1_00254	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP091087.1	278841	280016
GCA_023509255.1	GCA_023509255.1_00258	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP091087.1	282436	283290
GCA_028399565.1	GCA_028399565.1_01236	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAQNVY010000022.1	39108	41033
GCA_028399565.1	GCA_028399565.1_01246	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JAQNVY010000022.1	50636	51451
GCA_028399565.1	GCA_028399565.1_01986	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	300	296	100.00	64.53	296	WP_005827792.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAQNVY010000034.1	20340	21242
GCA_028399565.1	GCA_028399565.1_02027	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	170	170	100.00	99.41	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JAQNVY010000036.1	4938	5450
GCA_028399565.1	GCA_028399565.1_02028	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JAQNVY010000036.1	5475	6680
GCA_030229195.1	GCA_030229195.1_00276	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPHD010000017.1	788	1639
GCA_030229195.1	GCA_030229195.1_00285	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPHD010000017.1	9521	10375
GCA_030229195.1	GCA_030229195.1_01139	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPHD010000020.1	2780	3955
GCA_012913645.1	GCA_012913645.1_01667	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	154	92.86	61.54	143	WP_015860243.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP051773.1	1700215	1700634
GCA_012913645.1	GCA_012913645.1_02171	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	263	266	97.74	57.69	260	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP051773.1	2233782	2234573
GCA_012913645.1	GCA_012913645.1_03468	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	275	269	96.28	53.96	265	WP_338424127.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP051773.1	3556307	3557134
GCA_001815745.1	GCA_001815745.1_00766	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV821810.1	16810	17664
GCA_001815745.1	GCA_001815745.1_01592	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV821821.1	58	1839
GCA_011714755.1	GCA_011714755.1_00550	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RXXN01000001.1	54983	56902
GCA_011714755.1	GCA_011714755.1_00587	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RXXN01000001.1	87768	89231
GCA_011714755.1	GCA_011714755.1_00588	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RXXN01000001.1	89252	90469
GCA_011714755.1	GCA_011714755.1_01528	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXN01000044.1	2174	3595
GCA_014334295.1	GCA_014334295.1_00158	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	97.18	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP060528.1	168954	169382
GCA_014334295.1	GCA_014334295.1_00208	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP060528.1	228109	229176
GCA_014334295.1	GCA_014334295.1_00884	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP060528.1	903135	903980
GCA_014334295.1	GCA_014334295.1_00885	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP060528.1	904087	905844
GCA_014334295.1	GCA_014334295.1_00886	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP060528.1	905834	906214
GCA_014334295.1	GCA_014334295.1_02241	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.65	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP060528.1	2258280	2259572
GCA_030176275.1	GCA_030176275.1_00210	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNTY010000013.1	248	1102
GCA_003943435.1	GCA_003943435.1_00293	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420317.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJPP01000001.1	281526	282989
GCA_003943435.1	GCA_003943435.1_00294	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.51	405	WP_000417517.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJPP01000001.1	283109	284326
GCA_030824905.1	GCA_030824905.1_02624	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAPJQY010000009.1	54904	55740
GCA_030824905.1	GCA_030824905.1_02625	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JAPJQY010000009.1	55740	56543
GCA_019703425.1	GCA_019703425.1_01583	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.77	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018767.1	1581962	1583356
GCA_009897275.1	GCA_009897275.1_00016	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	SHFC01000010.1	15479	16117
GCA_009897275.1	GCA_009897275.1_00363	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	SHFC01000018.1	6247	7791
GCA_009897275.1	GCA_009897275.1_00364	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	SHFC01000018.1	7975	8535
GCA_009897275.1	GCA_009897275.1_00823	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	522	522	100.00	100.00	522	WP_063856937.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	SHFC01000024.1	2166	3734
GCA_009897275.1	GCA_009897275.1_00828	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	522	522	100.00	100.00	522	WP_063856937.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	SHFC01000024.1	8421	9989
GCA_009897275.1	GCA_009897275.1_01083	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	SHFC01000002.1	259459	259839
GCA_009897275.1	GCA_009897275.1_01084	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	SHFC01000002.1	259829	261586
GCA_009897275.1	GCA_009897275.1_01085	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	SHFC01000002.1	261693	262538
GCA_009897275.1	GCA_009897275.1_01903	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	SHFC01000006.1	548	1840
GCA_009897275.1	GCA_009897275.1_01907	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	SHFC01000006.1	5523	5870
GCA_009897275.1	GCA_009897275.1_01955	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	SHFC01000006.1	54717	56009
GCA_009897275.1	GCA_009897275.1_02014	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	SHFC01000006.1	111539	111910
GCA_009897275.1	GCA_009897275.1_02015	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	SHFC01000006.1	111910	113667
GCA_009897275.1	GCA_009897275.1_02016	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	SHFC01000006.1	113767	115773
GCA_000211055.2	GCA_000211055.2_00934	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	371	371	100.00	100.00	371	EHE72460.1	multidrug efflux MFS transporter PmrA	NA	NA	FQ312044.2	873596	874711
GCA_019973675.1	GCA_019973675.1_01217	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP024093.1	1229750	1231144
GCA_002055685.1	GCA_002055685.1_01130	ant(2)-Ia	aminoglycoside nucleotidyltransferase ANT(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	192	177	100.00	100.00	177	WP_000381802.1	aminoglycoside nucleotidyltransferase ANT(2)-Ia	NF000064.3	aminoglycoside nucleotidyltransferase ANT(2)-Ia	CP020052.1	1197135	1197713
GCA_002055685.1	GCA_002055685.1_01131	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206356.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP020052.1	1197783	1198562
GCA_002055685.1	GCA_002055685.1_01132	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP020052.1	1198726	1199073
GCA_002055685.1	GCA_002055685.1_01133	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259018.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP020052.1	1199067	1199906
GCA_002055685.1	GCA_002055685.1_01136	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP020052.1	1202561	1203421
GCA_002055685.1	GCA_002055685.1_01139	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	189	144	100.00	93.75	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP020052.1	1207390	1207959
GCA_002055685.1	GCA_002055685.1_01145	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP020052.1	1216145	1216960
GCA_002055685.1	GCA_002055685.1_01148	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	94.44	144	AAC38229.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP020052.1	1218749	1219183
GCA_002055685.1	GCA_002055685.1_01150	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	548	561	100.00	85.38	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP020052.1	1220130	1221776
GCA_002055685.1	GCA_002055685.1_01151	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	98.35	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP020052.1	1221793	1222158
GCA_002055685.1	GCA_002055685.1_01217	dfrA1	trimethoprim-resistant dihydrofolate reductase DfrA1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	157	157	100.00	100.00	157	WP_000777554.1	trimethoprim-resistant dihydrofolate reductase DfrA1	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	CP020052.1	1299554	1300027
GCA_002055685.1	GCA_002055685.1_01218	sat2	streptothricin N-acetyltransferase Sat2	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	174	174	100.00	100.00	174	WP_000704156.1	streptothricin N-acetyltransferase Sat2	NF000358.1	streptothricin N-acetyltransferase Sat2	CP020052.1	1300122	1300646
GCA_002055685.1	GCA_002055685.1_01219	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001206315.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	CP020052.1	1300704	1301492
GCA_002055685.1	GCA_002055685.1_01834	tet(J)	tetracycline efflux MFS transporter Tet(J)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	398	398	100.00	99.25	398	WP_004245621.1	tetracycline efflux MFS transporter Tet(J)	NF012194.0	tetracycline efflux MFS transporter Tet(J)	CP020052.1	1980334	1981530
GCA_002055685.1	GCA_002055685.1_01845	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	194	194	100.00	99.48	194	AAD47284.1	tellurium resistance-associated protein TerZ	NA	NA	CP020052.1	1990774	1991358
GCA_002055685.1	GCA_002055685.1_01849	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	92.19	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP020052.1	1994127	1994705
GCA_002055685.1	GCA_002055685.1_03741	catA	type A-4 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	217	217	100.00	97.24	217	WP_063843208.1	type A-4 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP020052.1	3936054	3936707
GCA_019426405.1	GCA_019426405.1_00912	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAHLXQ010000021.1	6230	7669
GCA_019426405.1	GCA_019426405.1_00944	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAHLXQ010000024.1	8726	9049
GCA_019426405.1	GCA_019426405.1_01084	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	110	131	83.97	97.27	110	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHLXQ010000026.1	26361	26693
GCA_019426405.1	GCA_019426405.1_01085	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLXQ010000026.1	26711	28003
GCA_019426405.1	GCA_019426405.1_01166	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.55	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLXQ010000026.1	101183	102475
GCA_019426405.1	GCA_019426405.1_01858	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAHLXQ010000040.1	642	2108
GCA_019426405.1	GCA_019426405.1_01859	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAHLXQ010000040.1	2207	3106
GCA_019426405.1	GCA_019426405.1_01861	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAHLXQ010000040.1	4410	4976
GCA_019426405.1	GCA_019426405.1_01862	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAHLXQ010000040.1	5154	6698
GCA_019426405.1	GCA_019426405.1_01887	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	97.54	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	JAHLXQ010000043.1	2482	2850
GCA_019426405.1	GCA_019426405.1_01890	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	87	126	57.94	100.00	73	WP_001284656.1	penicillinase repressor BlaI	NA	NA	JAHLXQ010000043.1	4699	4962
GCA_019426405.1	GCA_019426405.1_01892	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAHLXQ010000044.1	1331	2710
GCA_003944245.1	GCA_003944245.1_00321	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.09	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	RJPM01000001.1	308345	309823
GCA_002096815.1	GCA_002096815.1_00442	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	NCVJ01000021.1	440517	441716
GCA_002096815.1	GCA_002096815.1_00618	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	NCVJ01000021.1	627719	629182
GCA_002096815.1	GCA_002096815.1_00619	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	NCVJ01000021.1	629302	630519
GCA_000243015.1	GCA_000243015.1_00041	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JH594500.1	71999	72964
GCA_006542725.1	GCA_006542725.1_01940	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	296	98.99	42.66	293	WP_005827792.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	AP019738.1	2260118	2261023
GCA_001697305.1	GCA_001697305.1_01001	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016627.1	1022868	1024394
GCA_001697305.1	GCA_001697305.1_01201	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016627.1	1234107	1235675
GCA_001697305.1	GCA_001697305.1_01203	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016627.1	1236500	1237132
GCA_001697305.1	GCA_001697305.1_01204	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016627.1	1237540	1238778
GCA_001697305.1	GCA_001697305.1_01330	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016627.1	1373169	1374074
GCA_001697305.1	GCA_001697305.1_02043	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016627.1	2115971	2117350
GCA_003252775.1	GCA_003252775.1_00438	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	QEPW01000003.1	50358	51218
GCA_000741775.1	GCA_000741775.1_01914	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	137	121	100.00	43.31	127	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JGZR01000010.1	13070	13483
GCA_009771115.1	GCA_009771115.1_00003	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_014636291.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	WNXW01000024.1	2367	4286
GCA_009771115.1	GCA_009771115.1_00720	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	329	405	81.23	100.00	329	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WNXW01000009.1	87393	88382
GCA_009771115.1	GCA_009771115.1_00721	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WNXW01000009.1	88502	89965
GCA_009771115.1	GCA_009771115.1_00874	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.43	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	WNXW01000021.1	7121	8599
GCA_028861895.1	GCA_028861895.1_00153	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	229	232	99.14	66.96	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	JAQSVD010000001.1	132886	133575
GCA_028861895.1	GCA_028861895.1_00249	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	98.01	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	JAQSVD010000001.1	237228	239342
GCA_028861895.1	GCA_028861895.1_02658	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	588	585	99.83	32.49	594	WP_000952923.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	JAQSVD010000007.1	8994	10760
GCA_028861895.1	GCA_028861895.1_03376	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	128	121	100.00	48.06	129	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQSVD010000010.1	147253	147639
GCA_028861895.1	GCA_028861895.1_03605	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAQSVD010000012.1	41759	43678
GCA_016651435.1	GCA_016651435.1_00193	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.46	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAEPRJ010000001.1	234084	235562
GCA_029369765.1	GCA_029369765.1_00633	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.56	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP120351.1	742208	743089
GCA_029369765.1	GCA_029369765.1_02394	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	98.77	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	CP120351.1	3084085	3084819
GCA_029369765.1	GCA_029369765.1_02527	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP120351.1	3269224	3270039
GCA_029369765.1	GCA_029369765.1_04505	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP120351.1	5568954	5570879
GCA_029369765.1	GCA_029369765.1_05108	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.33	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP120351.1	6238838	6240169
GCA_013391365.1	GCA_013391365.1_00026	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	JACAWZ010000001.1	29086	29322
GCA_013391365.1	GCA_013391365.1_00027	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	JACAWZ010000001.1	29319	29684
GCA_013391365.1	GCA_013391365.1_00028	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACAWZ010000001.1	29702	31387
GCA_013391365.1	GCA_013391365.1_00029	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JACAWZ010000001.1	31459	31734
GCA_013391365.1	GCA_013391365.1_00030	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	JACAWZ010000001.1	31747	32097
GCA_013391365.1	GCA_013391365.1_00031	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	JACAWZ010000001.1	32169	32603
GCA_013391365.1	GCA_013391365.1_00057	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	50.55	91	BAA20336.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JACAWZ010000001.1	55311	55586
GCA_013391365.1	GCA_013391365.1_03458	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	147	144	95.14	40.29	139	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	JACAWZ010000005.1	1792582	1793025
GCA_013391365.1	GCA_013391365.1_03816	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	66.91	136	WP_003082280.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	JACAWZ010000007.1	138911	139321
GCA_013391365.1	GCA_013391365.1_04389	blaOXA	OXA-22 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	275	275	100.00	98.55	275	WP_154205474.1	OXA-22 family class D beta-lactamase OXA-899	NF033509.1	OXA-22 family class D beta-lactamase	JACAWZ010000008.1	511611	512438
GCA_013391365.1	GCA_013391365.1_04571	blaOXA	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	271	271	99.63	98.52	270	WP_154205589.1	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase OXA-898	NF000395.3	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	JACAWZ010000008.1	711203	712018
GCA_003474535.1	GCA_003474535.1_01656	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	QROD01000026.1	259	771
GCA_003474535.1	GCA_003474535.1_01657	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	QROD01000026.1	796	2001
GCA_003474535.1	GCA_003474535.1_01781	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	QROD01000003.1	19776	21701
GCA_003474535.1	GCA_003474535.1_01791	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_063844771.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	QROD01000003.1	35697	36497
GCA_003474535.1	GCA_003474535.1_02125	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	QROD01000038.1	39	1004
GCA_003474535.1	GCA_003474535.1_03251	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	297	300	95.33	50.00	288	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	QROD01000009.1	123670	124563
GCA_002861365.1	GCA_002861365.1_00269	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	PKHQ01000001.1	289261	289707
GCA_002861365.1	GCA_002861365.1_00284	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PKHQ01000001.1	296900	298321
GCA_002861365.1	GCA_002861365.1_00288	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	PKHQ01000001.1	300049	300903
GCA_020736445.1	GCA_020736445.1_01261	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP086002.1	1354997	1355851
GCA_020736445.1	GCA_020736445.1_01270	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP086002.1	1361932	1363107
GCA_020736445.1	GCA_020736445.1_01302	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP086002.1	1388123	1389298
GCA_000147675.2	GCA_000147675.2_01419	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	87.60	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	ADGQ01000026.1	4797	6275
GCA_001193755.1	GCA_001193755.1_00457	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CQZX01000004.1	37303	39222
GCA_001193755.1	GCA_001193755.1_01250	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CQZX01000021.1	10429	11562
GCA_022693225.1	GCA_022693225.1_00083	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP092581.1	98324	99682
GCA_022693225.1	GCA_022693225.1_00282	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP092581.1	327110	328465
GCA_022693225.1	GCA_022693225.1_00320	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP092581.1	361774	362385
GCA_022693225.1	GCA_022693225.1_01695	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092581.1	1786702	1787994
GCA_022693225.1	GCA_022693225.1_01734	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	CP092581.1	1819127	1819849
GCA_022693225.1	GCA_022693225.1_01735	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP092581.1	1819974	1820681
GCA_022693225.1	GCA_022693225.1_01740	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP092581.1	1824815	1825798
GCA_022693225.1	GCA_022693225.1_01741	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP092581.1	1825800	1826735
GCA_022693225.1	GCA_022693225.1_01749	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	145	272	52.21	99.30	142	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP092581.1	1832998	1833435
GCA_022693225.1	GCA_022693225.1_01750	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP092581.1	1833730	1834125
GCA_022693225.1	GCA_022693225.1_01752	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP092581.1	1834655	1835383
GCA_022693225.1	GCA_022693225.1_01753	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP092581.1	1835418	1836137
GCA_022693225.1	GCA_022693225.1_01754	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP092581.1	1836418	1837182
GCA_022693225.1	GCA_022693225.1_02017	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP092581.1	2034664	2034798
GCA_022693225.1	GCA_022693225.1_02164	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	98.96	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP092581.1	2187792	2189234
GCA_022693225.1	GCA_022693225.1_02336	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP092581.1	2339699	2340118
GCA_022693225.1	GCA_022693225.1_02421	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP092581.1	2428511	2429476
GCA_022693225.1	GCA_022693225.1_02422	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP092581.1	2430043	2430990
GCA_022693225.1	GCA_022693225.1_02423	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP092581.1	2430992	2431969
GCA_022693225.1	GCA_022693225.1_02604	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP092581.1	2614081	2614875
GCA_022693225.1	GCA_022693225.1_02605	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	176	180	100.00	97.78	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP092581.1	2614968	2615498
GCA_022693225.1	GCA_022693225.1_02619	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP092581.1	2626291	2627757
GCA_022693225.1	GCA_022693225.1_02620	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	BLASTP	299	299	100.00	99.67	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP092581.1	2627856	2628755
GCA_022693225.1	GCA_022693225.1_02622	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	97.54	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP092581.1	2630120	2630488
GCA_022693225.1	GCA_022693225.1_02631	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	PARTIALP	105	180	50.56	100.00	91	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NA	NA	CP092581.1	2637094	2637411
GCA_022693225.1	GCA_022693225.1_02632	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	BLASTP	253	264	93.18	94.31	246	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP092581.1	2637718	2638479
GCA_022693225.1	GCA_022693225.1_02639	tet(S)	tetracycline resistance ribosomal protection protein Tet(S)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_000691722.1	tetracycline resistance ribosomal protection protein Tet(S)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP092581.1	2645097	2647022
GCA_022693225.1	GCA_022693225.1_02681	vanR-A	vancomycin resistance response regulator transcription factor VanR-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	231	231	100.00	100.00	231	WP_001280781.1	vancomycin resistance response regulator transcription factor VanR-A	NF000401.1	vancomycin resistance response regulator transcription factor VanR-A	CP092581.1	2679333	2680028
GCA_022693225.1	GCA_022693225.1_02682	vanS-A	vancomycin resistance histidine kinase VanS-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	380	384	98.96	99.74	380	WP_002305818.1	vancomycin resistance histidine kinase VanS-A	NF033091.0	vancomycin resistance histidine kinase VanS	CP092581.1	2680018	2681160
GCA_022693225.1	GCA_022693225.1_02684	vanH-A	D-lactate dehydrogenase VanH-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	322	322	100.00	100.00	322	WP_001059542.1	D-lactate dehydrogenase VanH-A	NF000371.1	VanH-A/VanH-Pt family D-lactate dehydrogenase	CP092581.1	2682882	2683850
GCA_022693225.1	GCA_022693225.1_02685	vanA	D-alanine--(R)-lactate ligase VanA	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	343	343	100.00	99.71	343	WP_001079845.1	D-alanine--(R)-lactate ligase VanA	NF012217.1	D-alanine--(R)-lactate ligase VanA	CP092581.1	2683843	2684874
GCA_022693225.1	GCA_022693225.1_02686	vanX-A	D-Ala-D-Ala dipeptidase VanX-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	202	202	100.00	100.00	202	WP_000402348.1	D-Ala-D-Ala dipeptidase VanX-A	NF033115.1	D-Ala-D-Ala dipeptidase VanX	CP092581.1	2684880	2685488
GCA_022693225.1	GCA_022693225.1_02687	vanY-A	D-Ala-D-Ala carboxypeptidase VanY-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	303	303	100.00	99.67	303	WP_001812592.1	D-Ala-D-Ala carboxypeptidase VanY-A	NF000472.1	VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase	CP092581.1	2685916	2686827
GCA_022693225.1	GCA_022693225.1_02688	vanZ-A	glycopeptide resistance protein VanZ-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	161	161	100.00	100.00	161	WP_000516404.1	glycopeptide resistance protein VanZ-A	NF033125.2	glycopeptide resistance protein VanZ-A	CP092581.1	2686980	2687465
GCA_022693225.1	GCA_022693225.1_02718	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038792.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP092581.1	2710738	2711475
GCA_022693225.1	GCA_022693225.1_02724	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP092581.1	2714734	2715642
GCA_022693225.1	GCA_022693225.1_02725	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	176	180	100.00	97.78	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP092581.1	2715639	2716169
GCA_022693225.1	GCA_022693225.1_02726	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP092581.1	2716262	2717056
GCA_022693225.1	GCA_022693225.1_02790	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP092581.1	2785252	2786781
GCA_022693225.1	GCA_022693225.1_02824	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP092581.1	2830015	2831067
GCA_022693225.1	GCA_022693225.1_02876	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP092582.1	4269	4886
GCA_022693225.1	GCA_022693225.1_02881	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733287.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP092582.1	7713	8558
GCA_022693225.1	GCA_022693225.1_02882	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP092582.1	8665	10422
GCA_022693225.1	GCA_022693225.1_02883	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP092582.1	10412	10792
GCA_022693225.1	GCA_022693225.1_02887	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP092582.1	13875	14189
GCA_022693225.1	GCA_022693225.1_02888	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.77	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092582.1	14189	15478
GCA_022693225.1	GCA_022693225.1_02889	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP092582.1	15496	15891
GCA_030644365.1	GCA_030644365.1_00846	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP130058.1	1028134	1030053
GCA_001553395.1	GCA_001553395.1_00436	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KQ960892.1	177198	179117
GCA_030176635.1	GCA_030176635.1_01089	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASNVL010000003.1	70126	71301
GCA_022346365.1	GCA_022346365.1_01017	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.06	47.05	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRMN010000002.1	225351	226775
GCA_022346365.1	GCA_022346365.1_01019	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	393	391	99.74	63.36	393	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	JAKRMN010000002.1	227601	228782
GCA_022346365.1	GCA_022346365.1_01029	tet(33)	tetracycline efflux MFS transporter Tet(33)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	419	407	100.00	98.28	407	WP_109545038.1	tetracycline efflux MFS transporter Tet(33)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	JAKRMN010000002.1	237050	238309
GCA_022346365.1	GCA_022346365.1_01035	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	391	99.49	62.72	389	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	JAKRMN010000002.1	243533	244708
GCA_022346365.1	GCA_022346365.1_01482	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRMN010000004.1	167112	168533
GCA_022346365.1	GCA_022346365.1_01989	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	275	284	100.00	57.75	284	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRMN010000006.1	166163	166990
GCA_000759055.1	GCA_000759055.1_00487	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JRNG01000006.1	93840	94694
GCA_000759055.1	GCA_000759055.1_02107	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.26	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JRNG01000068.1	955	2379
GCA_029023825.1	GCA_029023825.1_00227	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	138	143	93.01	54.89	133	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP118957.1	202847	203263
GCA_029023825.1	GCA_029023825.1_00924	vanS	vancomycin resistance histidine kinase VanS	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	374	376	96.81	56.99	365	WP_034869172.1	vancomycin resistance histidine kinase VanS	NF033091.0	vancomycin resistance histidine kinase VanS	CP118957.1	849851	850975
GCA_029023825.1	GCA_029023825.1_02074	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	219	99.09	52.07	217	WP_063843219.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP118957.1	1963446	1964093
GCA_029023825.1	GCA_029023825.1_02288	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	496	500	99.40	66.53	502	WP_002296175.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP118957.1	2183429	2184919
GCA_000953455.1	GCA_000953455.1_01377	tmexD	multidrug efflux RND transporter permease subunit TMexD	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	1044	1044	100.00	96.36	1044	WP_027591160.1	multidrug efflux RND transporter permease subunit TMexD2	NA	NA	LK391695.1	1421675	1424809
GCA_000953455.1	GCA_000953455.1_01707	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.57	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	LK391695.1	1735056	1737905
GCA_000953455.1	GCA_000953455.1_02136	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	412	414	100.00	74.88	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	LK391695.1	2185768	2187006
GCA_000953455.1	GCA_000953455.1_03927	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	49.45	91	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	LK391695.1	3932633	3932908
GCA_000953455.1	GCA_000953455.1_04696	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	94.44	144	AAC38229.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	LK391695.1	4656724	4657158
GCA_000953455.1	GCA_000953455.1_04697	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	AAA98222.1	mercuric transport protein MerT	NA	NA	LK391695.1	4657230	4657580
GCA_000953455.1	GCA_000953455.1_04698	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	98.90	93.33	90	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	LK391695.1	4657596	4657871
GCA_000953455.1	GCA_000953455.1_04699	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	81	81	100.00	100.00	81	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	LK391695.1	4657874	4658119
GCA_000953455.1	GCA_000953455.1_04700	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	548	561	100.00	85.20	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LK391695.1	4658116	4659762
GCA_000953455.1	GCA_000953455.1_04701	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	98.35	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	LK391695.1	4659779	4660144
GCA_000953455.1	GCA_000953455.1_04702	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	LK391695.1	4660141	4660377
GCA_002386345.1	GCA_002386345.1_00124	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP023507.1	115326	117221
GCA_002386345.1	GCA_002386345.1_00932	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP023507.1	938564	940027
GCA_002386345.1	GCA_002386345.1_00933	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP023507.1	940147	941364
GCA_031158355.1	GCA_031158355.1_00479	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAVIFC010000013.1	2040	2450
GCA_023149075.1	GCA_023149075.1_02032	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHXMV010000003.1	287414	288706
GCA_023149075.1	GCA_023149075.1_02591	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHXMV010000008.1	31274	31654
GCA_023149075.1	GCA_023149075.1_02592	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHXMV010000008.1	31644	33401
GCA_023149075.1	GCA_023149075.1_02593	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHXMV010000008.1	33508	34353
GCA_018829685.1	GCA_018829685.1_00744	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.34	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JAHKKB010000001.1	786054	787448
GCA_018829685.1	GCA_018829685.1_01822	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_002244796.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	JAHKKB010000008.1	1407	2612
GCA_013009675.1	GCA_013009675.1_00411	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.55	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP046424.1	502262	504187
GCA_013009675.1	GCA_013009675.1_00736	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP046424.1	847938	849863
GCA_013009675.1	GCA_013009675.1_02376	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	90.67	52.94	272	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP046424.1	2811711	2812670
GCA_013009675.1	GCA_013009675.1_04309	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	PARTIALP	191	266	69.55	99.46	185	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NA	NA	CP046424.1	5126841	5127416
GCA_902387945.1	GCA_902387945.1_01150	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	78.66	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	LR699010.1	1255561	1257039
GCA_000836095.1	GCA_000836095.1_00190	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	BBSQ01000057.1	10171	10407
GCA_000836095.1	GCA_000836095.1_00191	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	BBSQ01000057.1	10404	10769
GCA_000836095.1	GCA_000836095.1_00192	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	97.50	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BBSQ01000057.1	10787	12472
GCA_000836095.1	GCA_000836095.1_00193	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	BBSQ01000057.1	12511	12936
GCA_000836095.1	GCA_000836095.1_00194	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	84.62	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	BBSQ01000057.1	12964	13239
GCA_000836095.1	GCA_000836095.1_00195	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	94.83	116	CAA70196.1	mercuric transport protein MerT	NA	NA	BBSQ01000057.1	13253	13603
GCA_000836095.1	GCA_000836095.1_00196	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.25	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	BBSQ01000057.1	13675	14130
GCA_000836095.1	GCA_000836095.1_00368	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.57	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	BBSQ01000046.1	280	3129
GCA_000836095.1	GCA_000836095.1_00369	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	94.92	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	BBSQ01000046.1	3339	4226
GCA_000836095.1	GCA_000836095.1_00370	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	95.07	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	BBSQ01000046.1	4323	4934
GCA_000836095.1	GCA_000836095.1_00947	blaOXA-283	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	276	276	100.00	100.00	276	WP_004647119.1	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	NF000436.2	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	BBSQ01000027.1	7230	8060
GCA_000836095.1	GCA_000836095.1_03048	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	97.23	76.68	386	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	BBSQ01000002.1	92920	94140
GCA_009650155.1	GCA_009650155.1_01004	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP045866.1	1055744	1057036
GCA_009650155.1	GCA_009650155.1_01043	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	CP045866.1	1088170	1088892
GCA_009650155.1	GCA_009650155.1_01044	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP045866.1	1089017	1089724
GCA_009650155.1	GCA_009650155.1_01049	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP045866.1	1093855	1094838
GCA_009650155.1	GCA_009650155.1_01050	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP045866.1	1094840	1095760
GCA_009650155.1	GCA_009650155.1_01058	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	99.60	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP045866.1	1101976	1102731
GCA_009650155.1	GCA_009650155.1_01059	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP045866.1	1102770	1103165
GCA_009650155.1	GCA_009650155.1_01061	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP045866.1	1103695	1104423
GCA_009650155.1	GCA_009650155.1_01062	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP045866.1	1104458	1105177
GCA_009650155.1	GCA_009650155.1_01063	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP045866.1	1105458	1106222
GCA_009650155.1	GCA_009650155.1_01220	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP045866.1	1231130	1231480
GCA_009650155.1	GCA_009650155.1_01224	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	CP045866.1	1232977	1233468
GCA_009650155.1	GCA_009650155.1_01301	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP045866.1	1286891	1287025
GCA_009650155.1	GCA_009650155.1_01444	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP045866.1	1437227	1438669
GCA_009650155.1	GCA_009650155.1_01615	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP045866.1	1589016	1589435
GCA_009650155.1	GCA_009650155.1_01699	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP045866.1	1677768	1678733
GCA_009650155.1	GCA_009650155.1_01700	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP045866.1	1679300	1680247
GCA_009650155.1	GCA_009650155.1_01701	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP045866.1	1680249	1681226
GCA_009650155.1	GCA_009650155.1_01778	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1371	1115	61.43	99.85	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP045866.1	1759593	1763708
GCA_009650155.1	GCA_009650155.1_01924	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP045866.1	1919600	1921129
GCA_009650155.1	GCA_009650155.1_01958	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP045866.1	1964315	1965367
GCA_009650155.1	GCA_009650155.1_02084	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP045866.1	2104818	2106176
GCA_009650155.1	GCA_009650155.1_02279	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP045866.1	2332213	2333568
GCA_009650155.1	GCA_009650155.1_02316	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP045866.1	2366876	2367487
GCA_009650155.1	GCA_009650155.1_02674	ser	staphylococcal enterotoxin type R	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	212	259	81.85	100.00	212	EVY93839.1	staphylococcal enterotoxin type R	NA	NA	CP045867.1	1583	2221
GCA_009650155.1	GCA_009650155.1_02675	sej	staphylococcal enterotoxin type J	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	268	268	100.00	100.00	268	AAC78590.1	staphylococcal enterotoxin type J	NA	NA	CP045867.1	2311	3117
GCA_009650155.1	GCA_009650155.1_02678	sed	staphylococcal enterotoxin type D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	258	258	100.00	99.61	258	AAB06195.1	staphylococcal enterotoxin type D	NA	NA	CP045867.1	4013	4789
GCA_009650155.1	GCA_009650155.1_02684	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP045867.1	10444	11061
GCA_009650155.1	GCA_009650155.1_02696	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP045867.1	21635	22480
GCA_009650155.1	GCA_009650155.1_02697	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP045867.1	22587	24344
GCA_009650155.1	GCA_009650155.1_02698	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP045867.1	24334	24714
GCA_003942265.1	GCA_003942265.1_00674	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJMP01000002.1	299943	301160
GCA_003942265.1	GCA_003942265.1_00675	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJMP01000002.1	301280	302743
GCA_000786505.1	GCA_000786505.1_00283	aac(2)-Ic	aminoglycoside N-acetyltransferase AAC(2)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	181	181	100.00	100.00	181	WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	NF000034.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	HG813240.1	312576	313121
GCA_000786505.1	GCA_000786505.1_02091	erm(37)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	150	179	83.80	99.33	150	WP_003900446.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	NA	NA	HG813240.1	2222563	2223015
GCA_000786505.1	GCA_000786505.1_02184	blaC	class A beta-lactamase BlaC	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	307	307	100.00	100.00	307	WP_003410677.1	class A beta-lactamase BlaC	NF041154.1	class A beta-lactamase BlaC	HG813240.1	2323038	2323961
GCA_002775055.1	GCA_002775055.1_00042	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	LTBF01000002.1	11005	11820
GCA_002775055.1	GCA_002775055.1_00045	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	LTBF01000002.1	13499	13918
GCA_002775055.1	GCA_002775055.1_00046	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	LTBF01000002.1	13918	14754
GCA_002775055.1	GCA_002775055.1_00489	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LTBF01000005.1	99950	101392
GCA_002775055.1	GCA_002775055.1_00501	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	LTBF01000006.1	4689	5864
GCA_002775055.1	GCA_002775055.1_00581	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	LTBF01000007.1	22499	24280
GCA_002775055.1	GCA_002775055.1_01953	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.61	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	LTBF01000025.1	230890	232431
GCA_002775055.1	GCA_002775055.1_02246	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	322	593	54.30	100.00	322	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	LTBF01000032.1	2963	3931
GCA_001679125.1	GCA_001679125.1_00277	blaBRO-2	class A beta-lactamase BRO-2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003665544.1	class A beta-lactamase BRO-2	NF033103.1	class A beta-lactamase	LZDM01000003.1	54108	55049
GCA_001839505.1	GCA_001839505.1_00831	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV841551.1	169335	171254
GCA_001839505.1	GCA_001839505.1_00944	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV841553.1	62894	64111
GCA_001839505.1	GCA_001839505.1_00945	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV841553.1	64231	65694
GCA_013276705.1	GCA_013276705.1_00831	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMLN01000029.1	42864	44783
GCA_013276705.1	GCA_013276705.1_00842	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	VMLN01000029.1	54701	55438
GCA_013276705.1	GCA_013276705.1_02019	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMLN01000071.1	55	1188
GCA_002096455.1	GCA_002096455.1_00682	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	NCUL01000008.1	694973	696190
GCA_002096455.1	GCA_002096455.1_00683	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	NCUL01000008.1	696310	697773
GCA_014266525.1	GCA_014266525.1_00131	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMVH010000013.1	16606	18150
GCA_014266525.1	GCA_014266525.1_00132	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMVH010000013.1	18334	18894
GCA_014266525.1	GCA_014266525.1_00196	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVH010000017.1	495	1787
GCA_014266525.1	GCA_014266525.1_00200	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMVH010000017.1	5470	5817
GCA_014266525.1	GCA_014266525.1_00210	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMVH010000018.1	2463	2867
GCA_014266525.1	GCA_014266525.1_00211	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMVH010000018.1	3084	3827
GCA_014266525.1	GCA_014266525.1_00212	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMVH010000019.1	421	1155
GCA_014266525.1	GCA_014266525.1_00673	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMVH010000003.1	38825	40465
GCA_014266525.1	GCA_014266525.1_00731	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMVH010000003.1	99517	99888
GCA_014266525.1	GCA_014266525.1_00732	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMVH010000003.1	99888	101645
GCA_014266525.1	GCA_014266525.1_00733	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMVH010000003.1	101745	103751
GCA_014266525.1	GCA_014266525.1_00993	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVH010000006.1	41988	43280
GCA_014266525.1	GCA_014266525.1_01052	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMVH010000007.1	10298	10678
GCA_014266525.1	GCA_014266525.1_01053	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMVH010000007.1	10668	12425
GCA_014266525.1	GCA_014266525.1_01054	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMVH010000007.1	12532	13377
GCA_003355195.1	GCA_003355195.1_00455	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP031325.1	479073	479978
GCA_003355195.1	GCA_003355195.1_00594	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP031325.1	641629	642867
GCA_003355195.1	GCA_003355195.1_00595	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP031325.1	642884	643747
GCA_003355195.1	GCA_003355195.1_01256	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP031325.1	1297492	1299018
GCA_003355195.1	GCA_003355195.1_01745	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP031325.1	1768368	1769747
GCA_002763715.1	GCA_002763715.1_01757	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP024728.1	25206	26171
GCA_002763715.1	GCA_002763715.1_02390	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP024728.1	749851	750651
GCA_026660155.1	GCA_026660155.1_01794	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JANSKW010000006.1	123306	124151
GCA_026660155.1	GCA_026660155.1_01795	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.49	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JANSKW010000006.1	124258	126015
GCA_026660155.1	GCA_026660155.1_01796	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JANSKW010000006.1	126005	126385
GCA_026660155.1	GCA_026660155.1_01803	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JANSKW010000006.1	131413	132702
GCA_026660155.1	GCA_026660155.1_01808	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANSKW010000006.1	136109	136456
GCA_026660155.1	GCA_026660155.1_02054	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	52.01	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JANSKW010000009.1	155043	156095
GCA_022404775.1	GCA_022404775.1_00022	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP062342.1	20431	20922
GCA_022404775.1	GCA_022404775.1_00027	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP062342.1	24187	24537
GCA_022404775.1	GCA_022404775.1_00182	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.36	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP062342.1	151199	152134
GCA_022404775.1	GCA_022404775.1_00183	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP062342.1	152136	153119
GCA_022404775.1	GCA_022404775.1_00188	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.45	235	ABD31004.1	serine protease SplA	NA	NA	CP062342.1	157246	157953
GCA_022404775.1	GCA_022404775.1_00189	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP062342.1	158078	158800
GCA_022404775.1	GCA_022404775.1_00192	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	99.16	238	ABD30999.1	serine protease SplE	NA	NA	CP062342.1	160575	161291
GCA_022404775.1	GCA_022404775.1_00234	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP062342.1	193807	195099
GCA_022404775.1	GCA_022404775.1_01719	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.33	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP062342.1	1705567	1706922
GCA_022404775.1	GCA_022404775.1_01912	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP062342.1	1930309	1931667
GCA_022404775.1	GCA_022404775.1_02032	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	98.73	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP062342.1	2060497	2064048
GCA_022404775.1	GCA_022404775.1_02056	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP062342.1	2084828	2085880
GCA_022404775.1	GCA_022404775.1_02090	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP062342.1	2129071	2130600
GCA_022404775.1	GCA_022404775.1_02302	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP062342.1	2359475	2360452
GCA_022404775.1	GCA_022404775.1_02303	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP062342.1	2360454	2361401
GCA_022404775.1	GCA_022404775.1_02304	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP062342.1	2361968	2362933
GCA_022404775.1	GCA_022404775.1_02556	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	PARTIALP	366	480	73.54	99.15	353	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP062342.1	2595287	2596387
GCA_022404775.1	GCA_022404775.1_02702	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP062342.1	2747111	2747245
GCA_022404775.1	GCA_022404775.1_02760	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	99.51	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP062343.1	2316	2933
GCA_022404775.1	GCA_022404775.1_02768	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP062343.1	7937	8317
GCA_022404775.1	GCA_022404775.1_02769	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.56	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP062343.1	8307	10064
GCA_022404775.1	GCA_022404775.1_02770	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733289.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP062343.1	10171	11016
GCA_017306455.1	GCA_017306455.1_00455	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	140	137	88.32	49.60	125	WP_012695486.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	JAFKIH010000008.1	124504	124926
GCA_001298325.2	GCA_001298325.2_00073	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP019945.1	72330	74336
GCA_001298325.2	GCA_001298325.2_00120	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP019945.1	123133	123513
GCA_001298325.2	GCA_001298325.2_00121	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP019945.1	123503	125260
GCA_001298325.2	GCA_001298325.2_00122	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP019945.1	125367	126212
GCA_001298325.2	GCA_001298325.2_00127	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP019945.1	129413	130852
GCA_001298325.2	GCA_001298325.2_00138	lnu(B)	lincosamide nucleotidyltransferase Lnu(B)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	267	267	100.00	100.00	267	WP_002294514.1	lincosamide nucleotidyltransferase Lnu(B)	NF000235.3	lincosamide nucleotidyltransferase Lnu(B)	CP019945.1	138793	139596
GCA_001298325.2	GCA_001298325.2_00139	lsa(E)	ABC-F type ribosomal protection protein Lsa(E)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	EXACTP	494	494	100.00	100.00	494	WP_002294513.1	ABC-F type ribosomal protection protein Lsa(E)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP019945.1	139650	141134
GCA_001298325.2	GCA_001298325.2_00143	spw	ANT(9) family aminoglycoside nucleotidyltransferase Spw	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	269	269	100.00	100.00	269	WP_002294509.1	ANT(9) family aminoglycoside nucleotidyltransferase Spw	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP019945.1	143201	144010
GCA_001298325.2	GCA_001298325.2_00145	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_002294505.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP019945.1	144713	145576
GCA_001298325.2	GCA_001298325.2_00150	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP019945.1	149034	149348
GCA_001298325.2	GCA_001298325.2_00151	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	429	429	100.00	100.00	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP019945.1	149348	150637
GCA_001298325.2	GCA_001298325.2_00152	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP019945.1	150655	151050
GCA_001298325.2	GCA_001298325.2_00180	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP019945.1	182126	183484
GCA_001298325.2	GCA_001298325.2_00383	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.56	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP019945.1	412837	414192
GCA_001298325.2	GCA_001298325.2_00421	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	95.07	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP019945.1	447315	447926
GCA_001298325.2	GCA_001298325.2_01749	fexA	chloramphenicol/florfenicol efflux MFS transporter FexA	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	475	475	100.00	99.37	475	WP_015585966.1	chloramphenicol/florfenicol efflux MFS transporter FexA	NF000218.1	chloramphenicol/florfenicol efflux MFS transporter FexA	CP019945.1	1772276	1773703
GCA_001298325.2	GCA_001298325.2_01876	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP019945.1	1920186	1921478
GCA_001298325.2	GCA_001298325.2_01903	sel28	staphylococcal enterotoxin type 28	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	256	241	100.00	98.76	241	NDR16747.1	staphylococcal enterotoxin type 28	NA	NA	CP019945.1	1942179	1942949
GCA_001298325.2	GCA_001298325.2_01904	sel27	staphylococcal enterotoxin type 27	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.00	250	NDR16746.1	staphylococcal enterotoxin type 27	NA	NA	CP019945.1	1942976	1943728
GCA_001298325.2	GCA_001298325.2_01927	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	99.60	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP019945.1	1964790	1965545
GCA_001298325.2	GCA_001298325.2_01928	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	256	261	100.00	94.25	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP019945.1	1965584	1966354
GCA_001298325.2	GCA_001298325.2_01929	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP019945.1	1966508	1967236
GCA_001298325.2	GCA_001298325.2_01930	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP019945.1	1967271	1967990
GCA_001298325.2	GCA_001298325.2_01931	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	99.61	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP019945.1	1968271	1969035
GCA_001298325.2	GCA_001298325.2_02138	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP019945.1	2124735	2125115
GCA_001298325.2	GCA_001298325.2_02139	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.89	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP019945.1	2125105	2126862
GCA_001298325.2	GCA_001298325.2_02140	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP019945.1	2126969	2127814
GCA_001298325.2	GCA_001298325.2_02179	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP019945.1	2166647	2166781
GCA_001298325.2	GCA_001298325.2_02328	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.38	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP019945.1	2319830	2321272
GCA_001298325.2	GCA_001298325.2_02494	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP019945.1	2463804	2464223
GCA_001298325.2	GCA_001298325.2_02531	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP019945.1	2503092	2503589
GCA_001298325.2	GCA_001298325.2_02583	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP019945.1	2557697	2558662
GCA_001298325.2	GCA_001298325.2_02584	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP019945.1	2559230	2560177
GCA_001298325.2	GCA_001298325.2_02585	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP019945.1	2560179	2561156
GCA_001298325.2	GCA_001298325.2_02710	sey	staphylococcal enterotoxin type Y	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	221	221	100.00	99.10	221	BAS21358.1	staphylococcal enterotoxin type Y	NA	NA	CP019945.1	2690304	2690969
GCA_001298325.2	GCA_001298325.2_02778	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.13	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	CP019945.1	2761533	2762966
GCA_001298325.2	GCA_001298325.2_02810	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP019945.1	2798446	2799975
GCA_001298325.2	GCA_001298325.2_02845	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP019945.1	2844149	2845201
GCA_008586785.1	GCA_008586785.1_02084	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.63	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP043810.1	1863832	1865226
GCA_000234015.1	GCA_000234015.1_00150	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	JH376743.1	130932	131972
GCA_025677785.1	GCA_025677785.1_00539	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	643	639	99.84	99.69	638	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP106884.1	551530	553461
GCA_025677785.1	GCA_025677785.1_00545	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_001829870.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CP106884.1	559028	559513
GCA_002073675.2	GCA_002073675.2_00948	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.21	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP020423.2	974349	975875
GCA_002073675.2	GCA_002073675.2_01128	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP020423.2	1173519	1175087
GCA_002073675.2	GCA_002073675.2_01130	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.10	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP020423.2	1175726	1176358
GCA_002073675.2	GCA_002073675.2_01131	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.82	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP020423.2	1176761	1177999
GCA_002073675.2	GCA_002073675.2_01257	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP020423.2	1315201	1316106
GCA_002073675.2	GCA_002073675.2_02085	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP020423.2	2148144	2149523
GCA_003425935.1	GCA_003425935.1_01600	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031687.1	1598260	1599654
GCA_003944155.1	GCA_003944155.1_00065	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJPE01000001.1	63543	65006
GCA_003944155.1	GCA_003944155.1_00066	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJPE01000001.1	65126	66343
GCA_016728205.1	GCA_016728205.1_01504	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.97	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP068157.1	1577709	1579130
GCA_937989495.1	GCA_937989495.1_01714	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CALKBG010000110.1	17927	19117
GCA_001457635.1	GCA_001457635.1_01810	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	LN831051.1	1693207	1694406
GCA_002694325.1	GCA_002694325.1_01388	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	220	218	78.44	52.63	171	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	NZLX01000088.1	12839	13501
GCA_002694325.1	GCA_002694325.1_01389	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	478	631	73.06	45.24	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NZLX01000088.1	13536	14972
GCA_002694325.1	GCA_002694325.1_02629	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	140	137	88.32	50.40	125	WP_012695486.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	NZLX01000080.1	35375	35797
GCA_008726215.1	GCA_008726215.1_01603	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	VYVF01000042.1	8517	10436
GCA_008726215.1	GCA_008726215.1_01759	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VYVF01000052.1	3623	5404
GCA_008726215.1	GCA_008726215.1_02135	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.54	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VYVF01000008.1	68911	69765
GCA_018128065.1	GCA_018128065.1_00342	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072360.1	401474	402664
GCA_000477535.1	GCA_000477535.1_00282	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	AWGW01000006.1	107112	108077
GCA_000477535.1	GCA_000477535.1_00842	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	AWGW01000007.1	350462	352387
GCA_018206635.1	GCA_018206635.1_02243	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691746.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JADRFZ010000007.1	28774	30693
GCA_018206635.1	GCA_018206635.1_02254	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JADRFZ010000007.1	37983	38777
GCA_018206635.1	GCA_018206635.1_02255	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JADRFZ010000007.1	38870	39412
GCA_018206635.1	GCA_018206635.1_02256	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255864.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JADRFZ010000007.1	39409	40317
GCA_018206635.1	GCA_018206635.1_02348	blaOXA-85	oxacillin-hydrolyzing class D beta-lactamase OXA-85	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	261	261	100.00	100.00	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	JADRFZ010000008.1	27263	28048
GCA_018206635.1	GCA_018206635.1_02353	aadE	aminoglycoside 6-adenylyltransferase AadE	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	288	288	100.00	100.00	288	WP_001255868.1	aminoglycoside 6-adenylyltransferase AadE	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JADRFZ010000008.1	31579	32445
GCA_018206635.1	GCA_018206635.1_02363	tet(40)	tetracycline efflux MFS transporter Tet(40)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	406	406	100.00	100.00	406	WP_009247026.1	tetracycline efflux MFS transporter Tet(40)	NF000049.1	tetracycline efflux MFS transporter Tet(40)	JADRFZ010000008.1	40650	41870
GCA_018206635.1	GCA_018206635.1_02364	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_011187228.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JADRFZ010000008.1	41921	43840
GCA_001698025.1	GCA_001698025.1_00086	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016680.1	94400	95305
GCA_001698025.1	GCA_001698025.1_00835	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016680.1	856023	857402
GCA_001698025.1	GCA_001698025.1_01926	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.82	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016680.1	1924598	1926124
GCA_001698025.1	GCA_001698025.1_02119	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016680.1	2127440	2129008
GCA_001698025.1	GCA_001698025.1_02121	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016680.1	2129832	2130464
GCA_001698025.1	GCA_001698025.1_02122	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016680.1	2130868	2132106
GCA_023347705.1	GCA_023347705.1_01220	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP096649.1	1210977	1211708
GCA_024204865.1	GCA_024204865.1_00034	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP093196.1	38097	38495
GCA_024204865.1	GCA_024204865.1_00035	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP093196.1	38718	39461
GCA_024204865.1	GCA_024204865.1_00040	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP093196.1	42811	44817
GCA_024204865.1	GCA_024204865.1_00041	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP093196.1	44917	46674
GCA_024204865.1	GCA_024204865.1_00042	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP093196.1	46674	47045
GCA_024204865.1	GCA_024204865.1_00054	fosD	fosfomycin resistance bacillithiol transferase FosD	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000616116.1	fosfomycin resistance bacillithiol transferase FosD	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP093196.1	56822	57241
GCA_024204865.1	GCA_024204865.1_00095	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093196.1	92062	92844
GCA_024204865.1	GCA_024204865.1_00096	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093196.1	92970	93701
GCA_024204865.1	GCA_024204865.1_00120	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	CP093196.1	114899	115234
GCA_024204865.1	GCA_024204865.1_00121	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP093196.1	115292	116935
GCA_024204865.1	GCA_024204865.1_00122	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP093196.1	117017	117667
GCA_024204865.1	GCA_024204865.1_00131	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP093196.1	125121	126410
GCA_024204865.1	GCA_024204865.1_00134	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP093196.1	128588	128935
GCA_024204865.1	GCA_024204865.1_00212	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP093196.1	208274	208510
GCA_024204865.1	GCA_024204865.1_00262	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP093196.1	266307	267374
GCA_024204865.1	GCA_024204865.1_00777	fosD	fosfomycin resistance bacillithiol transferase FosD	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000616116.1	fosfomycin resistance bacillithiol transferase FosD	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP093196.1	804480	804899
GCA_024204865.1	GCA_024204865.1_00923	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093196.1	940774	941619
GCA_024204865.1	GCA_024204865.1_00924	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.89	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093196.1	941726	943483
GCA_024204865.1	GCA_024204865.1_00925	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093196.1	943473	943853
GCA_024204865.1	GCA_024204865.1_01129	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093196.1	1104499	1105281
GCA_024204865.1	GCA_024204865.1_01130	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093196.1	1105407	1106138
GCA_024204865.1	GCA_024204865.1_01253	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093196.1	1249786	1250568
GCA_024204865.1	GCA_024204865.1_01254	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093196.1	1250694	1251425
GCA_024204865.1	GCA_024204865.1_01606	fosD	fosfomycin resistance bacillithiol transferase FosD	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000616116.1	fosfomycin resistance bacillithiol transferase FosD	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP093196.1	1626475	1626894
GCA_024204865.1	GCA_024204865.1_01783	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP093196.1	1811726	1813165
GCA_024204865.1	GCA_024204865.1_01786	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP093196.1	1814921	1815406
GCA_024204865.1	GCA_024204865.1_02022	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093196.1	2041507	2042238
GCA_024204865.1	GCA_024204865.1_02023	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093196.1	2042364	2043146
GCA_024204865.1	GCA_024204865.1_02220	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093196.1	2237331	2238062
GCA_024204865.1	GCA_024204865.1_02221	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093196.1	2238188	2238970
GCA_024204865.1	GCA_024204865.1_02622	fosD	fosfomycin resistance bacillithiol transferase FosD	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000616116.1	fosfomycin resistance bacillithiol transferase FosD	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP093197.1	12104	12523
GCA_024204865.1	GCA_024204865.1_02624	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP093197.1	13194	13754
GCA_024204865.1	GCA_024204865.1_02625	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP093197.1	13938	15482
GCA_029926865.1	GCA_029926865.1_00226	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAREFD010000015.1	539	2005
GCA_029926865.1	GCA_029926865.1_00227	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAREFD010000015.1	2104	3003
GCA_029926865.1	GCA_029926865.1_00229	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAREFD010000015.1	4307	4873
GCA_029926865.1	GCA_029926865.1_00230	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAREFD010000015.1	5051	6595
GCA_029926865.1	GCA_029926865.1_00240	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREFD010000016.1	87	467
GCA_029926865.1	GCA_029926865.1_00241	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREFD010000016.1	457	2214
GCA_029926865.1	GCA_029926865.1_00242	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREFD010000016.1	2321	3166
GCA_029926865.1	GCA_029926865.1_00249	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JAREFD010000017.1	655	3729
GCA_029926865.1	GCA_029926865.1_00252	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JAREFD010000017.1	6141	6545
GCA_029926865.1	GCA_029926865.1_00253	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JAREFD010000017.1	6762	7505
GCA_029926865.1	GCA_029926865.1_01176	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.78	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFD010000002.1	153478	154767
GCA_029926865.1	GCA_029926865.1_01180	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREFD010000002.1	156933	157280
GCA_029926865.1	GCA_029926865.1_01275	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.96	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAREFD010000002.1	247152	248795
GCA_902488655.1	GCA_902488655.1_00372	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CABTXC010000007.1	2655	3083
GCA_000174775.1	GCA_000174775.1_00782	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	ACLR01000171.1	18943	19743
GCA_000174775.1	GCA_000174775.1_00786	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	ACLR01000171.1	24292	26217
GCA_024129445.1	GCA_024129445.1_00121	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	146	144	88.89	51.16	129	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	JAMXYD010000001.1	119293	119733
GCA_024129445.1	GCA_024129445.1_02909	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	294	97.28	42.28	298	WP_006027381.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAMXYD010000007.1	23832	24731
GCA_022689785.1	GCA_022689785.1_00025	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	161	161	100.00	100.00	161	WP_011428879.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JALCWS010000011.1	5195	5680
GCA_022689785.1	GCA_022689785.1_00045	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCWS010000012.1	3622	5166
GCA_022689785.1	GCA_022689785.1_00046	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCWS010000012.1	5350	5910
GCA_022689785.1	GCA_022689785.1_00058	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCWS010000013.1	4562	6028
GCA_022689785.1	GCA_022689785.1_00061	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCWS010000013.1	7833	8213
GCA_022689785.1	GCA_022689785.1_00062	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCWS010000013.1	8203	9960
GCA_022689785.1	GCA_022689785.1_00063	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCWS010000013.1	10067	10912
GCA_022689785.1	GCA_022689785.1_00096	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JALCWS010000018.1	396	1139
GCA_022689785.1	GCA_022689785.1_00097	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JALCWS010000018.1	1362	1760
GCA_022689785.1	GCA_022689785.1_00661	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JALCWS010000022.1	284	925
GCA_022689785.1	GCA_022689785.1_01765	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.62	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWS010000004.1	128390	129679
GCA_022689785.1	GCA_022689785.1_01768	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWS010000004.1	131847	132194
GCA_002093575.1	GCA_002093575.1_00233	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	LNVH01000001.1	225361	225789
GCA_002093575.1	GCA_002093575.1_00871	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LNVH01000003.1	77296	79215
GCA_001908715.1	GCA_001908715.1_00130	blaSHV-11	broad-spectrum class A beta-lactamase SHV-11	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_004176269.1	broad-spectrum class A beta-lactamase SHV-11	NF000285.3	SHV family class A beta-lactamase	CP018676.1	137306	138166
GCA_001908715.1	GCA_001908715.1_00393	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	135	102	100.00	61.32	106	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP018676.1	392334	392741
GCA_001908715.1	GCA_001908715.1_01400	oqxA	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	EXACTP	391	391	100.00	100.00	391	WP_002914189.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NF000272.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	CP018676.1	1436045	1437220
GCA_001908715.1	GCA_001908715.1_01401	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	EXACTP	1050	1050	100.00	100.00	1050	WP_000347934.1	multidrug efflux RND transporter permease subunit OqxB	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP018676.1	1437244	1440396
GCA_001908715.1	GCA_001908715.1_01735	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	140	141	98.58	78.42	139	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP018676.1	1775617	1776039
GCA_001908715.1	GCA_001908715.1_02616	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.24	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP018676.1	2638955	2640139
GCA_001908715.1	GCA_001908715.1_02758	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP018676.1	2783821	2784723
GCA_001908715.1	GCA_001908715.1_03312	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	98.56	139	WP_004146118.1	FosA5 family fosfomycin resistance glutathione transferase	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP018676.1	3352749	3353168
GCA_001908715.1	GCA_001908715.1_03897	aac(3)-IVa	aminoglycoside N-acetyltransferase AAC(3)-IVa	core	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	EXACTP	258	258	100.00	100.00	258	WP_001199192.1	aminoglycoside N-acetyltransferase AAC(3)-IVa	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	CP018676.1	3952311	3953087
GCA_001908715.1	GCA_001908715.1_03906	blaKPC-4	carbapenem-hydrolyzing class A beta-lactamase KPC-4	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	293	293	100.00	100.00	293	WP_015062847.1	carbapenem-hydrolyzing class A beta-lactamase KPC-4	NF012141.1	KPC family carbapenem-hydrolyzing class A beta-lactamase	CP018676.1	3964569	3965450
GCA_001908715.1	GCA_001908715.1_04304	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	100.00	99.76	410	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP018676.1	4376127	4377359
GCA_001908715.1	GCA_001908715.1_05179	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	91.61	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP018675.1	59875	60306
GCA_001908715.1	GCA_001908715.1_05180	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	491	491	100.00	100.00	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP018675.1	60557	62032
GCA_001908715.1	GCA_001908715.1_05181	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	226	226	100.00	100.00	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP018675.1	62025	62705
GCA_001908715.1	GCA_001908715.1_05182	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	461	461	100.00	100.00	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP018675.1	62895	64280
GCA_001908715.1	GCA_001908715.1_05183	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP018675.1	64309	64662
GCA_001908715.1	GCA_001908715.1_05184	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	97.67	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP018675.1	64776	66068
GCA_001908715.1	GCA_001908715.1_05185	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.85	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP018675.1	66079	69225
GCA_001908715.1	GCA_001908715.1_05187	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	94.49	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP018675.1	69879	72326
GCA_001908715.1	GCA_001908715.1_05191	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	EXACTP	605	605	100.00	100.00	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP018675.1	74307	76124
GCA_001908715.1	GCA_001908715.1_05192	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP018675.1	76124	77020
GCA_001908715.1	GCA_001908715.1_05193	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP018675.1	77060	77440
GCA_001908715.1	GCA_001908715.1_05194	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	BLASTP	309	309	100.00	99.68	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP018675.1	77445	78374
GCA_001908715.1	GCA_001908715.1_05195	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP018675.1	78429	79109
GCA_001908715.1	GCA_001908715.1_05196	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.14	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP018675.1	79106	80506
GCA_001908715.1	GCA_001908715.1_05197	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	94.44	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	CP018675.1	80723	81157
GCA_001908715.1	GCA_001908715.1_05208	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	141	141	100.00	100.00	141	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP018675.1	89193	89618
GCA_001908715.1	GCA_001908715.1_05209	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	429	429	100.00	100.00	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP018675.1	89631	90920
GCA_001908715.1	GCA_001908715.1_05210	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	583	583	100.00	100.00	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP018675.1	90968	92719
GCA_001908715.1	GCA_001908715.1_05211	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	91.67	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP018675.1	92737	93099
GCA_001908715.1	GCA_001908715.1_05212	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	116	116	100.00	100.00	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP018675.1	93149	93499
GCA_001908715.1	GCA_001908715.1_05229	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	931	949	97.89	99.25	929	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP018675.1	102945	105740
GCA_001908715.1	GCA_001908715.1_05230	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	EXACTP	189	189	100.00	100.00	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	CP018675.1	105855	106424
GCA_001908715.1	GCA_001908715.1_05254	blaKPC-4	carbapenem-hydrolyzing class A beta-lactamase KPC-4	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	293	293	100.00	100.00	293	WP_015062847.1	carbapenem-hydrolyzing class A beta-lactamase KPC-4	NF012141.1	KPC family carbapenem-hydrolyzing class A beta-lactamase	CP018675.1	133619	134500
GCA_001908715.1	GCA_001908715.1_05261	aph(4)-Ia	aminoglycoside O-phosphotransferase APH(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	HYGROMYCIN	BLASTP	341	341	100.00	99.71	341	WP_000742814.1	aminoglycoside O-phosphotransferase APH(4)-Ia	NF000107.2	aminoglycoside O-phosphotransferase APH(4)-Ia	CP018675.1	144331	145356
GCA_001908715.1	GCA_001908715.1_05262	aac(3)-IVa	aminoglycoside N-acetyltransferase AAC(3)-IVa	core	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	EXACTP	258	258	100.00	100.00	258	WP_001199192.1	aminoglycoside N-acetyltransferase AAC(3)-IVa	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	CP018675.1	145585	146361
GCA_001908715.1	GCA_001908715.1_05279	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP018675.1	158037	158876
GCA_001908715.1	GCA_001908715.1_05280	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP018675.1	158870	159217
GCA_002172955.1	GCA_002172955.1_01561	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	754	631	85.90	42.47	551	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NHBJ01000044.1	25672	27936
GCA_002172955.1	GCA_002172955.1_02451	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	277	272	99.26	59.35	278	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	NHBJ01000026.1	6875	7708
GCA_022569205.1	GCA_022569205.1_00140	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKQ010000001.1	146116	147189
GCA_022569205.1	GCA_022569205.1_00276	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKQ010000001.1	294681	295973
GCA_022569205.1	GCA_022569205.1_01273	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKQ010000002.1	318833	319252
GCA_022569205.1	GCA_022569205.1_02486	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAKRKQ010000009.1	1406	2137
GCA_022569205.1	GCA_022569205.1_02487	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JAKRKQ010000009.1	2263	3045
GCA_000805675.1	GCA_000805675.1_02058	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JSEF01000016.1	51137	52561
GCA_019930045.1	GCA_019930045.1_01697	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAHZQQ010000057.1	3797	5260
GCA_019930045.1	GCA_019930045.1_01698	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAHZQQ010000057.1	5380	6597
GCA_015336085.1	GCA_015336085.1_01731	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.83	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP064117.1	1865065	1866867
GCA_015336085.1	GCA_015336085.1_01732	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	600	600	100.00	100.00	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP064117.1	1866854	1868656
GCA_015336085.1	GCA_015336085.1_02137	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	102	102	97.06	47.37	114	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP064117.1	2297535	2297843
GCA_015336085.1	GCA_015336085.1_02266	yfeA	iron/manganese ABC transporter substrate-binding protein YfeA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	322	322	100.00	100.00	322	AAC46147.1	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	CP064117.1	2422835	2423803
GCA_015336085.1	GCA_015336085.1_02267	yfeB	iron/manganese ABC transporter ATP-binding protein YfeB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	296	296	100.00	100.00	296	AAC46148.1	iron/manganese ABC transporter ATP-binding protein YfeB	NA	NA	CP064117.1	2423800	2424690
GCA_015336085.1	GCA_015336085.1_02269	yfeD	iron/manganese ABC transporter permease subunit YfeD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	297	100.00	99.66	297	AAC46150.1	iron/manganese ABC transporter permease subunit YfeD	NA	NA	CP064117.1	2425571	2426464
GCA_015336085.1	GCA_015336085.1_02947	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	121	102	100.00	52.46	122	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP064117.1	3140955	3141320
GCA_015336085.1	GCA_015336085.1_03153	ymoA	expression modulating protein YmoA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	67	67	100.00	100.00	67	AAQ90017.1	expression modulating protein YmoA	NA	NA	CP064117.1	3337917	3338120
GCA_045159995.1	GCA_045159995.1_01651	blaOXA-85	oxacillin-hydrolyzing class D beta-lactamase OXA-85	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	261	261	100.00	100.00	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	CP077160.1	1603452	1604237
GCA_030176905.1	GCA_030176905.1_00929	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASNVQ010000024.1	522	2303
GCA_030176905.1	GCA_030176905.1_01404	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASNVQ010000004.1	53294	54469
GCA_030176905.1	GCA_030176905.1_01410	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVQ010000004.1	60801	61655
GCA_918292745.1	GCA_918292745.1_02400	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	91.87	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CAKJZK010000001.1	3145861	3147192
GCA_918292745.1	GCA_918292745.1_03667	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.21	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CAKJZK010000001.1	4709383	4710264
GCA_000013425.1	GCA_000013425.1_00086	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP000253.1	103069	104427
GCA_000013425.1	GCA_000013425.1_00282	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP000253.1	329364	330719
GCA_000013425.1	GCA_000013425.1_00320	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP000253.1	363894	364505
GCA_000013425.1	GCA_000013425.1_01557	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP000253.1	1611370	1612122
GCA_000013425.1	GCA_000013425.1_01732	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP000253.1	1804782	1806074
GCA_000013425.1	GCA_000013425.1_01774	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP000253.1	1843316	1844032
GCA_000013425.1	GCA_000013425.1_01777	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP000253.1	1845807	1846529
GCA_000013425.1	GCA_000013425.1_01778	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP000253.1	1846654	1847361
GCA_000013425.1	GCA_000013425.1_01788	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP000253.1	1859010	1859993
GCA_000013425.1	GCA_000013425.1_01789	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP000253.1	1859995	1860915
GCA_000013425.1	GCA_000013425.1_02018	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP000253.1	2033113	2033463
GCA_000013425.1	GCA_000013425.1_02023	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP000253.1	2035675	2036166
GCA_000013425.1	GCA_000013425.1_02104	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP000253.1	2093504	2093638
GCA_000013425.1	GCA_000013425.1_02254	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP000253.1	2246027	2247469
GCA_000013425.1	GCA_000013425.1_02430	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP000253.1	2399531	2399950
GCA_000013425.1	GCA_000013425.1_02520	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP000253.1	2489193	2490158
GCA_000013425.1	GCA_000013425.1_02521	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP000253.1	2490726	2491673
GCA_000013425.1	GCA_000013425.1_02522	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP000253.1	2491675	2492652
GCA_000013425.1	GCA_000013425.1_02598	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1627	1115	61.43	99.27	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP000253.1	2570009	2574892
GCA_000013425.1	GCA_000013425.1_02744	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP000253.1	2732674	2734203
GCA_000013425.1	GCA_000013425.1_02778	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP000253.1	2777537	2778589
GCA_002091595.1	GCA_002091595.1_01891	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	256	267	96.25	56.81	257	WP_012479999.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	BDAA01000003.1	241634	242404
GCA_002091595.1	GCA_002091595.1_02086	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	413	100.00	80.05	416	CAK15125.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	BDAA01000004.1	49741	50982
GCA_002091595.1	GCA_002091595.1_02756	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	99.26	63.70	135	WP_015741374.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	BDAA01000006.1	102881	103291
GCA_002091595.1	GCA_002091595.1_05491	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	380	397	94.21	58.82	374	WP_104009838.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	BDAA01000031.1	18210	19352
GCA_015260395.1	GCA_015260395.1_01284	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JABZWT010000002.1	115026	115991
GCA_015260395.1	GCA_015260395.1_02218	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JABZWT010000102.1	3978	5903
GCA_015260395.1	GCA_015260395.1_02382	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZWT010000033.1	2088	3278
GCA_000517765.1	GCA_000517765.1_00401	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AZYV01000005.1	119303	121222
GCA_000517765.1	GCA_000517765.1_00402	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	AZYV01000005.1	122329	123066
GCA_023744155.1	GCA_023744155.1_00285	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	JAMRVD010000003.1	152700	154814
GCA_023744155.1	GCA_023744155.1_00924	tcrB	copper-translocating P-type ATPase TcrB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	700	710	100.00	96.76	710	AAL05407.1	copper-translocating P-type ATPase TcrB	NA	NA	JAMRVD010000003.1	823282	825384
GCA_023744155.1	GCA_023744155.1_01762	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAMRVD010000004.1	789452	791371
GCA_023744155.1	GCA_023744155.1_02002	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	97	97	100.00	97.94	97	EGO5141043.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAMRVD010000004.1	1009870	1010163
GCA_023744155.1	GCA_023744155.1_02003	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	123	123	100.00	99.19	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAMRVD010000004.1	1010165	1010536
GCA_023744155.1	GCA_023744155.1_02004	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	121	121	100.00	100.00	121	EGJ25783.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAMRVD010000004.1	1010670	1011035
GCA_023744155.1	GCA_023744155.1_02005	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	580	580	100.00	99.48	580	EGJ25784.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	JAMRVD010000004.1	1011071	1012813
GCA_023744155.1	GCA_023744155.1_02006	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	357	359	99.44	99.72	357	EGJ25785.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	JAMRVD010000004.1	1012899	1013972
GCA_023744155.1	GCA_023744155.1_02007	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	348	351	99.15	99.71	348	EGJ25786.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	JAMRVD010000004.1	1014011	1015057
GCA_009912415.1	GCA_009912415.1_00079	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP047815.1	92759	94117
GCA_009912415.1	GCA_009912415.1_00280	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.56	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP047815.1	323935	325290
GCA_009912415.1	GCA_009912415.1_01006	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP047815.1	1051385	1052230
GCA_009912415.1	GCA_009912415.1_01008	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	332	585	56.75	98.80	332	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	CP047815.1	1052813	1053811
GCA_009912415.1	GCA_009912415.1_01010	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP047815.1	1054083	1054463
GCA_009912415.1	GCA_009912415.1_01031	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP047815.1	1073105	1073722
GCA_009912415.1	GCA_009912415.1_01710	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP047815.1	1802573	1803865
GCA_009912415.1	GCA_009912415.1_01756	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	99.58	238	ABD30999.1	serine protease SplE	NA	NA	CP047815.1	1841304	1842020
GCA_009912415.1	GCA_009912415.1_01759	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA	CP047815.1	1843795	1844517
GCA_009912415.1	GCA_009912415.1_01760	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	230	235	97.87	95.65	230	ABD31004.1	serine protease SplA	NA	NA	CP047815.1	1844642	1845334
GCA_009912415.1	GCA_009912415.1_01765	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP047815.1	1849467	1850450
GCA_009912415.1	GCA_009912415.1_01766	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP047815.1	1850452	1851387
GCA_009912415.1	GCA_009912415.1_01924	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP047815.1	1978843	1979193
GCA_009912415.1	GCA_009912415.1_01941	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP047815.1	1996278	1996412
GCA_009912415.1	GCA_009912415.1_02086	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP047815.1	2146583	2148025
GCA_009912415.1	GCA_009912415.1_02253	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	98.56	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP047815.1	2293301	2293720
GCA_009912415.1	GCA_009912415.1_02338	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP047815.1	2382116	2383081
GCA_009912415.1	GCA_009912415.1_02339	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP047815.1	2383648	2384595
GCA_009912415.1	GCA_009912415.1_02340	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP047815.1	2384597	2385574
GCA_009912415.1	GCA_009912415.1_02559	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP047815.1	2623635	2625164
GCA_009912415.1	GCA_009912415.1_02594	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP047815.1	2666698	2667750
GCA_009912415.1	GCA_009912415.1_02641	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP047816.1	35	769
GCA_003044965.1	GCA_003044965.1_00412	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	POXN01000002.1	44675	45535
GCA_003044965.1	GCA_003044965.1_00414	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	POXN01000002.1	46768	47583
GCA_003044965.1	GCA_003044965.1_00415	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.25	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	POXN01000002.1	47644	48447
GCA_003044965.1	GCA_003044965.1_00416	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	POXN01000002.1	48447	49283
GCA_003044965.1	GCA_003044965.1_01152	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	POXN01000004.1	111141	112781
GCA_025150495.1	GCA_025150495.1_00286	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXSS010000110.1	4567	5967
GCA_000722695.1	GCA_000722695.1_01137	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JPFU01000013.1	36228	36656
GCA_000722695.1	GCA_000722695.1_01305	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JPFU01000013.1	222825	224024
GCA_000018985.1	GCA_000018985.1_00906	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP000919.1	872688	873887
GCA_000568615.1	GCA_000568615.1_04276	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	754	631	85.90	42.47	551	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AVBL01000029.1	14748	17012
GCA_000568615.1	GCA_000568615.1_04396	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	277	272	99.26	59.35	278	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	AVBL01000030.1	89829	90662
GCA_016127095.1	GCA_016127095.1_00350	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP065982.1	390426	391847
GCA_016127095.1	GCA_016127095.1_01263	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP065982.1	1419417	1420232
GCA_016127095.1	GCA_016127095.1_01266	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP065982.1	1421917	1422336
GCA_016127095.1	GCA_016127095.1_01267	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	209	278	75.18	99.52	209	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	CP065982.1	1422543	1423172
GCA_016127095.1	GCA_016127095.1_01268	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP065982.1	1423376	1424551
GCA_016127095.1	GCA_016127095.1_01297	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.16	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP065982.1	1454785	1456566
GCA_016127095.1	GCA_016127095.1_01302	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.16	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP065982.1	1460076	1461857
GCA_016127095.1	GCA_016127095.1_01305	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.16	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP065982.1	1465369	1467150
GCA_901542415.1	GCA_901542415.1_00545	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABEHV010000004.1	488539	490458
GCA_901542415.1	GCA_901542415.1_00724	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.24	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CABEHV010000004.1	695456	696655
GCA_000023145.1	GCA_000023145.1_01666	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	43.09	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP001620.1	1905702	1906070
GCA_027690995.1	GCA_027690995.1_01298	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQFBN010000026.1	766	1620
GCA_027690995.1	GCA_027690995.1_01509	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQFBN010000004.1	21461	21862
GCA_027690995.1	GCA_027690995.1_01698	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQFBN010000005.1	11988	12398
GCA_946997865.1	GCA_946997865.1_01269	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAMPXV010000053.1	13953	15143
GCA_030014025.1	GCA_030014025.1_00051	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	CP118825.1	50389	51027
GCA_030014025.1	GCA_030014025.1_00126	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP118825.1	121261	121659
GCA_030014025.1	GCA_030014025.1_00127	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP118825.1	121882	122625
GCA_030014025.1	GCA_030014025.1_00132	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP118825.1	126034	128040
GCA_030014025.1	GCA_030014025.1_00133	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP118825.1	128140	129897
GCA_030014025.1	GCA_030014025.1_00134	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	123	123	100.00	99.19	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP118825.1	129897	130268
GCA_030014025.1	GCA_030014025.1_00285	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP118825.1	265873	266718
GCA_030014025.1	GCA_030014025.1_00286	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP118825.1	266825	268582
GCA_030014025.1	GCA_030014025.1_00287	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP118825.1	268572	268952
GCA_030014025.1	GCA_030014025.1_02392	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP118825.1	2211203	2212843
GCA_030014025.1	GCA_030014025.1_02426	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP118827.1	1	1380
GCA_001808725.1	GCA_001808725.1_01069	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV794411.1	326284	327501
GCA_001808725.1	GCA_001808725.1_01070	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV794411.1	327621	329084
GCA_001808725.1	GCA_001808725.1_01075	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KV794411.1	330825	331253
GCA_001808725.1	GCA_001808725.1_01389	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV794411.1	642419	644338
GCA_001808725.1	GCA_001808725.1_01676	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.49	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	KV794411.1	939312	941048
GCA_001808725.1	GCA_001808725.1_01677	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	KV794411.1	941050	942774
GCA_022291195.1	GCA_022291195.1_00595	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAANHN010000001.1	631103	632395
GCA_022291195.1	GCA_022291195.1_01069	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAANHN010000001.1	1069037	1069522
GCA_022291195.1	GCA_022291195.1_02474	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAANHN010000008.1	11	856
GCA_022291195.1	GCA_022291195.1_02475	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAANHN010000008.1	963	2720
GCA_022291195.1	GCA_022291195.1_02476	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAANHN010000008.1	2710	3090
GCA_022291195.1	GCA_022291195.1_02490	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	459	459	100.00	99.78	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAANHN010000010.1	1110	2489
GCA_022291195.1	GCA_022291195.1_02516	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAANHN010000015.1	400	1839
GCA_022291195.1	GCA_022291195.1_02517	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAANHN010000005.1	405	890
GCA_022291195.1	GCA_022291195.1_02520	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAANHN010000007.1	625	1362
GCA_022291195.1	GCA_022291195.1_02521	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAANHN010000007.1	1667	2575
GCA_022291195.1	GCA_022291195.1_02522	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAANHN010000007.1	2572	3114
GCA_022291195.1	GCA_022291195.1_02523	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAANHN010000007.1	3207	4001
GCA_003492625.1	GCA_003492625.1_01071	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQLW01000003.1	75535	76440
GCA_003492625.1	GCA_003492625.1_01622	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQLW01000006.1	74142	75005
GCA_003492625.1	GCA_003492625.1_01623	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.84	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQLW01000006.1	75022	76260
GCA_003492625.1	GCA_003492625.1_01707	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.85	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQLW01000007.1	14120	15646
GCA_000233105.2	GCA_000233105.2_01105	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AGQA01000001.1	164244	165461
GCA_000233105.2	GCA_000233105.2_01857	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AGQA01000001.1	874722	876512
GCA_000833575.1	GCA_000833575.1_00398	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP010827.1	411600	412775
GCA_000833575.1	GCA_000833575.1_00400	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP010827.1	412979	413815
GCA_000833575.1	GCA_000833575.1_00401	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP010827.1	413815	414234
GCA_000833575.1	GCA_000833575.1_00405	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP010827.1	415918	416733
GCA_000833575.1	GCA_000833575.1_00838	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	471	547	84.28	44.59	471	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP010827.1	858148	859563
GCA_000833575.1	GCA_000833575.1_01262	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	98.83	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CP010827.1	1319449	1320990
GCA_000833575.1	GCA_000833575.1_02649	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.07	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP010827.1	2816007	2816861
GCA_024104875.1	GCA_024104875.1_01380	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTS010000004.1	225395	225805
GCA_001813675.1	GCA_001813675.1_00266	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV813650.1	257870	259087
GCA_001813675.1	GCA_001813675.1_00267	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV813650.1	259207	260670
GCA_001813675.1	GCA_001813675.1_01445	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	96.52	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	KV813675.1	370073	371797
GCA_001813675.1	GCA_001813675.1_01446	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.97	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	KV813675.1	371799	373535
GCA_001813675.1	GCA_001813675.1_01886	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV813676.1	77567	79486
GCA_936941285.1	GCA_936941285.1_00872	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	110	123	82.11	49.50	101	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAKZJG010000070.1	4272	4604
GCA_013277425.1	GCA_013277425.1_01050	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMMW01000003.1	43517	45436
GCA_000019005.1	GCA_000019005.1_00954	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP000920.1	895857	897056
GCA_000019005.1	GCA_000019005.1_01139	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP000920.1	1072571	1074490
GCA_000279535.1	GCA_000279535.1_00300	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	ALCH01000001.1	307223	307960
GCA_000279535.1	GCA_000279535.1_00311	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	ALCH01000001.1	317872	319791
GCA_000279535.1	GCA_000279535.1_01294	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	ALCH01000004.1	636434	637651
GCA_000279535.1	GCA_000279535.1_01295	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	PARTIALP	261	487	52.16	99.61	254	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NA	NA	ALCH01000004.1	637771	638556
GCA_000512995.1	GCA_000512995.1_00699	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.18	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	AZXX01000031.1	1136	1873
GCA_000512995.1	GCA_000512995.1_02108	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.90	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AZXX01000086.1	104760	106238
GCA_024677885.1	GCA_024677885.1_01000	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALBWL010000002.1	260940	262403
GCA_024677885.1	GCA_024677885.1_01001	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALBWL010000002.1	262523	263740
GCA_025399595.1	GCA_025399595.1_01389	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	404	390	95.38	47.20	375	WP_063857697.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	JAODVD010000003.1	378781	379995
GCA_025399595.1	GCA_025399595.1_01939	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.79	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	JAODVD010000004.1	199935	202784
GCA_025399595.1	GCA_025399595.1_02680	aac(3)-IV	AAC(3)-IV family aminoglycoside N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	262	265	96.98	82.10	257	WP_149317372.1	AAC(3)-IV family aminoglycoside N-acetyltransferase	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	JAODVD010000005.1	354680	355468
GCA_025399595.1	GCA_025399595.1_03851	blaOXA	OXA-837 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	301	100.00	82.95	305	WP_148281568.1	OXA-837 family class D beta-lactamase	NF042983.1	OXA-837 family class D beta-lactamase	JAODVD010000008.1	457760	458677
GCA_009295985.1	GCA_009295985.1_01021	ymoA	expression modulating protein YmoA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	67	67	100.00	100.00	67	AAQ90017.1	expression modulating protein YmoA	NA	NA	CP045158.1	1064554	1064757
GCA_009295985.1	GCA_009295985.1_01227	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	121	102	100.00	52.46	122	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP045158.1	1261340	1261705
GCA_009295985.1	GCA_009295985.1_01909	yfeD	iron/manganese ABC transporter permease subunit YfeD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	297	100.00	99.66	297	AAC46150.1	iron/manganese ABC transporter permease subunit YfeD	NA	NA	CP045158.1	1980730	1981623
GCA_009295985.1	GCA_009295985.1_01911	yfeB	iron/manganese ABC transporter ATP-binding protein YfeB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	296	296	100.00	100.00	296	AAC46148.1	iron/manganese ABC transporter ATP-binding protein YfeB	NA	NA	CP045158.1	1982504	1983394
GCA_009295985.1	GCA_009295985.1_01912	yfeA	iron/manganese ABC transporter substrate-binding protein YfeA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	322	322	100.00	100.00	322	AAC46147.1	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	CP045158.1	1983391	1984359
GCA_009295985.1	GCA_009295985.1_02400	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	600	600	100.00	100.00	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP045158.1	2482006	2483808
GCA_009295985.1	GCA_009295985.1_02401	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.83	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP045158.1	2483795	2485597
GCA_009295985.1	GCA_009295985.1_04371	yopO	type III secretion system effector protein kinase YopO/YpkA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	729	100.00	97.26	729	CFQ25321.1	type III secretion system effector protein kinase YopO/YpkA	NA	NA	CP045160.1	3483	5681
GCA_009295985.1	GCA_009295985.1_04372	yopJ	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	288	288	100.00	99.65	288	AKN09807.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	NF040632.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	CP045160.1	6077	6943
GCA_009295985.1	GCA_009295985.1_04374	yopH	T3SS effector protein-tyrosine-phosphatase YopH	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	468	468	100.00	98.50	468	AJJ21453.1	T3SS effector protein-tyrosine-phosphatase YopH	NA	NA	CP045160.1	8626	10032
GCA_009295985.1	GCA_009295985.1_04391	virF	virulence regulon transcriptional activator VirF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	271	271	100.00	97.79	271	AAD16833.1	virulence regulon transcriptional activator VirF	NA	NA	CP045160.1	22186	23001
GCA_009295985.1	GCA_009295985.1_04409	lcrV	type III secretion system needle tip protein LcrV	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	326	329	99.70	96.04	328	CNC59088.1	type III secretion system needle tip protein LcrV	NA	NA	CP045160.1	36198	37178
GCA_009295985.1	GCA_009295985.1_04411	yopB	type III secretion system translocon subunit YopB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	401	401	100.00	96.26	401	AAK69211.1	type III secretion system translocon subunit YopB	NA	NA	CP045160.1	37675	38880
GCA_009295985.1	GCA_009295985.1_04412	yopD	type III secretion system translocon subunit YopD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	306	100.00	97.71	306	AAK69210.1	type III secretion system translocon subunit YopD	NA	NA	CP045160.1	38899	39819
GCA_009295985.1	GCA_009295985.1_04420	yopT	T3SS effector cysteine protease YopT	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	322	322	100.00	92.55	322	AJJ21466.1	T3SS effector cysteine protease YopT	NA	NA	CP045160.1	45747	46715
GCA_009295985.1	GCA_009295985.1_04433	yopE	type III secretion system effector GTPase activator YopE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	219	219	100.00	94.06	219	AJJ21471.1	type III secretion system effector GTPase activator YopE	NA	NA	CP045160.1	55067	55726
GCA_000278725.1	GCA_000278725.1_00735	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	ALCA01000057.1	832	2751
GCA_025146355.1	GCA_025146355.1_00365	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JALXMS010000010.1	837	1691
GCA_001814485.1	GCA_001814485.1_01831	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV816933.1	194470	196128
GCA_002860825.1	GCA_002860825.1_01327	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	PKID01000004.1	118069	119268
GCA_020735905.1	GCA_020735905.1_00766	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	321	321	100.00	99.69	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP085940.1	929600	930565
GCA_027687665.1	GCA_027687665.1_00657	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQCQJ010000001.1	644599	645027
GCA_027687665.1	GCA_027687665.1_00863	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	92.39	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQCQJ010000001.1	874388	876124
GCA_027687665.1	GCA_027687665.1_00864	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	618	574	100.00	91.64	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQCQJ010000001.1	876126	877982
GCA_003443935.1	GCA_003443935.1_01442	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	CP010900.1	1548512	1549453
GCA_001077555.2	GCA_001077555.2_00074	amvA	multidrug efflux MFS transporter AmvA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	492	492	100.00	98.98	492	ACQ82816.1	multidrug efflux MFS transporter AmvA	NA	NA	CP021342.1	56333	57811
GCA_001077555.2	GCA_001077555.2_00394	blaADC-247	extended-spectrum class C beta-lactamase ADC-247	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	383	383	100.00	100.00	383	WP_032058755.1	extended-spectrum class C beta-lactamase ADC-247	NF000425.2	ADC family extended-spectrum class C beta-lactamase	CP021342.1	392658	393809
GCA_001077555.2	GCA_001077555.2_00577	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	397	397	100.00	99.24	397	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP021342.1	596214	597407
GCA_001077555.2	GCA_001077555.2_01623	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	BLASTP	262	262	100.00	98.85	262	WP_001279062.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	CP021342.1	1681494	1682282
GCA_001077555.2	GCA_001077555.2_02116	nreB	nickel resistance MFS transporter NreB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	416	416	100.00	98.08	416	ADY84088.1	nickel resistance MFS transporter NreB	NA	NA	CP021342.1	2196985	2198235
GCA_001077555.2	GCA_001077555.2_02897	abaF	fosfomycin efflux MFS transporter AbaF	plus	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	429	429	100.00	100.00	429	ABO11759.2	fosfomycin efflux MFS transporter AbaF	NA	NA	CP021342.1	2960742	2962031
GCA_001077555.2	GCA_001077555.2_03209	blaOXA-106	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-106	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_031963705.1	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-106	NF000268.2	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase	CP021342.1	3262476	3263300
GCA_030515755.1	GCA_030515755.1_02285	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP100367.1	2480271	2481122
GCA_030515755.1	GCA_030515755.1_02294	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	94.01	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100367.1	2489004	2489858
GCA_030515755.1	GCA_030515755.1_02303	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP100367.1	2502032	2503207
GCA_000479335.1	GCA_000479335.1_00648	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP006805.1	623853	624281
GCA_000479335.1	GCA_000479335.1_00928	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	92.21	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CP006805.1	924536	926272
GCA_000479335.1	GCA_000479335.1_00929	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.64	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CP006805.1	926274	927998
GCA_003626185.1	GCA_003626185.1_01247	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHB01000005.1	101668	102609
GCA_000185485.1	GCA_000185485.1_01939	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.54	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	GL622352.1	694555	695847
GCA_000185485.1	GCA_000185485.1_02085	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	GL622352.1	861108	862181
GCA_022690165.1	GCA_022690165.1_00806	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVY010000002.1	165075	165422
GCA_022690165.1	GCA_022690165.1_00810	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVY010000002.1	169105	170397
GCA_022690165.1	GCA_022690165.1_01485	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCVY010000004.1	256398	256778
GCA_022690165.1	GCA_022690165.1_01486	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCVY010000004.1	256768	258525
GCA_022690165.1	GCA_022690165.1_01487	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCVY010000004.1	258632	259477
GCA_900141925.1	GCA_900141925.1_01507	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	410	414	95.89	71.36	398	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	FQYS01000003.1	548622	549854
GCA_900141925.1	GCA_900141925.1_03209	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	135	100.00	68.89	135	WP_003082280.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	FQYS01000007.1	136247	136654
GCA_900141925.1	GCA_900141925.1_03593	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	58.24	261	WP_003161096.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	FQYS01000001.1	189155	189937
GCA_900141925.1	GCA_900141925.1_05063	blaLUT-1	extended-spectrum class A beta-lactamase LUT-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	296	296	100.00	100.00	296	WP_010798607.1	extended-spectrum class A beta-lactamase LUT-1	NF000324.2	LUT family class A beta-lactamase	FQYS01000018.1	66536	67426
GCA_900141925.1	GCA_900141925.1_05120	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	FQYS01000022.1	32617	32853
GCA_900141925.1	GCA_900141925.1_05121	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	FQYS01000022.1	32850	33215
GCA_900141925.1	GCA_900141925.1_05122	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.57	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FQYS01000022.1	33233	34918
GCA_900141925.1	GCA_900141925.1_05123	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	FQYS01000022.1	34990	35265
GCA_900141925.1	GCA_900141925.1_05124	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	FQYS01000022.1	35278	35628
GCA_900141925.1	GCA_900141925.1_05125	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	FQYS01000022.1	35700	36134
GCA_021025975.1	GCA_021025975.1_00078	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	JAJNBX010000010.1	69769	71148
GCA_021025975.1	GCA_021025975.1_00685	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.42	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	JAJNBX010000002.1	79440	80678
GCA_021025975.1	GCA_021025975.1_00987	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.64	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	JAJNBX010000003.1	152223	153749
GCA_021460765.1	GCA_021460765.1_01616	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAJBHU010000002.1	477963	479180
GCA_021460765.1	GCA_021460765.1_01617	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAJBHU010000002.1	479300	480763
GCA_004291195.1	GCA_004291195.1_00656	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	356	350	100.00	74.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	QHKG01000001.1	516588	517658
GCA_022729045.1	GCA_022729045.1_01853	sat2	streptothricin N-acetyltransferase Sat2	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	210	174	100.00	93.68	174	WP_000704156.1	streptothricin N-acetyltransferase Sat2	NF000358.1	streptothricin N-acetyltransferase Sat2	JALDWU010000018.1	155550	156182
GCA_022729045.1	GCA_022729045.1_01861	ble	bleomycin binding protein BLMT	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	126	126	100.00	100.00	126	WP_000131935.1	bleomycin binding protein BLMT	NF000005.4	BLMT family bleomycin binding protein	JALDWU010000018.1	162362	162742
GCA_022729045.1	GCA_022729045.1_01862	aph(6)-Ic	aminoglycoside O-phosphotransferase APH(6)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	280	100.00	91.07	280	WP_000116906.1	aminoglycoside O-phosphotransferase APH(6)-Ic	NF000011.2	aminoglycoside O-phosphotransferase APH(6)-Ic	JALDWU010000018.1	162739	163575
GCA_022729045.1	GCA_022729045.1_02116	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	302	97.68	56.81	301	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JALDWU010000018.1	444407	445297
GCA_000477715.1	GCA_000477715.1_00840	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	148	120	100.00	48.39	124	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KI515698.1	971095	971541
GCA_000477715.1	GCA_000477715.1_01403	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	130	120	100.00	48.85	131	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KI515700.1	52551	52943
GCA_025145625.2	GCA_025145625.2_00447	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALXLO020000001.1	466828	468120
GCA_025145625.2	GCA_025145625.2_02476	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALXLO020000002.1	3866	4213
GCA_025145625.2	GCA_025145625.2_02480	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALXLO020000002.1	7896	9188
GCA_015326545.1	GCA_015326545.1_01896	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	77.86	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP064059.1	1916937	1918229
GCA_003989495.1	GCA_003989495.1_01012	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RBLY01000003.1	128816	129670
GCA_016127635.1	GCA_016127635.1_00043	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	133	95.49	58.59	128	WP_010989789.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP066024.1	40499	40909
GCA_016127635.1	GCA_016127635.1_00312	vanC	D-alanine--D-serine ligase VanC2/3	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	350	350	100.00	99.71	350	WP_063856635.1	D-alanine--D-serine ligase VanC2/3	NF012214.1	D-alanine--D-serine ligase VanC	CP066024.1	270251	271303
GCA_016127635.1	GCA_016127635.1_00313	vanXY-C	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	190	190	100.00	100.00	190	WP_010749757.1	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	NF000380.1	D,D-carboxypeptidase/D,D-dipeptidase VanXY	CP066024.1	271300	271872
GCA_016127635.1	GCA_016127635.1_00314	vanTc	membrane-bound serine racemase VanT	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	700	700	100.00	99.86	700	WP_063856759.1	membrane-bound serine racemase VanT	NF033132.1	membrane-bound serine racemase VanT	CP066024.1	271869	273971
GCA_016127635.1	GCA_016127635.1_00315	vanR-C	vancomycin resistance response regulator transcription factor VanR-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	231	231	100.00	100.00	231	WP_005228837.1	vancomycin resistance response regulator transcription factor VanR-C	NF000403.1	vancomycin resistance response regulator transcription factor VanR-C	CP066024.1	274070	274765
GCA_016127635.1	GCA_016127635.1_00316	vanS-C	vancomycin resistance histidine kinase VanS-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	376	376	100.00	99.73	376	WP_034869172.1	vancomycin resistance histidine kinase VanS-C	NF033091.0	vancomycin resistance histidine kinase VanS	CP066024.1	274755	275885
GCA_000009105.1	GCA_000009105.1_00990	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	AL157959.1	983641	985020
GCA_000009105.1	GCA_000009105.1_01714	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	AL157959.1	1726134	1727039
GCA_000009105.1	GCA_000009105.1_01900	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.82	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	AL157959.1	1906950	1908188
GCA_000009105.1	GCA_000009105.1_01901	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	96.67	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	AL157959.1	1908596	1909228
GCA_000009105.1	GCA_000009105.1_01903	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	AL157959.1	1910053	1911621
GCA_000009105.1	GCA_000009105.1_02094	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.21	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	AL157959.1	2112202	2113728
GCA_001069915.1	GCA_001069915.1_00696	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JWGF01000044.1	72296	73759
GCA_001069915.1	GCA_001069915.1_00697	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JWGF01000044.1	73879	75096
GCA_003603595.1	GCA_003603595.1_00625	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	QTNK01000001.1	622413	624332
GCA_003603595.1	GCA_003603595.1_00630	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	QTNK01000001.1	626058	627521
GCA_003603595.1	GCA_003603595.1_00631	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	QTNK01000001.1	627641	628858
GCA_003603595.1	GCA_003603595.1_00738	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	QTNK01000001.1	722278	722772
GCA_003603595.1	GCA_003603595.1_00975	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	94.81	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	QTNK01000001.1	977178	978914
GCA_003603595.1	GCA_003603595.1_00976	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	618	574	100.00	93.90	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	QTNK01000001.1	978916	980772
GCA_012972145.1	GCA_012972145.1_01664	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	154	92.86	61.54	143	WP_015860243.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP052770.1	1700215	1700634
GCA_012972145.1	GCA_012972145.1_02166	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	263	266	97.74	57.69	260	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP052770.1	2233782	2234573
GCA_012972145.1	GCA_012972145.1_03460	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	275	269	96.28	53.96	265	WP_338424127.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP052770.1	3556307	3557134
GCA_001683355.1	GCA_001683355.1_00208	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP016204.1	272696	273886
GCA_001683355.1	GCA_001683355.1_01817	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP016205.1	298525	299490
GCA_022486405.1	GCA_022486405.1_00194	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVGK010000012.1	52338	53627
GCA_022486405.1	GCA_022486405.1_00195	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVGK010000012.1	53645	54046
GCA_022486405.1	GCA_022486405.1_00412	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAKVGK010000017.1	1333	1875
GCA_022486405.1	GCA_022486405.1_00413	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAKVGK010000017.1	1968	2762
GCA_022486405.1	GCA_022486405.1_00427	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKVGK010000017.1	15616	16461
GCA_022486405.1	GCA_022486405.1_00428	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKVGK010000017.1	16568	18325
GCA_022486405.1	GCA_022486405.1_00429	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKVGK010000017.1	18315	18695
GCA_022486405.1	GCA_022486405.1_01083	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKVGK010000020.1	2677	4683
GCA_022486405.1	GCA_022486405.1_01085	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAKVGK010000021.1	1720	2205
GCA_018847595.1	GCA_018847595.1_00199	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	295	303	85.48	39.77	259	WP_041881964.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP072046.1	236978	237865
GCA_018847595.1	GCA_018847595.1_00999	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP072046.1	1146528	1147343
GCA_018847595.1	GCA_018847595.1_01000	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP072046.1	1147788	1148207
GCA_018847595.1	GCA_018847595.1_01001	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP072046.1	1148207	1149043
GCA_030175915.1	GCA_030175915.1_00897	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASNTZ010000020.1	21168	22343
GCA_030175915.1	GCA_030175915.1_00907	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNTZ010000021.1	9157	10011
GCA_000297075.2	GCA_000297075.2_01370	tmexD	multidrug efflux RND transporter permease subunit TMexD	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	1044	1044	100.00	96.36	1044	WP_027591160.1	multidrug efflux RND transporter permease subunit TMexD2	NA	NA	HG916826.1	1413903	1417037
GCA_000297075.2	GCA_000297075.2_01700	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.57	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	HG916826.1	1727594	1730443
GCA_000297075.2	GCA_000297075.2_02123	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	412	414	100.00	74.88	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	HG916826.1	2175291	2176529
GCA_000297075.2	GCA_000297075.2_03921	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	49.45	91	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	HG916826.1	3921988	3922263
GCA_000297075.2	GCA_000297075.2_04692	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	94.44	144	AAC38229.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	HG916826.1	4646080	4646514
GCA_000297075.2	GCA_000297075.2_04693	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	AAA98222.1	mercuric transport protein MerT	NA	NA	HG916826.1	4646586	4646936
GCA_000297075.2	GCA_000297075.2_04694	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	98.90	93.33	90	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	HG916826.1	4646952	4647227
GCA_000297075.2	GCA_000297075.2_04695	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	81	81	100.00	100.00	81	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	HG916826.1	4647230	4647475
GCA_000297075.2	GCA_000297075.2_04696	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	548	561	100.00	85.20	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	HG916826.1	4647472	4649118
GCA_000297075.2	GCA_000297075.2_04697	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	98.35	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	HG916826.1	4649135	4649500
GCA_000297075.2	GCA_000297075.2_04698	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	HG916826.1	4649497	4649733
GCA_001838065.1	GCA_001838065.1_00662	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	KV835590.1	43	879
GCA_001838065.1	GCA_001838065.1_00663	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	KV835590.1	879	1298
GCA_001838065.1	GCA_001838065.1_00693	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	KV835594.1	478	1338
GCA_001838065.1	GCA_001838065.1_00702	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043265.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	KV835594.1	7525	8340
GCA_001838065.1	GCA_001838065.1_01002	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089072.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	KV835604.1	4191	5396
GCA_003627355.1	GCA_003627355.1_01481	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.44	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP032648.1	1502846	1504960
GCA_000185845.1	GCA_000185845.1_01656	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	GL629647.1	1930795	1931760
GCA_022690525.1	GCA_022690525.1_01264	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.59	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCVH010000026.1	522	1988
GCA_022690525.1	GCA_022690525.1_01265	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JALCVH010000026.1	2087	2986
GCA_022690525.1	GCA_022690525.1_01267	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCVH010000026.1	4285	4845
GCA_022690525.1	GCA_022690525.1_01268	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCVH010000026.1	5029	6573
GCA_022690525.1	GCA_022690525.1_01291	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	JALCVH010000029.1	3217	4785
GCA_022690525.1	GCA_022690525.1_01713	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	PARTIALP	106	205	51.71	96.23	106	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JALCVH010000040.1	289	609
GCA_022690525.1	GCA_022690525.1_01719	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVH010000004.1	4950	5297
GCA_022690525.1	GCA_022690525.1_01730	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALCVH010000004.1	16429	16821
GCA_022690525.1	GCA_022690525.1_01731	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.17	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVH010000004.1	16839	18131
GCA_015560905.1	GCA_015560905.1_01092	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	59.85	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JADMSS010000085.1	405	833
GCA_015560905.1	GCA_015560905.1_01229	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADMSS010000094.1	1937	3400
GCA_015560905.1	GCA_015560905.1_01230	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADMSS010000094.1	3520	4737
GCA_900475015.1	GCA_900475015.1_01263	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	LS483341.1	1288245	1288673
GCA_014265085.1	GCA_014265085.1_00131	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMXR010000013.1	16606	18150
GCA_014265085.1	GCA_014265085.1_00132	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMXR010000013.1	18328	18894
GCA_014265085.1	GCA_014265085.1_00201	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMXR010000017.1	7103	7450
GCA_014265085.1	GCA_014265085.1_00205	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXR010000017.1	11133	12425
GCA_014265085.1	GCA_014265085.1_00210	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMXR010000018.1	5352	5723
GCA_014265085.1	GCA_014265085.1_00211	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMXR010000018.1	5723	7480
GCA_014265085.1	GCA_014265085.1_00212	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMXR010000018.1	7580	9586
GCA_014265085.1	GCA_014265085.1_00225	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMXR010000020.1	2463	2867
GCA_014265085.1	GCA_014265085.1_00226	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMXR010000020.1	3084	3827
GCA_014265085.1	GCA_014265085.1_00229	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMXR010000022.1	421	1155
GCA_014265085.1	GCA_014265085.1_00913	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXR010000005.1	42420	43712
GCA_014265085.1	GCA_014265085.1_00964	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMXR010000006.1	10298	10678
GCA_014265085.1	GCA_014265085.1_00965	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMXR010000006.1	10668	12425
GCA_014265085.1	GCA_014265085.1_00966	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMXR010000006.1	12532	13377
GCA_014265085.1	GCA_014265085.1_01079	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMXR010000007.1	38367	40007
GCA_026810185.1	GCA_026810185.1_00883	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP113953.1	914198	916117
GCA_026810185.1	GCA_026810185.1_01366	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP113953.1	1392847	1393275
GCA_000187465.1	GCA_000187465.1_01204	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	GL732439.1	1168174	1170093
GCA_000187465.1	GCA_000187465.1_01215	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	GL732439.1	1180008	1180745
GCA_004346635.1	GCA_004346635.1_03037	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.85	41.95	472	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	SMCX01000035.1	11152	12546
GCA_004346635.1	GCA_004346635.1_03316	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	SMCX01000064.1	82	1482
GCA_003968885.1	GCA_003968885.1_00456	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	356	350	100.00	74.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	RXXC01000002.1	3059	4129
GCA_000279715.1	GCA_000279715.1_00185	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	ALCN01000002.1	144161	145624
GCA_000279715.1	GCA_000279715.1_00186	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	ALCN01000002.1	145645	146862
GCA_000279715.1	GCA_000279715.1_00947	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	ALCN01000003.1	73975	75174
GCA_000279715.1	GCA_000279715.1_01021	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	ALCN01000003.1	142105	142533
GCA_019929665.1	GCA_019929665.1_00528	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZPZ010000001.1	545675	546103
GCA_019929665.1	GCA_019929665.1_00536	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAHZPZ010000001.1	552022	553485
GCA_019929665.1	GCA_019929665.1_00537	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAHZPZ010000001.1	553605	554822
GCA_019685855.1	GCA_019685855.1_01352	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JABEMV010000020.1	23445	23825
GCA_019685855.1	GCA_019685855.1_01353	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JABEMV010000020.1	23815	25572
GCA_019685855.1	GCA_019685855.1_01354	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JABEMV010000020.1	25679	26524
GCA_019685855.1	GCA_019685855.1_01406	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JABEMV010000026.1	2106	3485
GCA_019685855.1	GCA_019685855.1_01706	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JABEMV010000002.1	291437	292510
GCA_019685855.1	GCA_019685855.1_01918	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JABEMV010000003.1	61567	62856
GCA_000755185.1	GCA_000755185.1_00483	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP008913.1	555560	556984
GCA_015273445.1	GCA_015273445.1_00951	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGRC010000002.1	287393	288685
GCA_015273445.1	GCA_015273445.1_02489	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACGRC010000014.1	1384	1944
GCA_015273445.1	GCA_015273445.1_02490	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACGRC010000014.1	2128	3672
GCA_015273445.1	GCA_015273445.1_02550	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGRC010000021.1	661	1146
GCA_028335325.1	GCA_028335325.1_00672	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	501	500	99.40	80.68	497	WP_002296175.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP116581.1	745666	747171
GCA_028335325.1	GCA_028335325.1_01919	dfrF	trimethoprim-resistant dihydrofolate reductase DfrF	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	157	164	95.12	100.00	156	WP_002322211.1	trimethoprim-resistant dihydrofolate reductase DfrF	NF000333.1	trimethoprim-resistant dihydrofolate reductase DfrF	CP116581.1	2011935	2012408
GCA_028335325.1	GCA_028335325.1_01979	copB	copper/silver-translocating P-type ATPase CopB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	786	745	95.57	83.08	733	AFM70730.1	copper/silver-translocating P-type ATPase CopB	NA	NA	CP116581.1	2073627	2075987
GCA_028335325.1	GCA_028335325.1_02381	aac(6)-I	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	183	183	100.00	99.45	183	WP_005880220.1	aminoglycoside N-acetyltransferase AAC(6)-Iih	NF000165.3	aminoglycoside 6-N-acetyltransferase	CP116581.1	2506215	2506766
GCA_028335325.1	GCA_028335325.1_02902	fexB	chloramphenicol/florfenicol efflux MFS transporter FexB	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	469	469	100.00	100.00	469	WP_002415211.1	chloramphenicol/florfenicol efflux MFS transporter FexB	NF040856.1	chloramphenicol/florfenicol efflux MFS transporter FexB	CP116582.1	16186	17595
GCA_028335325.1	GCA_028335325.1_02904	poxtA	ABC-F type ribosomal protection protein PoxtA	core	AMR	AMR	OXAZOLIDINONE/PHENICOL	CHLORAMPHENICOL/FLORFENICOL/LINEZOLID	EXACTP	542	542	100.00	100.00	542	WP_002415638.1	ABC-F type ribosomal protection protein PoxtA	NA	NA	CP116582.1	19817	21445
GCA_030180865.1	GCA_030180865.1_02269	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAMGTP010000007.1	46163	48082
GCA_000738175.1	GCA_000738175.1_00874	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.18	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCH01000027.1	186385	187239
GCA_000738175.1	GCA_000738175.1_00884	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JFCH01000027.1	194885	196306
GCA_000738175.1	GCA_000738175.1_01633	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JFCH01000051.1	2905	4686
GCA_000011265.1	GCA_000011265.1_00035	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	BA000033.2	39602	41608
GCA_000011265.1	GCA_000011265.1_00036	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	BA000033.2	41708	42694
GCA_000011265.1	GCA_000011265.1_00055	seh	staphylococcal enterotoxin type H	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	241	241	100.00	100.00	241	AAA19777.1	staphylococcal enterotoxin type H	NA	NA	BA000033.2	61524	62249
GCA_000011265.1	GCA_000011265.1_00112	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	450	450	100.00	100.00	450	WP_001100294.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	BA000033.2	129104	130456
GCA_000011265.1	GCA_000011265.1_00318	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.33	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	BA000033.2	360445	361800
GCA_000011265.1	GCA_000011265.1_00802	sec2	staphylococcal enterotoxin type C2	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	266	266	100.00	99.25	266	AAA26624.1	staphylococcal enterotoxin type C2	NA	NA	BA000033.2	851795	852595
GCA_000011265.1	GCA_000011265.1_00803	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	BA000033.2	852762	853484
GCA_000011265.1	GCA_000011265.1_01439	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	BA000033.2	1529381	1530358
GCA_000011265.1	GCA_000011265.1_01440	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	BA000033.2	1530360	1531298
GCA_000011265.1	GCA_000011265.1_01783	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.59	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BA000033.2	1868945	1870237
GCA_000011265.1	GCA_000011265.1_01822	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA	BA000033.2	1905276	1905998
GCA_000011265.1	GCA_000011265.1_01823	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	99.57	235	ABD31004.1	serine protease SplA	NA	NA	BA000033.2	1906123	1906830
GCA_000011265.1	GCA_000011265.1_01833	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	BA000033.2	1918479	1919462
GCA_000011265.1	GCA_000011265.1_01834	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	BA000033.2	1919464	1920399
GCA_000011265.1	GCA_000011265.1_01992	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	BA000033.2	2047408	2047758
GCA_000011265.1	GCA_000011265.1_01996	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	BA000033.2	2049256	2049747
GCA_000011265.1	GCA_000011265.1_02000	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	BA000033.2	2051456	2052229
GCA_000011265.1	GCA_000011265.1_02047	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	98.76	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	BA000033.2	2086148	2086876
GCA_000011265.1	GCA_000011265.1_02048	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	99.59	97.10	241	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	BA000033.2	2086900	2087628
GCA_000011265.1	GCA_000011265.1_02067	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	96.15	26	AGU62139.1	delta-hemolysin	NA	NA	BA000033.2	2107679	2107813
GCA_000011265.1	GCA_000011265.1_02212	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.38	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	BA000033.2	2257503	2258945
GCA_000011265.1	GCA_000011265.1_02462	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	BA000033.2	2491369	2492334
GCA_000011265.1	GCA_000011265.1_02463	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	BA000033.2	2492902	2493849
GCA_000011265.1	GCA_000011265.1_02464	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	BA000033.2	2493851	2494828
GCA_000011265.1	GCA_000011265.1_02684	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	BA000033.2	2730200	2731729
GCA_000011265.1	GCA_000011265.1_02718	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	BA000033.2	2775637	2776689
GCA_000011265.1	GCA_000011265.1_02742	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1183	1183	100.00	100.00	1183	BAB96477.1	collagen adhesin Cna	NA	NA	BA000033.2	2798376	2801927
GCA_015645265.1	GCA_015645265.1_01857	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JADOYK010000005.1	20136	21209
GCA_015645265.1	GCA_015645265.1_02000	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JADOYK010000006.1	60507	61796
GCA_015645265.1	GCA_015645265.1_02166	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JADOYK010000008.1	30562	31851
GCA_015645265.1	GCA_015645265.1_02167	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JADOYK010000008.1	31869	32270
GCA_015645265.1	GCA_015645265.1_02214	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JADOYK010000008.1	72522	74528
GCA_015645265.1	GCA_015645265.1_02427	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JADOYK010000012.1	17079	17459
GCA_015645265.1	GCA_015645265.1_02428	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JADOYK010000012.1	17449	19206
GCA_015645265.1	GCA_015645265.1_02429	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JADOYK010000012.1	19313	20158
GCA_015645265.1	GCA_015645265.1_02490	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JADOYK010000016.1	2216	3595
GCA_015645265.1	GCA_015645265.1_02500	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JADOYK010000019.1	191	1630
GCA_022484905.1	GCA_022484905.1_00599	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVEQ010000001.1	218358	218750
GCA_022484905.1	GCA_022484905.1_00600	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.54	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVEQ010000001.1	218768	220057
GCA_022484905.1	GCA_022484905.1_00604	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKVEQ010000001.1	222236	222583
GCA_022484905.1	GCA_022484905.1_01357	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKVEQ010000003.1	42151	42531
GCA_022484905.1	GCA_022484905.1_01358	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKVEQ010000003.1	42521	44278
GCA_022484905.1	GCA_022484905.1_01359	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKVEQ010000003.1	44385	45230
GCA_022484905.1	GCA_022484905.1_01374	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAKVEQ010000003.1	58616	60160
GCA_022484905.1	GCA_022484905.1_01375	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAKVEQ010000003.1	60344	60904
GCA_022484905.1	GCA_022484905.1_01380	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	BLASTP	299	299	100.00	99.67	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAKVEQ010000003.1	64368	65267
GCA_022484905.1	GCA_022484905.1_01381	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKVEQ010000003.1	65366	66832
GCA_009912715.1	GCA_009912715.1_00019	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	257	257	100.00	98.05	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP047791.1	20078	20851
GCA_009912715.1	GCA_009912715.1_00036	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP047791.1	35999	37354
GCA_009912715.1	GCA_009912715.1_00411	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP047791.1	400476	400790
GCA_009912715.1	GCA_009912715.1_00412	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP047791.1	400790	402079
GCA_009912715.1	GCA_009912715.1_00413	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP047791.1	402097	402492
GCA_009912715.1	GCA_009912715.1_00435	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	CP047791.1	421289	422722
GCA_009912715.1	GCA_009912715.1_01560	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP047791.1	1565820	1566200
GCA_009912715.1	GCA_009912715.1_01561	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP047791.1	1566190	1567947
GCA_009912715.1	GCA_009912715.1_01562	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP047791.1	1568054	1568899
GCA_009912715.1	GCA_009912715.1_01588	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP047791.1	1600721	1602013
GCA_009912715.1	GCA_009912715.1_01634	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.06	238	ABD30999.1	serine protease SplE	NA	NA	CP047791.1	1640878	1641594
GCA_009912715.1	GCA_009912715.1_01647	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP047791.1	1650577	1651332
GCA_009912715.1	GCA_009912715.1_01648	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP047791.1	1651371	1652156
GCA_009912715.1	GCA_009912715.1_01649	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP047791.1	1652310	1653038
GCA_009912715.1	GCA_009912715.1_01650	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.65	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP047791.1	1653073	1653792
GCA_009912715.1	GCA_009912715.1_01806	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP047791.1	1779837	1780187
GCA_009912715.1	GCA_009912715.1_01811	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP047791.1	1782402	1782893
GCA_009912715.1	GCA_009912715.1_01815	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	257	257	100.00	98.05	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP047791.1	1784602	1785375
GCA_009912715.1	GCA_009912715.1_01883	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	98.72	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	CP047791.1	1834094	1834798
GCA_009912715.1	GCA_009912715.1_01909	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP047791.1	1852552	1852686
GCA_009912715.1	GCA_009912715.1_02233	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP047791.1	2155339	2155758
GCA_009912715.1	GCA_009912715.1_02328	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP047791.1	2250003	2250968
GCA_009912715.1	GCA_009912715.1_02329	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP047791.1	2251518	2252465
GCA_009912715.1	GCA_009912715.1_02330	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP047791.1	2252467	2253444
GCA_009912715.1	GCA_009912715.1_02541	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP047791.1	2477353	2478882
GCA_009912715.1	GCA_009912715.1_02577	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP047791.1	2519991	2521043
GCA_009912715.1	GCA_009912715.1_02600	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.97	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP047791.1	2542342	2545893
GCA_009912715.1	GCA_009912715.1_02710	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP047791.1	2668051	2669409
GCA_000204335.2	GCA_000204335.2_01548	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	ACRY02000001.1	429814	431277
GCA_000204335.2	GCA_000204335.2_01549	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	ACRY02000001.1	431397	432614
GCA_001059955.1	GCA_001059955.1_00366	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JULV01000121.1	2386	4305
GCA_001059955.1	GCA_001059955.1_00682	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JULV01000129.1	1902	3683
GCA_001059955.1	GCA_001059955.1_01460	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JULV01000022.1	117	971
GCA_000428965.1	GCA_000428965.1_00201	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	83.74	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KE386824.1	197914	199392
GCA_022345765.1	GCA_022345765.1_01426	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	43.90	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKRDR010000002.1	213803	214171
GCA_022345765.1	GCA_022345765.1_01430	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.04	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRDR010000002.1	216604	218028
GCA_905372215.1	GCA_905372215.1_00661	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAJPOI010000015.1	12007	13386
GCA_000187585.1	GCA_000187585.1_00761	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	GL732463.1	731296	731724
GCA_000187585.1	GCA_000187585.1_01638	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	GL732463.1	1611595	1613514
GCA_000187585.1	GCA_000187585.1_01639	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	GL732463.1	1614439	1615176
GCA_024296065.1	GCA_024296065.1_01129	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPL010000003.1	178927	180390
GCA_024296065.1	GCA_024296065.1_01130	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPL010000003.1	180510	181727
GCA_031158565.1	GCA_031158565.1_00256	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAVIFB010000121.1	2035	2445
GCA_001837375.1	GCA_001837375.1_00807	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV832193.1	337554	339473
GCA_000759265.1	GCA_000759265.1_00832	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	97.97	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JRNP01000020.1	2298	4223
GCA_000759265.1	GCA_000759265.1_01843	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JRNP01000044.1	30981	31946
GCA_000759265.1	GCA_000759265.1_02080	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.16	266	WP_002682030.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JRNP01000053.1	3785	4585
GCA_014076475.1	GCA_014076475.1_02333	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	302	97.02	52.36	296	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP043573.1	2510664	2511569
GCA_014076475.1	GCA_014076475.1_02632	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP043573.1	2855124	2855579
GCA_014076475.1	GCA_014076475.1_02633	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP043573.1	2855651	2856001
GCA_014076475.1	GCA_014076475.1_02634	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	94.51	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP043573.1	2856017	2856292
GCA_014076475.1	GCA_014076475.1_02635	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	135	140	98.57	78.99	138	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP043573.1	2856320	2856727
GCA_014076475.1	GCA_014076475.1_02636	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	99.47	89.78	558	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP043573.1	2856766	2858448
GCA_014076475.1	GCA_014076475.1_02637	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP043573.1	2858466	2858831
GCA_014076475.1	GCA_014076475.1_02638	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	93.59	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP043573.1	2858828	2859064
GCA_014076475.1	GCA_014076475.1_03253	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	239	275	86.91	63.18	239	WP_268871878.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP043573.1	3530682	3531401
GCA_014076475.1	GCA_014076475.1_04992	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	69.85	136	WP_003082280.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP043573.1	5415564	5415974
GCA_014076475.1	GCA_014076475.1_05348	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP043574.1	55099	55950
GCA_014076475.1	GCA_014076475.1_05352	tet(G)	tetracycline efflux MFS transporter Tet(G)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	375	391	95.91	100.00	375	WP_001257840.1	tetracycline efflux MFS transporter Tet(G)	NF012192.0	tetracycline efflux MFS transporter Tet(G)	CP043574.1	59368	60495
GCA_014076475.1	GCA_014076475.1_05354	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP043574.1	61459	62295
GCA_014076475.1	GCA_014076475.1_05355	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP043574.1	62295	62714
GCA_014076475.1	GCA_014076475.1_05368	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP043574.1	72495	73334
GCA_014076475.1	GCA_014076475.1_05369	catB3	type B-3 chloramphenicol O-acetyltransferase CatB3	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	210	210	100.00	100.00	210	WP_000186237.1	type B-3 chloramphenicol O-acetyltransferase CatB3	NF000490.1	type B chloramphenicol O-acetyltransferase	CP043574.1	73832	74464
GCA_014076475.1	GCA_014076475.1_05372	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	184	184	100.00	100.00	184	WP_071846204.1	aminoglycoside 6-N-acetyltransferase	NF012165.0	aminoglycoside 6-N-acetyltransferase	CP043574.1	75325	75879
GCA_014076475.1	GCA_014076475.1_05382	mph(A)	Mph(A) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	301	301	100.00	100.00	301	WP_000219391.1	Mph(A) family macrolide 2-phosphotransferase	NF000254.1	Mph(A) family macrolide 2-phosphotransferase	CP043574.1	82235	83140
GCA_001856725.1	GCA_001856725.1_00254	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP017811.1	238837	240231
GCA_001856725.1	GCA_001856725.1_01799	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	97.56	43.33	120	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP017811.1	1803329	1803694
GCA_025145845.1	GCA_025145845.1_00807	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	97.82	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP102253.1	918402	920327
GCA_023110605.1	GCA_023110605.1_01477	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JALDWH010000003.1	247716	248453
GCA_023110605.1	GCA_023110605.1_01478	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALDWH010000003.1	249378	251297
GCA_003943285.1	GCA_003943285.1_01524	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RJPA01000010.1	68007	69926
GCA_003943285.1	GCA_003943285.1_02138	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJPA01000027.1	3441	4904
GCA_003943285.1	GCA_003943285.1_02139	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJPA01000027.1	5024	6241
GCA_001810035.1	GCA_001810035.1_00717	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV799674.1	32684	34603
GCA_019929785.1	GCA_019929785.1_00031	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHZQH010000001.1	33381	35300
GCA_019929785.1	GCA_019929785.1_00858	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JAHZQH010000014.1	3854	4504
GCA_019334725.1	GCA_019334725.1_00356	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP079818.1	330622	332541
GCA_019334725.1	GCA_019334725.1_00601	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP079818.1	582138	583778
GCA_000279835.1	GCA_000279835.1_00235	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	ALCS01000003.1	163147	164610
GCA_000279835.1	GCA_000279835.1_00236	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	ALCS01000003.1	164631	165848
GCA_000279835.1	GCA_000279835.1_01174	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	ALCS01000005.1	26995	28194
GCA_003494545.1	GCA_003494545.1_00075	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQHW01000001.1	83627	85021
GCA_018281725.1	GCA_018281725.1_02415	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	98.74	79.08	392	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP071973.1	2470841	2472034
GCA_018281725.1	GCA_018281725.1_03399	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	407	392	100.00	75.26	392	WP_430673475.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP071973.1	3446577	3447800
GCA_001281105.1	GCA_001281105.1_01737	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP012648.1	1732652	1734571
GCA_001281105.1	GCA_001281105.1_01738	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP012648.1	1735679	1736416
GCA_001807495.1	GCA_001807495.1_00806	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	98.44	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	KV789202.1	154690	156231
GCA_019602835.1	GCA_019602835.1_01345	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP080761.1	1382879	1384567
GCA_019602835.1	GCA_019602835.1_01346	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP080761.1	1384578	1384865
GCA_019602835.1	GCA_019602835.1_01722	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	302	97.68	56.81	301	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP080761.1	1769599	1770489
GCA_001465675.1	GCA_001465675.1_00046	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP013619.1	47565	49571
GCA_001465675.1	GCA_001465675.1_00060	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP013619.1	61555	62934
GCA_001465675.1	GCA_001465675.1_00143	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP013619.1	147628	148986
GCA_001465675.1	GCA_001465675.1_00339	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.67	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP013619.1	375428	376783
GCA_001465675.1	GCA_001465675.1_00935	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP013619.1	966863	968782
GCA_001465675.1	GCA_001465675.1_01589	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	279	250	100.00	96.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP013619.1	1664985	1665824
GCA_001465675.1	GCA_001465675.1_01641	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	524	524	100.00	99.81	524	WP_063856936.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP013619.1	1717248	1718822
GCA_001465675.1	GCA_001465675.1_01760	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP013619.1	1861142	1862434
GCA_001465675.1	GCA_001465675.1_01941	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP013619.1	2006101	2006481
GCA_001465675.1	GCA_001465675.1_01942	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP013619.1	2006471	2008228
GCA_001465675.1	GCA_001465675.1_01943	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP013619.1	2008335	2009180
GCA_001465675.1	GCA_001465675.1_01978	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP013619.1	2043677	2043811
GCA_001465675.1	GCA_001465675.1_02142	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP013619.1	2207634	2209076
GCA_001465675.1	GCA_001465675.1_02400	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP013619.1	2446878	2447843
GCA_001465675.1	GCA_001465675.1_02401	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP013619.1	2448411	2449358
GCA_001465675.1	GCA_001465675.1_02402	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP013619.1	2449360	2450337
GCA_001465675.1	GCA_001465675.1_02618	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP013619.1	2679374	2680903
GCA_001465675.1	GCA_001465675.1_02654	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	98.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP013619.1	2727692	2728744
GCA_020559625.1	GCA_020559625.1_00712	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	588	585	99.83	32.49	594	WP_000952923.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	JAJCLO010000011.1	78112	79878
GCA_020559625.1	GCA_020559625.1_00805	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	128	121	100.00	48.06	129	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAJCLO010000012.1	14179	14565
GCA_020559625.1	GCA_020559625.1_01978	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	229	232	99.14	66.96	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	JAJCLO010000002.1	127453	128142
GCA_020559625.1	GCA_020559625.1_03223	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAJCLO010000038.1	4971	6890
GCA_004368535.1	GCA_004368535.1_00457	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.34	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JTLY01000001.1	506274	507668
GCA_004368535.1	GCA_004368535.1_00765	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JTLY01000002.1	199476	201116
GCA_021491935.1	GCA_021491935.1_02147	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	98.74	79.08	392	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP090890.1	2242025	2243218
GCA_021491935.1	GCA_021491935.1_03034	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	407	392	100.00	75.51	392	WP_430673475.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP090890.1	3156407	3157630
GCA_001679335.1	GCA_001679335.1_01170	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LZPH01000027.1	205118	206512
GCA_000599605.1	GCA_000599605.1_00711	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	KK082660.1	41044	42009
GCA_000599605.1	GCA_000599605.1_00747	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	KK082661.1	11126	13051
GCA_000599605.1	GCA_000599605.1_00753	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	KK082661.1	18705	19505
GCA_030232125.1	GCA_030232125.1_02206	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	43.90	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASPJA010000007.1	107940	108308
GCA_030232125.1	GCA_030232125.1_02210	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPJA010000007.1	110743	112167
GCA_030232125.1	GCA_030232125.1_02365	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.30	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJA010000009.1	973	1827
GCA_030180985.1	GCA_030180985.1_02302	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JARWMR010000002.1	6359	7174
GCA_030180985.1	GCA_030180985.1_02303	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JARWMR010000002.1	7235	8038
GCA_030180985.1	GCA_030180985.1_02304	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JARWMR010000002.1	8038	8874
GCA_030180985.1	GCA_030180985.1_02305	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JARWMR010000002.1	9376	10236
GCA_963392945.1	GCA_963392945.1_00081	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJNW010000001.1	76090	77469
GCA_963392945.1	GCA_963392945.1_00326	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJNW010000002.1	110168	111031
GCA_963392945.1	GCA_963392945.1_00327	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJNW010000002.1	111048	112286
GCA_963392945.1	GCA_963392945.1_00712	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJNW010000005.1	22346	23872
GCA_963392945.1	GCA_963392945.1_01636	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJNW010000013.1	23460	24365
GCA_023109685.1	GCA_023109685.1_01176	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALGPT010000002.1	366319	368238
GCA_023109685.1	GCA_023109685.1_02091	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JALGPT010000008.1	5462	6199
GCA_019930705.1	GCA_019930705.1_00045	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP082856.1	42049	43443
GCA_000466585.1	GCA_000466585.1_00397	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	125	123	100.00	42.06	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KE993462.1	75361	75738
GCA_000466585.1	GCA_000466585.1_00627	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	494	99.60	67.28	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KE993464.1	51189	52667
GCA_000466585.1	GCA_000466585.1_03262	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	232	232	100.00	84.91	232	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	KE993501.1	120004	120702
GCA_000466585.1	GCA_000466585.1_03299	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	656	652	100.00	73.77	652	WP_012478245.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	KE993501.1	151645	153615
GCA_016903555.1	GCA_016903555.1_01515	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP069951.1	1517488	1517868
GCA_016903555.1	GCA_016903555.1_01516	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP069951.1	1517858	1519615
GCA_016903555.1	GCA_016903555.1_01517	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP069951.1	1519722	1520567
GCA_016903555.1	GCA_016903555.1_02219	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP069951.1	2239738	2240166
GCA_016903555.1	GCA_016903555.1_02293	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP069951.1	2322858	2324147
GCA_016903555.1	GCA_016903555.1_02312	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP069951.1	2343606	2344592
GCA_016903555.1	GCA_016903555.1_02313	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP069951.1	2344692	2346698
GCA_016903555.1	GCA_016903555.1_02443	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	PARTIALP	94	134	70.15	100.00	94	WP_001242578.1	bleomycin binding protein	NA	NA	CP069953.1	41	325
GCA_016903555.1	GCA_016903555.1_02450	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP069953.1	5670	6050
GCA_016903555.1	GCA_016903555.1_02451	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP069953.1	6040	7797
GCA_016903555.1	GCA_016903555.1_02452	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP069953.1	7904	8749
GCA_016903555.1	GCA_016903555.1_02455	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP069953.1	10096	11475
GCA_016903555.1	GCA_016903555.1_02460	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP069953.1	14541	16085
GCA_016903555.1	GCA_016903555.1_02477	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP069953.1	29857	30600
GCA_016903555.1	GCA_016903555.1_02481	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	522	522	100.00	99.81	522	WP_032492560.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP069952.1	3549	5117
GCA_016903555.1	GCA_016903555.1_02483	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003260.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP069950.1	25	759
GCA_025143865.1	GCA_025143865.1_02065	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALXWJ010000007.1	94764	95174
GCA_001560895.1	GCA_001560895.1_00942	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	CP014326.1	960395	960889
GCA_001560895.1	GCA_001560895.1_01066	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP014326.1	1094889	1096106
GCA_001560895.1	GCA_001560895.1_01067	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP014326.1	1096226	1097689
GCA_001560895.1	GCA_001560895.1_01072	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	CP014326.1	1099444	1099938
GCA_001560895.1	GCA_001560895.1_01074	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.75	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP014326.1	1101148	1103067
GCA_001560895.1	GCA_001560895.1_01098	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP014326.1	1123826	1124476
GCA_015262675.1	GCA_015262675.1_01075	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZSK010000020.1	13990	15186
GCA_001657915.1	GCA_001657915.1_01882	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	LXZX01000005.1	1839685	1841604
GCA_000971845.1	GCA_000971845.1_00396	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	42.28	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JYCR01000001.1	439328	439696
GCA_000971845.1	GCA_000971845.1_00704	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JYCR01000015.1	841	1644
GCA_000971845.1	GCA_000971845.1_00705	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JYCR01000015.1	1644	2480
GCA_000971845.1	GCA_000971845.1_00707	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JYCR01000015.1	2684	3859
GCA_000971845.1	GCA_000971845.1_00717	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	283	283	100.00	99.65	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JYCR01000018.1	1909	2760
GCA_000971845.1	GCA_000971845.1_00727	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JYCR01000019.1	6580	8499
GCA_000971845.1	GCA_000971845.1_01052	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JYCR01000020.1	585	1400
GCA_000971845.1	GCA_000971845.1_02331	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JYCR01000029.1	409	1263
GCA_000369385.1	GCA_000369385.1_00044	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001112624.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	KB849970.1	40364	41152
GCA_000369385.1	GCA_000369385.1_00159	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	KB849970.1	163961	164776
GCA_000369385.1	GCA_000369385.1_01227	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	397	397	100.00	100.00	397	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	KB849990.1	123314	124507
GCA_000369385.1	GCA_000369385.1_01414	blaADC-158	extended-spectrum class C beta-lactamase ADC-158	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	383	383	100.00	100.00	383	WP_001211227.1	extended-spectrum class C beta-lactamase ADC-158	NF000425.2	ADC family extended-spectrum class C beta-lactamase	KB849990.1	332966	334117
GCA_000369385.1	GCA_000369385.1_01827	amvA	multidrug efflux MFS transporter AmvA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	492	492	100.00	98.98	492	ACQ82816.1	multidrug efflux MFS transporter AmvA	NA	NA	KB849990.1	731453	732931
GCA_000369385.1	GCA_000369385.1_02382	blaOXA-98	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_001021777.1	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	NF000268.2	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase	KB849990.1	1317891	1318715
GCA_000369385.1	GCA_000369385.1_02629	abaF	fosfomycin efflux MFS transporter AbaF	plus	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	429	429	100.00	100.00	429	ABO11759.2	fosfomycin efflux MFS transporter AbaF	NA	NA	KB849990.1	1578967	1580256
GCA_000369385.1	GCA_000369385.1_02944	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	96.26	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KB849991.1	212915	214600
GCA_000369385.1	GCA_000369385.1_02945	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	KB849991.1	214639	215064
GCA_000369385.1	GCA_000369385.1_02947	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	91.67	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	KB849991.1	215803	216237
GCA_000369385.1	GCA_000369385.1_03504	nreB	nickel resistance MFS transporter NreB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	416	416	100.00	98.08	416	ADY84088.1	nickel resistance MFS transporter NreB	NA	NA	KB849992.1	30910	32160
GCA_026427535.1	GCA_026427535.1_00335	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP084444.1	335227	335646
GCA_026427535.1	GCA_026427535.1_00850	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP084444.1	863456	864529
GCA_026427535.1	GCA_026427535.1_00862	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP084444.1	875571	877577
GCA_026427535.1	GCA_026427535.1_01007	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084444.1	1030870	1032162
GCA_026427535.1	GCA_026427535.1_01154	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP084444.1	1178879	1179724
GCA_026427535.1	GCA_026427535.1_01155	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP084444.1	1179831	1181588
GCA_026427535.1	GCA_026427535.1_01156	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP084444.1	1181578	1181958
GCA_026427535.1	GCA_026427535.1_02596	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP084445.1	7442	8002
GCA_026427535.1	GCA_026427535.1_02597	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.22	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP084445.1	8186	9730
GCA_026427535.1	GCA_026427535.1_02620	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP084445.1	28391	29134
GCA_026427535.1	GCA_026427535.1_02621	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP084445.1	29351	29755
GCA_026427535.1	GCA_026427535.1_02625	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP084446.1	975	1709
GCA_002860765.1	GCA_002860765.1_00827	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	PKHZ01000001.1	873567	875030
GCA_002860765.1	GCA_002860765.1_00828	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	PKHZ01000001.1	875150	876367
GCA_000392875.1	GCA_000392875.1_00460	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	98.86	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	KB944589.1	186446	188560
GCA_000392875.1	GCA_000392875.1_02386	lsa(A)	ABC-F type ribosomal protection protein Lsa(A)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	EXACTP	498	498	100.00	100.00	498	WP_002411322.1	ABC-F type ribosomal protection protein Lsa(A)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KB944590.1	1408070	1409566
GCA_000800415.1	GCA_000800415.1_00212	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP009422.1	227593	228498
GCA_000800415.1	GCA_000800415.1_00343	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP009422.1	363712	364950
GCA_000800415.1	GCA_000800415.1_00344	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP009422.1	365358	365990
GCA_000800415.1	GCA_000800415.1_00346	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP009422.1	366815	368383
GCA_000800415.1	GCA_000800415.1_00547	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP009422.1	578326	579852
GCA_000800415.1	GCA_000800415.1_01623	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP009422.1	1656576	1657955
GCA_000955645.1	GCA_000955645.1_01241	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	ATMK01000008.1	105021	105821
GCA_000955645.1	GCA_000955645.1_02407	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	208	212	96.70	60.49	205	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	ATMK01000044.1	3251	3877
GCA_000027045.1	GCA_000027045.1_00047	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	FN433596.1	48631	49413
GCA_000027045.1	GCA_000027045.1_00048	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	FN433596.1	49539	50270
GCA_000027045.1	GCA_000027045.1_00063	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	128	128	100.00	100.00	128	ADA79992.1	mercuric transport protein MerT	NA	NA	FN433596.1	62757	63143
GCA_000027045.1	GCA_000027045.1_00064	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FN433596.1	63201	64844
GCA_000027045.1	GCA_000027045.1_00065	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	216	216	100.00	100.00	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	FN433596.1	64926	65576
GCA_000027045.1	GCA_000027045.1_00071	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	FN433596.1	69118	70497
GCA_000027045.1	GCA_000027045.1_00080	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.70	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	FN433596.1	76827	78833
GCA_000027045.1	GCA_000027045.1_00081	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	FN433596.1	78933	80690
GCA_000027045.1	GCA_000027045.1_00082	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	67	123	54.47	100.00	67	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NA	NA	FN433596.1	80690	80893
GCA_000027045.1	GCA_000027045.1_00157	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100289.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	FN433596.1	162173	163531
GCA_000027045.1	GCA_000027045.1_00419	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	FN433596.1	432860	434215
GCA_000027045.1	GCA_000027045.1_00458	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	FN433596.1	467388	467999
GCA_000027045.1	GCA_000027045.1_00484	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	FN433596.1	490602	492521
GCA_000027045.1	GCA_000027045.1_00494	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	FN433596.1	502263	502760
GCA_000027045.1	GCA_000027045.1_00946	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.17	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	FN433596.1	953580	954308
GCA_000027045.1	GCA_000027045.1_00947	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	242	242	100.00	100.00	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	FN433596.1	954332	955060
GCA_000027045.1	GCA_000027045.1_01686	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	FN433596.1	1722350	1723102
GCA_000027045.1	GCA_000027045.1_01741	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	FN433596.1	1776597	1777328
GCA_000027045.1	GCA_000027045.1_01742	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	FN433596.1	1777454	1778236
GCA_000027045.1	GCA_000027045.1_01868	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	FN433596.1	1924822	1926114
GCA_000027045.1	GCA_000027045.1_01913	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	FN433596.1	1964686	1965402
GCA_000027045.1	GCA_000027045.1_01916	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	FN433596.1	1967177	1967899
GCA_000027045.1	GCA_000027045.1_01917	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	FN433596.1	1968024	1968731
GCA_000027045.1	GCA_000027045.1_01927	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	FN433596.1	1979128	1980111
GCA_000027045.1	GCA_000027045.1_01928	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.36	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	FN433596.1	1980113	1981048
GCA_000027045.1	GCA_000027045.1_02088	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	FN433596.1	2109648	2109998
GCA_000027045.1	GCA_000027045.1_02092	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	FN433596.1	2111495	2111986
GCA_000027045.1	GCA_000027045.1_02096	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	FN433596.1	2113695	2114468
GCA_000027045.1	GCA_000027045.1_02173	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	FN433596.1	2171941	2172075
GCA_000027045.1	GCA_000027045.1_02224	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	FN433596.1	2209531	2210970
GCA_000027045.1	GCA_000027045.1_02230	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	FN433596.1	2214213	2215007
GCA_000027045.1	GCA_000027045.1_02472	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	FN433596.1	2451815	2453257
GCA_000027045.1	GCA_000027045.1_02647	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	FN433596.1	2605064	2605483
GCA_000027045.1	GCA_000027045.1_02734	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	FN433596.1	2694725	2695690
GCA_000027045.1	GCA_000027045.1_02735	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	FN433596.1	2696258	2697205
GCA_000027045.1	GCA_000027045.1_02736	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	FN433596.1	2697207	2698184
GCA_000027045.1	GCA_000027045.1_02808	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	910	1115	81.61	99.56	910	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	FN433596.1	2771593	2774325
GCA_000027045.1	GCA_000027045.1_02906	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	FN433596.1	2877632	2878012
GCA_000027045.1	GCA_000027045.1_02907	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	FN433596.1	2878002	2879759
GCA_000027045.1	GCA_000027045.1_02908	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	FN433596.1	2879866	2880711
GCA_000027045.1	GCA_000027045.1_02976	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	FN433596.1	2951543	2953072
GCA_000027045.1	GCA_000027045.1_03011	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	294	350	81.71	98.95	286	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	FN433596.1	2995401	2996285
GCA_000027045.1	GCA_000027045.1_03062	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	216	216	100.00	100.00	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	FN433597.1	1	651
GCA_000027045.1	GCA_000027045.1_03080	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	FN433597.1	14049	15593
GCA_000027045.1	GCA_000027045.1_03081	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	FN433597.1	15777	16337
GCA_000027045.1	GCA_000027045.1_03088	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	EXACTP	122	122	100.00	100.00	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	FN433597.1	21191	21559
GCA_000027045.1	GCA_000027045.1_03095	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	128	128	100.00	100.00	128	ADA79992.1	mercuric transport protein MerT	NA	NA	FN433597.1	27417	27803
GCA_000027045.1	GCA_000027045.1_03096	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	547	547	99.82	100.00	546	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FN433597.1	27861	29504
GCA_016466415.2	GCA_016466415.2_03750	blaOXA	OXA-22 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	275	274	99.64	96.70	273	WP_063861776.1	benzylpenicillin-hydrolyzing class D beta-lactamase OXA-22	NF033509.1	OXA-22 family class D beta-lactamase	CP066772.2	530066	530893
GCA_016466415.2	GCA_016466415.2_03909	blaOXA	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	271	271	100.00	98.15	271	WP_063864500.1	carbapenem-hydrolyzing class D beta-lactamase OXA-60	NF000395.3	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	CP066772.2	704054	704869
GCA_016466415.2	GCA_016466415.2_04272	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP066772.2	1105739	1106173
GCA_016466415.2	GCA_016466415.2_04273	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP066772.2	1106245	1106595
GCA_016466415.2	GCA_016466415.2_04274	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP066772.2	1106608	1106883
GCA_016466415.2	GCA_016466415.2_04275	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP066772.2	1106955	1108640
GCA_016466415.2	GCA_016466415.2_04276	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP066772.2	1108658	1109023
GCA_016466415.2	GCA_016466415.2_04277	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP066772.2	1109020	1109256
GCA_018128365.1	GCA_018128365.1_00741	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	284	98.94	55.87	281	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP072385.1	828480	829328
GCA_000144405.1	GCA_000144405.1_00112	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP002122.1	156847	158037
GCA_000144405.1	GCA_000144405.1_02481	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP002123.1	1307338	1307664
GCA_020097655.1	GCA_020097655.1_01749	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	148	148	100.00	95.27	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP083648.1	1859155	1859601
GCA_020097655.1	GCA_020097655.1_01761	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP083648.1	1864928	1866349
GCA_019703635.1	GCA_019703635.1_01509	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AP018775.1	1510898	1512538
GCA_019703635.1	GCA_019703635.1_01564	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018775.1	1573245	1574639
GCA_001812015.1	GCA_001812015.1_00692	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV807489.1	12299	13762
GCA_001812015.1	GCA_001812015.1_00693	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV807489.1	13882	15099
GCA_001812015.1	GCA_001812015.1_00872	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KV807489.1	178086	178514
GCA_001812015.1	GCA_001812015.1_01787	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.84	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	KV807499.1	280419	282155
GCA_001812015.1	GCA_001812015.1_01788	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.91	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	KV807499.1	282157	283881
GCA_900635155.1	GCA_900635155.1_00885	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	LR134002.1	874158	874586
GCA_023383645.1	GCA_023383645.1_00055	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AYHB01000004.1	29353	31272
GCA_012030345.1	GCA_012030345.1_02163	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAAUVV010000007.1	31230	32084
GCA_012030345.1	GCA_012030345.1_02166	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	589	547	79.52	43.72	446	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAAUVV010000007.1	33465	35234
GCA_012030345.1	GCA_012030345.1_02178	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	148	148	100.00	95.95	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JAAUVV010000007.1	40562	41008
GCA_001811205.1	GCA_001811205.1_00304	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV803855.1	224797	225651
GCA_001811205.1	GCA_001811205.1_01886	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV803877.1	54	1835
GCA_963394925.1	GCA_963394925.1_00639	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.66	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPN010000003.1	78714	79952
GCA_963394925.1	GCA_963394925.1_00985	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPN010000005.1	65617	66996
GCA_963394925.1	GCA_963394925.1_01402	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.24	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPN010000008.1	55896	57422
GCA_900187225.1	GCA_900187225.1_00279	inlG	class 1 internalin InlG	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	490	490	100.00	100.00	490	AEO05269.1	class 1 internalin InlG	NA	NA	LT906436.1	273782	275254
GCA_900187225.1	GCA_900187225.1_00280	inlC	class 1 internalin InlC2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	548	548	100.00	100.00	548	AAB67969.1	class 1 internalin InlC2	NA	NA	LT906436.1	275392	277038
GCA_900187225.1	GCA_900187225.1_00281	inlD	class 1 internalin InlD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	567	567	100.00	100.00	567	AAB67970.1	class 1 internalin InlD	NA	NA	LT906436.1	277246	278949
GCA_900187225.1	GCA_900187225.1_00282	inlE	class 1 internalin InlE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	499	499	100.00	99.40	499	CAA07458.1	class 1 internalin InlE	NA	NA	LT906436.1	279158	280657
GCA_900187225.1	GCA_900187225.1_00359	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1778	1778	100.00	99.66	1778	AEO24631.1	class 1 internalin InlI	NA	NA	LT906436.1	359126	364462
GCA_900187225.1	GCA_900187225.1_00438	inlF	class 1 internalin InlF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	821	821	100.00	99.51	821	AEO24707.1	class 1 internalin InlF	NA	NA	LT906436.1	428072	430537
GCA_900187225.1	GCA_900187225.1_00462	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	36.67	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA	LT906436.1	452986	455388
GCA_900187225.1	GCA_900187225.1_00463	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	99.21	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA	LT906436.1	455473	457365
GCA_900187225.1	GCA_900187225.1_00466	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	95.12	205	AEO24735.1	nuclear targeted protein LntA	NA	NA	LT906436.1	459036	459653
GCA_900187225.1	GCA_900187225.1_00475	gadD1	glutamate decarboxylase GadD1	plus	STRESS	ACID	NA	NA	BLASTP	462	462	100.00	99.78	462	CAC98526.1	glutamate decarboxylase GadD1	NA	NA	LT906436.1	471285	472673
GCA_900187225.1	GCA_900187225.1_00538	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	611	605	100.00	98.36	611	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA	LT906436.1	526867	528702
GCA_900187225.1	GCA_900187225.1_00640	inl-lmo0610	lmo0610 family class 1 internalin Inl-lmo0610	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	589	589	100.00	99.15	589	AEO24908.1	lmo0610 family class 1 internalin Inl-lmo0610	NA	NA	LT906436.1	630713	632482
GCA_900187225.1	GCA_900187225.1_00966	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	98.28	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein	LT906436.1	937021	938592
GCA_900187225.1	GCA_900187225.1_01127	aut	peptidoglycan hydrolase Auto	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	572	572	100.00	100.00	572	ADB67911.1	peptidoglycan hydrolase Auto	NA	NA	LT906436.1	1087039	1088757
GCA_900187225.1	GCA_900187225.1_01336	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	598	598	100.00	99.33	598	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK	LT906436.1	1273866	1275662
GCA_900187225.1	GCA_900187225.1_01792	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	133	133	100.00	95.49	133	WP_010989789.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	LT906436.1	1723260	1723661
GCA_900187225.1	GCA_900187225.1_01880	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	100.00	296	AHJ03495.1	class 3 internalin InlC	NA	NA	LT906436.1	1816019	1816912
GCA_900187225.1	GCA_900187225.1_02133	inlL	class 1 internalin InlL	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	626	626	100.00	100.00	626	CDG45949.1	class 1 internalin InlL	NA	NA	LT906436.1	2062032	2063912
GCA_900187225.1	GCA_900187225.1_02551	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	383	388	98.71	99.74	383	AEO26812.1	class 3 internalin InlP	NA	NA	LT906436.1	2459941	2461092
GCA_900187225.1	GCA_900187225.1_02641	ami	autolysin Ami	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	917	917	100.00	99.56	917	ASH48222.1	autolysin Ami	NA	NA	LT906436.1	2550826	2553579
GCA_022835275.1	GCA_022835275.1_00937	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	98.36	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	BQNZ01000001.1	1003098	1003832
GCA_022835275.1	GCA_022835275.1_01415	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	BQNZ01000001.1	1569153	1570118
GCA_015552565.1	GCA_015552565.1_01333	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JADNFA010000003.1	91333	91761
GCA_015552565.1	GCA_015552565.1_01676	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADNFA010000054.1	7304	8521
GCA_015552565.1	GCA_015552565.1_01677	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADNFA010000054.1	8641	10104
GCA_000163035.1	GCA_000163035.1_02442	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	GG740010.1	229458	230648
GCA_000163035.1	GCA_000163035.1_02616	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	GG740010.1	461667	462467
GCA_000200475.1	GCA_000200475.1_01829	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	94.83	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	FQ670204.1	1732714	1734108
GCA_000763765.1	GCA_000763765.1_01432	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JPVS01000009.1	5731	7371
GCA_000724775.3	GCA_000724775.3_00266	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP010820.1	269203	270843
GCA_000724775.3	GCA_000724775.3_00294	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	123	85.37	52.38	105	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP010820.1	300275	300634
GCA_000724775.3	GCA_000724775.3_00327	msr	Msr family ABC-F type ribosomal protection protein	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	482	485	99.18	71.73	481	WP_101035417.1	Msr family ABC-F type ribosomal protection protein	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP010820.1	334206	335654
GCA_000724775.3	GCA_000724775.3_00419	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	141	140	100.00	75.71	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP010820.1	412393	412818
GCA_000724775.3	GCA_000724775.3_02417	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	215	100.00	68.37	215	WP_035203840.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP010820.1	2315450	2316097
GCA_000724775.3	GCA_000724775.3_02474	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	81.30	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP010820.1	2370832	2372310
GCA_000724775.3	GCA_000724775.3_02918	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	144	100.00	54.86	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP010820.1	2787124	2787558
GCA_000724775.3	GCA_000724775.3_03289	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	123	85.37	52.38	105	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP010820.1	3145067	3145426
GCA_000724775.3	GCA_000724775.3_03589	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	228	232	98.71	72.61	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CP010820.1	3437973	3438659
GCA_913778555.1	GCA_913778555.1_00829	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CAJYUT010000045.1	693	929
GCA_913778555.1	GCA_913778555.1_00830	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	98.35	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CAJYUT010000045.1	926	1291
GCA_913778555.1	GCA_913778555.1_00831	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	548	561	100.00	85.38	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAJYUT010000045.1	1308	2954
GCA_913778555.1	GCA_913778555.1_00832	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	81	81	100.00	100.00	81	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	CAJYUT010000045.1	2951	3196
GCA_913778555.1	GCA_913778555.1_00833	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	98.90	93.33	90	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CAJYUT010000045.1	3199	3474
GCA_913778555.1	GCA_913778555.1_00834	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	AAA98222.1	mercuric transport protein MerT	NA	NA	CAJYUT010000045.1	3490	3840
GCA_913778555.1	GCA_913778555.1_00835	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	94.44	144	AAC38229.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CAJYUT010000045.1	3912	4346
GCA_018138085.1	GCA_018138085.1_02242	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	409	414	92.51	75.00	384	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP073105.1	2384554	2385783
GCA_018138085.1	GCA_018138085.1_04526	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	387	396	95.71	57.26	379	WP_280147732.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP073105.1	4861846	4863009
GCA_030515875.1	GCA_030515875.1_02415	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100373.1	2478924	2479778
GCA_003349825.1	GCA_003349825.1_00902	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	309	147	93.88	44.20	138	ABG05788.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	QQAP01000002.1	269320	270249
GCA_003349825.1	GCA_003349825.1_03232	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	97.68	50.17	303	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	QQAP01000012.1	38427	39326
GCA_003349825.1	GCA_003349825.1_03422	aac(3)-I	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	158	156	91.03	66.90	142	WP_034006142.1	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	QQAP01000014.1	59286	59762
GCA_003349825.1	GCA_003349825.1_03622	aadA6	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA6	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	281	281	100.00	100.00	281	WP_022675713.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA6	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	QQAP01000019.1	16024	16869
GCA_027497885.1	GCA_027497885.1_00377	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAJNRZ010000001.1	373320	374537
GCA_027497885.1	GCA_027497885.1_00378	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAJNRZ010000001.1	374657	376120
GCA_027497885.1	GCA_027497885.1_00523	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JAJNRZ010000001.1	540097	541296
GCA_030295285.1	GCA_030295285.1_00072	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	148	120	100.00	48.39	124	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP026710.1	92227	92673
GCA_030295285.1	GCA_030295285.1_01010	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	130	120	100.00	48.85	131	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP026710.1	1172499	1172891
GCA_030295285.1	GCA_030295285.1_01883	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	AP026711.1	199	2118
GCA_030295285.1	GCA_030295285.1_01888	erm(50)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(50)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	CLARITHROMYCIN/CLINDAMYCIN	EXACTP	263	263	100.00	100.00	263	WP_176453837.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(50)	NF000499.2	23S ribosomal RNA methyltransferase Erm	AP026711.1	6589	7380
GCA_016028755.1	GCA_016028755.1_00267	icr-Mo	phosphoethanolamine--lipid A transferase ICR-Mo	plus	AMR	AMR	COLISTIN	COLISTIN	BLASTP	548	558	98.21	100.00	548	WP_082741435.1	phosphoethanolamine--lipid A transferase ICR-Mo	NA	NA	CP065751.1	299343	300989
GCA_011058775.1	GCA_011058775.1_00930	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	87.40	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP049230.1	954941	956419
GCA_025617355.1	GCA_025617355.1_00157	blaL1	L1 family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	307	290	100.00	99.66	290	WP_032966056.1	L1 family subclass B3 metallo-beta-lactamase	NF033106.1	L1 family subclass B3 metallo-beta-lactamase	JAOAOH010000001.1	180909	181832
GCA_025617355.1	GCA_025617355.1_00338	copA	laccase-like oxidase CopA	plus	STRESS	METAL	COPPER	COPPER	PARTIALP	556	623	89.25	99.28	556	ADR70747.1	laccase-like oxidase CopA	NA	NA	JAOAOH010000001.1	377711	379381
GCA_025617355.1	GCA_025617355.1_00339	copB	copper-binding protein CopB	plus	STRESS	METAL	COPPER	COPPER	EXACTP	422	422	100.00	100.00	422	ADR70748.1	copper-binding protein CopB	NA	NA	JAOAOH010000001.1	379378	380646
GCA_025617355.1	GCA_025617355.1_00411	aph(6)	APH(6) family putative aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	270	270	99.63	98.88	269	WP_012480135.1	APH(6) family putative aminoglycoside O-phosphotransferase	NF012160.0	APH(6) family putative aminoglycoside O-phosphotransferase	JAOAOH010000001.1	453646	454458
GCA_025617355.1	GCA_025617355.1_00615	aph(3)-IIc	aminoglycoside O-phosphotransferase APH(3)-IIc	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	314	267	93.63	99.60	250	WP_012479999.1	aminoglycoside O-phosphotransferase APH(3)-IIc	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	JAOAOH010000001.1	684124	685068
GCA_025617355.1	GCA_025617355.1_01665	aac(6)-Iz	aminoglycoside N-acetyltransferase AAC(6)-Iz	core	AMR	AMR	AMINOGLYCOSIDE	TOBRAMYCIN	EXACTP	153	153	100.00	100.00	153	WP_024956926.1	aminoglycoside N-acetyltransferase AAC(6)-Iz	NF000138.1	aminoglycoside N-acetyltransferase AAC(6)-Iz	JAOAOH010000015.1	115697	116158
GCA_025617355.1	GCA_025617355.1_03349	smeF	multidrug efflux RND transporter outer membrane subunit SmeF	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	461	466	98.71	98.26	460	CAC14596.1	multidrug efflux RND transporter outer membrane subunit SmeF	NA	NA	JAOAOH010000004.1	147729	149114
GCA_025617355.1	GCA_025617355.1_03518	emrC	multidrug efflux transporter outer membrane subunit EmrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	497	497	100.00	98.39	497	CAQ45062.1	multidrug efflux transporter outer membrane subunit EmrC	NA	NA	JAOAOH010000005.1	52170	53663
GCA_025617355.1	GCA_025617355.1_03519	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	393	393	100.00	100.00	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	JAOAOH010000005.1	53675	54856
GCA_025617355.1	GCA_025617355.1_03520	emrB	multidrug efflux MFS transporter permease subunit EmrB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	528	528	100.00	99.81	528	CAQ45064.1	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	JAOAOH010000005.1	54864	56450
GCA_025617355.1	GCA_025617355.1_03842	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	50.00	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JAOAOH010000006.1	105692	105967
GCA_025617355.1	GCA_025617355.1_04348	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	304	100.00	70.72	304	WP_063842700.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAOAOH010000008.1	133284	134195
GCA_006149185.1	GCA_006149185.1_00036	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	321	321	99.07	83.65	318	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP040468.1	55972	56937
GCA_006149185.1	GCA_006149185.1_00230	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.25	266	WP_063844771.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP040468.1	298664	299464
GCA_006149185.1	GCA_006149185.1_01705	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP040468.1	1955134	1957059
GCA_003492385.1	GCA_003492385.1_00830	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQMI01000002.1	381191	382096
GCA_003492385.1	GCA_003492385.1_01665	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.36	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQMI01000007.1	68600	69838
GCA_003492385.1	GCA_003492385.1_01850	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQMI01000010.1	14281	15807
GCA_019815145.1	GCA_019815145.1_01406	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAIMJJ010000033.1	276577	277794
GCA_019815145.1	GCA_019815145.1_01407	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAIMJJ010000033.1	277914	279377
GCA_019815145.1	GCA_019815145.1_01804	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAIMJJ010000042.1	6158	8077
GCA_001838365.1	GCA_001838365.1_00636	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	KV836379.1	31912	33291
GCA_000800235.1	GCA_000800235.1_00350	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP009418.1	319043	320422
GCA_000800235.1	GCA_000800235.1_01418	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP009418.1	1407897	1409423
GCA_000800235.1	GCA_000800235.1_01619	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP009418.1	1619229	1620797
GCA_000800235.1	GCA_000800235.1_01621	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP009418.1	1621620	1622252
GCA_000800235.1	GCA_000800235.1_01622	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.06	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP009418.1	1622656	1623894
GCA_000800235.1	GCA_000800235.1_01751	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP009418.1	1759273	1760178
GCA_000221525.2	GCA_000221525.2_01057	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AFTX01000028.1	20269	21342
GCA_000221525.2	GCA_000221525.2_01322	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AFTX01000025.1	17269	18558
GCA_000221525.2	GCA_000221525.2_01323	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	AFTX01000025.1	18576	18977
GCA_000221525.2	GCA_000221525.2_01783	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AFTX01000015.1	60333	61622
GCA_000221525.2	GCA_000221525.2_02443	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	401	459	87.36	100.00	401	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012175.1	Tet(L)/Tet(K)/Tet(45) family tetracycline efflux MFS transporter	AFTX01000005.1	3360	4565
GCA_025151785.1	GCA_025151785.1_00401	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	561	83.24	42.53	475	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXVS010000115.1	482	1882
GCA_025151785.1	GCA_025151785.1_00846	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.85	41.31	472	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXVS010000152.1	3588	4982
GCA_000009045.1	GCA_000009045.1_00262	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	267	268	99.63	62.59	270	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	AL009126.3	228549	229352
GCA_000009045.1	GCA_000009045.1_00304	mphK	macrolide 2-phosphotransferase MphK	core	AMR	AMR	MACROLIDE	TELITHROMYCIN/TYLOSIN	EXACTP	306	306	100.00	100.00	306	WP_003246254.1	macrolide 2-phosphotransferase MphK	NA	NA	AL009126.3	275838	276758
GCA_000009045.1	GCA_000009045.1_00644	vmlR	ABC-F type ribosomal protection protein VmlR	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOMYCIN/TIAMULIN/VIRGINIAMYCIN M	EXACTP	547	547	100.00	100.00	547	WP_003234144.1	ABC-F type ribosomal protection protein VmlR	NA	NA	AL009126.3	604736	606379
GCA_000009045.1	GCA_000009045.1_01962	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	144	140	100.00	75.00	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	AL009126.3	1916663	1917097
GCA_000009045.1	GCA_000009045.1_02067	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	309	98.06	66.99	306	WP_011053164.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	AL009126.3	2048533	2049453
GCA_000009045.1	GCA_000009045.1_02808	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	139	139	100.00	100.00	139	CAB14519.1	thioredoxin-dependent arsenate reductase	NA	NA	AL009126.3	2655322	2655741
GCA_000009045.1	GCA_000009045.1_02809	acr3	arsenite efflux transporter Acr3	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	346	346	100.00	100.00	346	CAB14520.2	arsenite efflux transporter Acr3	NA	NA	AL009126.3	2655753	2656793
GCA_000009045.1	GCA_000009045.1_02911	aadK	aminoglycoside 6-adenylyltransferase AadK	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	284	284	100.00	100.00	284	WP_003229862.1	aminoglycoside 6-adenylyltransferase AadK	NF000312.1	aminoglycoside 6-adenylyltransferase AadK	AL009126.3	2735682	2736536
GCA_000009045.1	GCA_000009045.1_04401	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	173	173	100.00	100.00	173	WP_003242546.1	streptothricin N-acetyltransferase SatA	NA	NA	AL009126.3	4185160	4185681
GCA_000009045.1	GCA_000009045.1_04404	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_003242953.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	AL009126.3	4187681	4189057
GCA_011403135.1	GCA_011403135.1_00024	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AP021848.1	26830	27903
GCA_011403135.1	GCA_011403135.1_00052	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	AP021848.1	55252	57258
GCA_011403135.1	GCA_011403135.1_00240	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP021848.1	263430	264722
GCA_011403135.1	GCA_011403135.1_00387	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AP021848.1	411439	412284
GCA_011403135.1	GCA_011403135.1_00388	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AP021848.1	412391	414148
GCA_011403135.1	GCA_011403135.1_00389	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AP021848.1	414138	414518
GCA_011403135.1	GCA_011403135.1_01126	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	AP021848.1	1151391	1152830
GCA_011403135.1	GCA_011403135.1_02166	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AP021848.1	2183708	2184127
GCA_900475315.1	GCA_900475315.1_00033	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.64	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	LS483369.1	31280	32806
GCA_900475315.1	GCA_900475315.1_00459	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	LS483369.1	435653	437032
GCA_900475315.1	GCA_900475315.1_01194	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.66	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	LS483369.1	1195183	1196421
GCA_024294625.1	GCA_024294625.1_00210	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCON010000001.1	205641	206858
GCA_024294625.1	GCA_024294625.1_00211	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCON010000001.1	206978	208441
GCA_024294625.1	GCA_024294625.1_00216	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCON010000001.1	210182	210610
GCA_024294625.1	GCA_024294625.1_01090	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCON010000003.1	111454	113178
GCA_024294625.1	GCA_024294625.1_01091	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCON010000003.1	113180	114916
GCA_024294625.1	GCA_024294625.1_01408	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCON010000004.1	180663	182582
GCA_024294625.1	GCA_024294625.1_01682	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCON010000005.1	226535	228430
GCA_000312505.3	GCA_000312505.3_00435	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	HG326225.1	74204	76123
GCA_000807675.2	GCA_000807675.2_00926	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	128	121	100.00	48.06	129	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP019962.1	939279	939665
GCA_000807675.2	GCA_000807675.2_03054	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	229	232	99.14	66.52	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CP019962.1	3130086	3130775
GCA_000807675.2	GCA_000807675.2_03055	vanS	vancomycin resistance histidine kinase VanS	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	373	392	93.88	53.62	373	WP_011461302.1	vancomycin resistance histidine kinase VanS	NF033091.0	vancomycin resistance histidine kinase VanS	CP019962.1	3130768	3131889
GCA_023547085.1	GCA_023547085.1_00036	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP097512.1	40157	42163
GCA_023547085.1	GCA_023547085.1_00037	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP097512.1	42263	43249
GCA_023547085.1	GCA_023547085.1_00067	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP097512.1	73486	74775
GCA_023547085.1	GCA_023547085.1_00070	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP097512.1	76953	77300
GCA_023547085.1	GCA_023547085.1_00147	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP097512.1	159788	160024
GCA_023547085.1	GCA_023547085.1_00198	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP097512.1	217805	218872
GCA_023547085.1	GCA_023547085.1_00697	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP097512.1	738368	738928
GCA_023547085.1	GCA_023547085.1_00698	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP097512.1	739112	740656
GCA_023547085.1	GCA_023547085.1_00708	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP097512.1	750009	751475
GCA_023547085.1	GCA_023547085.1_00711	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP097512.1	753277	753657
GCA_023547085.1	GCA_023547085.1_00712	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP097512.1	753647	755404
GCA_023547085.1	GCA_023547085.1_00713	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP097512.1	755511	756356
GCA_023547085.1	GCA_023547085.1_00726	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP097512.1	768114	769553
GCA_023547085.1	GCA_023547085.1_00908	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP097512.1	932085	932726
GCA_023547085.1	GCA_023547085.1_00929	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP097512.1	951546	952391
GCA_023547085.1	GCA_023547085.1_00930	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	91.62	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP097512.1	952498	954255
GCA_023547085.1	GCA_023547085.1_00931	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP097512.1	954245	954625
GCA_023547085.1	GCA_023547085.1_01492	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP097512.1	1485726	1486211
GCA_023547085.1	GCA_023547085.1_02594	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP097513.1	5954	9028
GCA_946892435.1	GCA_946892435.1_00342	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CAMPOS010000002.1	177672	179591
GCA_000242235.1	GCA_000242235.1_01765	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_003505402.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JH590864.1	56232	58151
GCA_000242235.1	GCA_000242235.1_02036	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JH590865.1	47722	49641
GCA_019703455.1	GCA_019703455.1_01558	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018768.1	1564223	1565617
GCA_030229765.1	GCA_030229765.1_00189	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPGY010000013.1	11256	12698
GCA_030229765.1	GCA_030229765.1_00246	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPGY010000018.1	2274	3128
GCA_003943465.1	GCA_003943465.1_00783	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420317.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJPR01000002.1	285712	287175
GCA_003943465.1	GCA_003943465.1_00784	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.51	405	WP_000417517.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJPR01000002.1	287295	288512
GCA_018128185.1	GCA_018128185.1_02387	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072373.1	2862500	2863696
GCA_005890525.1	GCA_005890525.1_00764	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	99.73	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQJ01000167.1	28826	29959
GCA_003999875.1	GCA_003999875.1_00055	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RQVJ01000001.1	52134	54053
GCA_023109865.1	GCA_023109865.1_00533	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDVB010000001.1	521881	523098
GCA_023109865.1	GCA_023109865.1_00534	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDVB010000001.1	523218	524681
GCA_030232305.1	GCA_030232305.1_00321	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JASPJQ010000014.1	45959	46405
GCA_030232305.1	GCA_030232305.1_00446	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJQ010000017.1	40355	41209
GCA_030232305.1	GCA_030232305.1_00945	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPJQ010000025.1	3138	4559
GCA_013137955.1	GCA_013137955.1_00675	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP053477.1	706600	707892
GCA_013137955.1	GCA_013137955.1_01149	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP053477.1	1156781	1158220
GCA_013137955.1	GCA_013137955.1_01153	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP053477.1	1161783	1162280
GCA_013137955.1	GCA_013137955.1_02527	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP053472.1	15449	16828
GCA_013137955.1	GCA_013137955.1_02534	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP053472.1	21125	21868
GCA_013137955.1	GCA_013137955.1_02535	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP053472.1	22085	22489
GCA_013137955.1	GCA_013137955.1_02538	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP053472.1	25499	26344
GCA_013137955.1	GCA_013137955.1_02539	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP053472.1	26451	28208
GCA_013137955.1	GCA_013137955.1_02540	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP053472.1	28198	28578
GCA_013137955.1	GCA_013137955.1_02543	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP053472.1	30383	31849
GCA_013137955.1	GCA_013137955.1_02556	catA	type A-8 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	PARTIALP	139	215	64.65	99.28	139	WP_002352254.1	type A-8 chloramphenicol O-acetyltransferase	NA	NA	CP053474.1	6	425
GCA_013137955.1	GCA_013137955.1_02560	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_001829870.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CP053475.1	1015	1500
GCA_013137955.1	GCA_013137955.1_02562	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CP053476.1	925	1410
GCA_001866625.1	GCA_001866625.1_02344	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LLJI01000008.1	2095	2505
GCA_030515695.1	GCA_030515695.1_02298	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP100364.1	2482304	2483155
GCA_030515695.1	GCA_030515695.1_02307	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.07	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100364.1	2491037	2491891
GCA_030515695.1	GCA_030515695.1_02319	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP100364.1	2506577	2507752
GCA_000968335.1	GCA_000968335.1_01507	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	98.06	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP008740.1	1444408	1445802
GCA_000239695.1	GCA_000239695.1_01689	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	640	100.00	99.53	640	WP_063856422.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JH470339.1	154431	156353
GCA_001811025.1	GCA_001811025.1_00891	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV803451.1	30221	32140
GCA_001811025.1	GCA_001811025.1_00896	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV803451.1	33865	35328
GCA_001811025.1	GCA_001811025.1_00897	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV803451.1	35448	36665
GCA_902477885.1	GCA_902477885.1_00736	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.70	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CABSIY010000019.1	1122	2600
GCA_900460465.1	GCA_900460465.1_01424	ymoA	expression modulating protein YmoA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	67	67	100.00	100.00	67	AAQ90017.1	expression modulating protein YmoA	NA	NA	UAVH01000001.1	1285689	1285892
GCA_900460465.1	GCA_900460465.1_03866	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	94	102	97.06	49.53	107	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	UAVH01000007.1	168578	168862
GCA_900460465.1	GCA_900460465.1_03996	yfeD	iron/manganese ABC transporter permease subunit YfeD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	297	100.00	99.66	297	AAC46150.1	iron/manganese ABC transporter permease subunit YfeD	NA	NA	UAVH01000007.1	306141	307034
GCA_900460465.1	GCA_900460465.1_03998	yfeB	iron/manganese ABC transporter ATP-binding protein YfeB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	296	296	100.00	100.00	296	AAC46148.1	iron/manganese ABC transporter ATP-binding protein YfeB	NA	NA	UAVH01000007.1	307915	308805
GCA_900460465.1	GCA_900460465.1_03999	yfeA	iron/manganese ABC transporter substrate-binding protein YfeA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	322	322	100.00	100.00	322	AAC46147.1	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	UAVH01000007.1	308802	309770
GCA_900460465.1	GCA_900460465.1_04233	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	121	102	100.00	52.46	122	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	UAVH01000007.1	542611	542976
GCA_900460465.1	GCA_900460465.1_04553	yopT	T3SS effector cysteine protease YopT	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	322	322	100.00	92.55	322	AJJ21466.1	T3SS effector cysteine protease YopT	NA	NA	UAVH01000010.1	754	1722
GCA_900460465.1	GCA_900460465.1_04566	yopE	type III secretion system effector GTPase activator YopE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	219	219	100.00	94.06	219	AJJ21471.1	type III secretion system effector GTPase activator YopE	NA	NA	UAVH01000010.1	10073	10732
GCA_900460465.1	GCA_900460465.1_04599	yopO	type III secretion system effector protein kinase YopO/YpkA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	729	100.00	97.26	729	CFQ25321.1	type III secretion system effector protein kinase YopO/YpkA	NA	NA	UAVH01000010.1	30961	33159
GCA_900460465.1	GCA_900460465.1_04600	yopJ	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	288	288	100.00	99.65	288	AKN09807.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	NF040632.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	UAVH01000010.1	33555	34421
GCA_900460465.1	GCA_900460465.1_04602	yopH	T3SS effector protein-tyrosine-phosphatase YopH	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	468	468	100.00	98.50	468	AJJ21453.1	T3SS effector protein-tyrosine-phosphatase YopH	NA	NA	UAVH01000010.1	36053	37459
GCA_900460465.1	GCA_900460465.1_04617	virF	virulence regulon transcriptional activator VirF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	271	271	100.00	97.79	271	AAD16833.1	virulence regulon transcriptional activator VirF	NA	NA	UAVH01000010.1	47654	48469
GCA_900460465.1	GCA_900460465.1_04636	lcrV	type III secretion system needle tip protein LcrV	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	326	329	99.70	96.04	328	CNC59088.1	type III secretion system needle tip protein LcrV	NA	NA	UAVH01000010.1	61666	62646
GCA_900460465.1	GCA_900460465.1_04638	yopB	type III secretion system translocon subunit YopB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	401	401	100.00	96.26	401	AAK69211.1	type III secretion system translocon subunit YopB	NA	NA	UAVH01000010.1	63143	64348
GCA_900460465.1	GCA_900460465.1_04639	yopD	type III secretion system translocon subunit YopD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	306	100.00	97.71	306	AAK69210.1	type III secretion system translocon subunit YopD	NA	NA	UAVH01000010.1	64367	65287
GCA_019685795.1	GCA_019685795.1_00396	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	69.06	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JACEVE010000012.1	305	742
GCA_019685795.1	GCA_019685795.1_01140	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACEVE010000026.1	23146	24435
GCA_019685795.1	GCA_019685795.1_01170	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACEVE010000027.1	25365	26438
GCA_019685795.1	GCA_019685795.1_02191	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACEVE010000073.1	2557	2958
GCA_019685795.1	GCA_019685795.1_02192	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	96.74	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACEVE010000073.1	2976	4265
GCA_019685795.1	GCA_019685795.1_02193	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	93.27	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JACEVE010000073.1	4265	4579
GCA_000233225.2	GCA_000233225.2_00890	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AGQG01000004.1	17558	17986
GCA_000233225.2	GCA_000233225.2_01396	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AGQG01000003.1	233384	235174
GCA_000233225.2	GCA_000233225.2_01873	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AGQG01000001.1	155659	157122
GCA_000233225.2	GCA_000233225.2_01874	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AGQG01000001.1	157143	158360
GCA_002763745.1	GCA_002763745.1_01973	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP024724.1	156352	158277
GCA_002763745.1	GCA_002763745.1_02117	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP024724.1	307231	308196
GCA_003492745.1	GCA_003492745.1_00304	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQLP01000001.1	278336	279730
GCA_003492745.1	GCA_003492745.1_01529	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	QQLP01000007.1	229	1032
GCA_003492745.1	GCA_003492745.1_01530	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	QQLP01000007.1	1032	1868
GCA_003492745.1	GCA_003492745.1_01532	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	QQLP01000007.1	5697	6512
GCA_003492745.1	GCA_003492745.1_01533	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	QQLP01000007.1	6573	7376
GCA_003492745.1	GCA_003492745.1_01534	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	QQLP01000007.1	7376	8212
GCA_003492745.1	GCA_003492745.1_01545	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	QQLP01000007.1	15014	15874
GCA_003492745.1	GCA_003492745.1_01940	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089072.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	QQLP01000015.1	1462	2667
GCA_003492745.1	GCA_003492745.1_01951	catA2	type A-2 chloramphenicol O-acetyltransferase CatII	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	213	213	100.00	100.00	213	WP_011751353.1	type A-2 chloramphenicol O-acetyltransferase CatII	NF000491.1	type A chloramphenicol O-acetyltransferase	QQLP01000019.1	1228	1869
GCA_003492745.1	GCA_003492745.1_01961	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	QQLP01000026.1	88	903
GCA_024104995.1	GCA_024104995.1_01059	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.85	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTY010000026.1	21715	22125
GCA_947090005.1	GCA_947090005.1_01210	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	146	144	98.61	56.34	142	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CAMUMA010000067.1	796	1236
GCA_018407905.1	GCA_018407905.1_01486	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAGSWY010000002.1	290310	291383
GCA_018407905.1	GCA_018407905.1_01527	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAGSWY010000002.1	344786	345208
GCA_018407905.1	GCA_018407905.1_02158	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGSWY010000006.1	12315	13604
GCA_018407905.1	GCA_018407905.1_02273	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JAGSWY010000007.1	49585	50226
GCA_018407905.1	GCA_018407905.1_02324	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	209	281	74.38	98.56	209	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033103.1	class A beta-lactamase	JAGSWY010000009.1	126	755
GCA_018407905.1	GCA_018407905.1_02344	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.22	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAGSWY010000009.1	17420	18964
GCA_018407905.1	GCA_018407905.1_02345	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAGSWY010000009.1	19148	19708
GCA_018407905.1	GCA_018407905.1_02348	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAGSWY010000009.1	21486	21866
GCA_018407905.1	GCA_018407905.1_02349	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAGSWY010000009.1	21856	23613
GCA_009730375.1	GCA_009730375.1_01148	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	43.27	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP046316.1	1264501	1264827
GCA_016127935.1	GCA_016127935.1_01280	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	52.01	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP066062.1	1281025	1282077
GCA_016127935.1	GCA_016127935.1_01407	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	75.36	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP066062.1	1424375	1424794
GCA_016127935.1	GCA_016127935.1_02420	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	520	522	100.00	97.51	522	WP_032489639.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP066063.1	4139	5701
GCA_016127935.1	GCA_016127935.1_02456	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP066063.1	37720	38067
GCA_016127935.1	GCA_016127935.1_02460	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	95.10	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP066063.1	41753	43042
GCA_007814725.1	GCA_007814725.1_00065	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP031277.1	61200	62492
GCA_007814725.1	GCA_007814725.1_00069	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP031277.1	66175	66522
GCA_007814725.1	GCA_007814725.1_00121	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP031277.1	122470	123762
GCA_007814725.1	GCA_007814725.1_00280	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP031277.1	272917	273762
GCA_007814725.1	GCA_007814725.1_00281	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP031277.1	273869	275626
GCA_007814725.1	GCA_007814725.1_00282	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP031277.1	275616	275996
GCA_007814725.1	GCA_007814725.1_02226	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP031277.1	2185068	2186708
GCA_007814725.1	GCA_007814725.1_02261	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	474	488	97.13	99.58	474	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP031278.1	11601	13025
GCA_007814725.1	GCA_007814725.1_02266	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP031278.1	15329	15889
GCA_007814725.1	GCA_007814725.1_02267	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP031278.1	16073	17617
GCA_017792125.1	GCA_017792125.1_00333	bepE	multidrug efflux RND transporter permease subunit BepE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1049	1051	99.71	94.37	1048	AAN29241.1	multidrug efflux RND transporter permease subunit BepE	NA	NA	CP047598.1	358293	361442
GCA_017792125.1	GCA_017792125.1_00752	blaOCH	OCH family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	390	390	100.00	99.74	390	WP_063860891.1	extended-spectrum class C beta-lactamase OCH-4	NF000264.2	OCH family extended-spectrum class C beta-lactamase	CP047598.1	787343	788515
GCA_017792125.1	GCA_017792125.1_01994	cml	Cml family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	397	397	100.00	92.95	397	WP_061345584.1	Cml family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP047598.1	2020180	2021373
GCA_017792125.1	GCA_017792125.1_02010	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	266	266	100.00	72.93	266	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP047598.1	2036986	2037786
GCA_008274805.1	GCA_008274805.1_03027	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	262	97.71	61.72	256	WP_019396295.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP022579.1	3334358	3335134
GCA_015557515.1	GCA_015557515.1_00280	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	94.68	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JADNON010000013.1	40913	42832
GCA_015557515.1	GCA_015557515.1_01569	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	598	593	98.99	33.50	603	WP_012705551.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	JADNON010000003.1	156573	158369
GCA_001679155.1	GCA_001679155.1_01210	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	LZDN01000009.1	54390	55331
GCA_013276735.1	GCA_013276735.1_00679	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMLO01000027.1	579	1712
GCA_013276735.1	GCA_013276735.1_00783	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMLO01000029.1	69041	70960
GCA_013276735.1	GCA_013276735.1_00784	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	VMLO01000029.1	72067	72804
GCA_001552975.1	GCA_001552975.1_00460	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	45.90	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KQ959775.1	278089	278511
GCA_001552975.1	GCA_001552975.1_02056	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.50	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KQ959840.1	127076	128554
GCA_001552975.1	GCA_001552975.1_02693	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_003505402.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KQ959850.1	70062	71981
GCA_000258685.1	GCA_000258685.1_00094	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP003045.1	101115	102473
GCA_000258685.1	GCA_000258685.1_00288	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.67	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP003045.1	328971	330326
GCA_000258685.1	GCA_000258685.1_01482	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	279	250	100.00	96.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP003045.1	1567362	1568201
GCA_000258685.1	GCA_000258685.1_01648	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP003045.1	1758044	1759336
GCA_000258685.1	GCA_000258685.1_01695	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.63	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP003045.1	1793658	1794275
GCA_000258685.1	GCA_000258685.1_01696	erm(T)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	97.13	244	WP_002345002.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP003045.1	1795212	1795946
GCA_000258685.1	GCA_000258685.1_01835	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	97.62	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP003045.1	1908154	1908534
GCA_000258685.1	GCA_000258685.1_01836	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.57	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP003045.1	1908524	1910281
GCA_000258685.1	GCA_000258685.1_01837	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	209	281	74.38	94.74	209	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033103.1	class A beta-lactamase	CP003045.1	1910603	1911232
GCA_000258685.1	GCA_000258685.1_01862	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP003045.1	1934845	1935195
GCA_000258685.1	GCA_000258685.1_01939	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP003045.1	1990481	1990615
GCA_000258685.1	GCA_000258685.1_02106	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP003045.1	2154073	2155515
GCA_000258685.1	GCA_000258685.1_02363	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP003045.1	2393195	2394160
GCA_000258685.1	GCA_000258685.1_02364	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP003045.1	2394728	2395675
GCA_000258685.1	GCA_000258685.1_02365	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP003045.1	2395677	2396654
GCA_000258685.1	GCA_000258685.1_02580	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP003045.1	2625811	2627340
GCA_000258685.1	GCA_000258685.1_02616	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	98.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP003045.1	2674129	2675181
GCA_001053405.1	GCA_001053405.1_00073	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JVTN01000026.1	700	1515
GCA_001053405.1	GCA_001053405.1_00300	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JVTN01000035.1	375	1229
GCA_001053405.1	GCA_001053405.1_00526	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JVTN01000041.1	1643	3424
GCA_001053405.1	GCA_001053405.1_02393	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVTN01000009.1	3312	4754
GCA_001053405.1	GCA_001053405.1_02477	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JVTN01000016.1	1897	3816
GCA_009496895.1	GCA_009496895.1_01514	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJC01000005.1	109469	110668
GCA_000221165.2	GCA_000221165.2_00220	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	403	399	100.00	90.73	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AFUO01000001.1	46797	48008
GCA_900232945.1	GCA_900232945.1_01544	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	OCTU01000004.1	9997	10728
GCA_000025145.2	GCA_000025145.2_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP001844.2	40197	40601
GCA_000025145.2	GCA_000025145.2_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP001844.2	40818	41561
GCA_000025145.2	GCA_000025145.2_00040	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP001844.2	44034	46040
GCA_000025145.2	GCA_000025145.2_00041	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP001844.2	46140	47897
GCA_000025145.2	GCA_000025145.2_00042	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP001844.2	47897	48268
GCA_000025145.2	GCA_000025145.2_00051	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP001844.2	55005	55736
GCA_000025145.2	GCA_000025145.2_00052	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP001844.2	55862	56644
GCA_000025145.2	GCA_000025145.2_00135	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP001844.2	150759	152117
GCA_000025145.2	GCA_000025145.2_00332	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP001844.2	379626	380981
GCA_000025145.2	GCA_000025145.2_00369	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP001844.2	414287	414898
GCA_000025145.2	GCA_000025145.2_01664	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP001844.2	1720415	1721146
GCA_000025145.2	GCA_000025145.2_01665	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP001844.2	1721272	1722054
GCA_000025145.2	GCA_000025145.2_01783	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP001844.2	1864169	1865461
GCA_000025145.2	GCA_000025145.2_01822	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	CP001844.2	1896594	1897316
GCA_000025145.2	GCA_000025145.2_01823	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP001844.2	1897441	1898148
GCA_000025145.2	GCA_000025145.2_01828	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP001844.2	1902278	1903261
GCA_000025145.2	GCA_000025145.2_01829	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP001844.2	1903263	1904198
GCA_000025145.2	GCA_000025145.2_01837	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP001844.2	1910399	1911154
GCA_000025145.2	GCA_000025145.2_01838	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP001844.2	1911193	1911588
GCA_000025145.2	GCA_000025145.2_01840	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP001844.2	1912118	1912846
GCA_000025145.2	GCA_000025145.2_01841	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP001844.2	1912881	1913600
GCA_000025145.2	GCA_000025145.2_01842	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP001844.2	1913881	1914645
GCA_000025145.2	GCA_000025145.2_01998	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP001844.2	2039558	2039908
GCA_000025145.2	GCA_000025145.2_02003	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP001844.2	2042116	2042607
GCA_000025145.2	GCA_000025145.2_02007	sep	staphylococcal enterotoxin type P	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	260	260	100.00	100.00	260	ADC38120.1	staphylococcal enterotoxin type P	NA	NA	CP001844.2	2044410	2045192
GCA_000025145.2	GCA_000025145.2_02077	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP001844.2	2096459	2096593
GCA_000025145.2	GCA_000025145.2_02224	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP001844.2	2250774	2252216
GCA_000025145.2	GCA_000025145.2_02396	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP001844.2	2402553	2402972
GCA_000025145.2	GCA_000025145.2_02480	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP001844.2	2491351	2492316
GCA_000025145.2	GCA_000025145.2_02481	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP001844.2	2492883	2493830
GCA_000025145.2	GCA_000025145.2_02482	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP001844.2	2493832	2494809
GCA_000025145.2	GCA_000025145.2_02708	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP001844.2	2734637	2736166
GCA_000025145.2	GCA_000025145.2_02742	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP001844.2	2779496	2780548
GCA_900455515.1	GCA_900455515.1_01419	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	135	100.00	68.89	135	WP_003082280.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	UAUF01000014.1	1241230	1241637
GCA_900455515.1	GCA_900455515.1_01772	blaLUT-1	extended-spectrum class A beta-lactamase LUT-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	296	296	100.00	100.00	296	WP_010798607.1	extended-spectrum class A beta-lactamase LUT-1	NF000324.2	LUT family class A beta-lactamase	UAUF01000014.1	1603139	1604029
GCA_900455515.1	GCA_900455515.1_02260	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	410	414	95.89	71.36	398	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	UAUF01000011.1	465834	467066
GCA_900455515.1	GCA_900455515.1_03366	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	58.24	261	WP_003161096.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	UAUF01000012.1	447704	448486
GCA_900455515.1	GCA_900455515.1_05395	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	HMM	964	949	99.16	87.20	945	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	UAUF01000010.1	210598	213492
GCA_900455515.1	GCA_900455515.1_05578	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	UAUF01000010.1	363729	364163
GCA_900455515.1	GCA_900455515.1_05579	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	UAUF01000010.1	364235	364585
GCA_900455515.1	GCA_900455515.1_05580	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	UAUF01000010.1	364598	364873
GCA_900455515.1	GCA_900455515.1_05581	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.40	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UAUF01000010.1	364945	366630
GCA_900455515.1	GCA_900455515.1_05582	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	UAUF01000010.1	366648	367013
GCA_900455515.1	GCA_900455515.1_05583	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	UAUF01000010.1	367010	367246
GCA_900455515.1	GCA_900455515.1_05620	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family A	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	185	169	95.27	42.59	162	AIQ64103.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	NF040503.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	UAUF01000010.1	397168	397725
GCA_030584725.1	GCA_030584725.1_06761	blaBJP	BJP family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	295	294	99.66	85.67	293	WP_011088970.1	BJP family subclass B3 metallo-beta-lactamase	NF012140.0	BJP family subclass B3 metallo-beta-lactamase	CP126003.1	7076568	7077455
GCA_030584725.1	GCA_030584725.1_06822	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	305	97.38	52.19	297	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP126003.1	7147597	7148496
GCA_014931475.1	GCA_014931475.1_01066	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP063124.1	1062116	1062976
GCA_024105015.1	GCA_024105015.1_00366	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTZ010000019.1	1763	2173
GCA_009717325.1	GCA_009717325.1_00808	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYI01000003.1	33473	34936
GCA_009717325.1	GCA_009717325.1_00809	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYI01000003.1	35056	36273
GCA_029928965.1	GCA_029928965.1_00020	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREDD010000010.1	16576	16956
GCA_029928965.1	GCA_029928965.1_00021	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREDD010000010.1	16946	18703
GCA_029928965.1	GCA_029928965.1_00022	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREDD010000010.1	18810	19655
GCA_029928965.1	GCA_029928965.1_01584	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREDD010000002.1	574843	575916
GCA_029928965.1	GCA_029928965.1_01634	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAREDD010000002.1	635116	635538
GCA_029928965.1	GCA_029928965.1_02101	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDD010000004.1	55594	56883
GCA_029928965.1	GCA_029928965.1_02381	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREDD010000007.1	5654	6049
GCA_029928965.1	GCA_029928965.1_02382	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDD010000007.1	6066	7358
GCA_029928965.1	GCA_029928965.1_02386	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREDD010000007.1	11041	11388
GCA_003971365.1	GCA_003971365.1_01543	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	CP034666.1	1649369	1650310
GCA_000517885.1	GCA_000517885.1_00761	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	498	494	99.60	62.20	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	ASPT01000003.1	295100	296596
GCA_000517885.1	GCA_000517885.1_00939	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	92.91	48.81	252	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	ASPT01000005.1	85082	85891
GCA_000517885.1	GCA_000517885.1_01015	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	211	212	99.53	77.25	211	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	ASPT01000005.1	156571	157206
GCA_000517885.1	GCA_000517885.1_01433	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family A	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	175	169	97.63	64.24	165	AIQ64103.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	NF040503.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	ASPT01000012.1	296	823
GCA_000517885.1	GCA_000517885.1_01444	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	107	99.07	46.23	106	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	ASPT01000012.1	11038	11397
GCA_000517885.1	GCA_000517885.1_01889	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	68.06	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	ASPT01000015.1	38526	39176
GCA_000517885.1	GCA_000517885.1_02555	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	312	304	92.11	66.90	287	WP_087344360.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	ASPT01000021.1	325454	326392
GCA_000517885.1	GCA_000517885.1_03191	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	97.56	44.64	280	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	ASPT01000027.1	84328	85191
GCA_000517885.1	GCA_000517885.1_03531	taeA	ABC-F type ribosomal protection protein TaeA	core	AMR	AMR	PLEUROMUTILIN	TIAMULIN	BLASTP	651	648	100.00	91.86	651	WP_071223118.1	ABC-F type ribosomal protection protein TaeA	NA	NA	ASPT01000030.1	59079	61034
GCA_000517885.1	GCA_000517885.1_04354	aac(2)-IIb	kasugamycin N-acetyltransferase AAC(2)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	HMM	239	240	99.58	66.95	239	WP_071224044.1	kasugamycin N-acetyltransferase AAC(2)-IIb	NF033472.1	kasugamycin N-acetyltransferase AAC(2)-IIb	ASPT01000036.1	43484	44203
GCA_000517885.1	GCA_000517885.1_04693	qacH	quaternary ammonium compound efflux SMR transporter QacH	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	125	125	100.00	100.00	125	WP_000121134.1	quaternary ammonium compound efflux SMR transporter QacH	NA	NA	ASPT01000046.1	7115	7492
GCA_000517885.1	GCA_000517885.1_04779	tetB(58)	tetracycline efflux ABC transporter Tet(58) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	271	271	100.00	91.88	271	WP_071223302.1	tetracycline efflux ABC transporter Tet(58) subunit B	NA	NA	ASPT01000051.1	21432	22247
GCA_001072035.1	GCA_001072035.1_00096	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JVNJ01000001.1	94257	95474
GCA_001072035.1	GCA_001072035.1_00097	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JVNJ01000001.1	95594	97057
GCA_001558815.2	GCA_001558815.2_01765	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP014023.2	1794232	1795524
GCA_001558815.2	GCA_001558815.2_01900	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP014023.2	1949739	1950812
GCA_001558815.2	GCA_001558815.2_02457	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP014023.2	2509972	2510391
GCA_030175855.1	GCA_030175855.1_00187	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASNTX010000015.1	787	1638
GCA_030175855.1	GCA_030175855.1_00196	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNTX010000015.1	9520	10374
GCA_030175855.1	GCA_030175855.1_00202	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASNTX010000018.1	269	1444
GCA_025665415.1	GCA_025665415.1_00060	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP106834.1	68652	69941
GCA_025665415.1	GCA_025665415.1_00063	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP106834.1	72118	72465
GCA_025665415.1	GCA_025665415.1_00137	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	98.59	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP106834.1	153097	153525
GCA_025665415.1	GCA_025665415.1_02468	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP106836.1	15242	16087
GCA_025665415.1	GCA_025665415.1_02469	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP106836.1	16194	17951
GCA_025665415.1	GCA_025665415.1_02470	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP106836.1	17941	18321
GCA_025665415.1	GCA_025665415.1_02473	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP106836.1	20126	21592
GCA_000011925.1	GCA_000011925.1_00216	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP000029.1	221788	223080
GCA_000011925.1	GCA_000011925.1_01208	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP000029.1	1253251	1253982
GCA_000011925.1	GCA_000011925.1_01209	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP000029.1	1254108	1254890
GCA_000011925.1	GCA_000011925.1_01332	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP000029.1	1399689	1400420
GCA_000011925.1	GCA_000011925.1_01333	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP000029.1	1400546	1401328
GCA_000011925.1	GCA_000011925.1_01488	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP000029.1	1524695	1525075
GCA_000011925.1	GCA_000011925.1_01489	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP000029.1	1525065	1526822
GCA_000011925.1	GCA_000011925.1_01490	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP000029.1	1526929	1527774
GCA_000011925.1	GCA_000011925.1_01607	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP000029.1	1610764	1611249
GCA_000011925.1	GCA_000011925.1_01611	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP000029.1	1614064	1615503
GCA_000011925.1	GCA_000011925.1_02312	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP000029.1	2336580	2337647
GCA_000011925.1	GCA_000011925.1_02364	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP000029.1	2395235	2395663
GCA_000011925.1	GCA_000011925.1_02438	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP000029.1	2485525	2485872
GCA_000011925.1	GCA_000011925.1_02441	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	432	429	100.00	90.68	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP000029.1	2488041	2489339
GCA_000011925.1	GCA_000011925.1_02518	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP000029.1	2566052	2566834
GCA_000011925.1	GCA_000011925.1_02519	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP000029.1	2566960	2567691
GCA_000011925.1	GCA_000011925.1_02528	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP000029.1	2574428	2574799
GCA_000011925.1	GCA_000011925.1_02529	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP000029.1	2574799	2576556
GCA_000011925.1	GCA_000011925.1_02530	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP000029.1	2576656	2578662
GCA_000011925.1	GCA_000011925.1_02565	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP000028.1	1699	2544
GCA_000011925.1	GCA_000011925.1_02566	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP000028.1	2651	4408
GCA_000011925.1	GCA_000011925.1_02567	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP000028.1	4398	4778
GCA_000011925.1	GCA_000011925.1_02572	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP000028.1	7688	8482
GCA_000011925.1	GCA_000011925.1_02573	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP000028.1	8575	9117
GCA_000011925.1	GCA_000011925.1_02574	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP000028.1	9114	10022
GCA_016900855.1	GCA_016900855.1_02533	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	88.01	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAFEUH010000009.1	49644	51122
GCA_019048165.1	GCA_019048165.1_01880	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP077302.1	1931538	1932959
GCA_019048165.1	GCA_019048165.1_01891	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	148	148	100.00	96.62	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP077302.1	1938254	1938700
GCA_002359915.1	GCA_002359915.1_00621	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	123	100.00	45.53	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	DEOE01000026.1	148173	148541
GCA_007814275.1	GCA_007814275.1_00439	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP031269.1	463541	464833
GCA_007814275.1	GCA_007814275.1_02802	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP031268.1	33563	34306
GCA_007814275.1	GCA_007814275.1_02803	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP031268.1	34529	34927
GCA_007814275.1	GCA_007814275.1_02817	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP031268.1	46893	47273
GCA_007814275.1	GCA_007814275.1_02819	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	394	585	64.96	99.74	380	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	CP031268.1	47835	49019
GCA_007814275.1	GCA_007814275.1_02820	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP031268.1	49126	49971
GCA_007814275.1	GCA_007814275.1_02825	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	284	459	61.87	100.00	284	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NA	NA	CP031268.1	52725	53579
GCA_007814275.1	GCA_007814275.1_02847	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP031268.1	68945	69688
GCA_007814275.1	GCA_007814275.1_02848	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	191	134	98.51	99.24	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP031268.1	69910	70485
GCA_007814275.1	GCA_007814275.1_02889	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP031267.1	28706	29053
GCA_022346665.1	GCA_022346665.1_00346	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	105	104	100.00	98.08	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAKREN010000014.1	6995	7312
GCA_022346665.1	GCA_022346665.1_00347	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.83	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKREN010000014.1	7309	8598
GCA_022346665.1	GCA_022346665.1_00348	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKREN010000014.1	8616	9011
GCA_009379015.1	GCA_009379015.1_00102	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCZ01000001.1	111081	112022
GCA_001889125.1	GCA_001889125.1_00272	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	218	216	94.91	46.45	211	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP013290.1	265842	266498
GCA_001889125.1	GCA_001889125.1_00273	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	481	631	73.22	44.73	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP013290.1	266544	267989
GCA_022569235.1	GCA_022569235.1_00673	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKT010000002.1	140678	141970
GCA_022569235.1	GCA_022569235.1_00806	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKT010000002.1	284556	285629
GCA_022569235.1	GCA_022569235.1_01771	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKT010000006.1	98868	99287
GCA_022569235.1	GCA_022569235.1_02469	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKRKT010000015.1	87	467
GCA_022569235.1	GCA_022569235.1_02470	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKRKT010000015.1	457	2214
GCA_022569235.1	GCA_022569235.1_02471	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKRKT010000015.1	2321	3166
GCA_900129535.1	GCA_900129535.1_00727	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	FQWA01000011.1	21715	22680
GCA_900129535.1	GCA_900129535.1_01807	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	FQWA01000007.1	26775	27965
GCA_022834915.1	GCA_022834915.1_02617	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	249	93.57	46.61	236	WP_197749418.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	BQNH01000001.1	3065924	3066700
GCA_001809925.1	GCA_001809925.1_00732	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV799335.1	59649	60503
GCA_022014045.1	GCA_022014045.1_02161	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.55	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	JAENXZ010000008.1	61103	63028
GCA_001587175.1	GCA_001587175.1_00663	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	60.61	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP013651.1	631964	632392
GCA_006974125.1	GCA_006974125.1_00131	aph(6)	APH(6) family putative aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	270	270	99.63	93.31	269	WP_012480135.1	APH(6) family putative aminoglycoside O-phosphotransferase	NF012160.0	APH(6) family putative aminoglycoside O-phosphotransferase	CP037858.1	148555	149367
GCA_006974125.1	GCA_006974125.1_00324	blaL1	L1 family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	290	290	100.00	95.52	290	WP_063842688.1	L1 family subclass B3 metallo-beta-lactamase	NF033106.1	L1 family subclass B3 metallo-beta-lactamase	CP037858.1	351828	352700
GCA_006974125.1	GCA_006974125.1_01309	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	304	100.00	71.05	304	WP_063842700.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP037858.1	1429688	1430599
GCA_006974125.1	GCA_006974125.1_01639	smeF	multidrug efflux RND transporter outer membrane subunit SmeF	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	461	466	98.71	98.70	460	CAC14596.1	multidrug efflux RND transporter outer membrane subunit SmeF	NA	NA	CP037858.1	1810221	1811606
GCA_006974125.1	GCA_006974125.1_01950	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	144	150	85.33	55.47	128	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP037858.1	2140091	2140525
GCA_006974125.1	GCA_006974125.1_03243	emrC	multidrug efflux transporter outer membrane subunit EmrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	497	497	100.00	97.59	497	CAQ45062.1	multidrug efflux transporter outer membrane subunit EmrC	NA	NA	CP037858.1	3549154	3550647
GCA_006974125.1	GCA_006974125.1_03244	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	392	393	100.00	99.24	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	CP037858.1	3550659	3551837
GCA_006974125.1	GCA_006974125.1_03245	emrB	multidrug efflux MFS transporter permease subunit EmrB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	528	528	100.00	99.05	528	CAQ45064.1	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	CP037858.1	3551845	3553431
GCA_006974125.1	GCA_006974125.1_03704	aph(3)-IIc	aminoglycoside O-phosphotransferase APH(3)-IIc	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	267	267	100.00	96.25	267	WP_012479999.1	aminoglycoside O-phosphotransferase APH(3)-IIc	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP037858.1	4012326	4013129
GCA_013277095.1	GCA_013277095.1_00074	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	VMMG01000010.1	51816	53033
GCA_013277095.1	GCA_013277095.1_00075	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	VMMG01000010.1	53054	54517
GCA_013277095.1	GCA_013277095.1_00496	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.49	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMMG01000023.1	13228	14649
GCA_002797135.1	GCA_002797135.1_01916	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	PENE01000002.1	129522	131447
GCA_002797135.1	GCA_002797135.1_02635	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	95.94	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	PENE01000002.1	893398	895323
GCA_002797135.1	GCA_002797135.1_02640	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	PENE01000002.1	899469	900434
GCA_002797135.1	GCA_002797135.1_02693	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	PENE01000002.1	943842	944642
GCA_959023985.1	GCA_959023985.1_00226	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.99	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CAUFDW010000004.1	26543	28267
GCA_959023985.1	GCA_959023985.1_00227	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.80	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CAUFDW010000004.1	28269	30005
GCA_959023985.1	GCA_959023985.1_00827	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAUFDW010000023.1	15337	16554
GCA_959023985.1	GCA_959023985.1_00828	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAUFDW010000023.1	16674	18137
GCA_002884615.1	GCA_002884615.1_01686	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	51.72	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	PNGG01000003.1	278993	280045
GCA_002884615.1	GCA_002884615.1_02144	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PNGG01000005.1	138388	139677
GCA_002884615.1	GCA_002884615.1_02148	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	PNGG01000005.1	143363	143710
GCA_002884615.1	GCA_002884615.1_02292	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	75.36	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	PNGG01000007.1	17217	17636
GCA_007097425.1	GCA_007097425.1_00590	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VKDK01000019.1	1658	2833
GCA_007097425.1	GCA_007097425.1_01788	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.61	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	VKDK01000038.1	8312	9853
GCA_007097425.1	GCA_007097425.1_01789	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VKDK01000038.1	10060	10914
GCA_007097425.1	GCA_007097425.1_01839	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VKDK01000003.1	33459	34901
GCA_007097425.1	GCA_007097425.1_02026	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	327	212	87.26	44.62	186	CAC86907.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	VKDK01000040.1	8201	9184
GCA_000286495.1	GCA_000286495.1_00848	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	ALKI01000012.1	14979	16898
GCA_003985315.1	GCA_003985315.1_00131	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RYES01000001.1	124351	125292
GCA_003942565.1	GCA_003942565.1_00302	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJNI01000001.1	306737	307165
GCA_900693025.1	GCA_900693025.1_00979	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	LR216060.1	920162	921361
GCA_900693025.1	GCA_900693025.1_01412	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LR216060.1	1310892	1312811
GCA_900693025.1	GCA_900693025.1_01423	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	LR216060.1	1322726	1323463
GCA_000738385.1	GCA_000738385.1_00694	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JFCO01000023.1	1884	3803
GCA_000738385.1	GCA_000738385.1_00835	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JFCO01000032.1	1568	3349
GCA_000738385.1	GCA_000738385.1_01040	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCO01000035.1	180002	180856
GCA_000738385.1	GCA_000738385.1_01045	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JFCO01000035.1	185316	186737
GCA_000738385.1	GCA_000738385.1_01379	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JFCO01000052.1	12173	14092
GCA_000738385.1	GCA_000738385.1_01649	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JFCO01000057.1	1592	2011
GCA_000738385.1	GCA_000738385.1_01650	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JFCO01000057.1	2011	2847
GCA_000738385.1	GCA_000738385.1_01652	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JFCO01000057.1	3051	4226
GCA_000738385.1	GCA_000738385.1_01674	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	271	271	100.00	99.63	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JFCO01000058.1	908	1723
GCA_000738385.1	GCA_000738385.1_01935	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JFCO01000067.1	501	2420
GCA_030228865.1	GCA_030228865.1_01696	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPIS010000004.1	41193	42047
GCA_000378745.1	GCA_000378745.1_00491	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	397	321	91.28	98.63	293	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	KB905269.1	4731	5924
GCA_000378745.1	GCA_000378745.1_01156	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	KB905277.1	36498	38423
GCA_003263965.1	GCA_003263965.1_00253	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NAQP01000012.1	78152	78526
GCA_003459805.1	GCA_003459805.1_00372	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	QRWX01000001.1	368100	368837
GCA_005890435.1	GCA_005890435.1_01318	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	SOQT01000070.1	29681	31600
GCA_005890435.1	GCA_005890435.1_01319	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	SOQT01000070.1	32707	33444
GCA_005890435.1	GCA_005890435.1_01934	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.49	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQT01000008.1	28844	30265
GCA_003691465.1	GCA_003691465.1_00126	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	135	98.52	68.42	133	WP_003082280.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP033105.1	134816	135223
GCA_003691465.1	GCA_003691465.1_01780	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	58.24	261	WP_003161096.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP033105.1	1877340	1878122
GCA_003691465.1	GCA_003691465.1_02355	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	410	414	95.89	71.61	398	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP033105.1	2432644	2433876
GCA_003691465.1	GCA_003691465.1_04548	blaLUT	LUT family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	296	296	100.00	97.97	296	WP_063860831.1	class A beta-lactamase LUT-5	NF000324.2	LUT family class A beta-lactamase	CP033105.1	4786970	4787860
GCA_003691465.1	GCA_003691465.1_05026	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family B	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	184	186	92.47	63.95	172	AAN67541.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	NF040504.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	CP033105.1	5297060	5297614
GCA_002096755.1	GCA_002096755.1_01323	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	NCVF01000024.1	9293	10492
GCA_002096755.1	GCA_002096755.1_01465	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	NCVF01000024.1	161109	162572
GCA_002096755.1	GCA_002096755.1_01466	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	NCVF01000024.1	162593	163810
GCA_020682835.1	GCA_020682835.1_01086	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHMMT010000012.1	22228	22608
GCA_020682835.1	GCA_020682835.1_01087	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHMMT010000012.1	22598	24355
GCA_020682835.1	GCA_020682835.1_01088	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHMMT010000012.1	24462	25307
GCA_020682835.1	GCA_020682835.1_01131	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JAHMMT010000016.1	1314	2048
GCA_020682835.1	GCA_020682835.1_01133	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAHMMT010000017.1	546	1985
GCA_020682835.1	GCA_020682835.1_01699	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHMMT010000003.1	8459	10465
GCA_020682835.1	GCA_020682835.1_01974	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHMMT010000004.1	126546	127619
GCA_020682835.1	GCA_020682835.1_02144	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHMMT010000006.1	55622	56911
GCA_027689675.1	GCA_027689675.1_00733	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAQFEY010000002.1	32803	33648
GCA_027689675.1	GCA_027689675.1_00734	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAQFEY010000002.1	33755	35512
GCA_027689675.1	GCA_027689675.1_00735	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAQFEY010000002.1	35502	35882
GCA_027689675.1	GCA_027689675.1_01559	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAQFEY010000005.1	69928	71472
GCA_027689675.1	GCA_027689675.1_01560	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAQFEY010000005.1	71650	72216
GCA_027689675.1	GCA_027689675.1_01656	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQFEY010000005.1	173822	174169
GCA_027689675.1	GCA_027689675.1_01660	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAQFEY010000005.1	177852	179144
GCA_000173995.1	GCA_000173995.1_00414	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.85	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	ACEQ02000032.1	21792	23318
GCA_000173995.1	GCA_000173995.1_01055	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	ACEQ02000015.1	18432	19337
GCA_000173995.1	GCA_000173995.1_02132	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	418	412	100.00	94.50	418	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	ACEQ02000001.1	79337	80593
GCA_000173995.1	GCA_000173995.1_02133	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.14	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	ACEQ02000001.1	80610	81473
GCA_009035845.1	GCA_009035845.1_00106	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP045110.1	101401	102216
GCA_009035845.1	GCA_009035845.1_00221	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001112624.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	CP045110.1	225025	225813
GCA_009035845.1	GCA_009035845.1_00656	nreB	nickel resistance MFS transporter NreB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	416	416	100.00	98.08	416	ADY84088.1	nickel resistance MFS transporter NreB	NA	NA	CP045110.1	679558	680808
GCA_009035845.1	GCA_009035845.1_01213	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	91.67	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP045110.1	1239715	1240149
GCA_009035845.1	GCA_009035845.1_01214	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP045110.1	1240888	1241313
GCA_009035845.1	GCA_009035845.1_01215	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	96.26	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP045110.1	1241352	1243037
GCA_009035845.1	GCA_009035845.1_01595	abaF	fosfomycin efflux MFS transporter AbaF	plus	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	429	429	100.00	100.00	429	ABO11759.2	fosfomycin efflux MFS transporter AbaF	NA	NA	CP045110.1	1626239	1627528
GCA_009035845.1	GCA_009035845.1_01843	blaOXA-98	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_001021777.1	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	NF000268.2	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase	CP045110.1	1887843	1888667
GCA_009035845.1	GCA_009035845.1_02399	amvA	multidrug efflux MFS transporter AmvA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	492	492	100.00	98.98	492	ACQ82816.1	multidrug efflux MFS transporter AmvA	NA	NA	CP045110.1	2473727	2475205
GCA_009035845.1	GCA_009035845.1_02813	blaADC-158	extended-spectrum class C beta-lactamase ADC-158	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	383	383	100.00	100.00	383	WP_001211227.1	extended-spectrum class C beta-lactamase ADC-158	NF000425.2	ADC family extended-spectrum class C beta-lactamase	CP045110.1	2872625	2873776
GCA_009035845.1	GCA_009035845.1_03000	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	397	397	100.00	100.00	397	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP045110.1	3082235	3083428
GCA_001458475.1	GCA_001458475.1_00945	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	LN869922.1	870235	871071
GCA_001458475.1	GCA_001458475.1_00946	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	LN869922.1	871071	871874
GCA_001458475.1	GCA_001458475.1_00947	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	LN869922.1	871935	872750
GCA_001458475.1	GCA_001458475.1_00949	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	LN869922.1	873985	874845
GCA_001458475.1	GCA_001458475.1_00957	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	LN869922.1	880654	881490
GCA_001458475.1	GCA_001458475.1_00958	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	294	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	LN869922.1	881490	882374
GCA_001458475.1	GCA_001458475.1_00963	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089072.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	LN869922.1	884875	886080
GCA_000982825.1	GCA_000982825.1_00453	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	141	141	100.00	86.52	141	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP011047.1	447998	448423
GCA_000982825.1	GCA_000982825.1_01119	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	86.62	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP011047.1	1119531	1120433
GCA_000982825.1	GCA_000982825.1_03097	fos	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	87.41	135	WP_015741374.1	FosA family fosfomycin resistance glutathione transferase	NF000339.2	FosA family fosfomycin resistance glutathione transferase	CP011047.1	3070010	3070420
GCA_000982825.1	GCA_000982825.1_03293	blaCSA-1	class C beta-lactamase CSA-1	core	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	ALLELEP	375	375	100.00	100.00	375	WP_007888761.1	class C beta-lactamase CSA-1	NF033698.1	CSA family class C beta-lactamase	CP011047.1	3252547	3253674
GCA_000982825.1	GCA_000982825.1_04462	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	98.94	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	CP011047.1	4460642	4461211
GCA_000982825.1	GCA_000982825.1_04463	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	98.95	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP011047.1	4461317	4464166
GCA_000982825.1	GCA_000982825.1_04467	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	96.71	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	CP011047.1	4465336	4465794
GCA_000982825.1	GCA_000982825.1_04468	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.01	304	APX31172.1	heat resistance protein YfdX1	NA	NA	CP011047.1	4465817	4466731
GCA_000982825.1	GCA_000982825.1_04469	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	98.64	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP011047.1	4466834	4467721
GCA_000982825.1	GCA_000982825.1_04470	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	98.03	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CP011047.1	4467811	4468422
GCA_000982825.1	GCA_000982825.1_04472	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	98.63	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	CP011047.1	4469637	4470077
GCA_000982825.1	GCA_000982825.1_04473	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	569	571	99.65	98.59	569	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	CP011047.1	4470081	4471790
GCA_000982825.1	GCA_000982825.1_04474	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	97.58	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	CP011047.1	4471793	4472290
GCA_000982825.1	GCA_000982825.1_04629	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	491	491	99.80	98.98	490	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP011050.1	23057	24532
GCA_000982825.1	GCA_000982825.1_04630	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP011050.1	24525	25205
GCA_000982825.1	GCA_000982825.1_04631	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.26	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP011050.1	25395	26780
GCA_000982825.1	GCA_000982825.1_04632	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP011050.1	26809	27162
GCA_000982825.1	GCA_000982825.1_04633	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	98.37	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP011050.1	27276	28568
GCA_000982825.1	GCA_000982825.1_04634	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	99.43	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP011050.1	28579	31725
GCA_000982825.1	GCA_000982825.1_04636	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	813	824	98.79	98.28	814	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP011050.1	32380	34821
GCA_000982825.1	GCA_000982825.1_04640	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	EXACTP	605	605	100.00	100.00	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP011050.1	36132	37949
GCA_000982825.1	GCA_000982825.1_04641	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP011050.1	37949	38845
GCA_000982825.1	GCA_000982825.1_04642	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP011050.1	38885	39265
GCA_000982825.1	GCA_000982825.1_04643	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP011050.1	39270	40199
GCA_000982825.1	GCA_000982825.1_04644	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP011050.1	40254	40934
GCA_000982825.1	GCA_000982825.1_04645	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.36	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP011050.1	40931	42331
GCA_000982825.1	GCA_000982825.1_04646	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	94.44	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	CP011050.1	42547	42981
GCA_000982825.1	GCA_000982825.1_04650	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	99.29	141	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP011050.1	45528	45953
GCA_000982825.1	GCA_000982825.1_04651	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.07	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP011050.1	45966	47255
GCA_000982825.1	GCA_000982825.1_04652	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	98.46	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP011050.1	47303	49054
GCA_000982825.1	GCA_000982825.1_04653	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	90.83	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP011050.1	49072	49434
GCA_000982825.1	GCA_000982825.1_04654	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	116	116	100.00	98.28	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP011050.1	49486	49836
GCA_003428395.1	GCA_003428395.1_01374	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP031701.1	1299209	1301128
GCA_003435685.1	GCA_003435685.1_01148	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	255	300	83.67	54.18	251	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	QTUN01000002.1	82	849
GCA_003435685.1	GCA_003435685.1_01583	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	314	321	98.44	71.20	316	WP_004348227.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	QTUN01000023.1	67	1011
GCA_003435685.1	GCA_003435685.1_02222	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	QTUN01000034.1	18274	20199
GCA_003435685.1	GCA_003435685.1_02899	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	PARTIALP	168	266	57.89	92.86	154	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NA	NA	QTUN01000060.1	11	517
GCA_000413055.1	GCA_000413055.1_00354	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	92.31	66.67	204	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	KE332518.1	383788	384435
GCA_021378625.1	GCA_021378625.1_00262	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_050824634.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP089336.1	331427	333346
GCA_021378625.1	GCA_021378625.1_02435	aad9	ANT(9) family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	258	258	100.00	100.00	258	WP_002578722.1	ANT(9) family aminoglycoside nucleotidyltransferase	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP089336.1	2817291	2818067
GCA_019703365.1	GCA_019703365.1_01799	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018764.1	1737656	1739050
GCA_003494635.1	GCA_003494635.1_00426	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQHN01000001.1	408890	410284
GCA_028326625.1	GCA_028326625.1_01772	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMND010000007.1	70517	71248
GCA_028326625.1	GCA_028326625.1_01888	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMND010000009.1	49644	51563
GCA_037897925.1	GCA_037897925.1_01500	blaOXA-85	oxacillin-hydrolyzing class D beta-lactamase OXA-85	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	261	261	100.00	100.00	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	CP077112.1	1475381	1476166
GCA_021496075.1	GCA_021496075.1_00070	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP090922.1	78656	79945
GCA_021496075.1	GCA_021496075.1_00073	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP090922.1	82123	82470
GCA_021496075.1	GCA_021496075.1_00149	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	98.59	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP090922.1	165899	166327
GCA_021496075.1	GCA_021496075.1_00841	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP090922.1	883647	884492
GCA_021496075.1	GCA_021496075.1_00842	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.06	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP090922.1	884599	886356
GCA_021496075.1	GCA_021496075.1_00843	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP090922.1	886346	886726
GCA_017893985.1	GCA_017893985.1_01117	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	96.83	64.95	214	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP058315.1	1243606	1244253
GCA_001812895.1	GCA_001812895.1_00204	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	640	92.97	100.00	595	WP_063856422.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV810714.1	19816	21603
GCA_001812895.1	GCA_001812895.1_01398	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV810755.1	4238	5896
GCA_019048525.1	GCA_019048525.1_00787	blaOXA	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	153	276	55.43	96.73	153	WP_063862733.1	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-363	NA	NA	CP077369.1	830864	831325
GCA_019048525.1	GCA_019048525.1_02968	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	97.23	76.68	386	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP077369.1	3063617	3064837
GCA_947495435.1	GCA_947495435.1_00208	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CANLYX010000001.1	202062	202559
GCA_947495435.1	GCA_947495435.1_01675	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CANLYX010000005.1	23252	23599
GCA_947495435.1	GCA_947495435.1_01678	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CANLYX010000005.1	25767	27056
GCA_947495435.1	GCA_947495435.1_02217	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CANLYX010000013.1	15732	16577
GCA_947495435.1	GCA_947495435.1_02218	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CANLYX010000013.1	16684	18441
GCA_947495435.1	GCA_947495435.1_02219	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CANLYX010000013.1	18431	18811
GCA_947495435.1	GCA_947495435.1_02222	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CANLYX010000013.1	20616	22082
GCA_947495435.1	GCA_947495435.1_02246	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CANLYX010000016.1	1958	2443
GCA_002951575.1	GCA_002951575.1_00283	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.23	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP018907.1	284020	285546
GCA_002951575.1	GCA_002951575.1_00485	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP018907.1	498758	500326
GCA_002951575.1	GCA_002951575.1_00487	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP018907.1	501151	501783
GCA_002951575.1	GCA_002951575.1_00488	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.06	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP018907.1	502187	503425
GCA_002951575.1	GCA_002951575.1_00615	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP018907.1	639750	640655
GCA_002951575.1	GCA_002951575.1_01362	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP018907.1	1408790	1410169
GCA_900461185.1	GCA_900461185.1_00172	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	UFXO01000002.1	191307	192482
GCA_900461185.1	GCA_900461185.1_00459	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UFXO01000002.1	486406	487827
GCA_900461185.1	GCA_900461185.1_00464	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.13	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	UFXO01000002.1	492287	493141
GCA_900461185.1	GCA_900461185.1_00496	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	UFXO01000002.1	520886	522061
GCA_900461185.1	GCA_900461185.1_01359	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	483	513	94.15	96.69	483	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	UFXO01000002.1	1481310	1482761
GCA_900461185.1	GCA_900461185.1_01576	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	UFXO01000002.1	1722545	1724326
GCA_900461185.1	GCA_900461185.1_01580	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	UFXO01000002.1	1727839	1729620
GCA_013267735.1	GCA_013267735.1_00138	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP054018.1	169225	170865
GCA_002753935.1	GCA_002753935.1_02053	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP024596.1	2349669	2350469
GCA_000499705.1	GCA_000499705.1_00174	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	HG737333.1	167580	169586
GCA_000499705.1	GCA_000499705.1_00221	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	HG737333.1	210126	210527
GCA_000499705.1	GCA_000499705.1_00222	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	HG737333.1	210545	211834
GCA_000499705.1	GCA_000499705.1_00334	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	HG737333.1	353831	354904
GCA_000499705.1	GCA_000499705.1_01059	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	HG737333.1	1076789	1078078
GCA_000499705.1	GCA_000499705.1_02479	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	HG737334.1	13690	14070
GCA_000499705.1	GCA_000499705.1_02480	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	HG737334.1	14060	15817
GCA_000499705.1	GCA_000499705.1_02481	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	HG737334.1	15924	16769
GCA_000499705.1	GCA_000499705.1_02497	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	HG737338.1	401	1840
GCA_003493465.1	GCA_003493465.1_00196	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.12	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQKH01000001.1	221475	222869
GCA_009738205.1	GCA_009738205.1_01271	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP018186.1	1394906	1395643
GCA_014266465.1	GCA_014266465.1_00056	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JACMVI010000002.1	13446	13868
GCA_014266465.1	GCA_014266465.1_00098	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACMVI010000002.1	67272	68345
GCA_014266465.1	GCA_014266465.1_00837	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	86.01	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVI010000003.1	174570	175859
GCA_014266465.1	GCA_014266465.1_00901	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVI010000004.1	55249	56538
GCA_001838635.1	GCA_001838635.1_00169	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV838023.1	34525	36165
GCA_008330785.1	GCA_008330785.1_00457	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP021519.1	457116	458495
GCA_008330785.1	GCA_008330785.1_01170	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP021519.1	1205210	1206115
GCA_008330785.1	GCA_008330785.1_01289	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.57	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP021519.1	1337817	1339055
GCA_008330785.1	GCA_008330785.1_01290	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	207	210	100.00	96.67	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP021519.1	1339459	1340082
GCA_008330785.1	GCA_008330785.1_01292	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP021519.1	1340907	1342475
GCA_008330785.1	GCA_008330785.1_01478	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP021519.1	1545375	1546901
GCA_006094375.1	GCA_006094375.1_00103	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	CP035288.1	109620	109955
GCA_006094375.1	GCA_006094375.1_00104	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	547	547	100.00	99.82	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP035288.1	110013	111656
GCA_006094375.1	GCA_006094375.1_00105	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP035288.1	111738	112388
GCA_006094375.1	GCA_006094375.1_00141	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP035288.1	145885	147174
GCA_006094375.1	GCA_006094375.1_00144	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP035288.1	149352	149699
GCA_006094375.1	GCA_006094375.1_00221	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP035288.1	234663	235091
GCA_006094375.1	GCA_006094375.1_00923	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP035288.1	955026	955871
GCA_006094375.1	GCA_006094375.1_00924	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP035288.1	955978	957735
GCA_006094375.1	GCA_006094375.1_00925	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP035288.1	957725	958105
GCA_006094375.1	GCA_006094375.1_02423	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	335	459	72.98	100.00	335	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NA	NA	CP035290.1	3417	4424
GCA_024295705.1	GCA_024295705.1_00224	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOV010000001.1	225363	226826
GCA_024295705.1	GCA_024295705.1_00225	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOV010000001.1	226946	228163
GCA_002863285.1	GCA_002863285.1_00055	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	PKJO01000001.1	52396	53775
GCA_030231045.1	GCA_030231045.1_00688	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011152925.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPKC010000018.1	62281	63135
GCA_030231045.1	GCA_030231045.1_01603	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASPKC010000034.1	4474	6255
GCA_030231045.1	GCA_030231045.1_01608	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASPKC010000034.1	10332	12251
GCA_030231045.1	GCA_030231045.1_01612	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JASPKC010000035.1	171	986
GCA_030231045.1	GCA_030231045.1_01635	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JASPKC010000036.1	10590	12131
GCA_030231045.1	GCA_030231045.1_01901	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JASPKC010000045.1	171	617
GCA_030231045.1	GCA_030231045.1_02095	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPKC010000050.1	985	2160
GCA_030231045.1	GCA_030231045.1_02097	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JASPKC010000050.1	2364	3200
GCA_030231045.1	GCA_030231045.1_02098	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JASPKC010000050.1	3200	3619
GCA_001809565.1	GCA_001809565.1_00440	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	640	92.97	100.00	595	WP_063856422.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV797967.1	16618	18405
GCA_937906745.1	GCA_937906745.1_01705	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	94.72	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CALCXX010000183.1	121	1599
GCA_001697605.1	GCA_001697605.1_00553	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016659.1	565339	566718
GCA_001697605.1	GCA_001697605.1_01265	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016659.1	1309074	1309979
GCA_001697605.1	GCA_001697605.1_01392	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016659.1	1444342	1445580
GCA_001697605.1	GCA_001697605.1_01393	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.14	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016659.1	1445988	1446620
GCA_001697605.1	GCA_001697605.1_01395	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016659.1	1447445	1449013
GCA_001697605.1	GCA_001697605.1_01596	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016659.1	1658770	1660296
GCA_000970665.2	GCA_000970665.2_01307	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP017295.1	1329724	1330941
GCA_000970665.2	GCA_000970665.2_01308	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP017295.1	1331061	1332524
GCA_000257785.1	GCA_000257785.1_00395	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AICQ01000008.1	13244	15163
GCA_007667125.1	GCA_007667125.1_01908	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	VDQM01000006.1	61418	62797
GCA_023277625.1	GCA_023277625.1_00073	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP083172.1	84198	85676
GCA_023277625.1	GCA_023277625.1_01152	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_063856112.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP083172.1	1435887	1437806
GCA_023277625.1	GCA_023277625.1_01153	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	457	458	98.47	98.67	451	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP083172.1	1438264	1439637
GCA_000211095.1	GCA_000211095.1_02259	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	FQ312042.1	2086693	2087892
GCA_003943735.1	GCA_003943735.1_02403	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJMV01000019.1	5618	7081
GCA_003943735.1	GCA_003943735.1_02404	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJMV01000019.1	7201	8418
GCA_019329505.1	GCA_019329505.1_00828	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073836.1	806504	806989
GCA_019329505.1	GCA_019329505.1_00831	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073836.1	808745	810184
GCA_019329505.1	GCA_019329505.1_00952	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073836.1	885812	886453
GCA_019329505.1	GCA_019329505.1_00973	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073836.1	905273	906118
GCA_019329505.1	GCA_019329505.1_00974	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073836.1	906225	907982
GCA_019329505.1	GCA_019329505.1_00975	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073836.1	907972	908352
GCA_019329505.1	GCA_019329505.1_02463	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073836.1	2423431	2424498
GCA_019329505.1	GCA_019329505.1_02514	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073836.1	2482296	2482532
GCA_019329505.1	GCA_019329505.1_02591	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073836.1	2565170	2565517
GCA_019329505.1	GCA_019329505.1_02594	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073836.1	2567686	2568984
GCA_019329505.1	GCA_019329505.1_02604	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073836.1	2577770	2578420
GCA_019329505.1	GCA_019329505.1_02605	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073836.1	2578502	2580145
GCA_019329505.1	GCA_019329505.1_02606	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073836.1	2580203	2580541
GCA_019329505.1	GCA_019329505.1_02652	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073836.1	2619507	2619878
GCA_019329505.1	GCA_019329505.1_02653	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073836.1	2619878	2621635
GCA_019329505.1	GCA_019329505.1_02654	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073836.1	2621735	2623741
GCA_019329505.1	GCA_019329505.1_02752	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073837.1	7547	8107
GCA_019329505.1	GCA_019329505.1_02753	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073837.1	8292	9836
GCA_902494015.1	GCA_902494015.1_00385	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CABURS010000006.1	17408	17836
GCA_902494015.1	GCA_902494015.1_01432	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	579	579	100.00	100.00	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	CABURS010000041.1	7025	8764
GCA_902494015.1	GCA_902494015.1_01433	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	93.26	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	CABURS010000041.1	8761	10500
GCA_002742685.1	GCA_002742685.1_02891	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	538	631	87.48	69.38	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PEDM01000009.1	39982	41598
GCA_000189455.3	GCA_000189455.3_00093	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP025395.1	114738	116096
GCA_000189455.3	GCA_000189455.3_00354	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.45	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP025395.1	386463	387818
GCA_000189455.3	GCA_000189455.3_00413	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	95.57	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP025395.1	437317	437928
GCA_000189455.3	GCA_000189455.3_01764	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.59	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP025395.1	1841414	1842706
GCA_000189455.3	GCA_000189455.3_01806	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	95.42	240	ABD31003.1	serine protease SplB	NA	NA	CP025395.1	1880739	1881461
GCA_000189455.3	GCA_000189455.3_01807	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	96.17	235	ABD31004.1	serine protease SplA	NA	NA	CP025395.1	1881586	1882293
GCA_000189455.3	GCA_000189455.3_01812	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	98.07	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP025395.1	1887455	1888390
GCA_000189455.3	GCA_000189455.3_02043	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP025395.1	2074681	2074815
GCA_000189455.3	GCA_000189455.3_02190	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP025395.1	2228251	2229693
GCA_000189455.3	GCA_000189455.3_02231	ednB	epidermal cell differentiation inhibitor EdnB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	247	251	98.41	95.55	247	AXN77488.1	epidermal cell differentiation inhibitor EdnB	NA	NA	CP025395.1	2271735	2272478
GCA_000189455.3	GCA_000189455.3_02447	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP025395.1	2470191	2471156
GCA_000189455.3	GCA_000189455.3_02448	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP025395.1	2471724	2472671
GCA_000189455.3	GCA_000189455.3_02450	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	248	325	76.31	97.18	248	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP025395.1	2472903	2473649
GCA_000189455.3	GCA_000189455.3_02666	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP025395.1	2703976	2705505
GCA_000189455.3	GCA_000189455.3_02700	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.43	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP025395.1	2749280	2750332
GCA_945917645.1	GCA_945917645.1_01961	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	CAMEHQ010000021.1	13028	13540
GCA_945917645.1	GCA_945917645.1_01962	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	CAMEHQ010000021.1	13565	14770
GCA_029023765.1	GCA_029023765.1_00100	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	HMM	73	81	79.01	59.38	64	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	CP118949.1	87347	87568
GCA_029023765.1	GCA_029023765.1_00102	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	75.72	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP118949.1	88231	89871
GCA_029023765.1	GCA_029023765.1_00401	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP118949.1	395798	397912
GCA_022690375.1	GCA_022690375.1_01205	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCVN010000002.1	44824	45669
GCA_022690375.1	GCA_022690375.1_01206	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCVN010000002.1	45776	47533
GCA_022690375.1	GCA_022690375.1_01207	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCVN010000002.1	47523	47903
GCA_022690375.1	GCA_022690375.1_01581	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.62	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVN010000003.1	101610	102899
GCA_022690375.1	GCA_022690375.1_01584	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVN010000003.1	105067	105414
GCA_022690375.1	GCA_022690375.1_01698	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	97.54	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	JALCVN010000003.1	218172	218540
GCA_003202245.1	GCA_003202245.1_00565	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.42	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	NRIL01000017.1	139	1680
GCA_003202245.1	GCA_003202245.1_00812	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	NRIL01000023.1	3153	4007
GCA_003202245.1	GCA_003202245.1_00819	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	276	279	98.92	99.28	276	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	NRIL01000023.1	9627	10457
GCA_003202245.1	GCA_003202245.1_01055	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NRIL01000010.1	293	1108
GCA_003202245.1	GCA_003202245.1_01471	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	NRIL01000026.1	146920	148095
GCA_003202245.1	GCA_003202245.1_01473	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	NRIL01000026.1	148299	149135
GCA_003202245.1	GCA_003202245.1_01474	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	NRIL01000026.1	149135	149554
GCA_003202245.1	GCA_003202245.1_01714	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NRIL01000028.1	200341	201783
GCA_003202245.1	GCA_003202245.1_02718	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	NRIL01000022.1	26285	28066
GCA_900453805.1	GCA_900453805.1_01888	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	UGQV01000004.1	1866505	1868073
GCA_001680775.1	GCA_001680775.1_01542	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	MAQD01000007.1	247271	248911
GCA_006716905.1	GCA_006716905.1_00273	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	94	91	97.80	68.54	89	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	VFPV01000001.1	286072	286356
GCA_006716905.1	GCA_006716905.1_03155	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	302	97.68	72.48	298	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	VFPV01000003.1	193017	193934
GCA_006716905.1	GCA_006716905.1_03285	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.57	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	VFPV01000003.1	342505	345354
GCA_006716905.1	GCA_006716905.1_03288	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	96.71	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	VFPV01000003.1	348735	349193
GCA_006716905.1	GCA_006716905.1_03289	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	97.04	304	APX31172.1	heat resistance protein YfdX1	NA	NA	VFPV01000003.1	349216	350130
GCA_006716905.1	GCA_006716905.1_03290	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	94.24	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	VFPV01000003.1	350233	351120
GCA_006716905.1	GCA_006716905.1_03291	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	94.58	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	VFPV01000003.1	351210	351821
GCA_006716905.1	GCA_006716905.1_03293	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	90.41	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	VFPV01000003.1	353036	353476
GCA_006716905.1	GCA_006716905.1_03295	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	PARTIALP	439	571	76.88	93.39	439	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	VFPV01000003.1	353877	355196
GCA_006716905.1	GCA_006716905.1_03296	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	92.12	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	VFPV01000003.1	355193	355690
GCA_006716905.1	GCA_006716905.1_04323	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	100.00	89.74	78	AAA88371.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	VFPV01000005.1	147773	148009
GCA_006716905.1	GCA_006716905.1_04324	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	99.17	95.83	120	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	VFPV01000005.1	148006	148371
GCA_006716905.1	GCA_006716905.1_04325	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	561	561	100.00	86.10	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VFPV01000005.1	148389	150074
GCA_006716905.1	GCA_006716905.1_04326	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	140	140	99.29	84.17	139	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	VFPV01000005.1	150114	150536
GCA_006716905.1	GCA_006716905.1_04327	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	95.60	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	VFPV01000005.1	150564	150839
GCA_006716905.1	GCA_006716905.1_04328	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	95.69	116	AAA98222.1	mercuric transport protein MerT	NA	NA	VFPV01000005.1	150852	151202
GCA_006716905.1	GCA_006716905.1_04329	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	BAA36431.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	VFPV01000005.1	151274	151708
GCA_018588785.1	GCA_018588785.1_01953	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	BLASTP	264	264	100.00	99.62	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAFEVW010000007.1	77457	78251
GCA_937997015.1	GCA_937997015.1_00150	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	140	137	88.32	49.60	125	WP_012695486.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CALKUD010000002.1	35580	36002
GCA_000187855.1	GCA_000187855.1_00330	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_063856112.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	GL732518.1	335586	337505
GCA_002080125.1	GCA_002080125.1_00064	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	CP018059.1	70432	71373
GCA_017426725.1	GCA_017426725.1_01408	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAERMS010000037.1	15607	16572
GCA_017426725.1	GCA_017426725.1_01569	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAERMS010000003.1	111671	112471
GCA_017426725.1	GCA_017426725.1_01572	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAERMS010000003.1	117049	118974
GCA_000269665.1	GCA_000269665.1_01819	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AKBW01000001.1	1727545	1728744
GCA_026222695.1	GCA_026222695.1_00281	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	305	97.38	54.13	303	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP034902.1	319671	320591
GCA_022693345.1	GCA_022693345.1_00033	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP093539.1	34066	36072
GCA_022693345.1	GCA_022693345.1_00034	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP093539.1	36172	37158
GCA_022693345.1	GCA_022693345.1_00062	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.62	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP093539.1	58889	60178
GCA_022693345.1	GCA_022693345.1_00066	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP093539.1	62346	62693
GCA_022693345.1	GCA_022693345.1_00164	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093539.1	161455	162300
GCA_022693345.1	GCA_022693345.1_00165	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093539.1	162407	164164
GCA_022693345.1	GCA_022693345.1_00166	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093539.1	164154	164534
GCA_022693345.1	GCA_022693345.1_02469	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP093540.1	14855	15754
GCA_022693345.1	GCA_022693345.1_02470	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP093540.1	15853	17319
GCA_022693345.1	GCA_022693345.1_02484	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP093540.1	28489	29049
GCA_022693345.1	GCA_022693345.1_02485	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.42	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP093540.1	29232	30776
GCA_022693345.1	GCA_022693345.1_02525	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP093542.1	3806	5374
GCA_023110155.1	GCA_023110155.1_01529	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALDVL010000002.1	342488	344407
GCA_024295525.1	GCA_024295525.1_01118	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPM010000003.1	178927	180390
GCA_024295525.1	GCA_024295525.1_01119	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPM010000003.1	180510	181727
GCA_003584725.1	GCA_003584725.1_03779	aac(2)-Ie	aminoglycoside N-acetyltransferase AAC(2)-Ie	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	182	182	100.00	100.00	182	WP_010908954.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	NF000054.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	AP014567.1	3039111	3039659
GCA_022689205.1	GCA_022689205.1_00498	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXU010000017.1	5013	5432
GCA_022689205.1	GCA_022689205.1_00731	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXU010000001.1	90326	91399
GCA_022689205.1	GCA_022689205.1_00865	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXU010000001.1	234042	235334
GCA_022689205.1	GCA_022689205.1_01012	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCXU010000020.1	6395	7240
GCA_022689205.1	GCA_022689205.1_01013	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCXU010000020.1	7347	9104
GCA_022689205.1	GCA_022689205.1_01014	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCXU010000020.1	9094	9474
GCA_001066795.1	GCA_001066795.1_00458	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JUXY01000007.1	19668	20741
GCA_001066795.1	GCA_001066795.1_00675	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JUXY01000014.1	60622	61911
GCA_001066795.1	GCA_001066795.1_00800	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JUXY01000018.1	10359	11204
GCA_001066795.1	GCA_001066795.1_00801	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JUXY01000018.1	11311	13068
GCA_001066795.1	GCA_001066795.1_00802	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JUXY01000018.1	13058	13438
GCA_001066795.1	GCA_001066795.1_01173	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JUXY01000023.1	1427	2158
GCA_001066795.1	GCA_001066795.1_01174	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JUXY01000023.1	2284	3066
GCA_001066795.1	GCA_001066795.1_01203	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JUXY01000024.1	3649	4431
GCA_001066795.1	GCA_001066795.1_01204	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JUXY01000024.1	4557	5288
GCA_001066795.1	GCA_001066795.1_01213	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JUXY01000024.1	12025	12396
GCA_001066795.1	GCA_001066795.1_01214	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JUXY01000024.1	12396	14153
GCA_001066795.1	GCA_001066795.1_01215	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JUXY01000024.1	14253	16259
GCA_001066795.1	GCA_001066795.1_02010	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JUXY01000031.1	1724	3163
GCA_001066795.1	GCA_001066795.1_02066	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JUXY01000035.1	3822	4226
GCA_001066795.1	GCA_001066795.1_02067	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JUXY01000035.1	4443	5186
GCA_001697425.1	GCA_001697425.1_00572	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016650.1	583664	585043
GCA_001697425.1	GCA_001697425.1_01634	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016650.1	1664173	1665699
GCA_001697425.1	GCA_001697425.1_01833	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016650.1	1875418	1876986
GCA_001697425.1	GCA_001697425.1_01835	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016650.1	1877811	1878443
GCA_001697425.1	GCA_001697425.1_01836	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016650.1	1878851	1880089
GCA_001697425.1	GCA_001697425.1_01962	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016650.1	2014481	2015386
GCA_003693265.1	GCA_003693265.1_00921	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.10	45.01	471	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	RDRE01000002.1	65476	66897
GCA_003693265.1	GCA_003693265.1_02379	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RDRE01000009.1	67915	68769
GCA_963394835.1	GCA_963394835.1_00377	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPQ010000004.1	10870	12249
GCA_963394835.1	GCA_963394835.1_02103	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	86.59	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAUJPQ010000065.1	8833	10311
GCA_002096935.1	GCA_002096935.1_00253	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	NCVM01000026.1	236677	237894
GCA_002096935.1	GCA_002096935.1_00254	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	NCVM01000026.1	238014	239477
GCA_002096935.1	GCA_002096935.1_00387	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	NCVM01000026.1	405398	406597
GCA_002096935.1	GCA_002096935.1_01272	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.12	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NCVM01000027.1	285906	287564
GCA_015839035.1	GCA_015839035.1_01282	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP046355.1	1219400	1220137
GCA_015839035.1	GCA_015839035.1_01293	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP046355.1	1230055	1231974
GCA_015839035.1	GCA_015839035.1_01361	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP046355.1	1291175	1292374
GCA_000220085.2	GCA_000220085.2_00272	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.74	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AFQV01000024.1	23702	24901
GCA_000220085.2	GCA_000220085.2_01407	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AFQV01000013.1	96454	97671
GCA_900454435.1	GCA_900454435.1_00438	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	UGRT01000002.1	195629	197008
GCA_003397615.1	GCA_003397615.1_00474	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	QJUU01000001.1	557850	559328
GCA_003397615.1	GCA_003397615.1_00661	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	QJUU01000001.1	778705	780168
GCA_003397615.1	GCA_003397615.1_00663	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	250	405	60.00	100.00	243	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NA	NA	QJUU01000001.1	780754	781506
GCA_013522795.1	GCA_013522795.1_00448	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family B	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	183	186	91.94	64.33	171	AAN67541.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	NF040504.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	JAAMQY010000011.1	189291	189842
GCA_013522795.1	GCA_013522795.1_00996	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	954	949	100.00	93.50	954	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	JAAMQY010000019.1	8087	10951
GCA_013522795.1	GCA_013522795.1_01092	blaLUT	LUT family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	296	296	100.00	99.32	296	WP_010798607.1	extended-spectrum class A beta-lactamase LUT-1	NF000324.2	LUT family class A beta-lactamase	JAAMQY010000001.1	87074	87964
GCA_013522795.1	GCA_013522795.1_02098	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	58.62	261	WP_003161096.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	JAAMQY010000002.1	212026	212808
GCA_013522795.1	GCA_013522795.1_02692	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	410	414	95.89	71.11	398	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	JAAMQY010000003.1	104616	105848
GCA_013522795.1	GCA_013522795.1_04335	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	135	98.52	69.17	133	WP_003082280.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	JAAMQY010000006.1	191270	191677
GCA_947000095.1	GCA_947000095.1_01260	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAMQFS010000021.1	42527	43327
GCA_947000095.1	GCA_947000095.1_01591	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAMQFS010000030.1	37482	38447
GCA_947000095.1	GCA_947000095.1_01648	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	44.66	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAMQFS010000033.1	2326	2652
GCA_947000095.1	GCA_947000095.1_01745	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CAMQFS010000036.1	5191	7116
GCA_947000095.1	GCA_947000095.1_02200	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAMQFS010000062.1	532	2451
GCA_947000095.1	GCA_947000095.1_02563	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	592	593	99.83	99.32	592	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CAMQFS010000106.1	1870	3648
GCA_021497065.1	GCA_021497065.1_00086	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP040732.1	80096	81388
GCA_021497065.1	GCA_021497065.1_00090	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040732.1	85071	85418
GCA_021497065.1	GCA_021497065.1_00137	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.64	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP040732.1	134404	135696
GCA_021497065.1	GCA_021497065.1_02286	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP040734.1	18851	20317
GCA_021497065.1	GCA_021497065.1_02289	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP040734.1	22122	22502
GCA_021497065.1	GCA_021497065.1_02290	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP040734.1	22492	24249
GCA_021497065.1	GCA_021497065.1_02291	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP040734.1	24356	25201
GCA_021497065.1	GCA_021497065.1_02294	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	PARTIALP	110	161	61.49	98.99	99	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NA	NA	CP040734.1	26801	27133
GCA_030540895.1	GCA_030540895.1_00315	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JARWBN010000001.1	281624	282265
GCA_030540895.1	GCA_030540895.1_01193	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JARWBN010000010.1	1944	2267
GCA_030540895.1	GCA_030540895.1_01325	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.38	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JARWBN010000002.1	127831	129120
GCA_030540895.1	GCA_030540895.1_01328	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JARWBN010000002.1	131286	131633
GCA_030540895.1	GCA_030540895.1_02247	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JARWBN010000006.1	645	1205
GCA_030540895.1	GCA_030540895.1_02248	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JARWBN010000006.1	1389	2933
GCA_030540895.1	GCA_030540895.1_02267	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JARWBN010000006.1	19438	20283
GCA_030540895.1	GCA_030540895.1_02268	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JARWBN010000006.1	20390	22147
GCA_030540895.1	GCA_030540895.1_02269	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JARWBN010000006.1	22137	22517
GCA_030540895.1	GCA_030540895.1_02272	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	JARWBN010000007.1	1833	3401
GCA_006439165.1	GCA_006439165.1_01803	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	SDPF01000012.1	52053	53447
GCA_005502985.1	GCA_005502985.1_00036	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	522	522	100.00	97.32	522	WP_002440627.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	SCOZ01000012.1	4133	5701
GCA_005502985.1	GCA_005502985.1_00045	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	SCOZ01000014.1	197	592
GCA_005502985.1	GCA_005502985.1_00046	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.74	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	SCOZ01000014.1	609	1901
GCA_005502985.1	GCA_005502985.1_01203	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	SCOZ01000002.1	194777	195199
GCA_005502985.1	GCA_005502985.1_01253	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	SCOZ01000002.1	254402	255475
GCA_005502985.1	GCA_005502985.1_02277	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	SCOZ01000006.1	22093	23382
GCA_001815865.1	GCA_001815865.1_00910	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV822202.1	60558	61775
GCA_001815865.1	GCA_001815865.1_00911	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV822202.1	61895	63358
GCA_020560885.1	GCA_020560885.1_00222	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.15	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAJCND010000010.1	9941	11677
GCA_020560885.1	GCA_020560885.1_00223	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.91	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAJCND010000010.1	11679	13403
GCA_020560885.1	GCA_020560885.1_01170	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAJCND010000003.1	28399	29862
GCA_020560885.1	GCA_020560885.1_01171	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAJCND010000003.1	29982	31199
GCA_017654245.1	GCA_017654245.1_00967	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	146	146	100.00	100.00	146	WP_033639326.1	aminoglycoside 6-N-acetyltransferase	NF000021.4	aminoglycoside 6-N-acetyltransferase	CP072199.1	1002004	1002444
GCA_017654245.1	GCA_017654245.1_01463	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	81.27	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP072199.1	1524795	1525697
GCA_017654245.1	GCA_017654245.1_02642	smdA	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	591	591	100.00	98.48	591	BAF79679.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	NA	NA	CP072199.1	2754781	2756556
GCA_017654245.1	GCA_017654245.1_02643	smdB	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	592	592	100.00	98.65	592	BAF79680.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	NA	NA	CP072199.1	2756549	2758327
GCA_017654245.1	GCA_017654245.1_02658	sdeY	multidrug efflux RND transporter permease subunit SdeY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1048	1051	99.43	95.70	1046	BAC77251.1	multidrug efflux RND transporter permease subunit SdeY	NA	NA	CP072199.1	2767617	2770763
GCA_017654245.1	GCA_017654245.1_03546	sdeB	multidrug efflux RND transporter permease subunit SdeB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1047	1047	100.00	99.62	1047	AAO18187.2	multidrug efflux RND transporter permease subunit SdeB	NA	NA	CP072199.1	3673232	3676375
GCA_017654245.1	GCA_017654245.1_03547	sdeA	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	395	395	100.00	99.75	395	AAS55383.1	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	CP072199.1	3676400	3677587
GCA_017654245.1	GCA_017654245.1_03886	blaSRT	SRT/SST family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	378	378	100.00	99.47	378	WP_063864750.1	cephalosporin-hydrolyzing class C beta-lactamase SST-1	NF000423.2	SRT/SST family class C beta-lactamase	CP072199.1	4000901	4002037
GCA_017654245.1	GCA_017654245.1_04119	tet(41)	tetracycline efflux MFS transporter Tet(41)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	388	393	98.73	95.62	388	WP_063855881.1	tetracycline efflux MFS transporter Tet(41)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP072199.1	4270348	4271514
GCA_017654245.1	GCA_017654245.1_04203	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	91	102	90.20	71.58	95	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP072199.1	4360583	4360858
GCA_017654245.1	GCA_017654245.1_04217	ssmE	multidrug efflux SMR transporter SsmE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	106	110	96.36	100.00	106	BAF80121.1	multidrug efflux SMR transporter SsmE	NA	NA	CP072199.1	4375986	4376306
GCA_017654245.1	GCA_017654245.1_04319	smfY	multidrug efflux MFS transporter SmfY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	490	490	100.00	98.37	490	BAE79899.1	multidrug efflux MFS transporter SmfY	NA	NA	CP072199.1	4491772	4493244
GCA_017654245.1	GCA_017654245.1_04466	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	139	98.56	67.15	137	WP_004857515.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP072199.1	4633338	4633745
GCA_030176395.1	GCA_030176395.1_02180	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUF010000008.1	111122	111976
GCA_006094915.1	GCA_006094915.1_00086	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP035101.1	101725	103083
GCA_006094915.1	GCA_006094915.1_00289	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP035101.1	332539	333894
GCA_006094915.1	GCA_006094915.1_00327	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP035101.1	367069	367680
GCA_006094915.1	GCA_006094915.1_01572	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP035101.1	1630139	1630891
GCA_006094915.1	GCA_006094915.1_01745	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP035101.1	1823028	1824320
GCA_006094915.1	GCA_006094915.1_01787	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP035101.1	1861562	1862278
GCA_006094915.1	GCA_006094915.1_01790	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP035101.1	1864053	1864775
GCA_006094915.1	GCA_006094915.1_01791	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	99.57	235	ABD31004.1	serine protease SplA	NA	NA	CP035101.1	1864900	1865607
GCA_006094915.1	GCA_006094915.1_01801	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP035101.1	1877256	1878239
GCA_006094915.1	GCA_006094915.1_01802	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP035101.1	1878241	1879161
GCA_006094915.1	GCA_006094915.1_01978	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP035101.1	2025472	2025606
GCA_006094915.1	GCA_006094915.1_02127	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP035101.1	2180121	2181563
GCA_006094915.1	GCA_006094915.1_02302	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP035101.1	2333498	2333917
GCA_006094915.1	GCA_006094915.1_02389	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP035101.1	2423159	2424124
GCA_006094915.1	GCA_006094915.1_02390	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP035101.1	2424692	2425639
GCA_006094915.1	GCA_006094915.1_02391	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP035101.1	2425641	2426618
GCA_006094915.1	GCA_006094915.1_02467	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1371	1115	61.43	99.12	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP035101.1	2503975	2508090
GCA_006094915.1	GCA_006094915.1_02611	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP035101.1	2665870	2667399
GCA_006094915.1	GCA_006094915.1_02645	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP035101.1	2710733	2711785
GCA_006094915.1	GCA_006094915.1_02703	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP035102.1	8560	8955
GCA_006094915.1	GCA_006094915.1_02704	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.53	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP035102.1	8973	10262
GCA_006094915.1	GCA_006094915.1_02705	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP035102.1	10262	10576
GCA_006094915.1	GCA_006094915.1_02714	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	CP035102.1	17537	18970
GCA_000739375.1	GCA_000739375.1_02478	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	302	97.02	52.03	296	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP006704.1	2678938	2679843
GCA_000739375.1	GCA_000739375.1_03369	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	239	275	86.91	63.60	239	WP_268871878.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP006704.1	3635638	3636357
GCA_000739375.1	GCA_000739375.1_05309	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	69.85	136	WP_003082280.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP006704.1	5714763	5715173
GCA_019329325.1	GCA_019329325.1_00826	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073821.1	806409	806894
GCA_019329325.1	GCA_019329325.1_00829	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073821.1	808650	810089
GCA_019329325.1	GCA_019329325.1_00950	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073821.1	885717	886358
GCA_019329325.1	GCA_019329325.1_00971	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073821.1	905178	906023
GCA_019329325.1	GCA_019329325.1_00972	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073821.1	906130	907887
GCA_019329325.1	GCA_019329325.1_00973	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073821.1	907877	908257
GCA_019329325.1	GCA_019329325.1_02463	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073821.1	2423331	2424398
GCA_019329325.1	GCA_019329325.1_02514	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073821.1	2482196	2482432
GCA_019329325.1	GCA_019329325.1_02592	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073821.1	2565069	2565416
GCA_019329325.1	GCA_019329325.1_02595	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073821.1	2567585	2568883
GCA_019329325.1	GCA_019329325.1_02605	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073821.1	2577669	2578319
GCA_019329325.1	GCA_019329325.1_02606	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073821.1	2578401	2580044
GCA_019329325.1	GCA_019329325.1_02607	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073821.1	2580102	2580440
GCA_019329325.1	GCA_019329325.1_02653	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073821.1	2619406	2619777
GCA_019329325.1	GCA_019329325.1_02654	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073821.1	2619777	2621534
GCA_019329325.1	GCA_019329325.1_02655	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073821.1	2621634	2623640
GCA_019329325.1	GCA_019329325.1_02749	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073822.1	4436	5980
GCA_019329325.1	GCA_019329325.1_02750	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073822.1	6165	6725
GCA_900626155.1	GCA_900626155.1_01062	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	123	123	100.00	50.00	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LR130844.1	1025528	1025899
GCA_900626155.1	GCA_900626155.1_01633	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	LR130844.1	1630637	1631368
GCA_002578705.1	GCA_002578705.1_01228	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NBIR01000017.1	42368	42778
GCA_009717055.1	GCA_009717055.1_00352	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMXU01000001.1	308502	309719
GCA_009717055.1	GCA_009717055.1_00353	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMXU01000001.1	309839	311302
GCA_009717055.1	GCA_009717055.1_00358	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMXU01000001.1	313169	313597
GCA_019703545.1	GCA_019703545.1_01689	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.78	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018771.1	1650634	1652028
GCA_943912895.1	GCA_943912895.1_00461	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CALTUU010000001.1	493475	494899
GCA_943912895.1	GCA_943912895.1_00465	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	45.53	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CALTUU010000001.1	497334	497702
GCA_943912895.1	GCA_943912895.1_01185	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CALTUU010000004.1	5068	5922
GCA_001563595.1	GCA_001563595.1_01441	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KQ961837.1	32254	34173
GCA_001563595.1	GCA_001563595.1_01459	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	KQ961837.1	53242	53973
GCA_002096575.1	GCA_002096575.1_01853	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	NCUQ01000008.1	42328	42756
GCA_002096575.1	GCA_002096575.1_01920	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	NCUQ01000008.1	99583	100800
GCA_002096575.1	GCA_002096575.1_01921	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	NCUQ01000008.1	100920	102383
GCA_002096575.1	GCA_002096575.1_01926	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	NCUQ01000008.1	104124	104552
GCA_018205675.1	GCA_018205675.1_02250	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255864.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JADRGY010000007.1	41140	42048
GCA_018205675.1	GCA_018205675.1_02251	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JADRGY010000007.1	42045	42587
GCA_018205675.1	GCA_018205675.1_02252	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JADRGY010000007.1	42680	43474
GCA_018205675.1	GCA_018205675.1_02263	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691746.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JADRGY010000007.1	50764	52683
GCA_018205675.1	GCA_018205675.1_02349	blaOXA-85	oxacillin-hydrolyzing class D beta-lactamase OXA-85	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	261	261	100.00	100.00	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	JADRGY010000008.1	27263	28048
GCA_018205675.1	GCA_018205675.1_02354	aadE	aminoglycoside 6-adenylyltransferase AadE	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	288	288	100.00	100.00	288	WP_001255868.1	aminoglycoside 6-adenylyltransferase AadE	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JADRGY010000008.1	31579	32445
GCA_018205675.1	GCA_018205675.1_02364	tet(40)	tetracycline efflux MFS transporter Tet(40)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	406	406	100.00	100.00	406	WP_009247026.1	tetracycline efflux MFS transporter Tet(40)	NF000049.1	tetracycline efflux MFS transporter Tet(40)	JADRGY010000008.1	40650	41870
GCA_018205675.1	GCA_018205675.1_02365	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_011187228.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JADRGY010000008.1	41921	43840
GCA_019928885.1	GCA_019928885.1_00327	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHZOQ010000001.1	325862	327781
GCA_030825475.1	GCA_030825475.1_00019	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	123	100.00	51.59	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAPJPW010000057.1	6451	6819
GCA_030825475.1	GCA_030825475.1_00803	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	100.00	46.77	124	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAPJPW010000017.1	27269	27634
GCA_005890255.1	GCA_005890255.1_00397	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	SOQH01000002.1	14570	14998
GCA_005890255.1	GCA_005890255.1_01776	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQH01000077.1	13754	14887
GCA_030228685.1	GCA_030228685.1_00646	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JASOZB010000001.1	90326	91399
GCA_030228685.1	GCA_030228685.1_00779	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASOZB010000001.1	233985	235277
GCA_030228685.1	GCA_030228685.1_00969	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASOZB010000022.1	87	467
GCA_030228685.1	GCA_030228685.1_00970	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASOZB010000022.1	457	2214
GCA_030228685.1	GCA_030228685.1_00971	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASOZB010000022.1	2321	3166
GCA_030228685.1	GCA_030228685.1_01677	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JASOZB010000004.1	184035	184454
GCA_003942385.1	GCA_003942385.1_00690	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RJMT01000003.1	73206	75125
GCA_003942385.1	GCA_003942385.1_01589	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJMT01000008.1	41527	41955
GCA_028326445.1	GCA_028326445.1_01756	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMMV010000007.1	70517	71248
GCA_028326445.1	GCA_028326445.1_01873	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMMV010000009.1	49644	51563
GCA_003966505.1	GCA_003966505.1_00874	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AP018937.1	842789	843988
GCA_003966505.1	GCA_003966505.1_01080	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	AP018937.1	1044241	1044978
GCA_003966505.1	GCA_003966505.1_01081	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.22	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AP018937.1	1045903	1047822
GCA_003966505.1	GCA_003966505.1_01106	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	AP018937.1	1074112	1074762
GCA_015273475.1	GCA_015273475.1_01706	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGRA010000004.1	287287	288579
GCA_015273475.1	GCA_015273475.1_02475	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACGRA010000012.1	1384	1944
GCA_015273475.1	GCA_015273475.1_02476	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACGRA010000012.1	2128	3672
GCA_015273475.1	GCA_015273475.1_02532	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGRA010000018.1	661	1146
GCA_026660275.1	GCA_026660275.1_00730	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	520	522	100.00	97.51	522	WP_032489639.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	JANSKY010000026.1	1357	2919
GCA_026660275.1	GCA_026660275.1_01577	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	52.01	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JANSKY010000004.1	520652	521704
GCA_026660275.1	GCA_026660275.1_01703	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	75.36	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JANSKY010000004.1	664012	664431
GCA_026660275.1	GCA_026660275.1_02277	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANSKY010000009.1	4364	4711
GCA_026660275.1	GCA_026660275.1_02281	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	95.10	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JANSKY010000009.1	8397	9686
GCA_007990405.1	GCA_007990405.1_01829	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.29	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AP019835.1	1920362	1921840
GCA_018292165.1	GCA_018292165.1_01746	cblA	CblA family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	296	296	100.00	98.99	296	WP_005827792.1	CblA family class A beta-lactamase	NF033098.1	CblA family class A beta-lactamase	CP072255.1	1941292	1942182
GCA_016889765.1	GCA_016889765.1_01780	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP069533.1	1864998	1866440
GCA_028328065.1	GCA_028328065.1_01455	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMNK010000005.1	17633	19552
GCA_028328065.1	GCA_028328065.1_01475	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMNK010000005.1	39711	40442
GCA_001008225.1	GCA_001008225.1_01644	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LCTJ01000066.1	49830	51224
GCA_000010485.1	GCA_000010485.1_00292	fdeC	inverse autotransporter adhesin FdeC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1415	1416	100.00	96.82	1416	ABE05822.1	inverse autotransporter adhesin FdeC	NA	NA	AP009378.1	305923	310170
GCA_000010485.1	GCA_000010485.1_01125	emrE	multidrug efflux SMR transporter EmrE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	110	110	100.00	99.09	110	CAA77936.1	multidrug efflux SMR transporter EmrE	NF042984.1	multidrug efflux SMR transporter EmrE	AP009378.1	1151664	1151996
GCA_000010485.1	GCA_000010485.1_01178	ariR	biofilm/acid-resistance regulator AriR	plus	STRESS	ACID	NA	NA	BLASTP	88	88	100.00	97.73	88	AAC74250.1	biofilm/acid-resistance regulator AriR	NA	NA	AP009378.1	1196785	1197051
GCA_000010485.1	GCA_000010485.1_01541	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	BLASTP	102	102	100.00	98.04	102	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	AP009378.1	1572307	1572615
GCA_000010485.1	GCA_000010485.1_01880	emrE	multidrug efflux SMR transporter EmrE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	110	110	100.00	98.18	110	CAA77936.1	multidrug efflux SMR transporter EmrE	NF042984.1	multidrug efflux SMR transporter EmrE	AP009378.1	1899320	1899652
GCA_000010485.1	GCA_000010485.1_01923	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.33	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	AP009378.1	1935240	1937042
GCA_000010485.1	GCA_000010485.1_01924	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	570	600	95.00	99.47	570	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	AP009378.1	1937029	1938741
GCA_000010485.1	GCA_000010485.1_02489	sinH	intimin-like inverse autotransporter SinH	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	724	730	99.86	72.60	730	AAL21411.1	intimin-like inverse autotransporter SinH	NF033423.1	intimin-like inverse autotransporter SinH	AP009378.1	2560653	2562827
GCA_000010485.1	GCA_000010485.1_02968	sslE	lipoprotein metalloprotease SslE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1520	1520	100.00	92.37	1520	ADE89421.1	lipoprotein metalloprotease SslE	NF037973.1	lipoprotein metalloprotease SslE	AP009378.1	3057381	3061943
GCA_000010485.1	GCA_000010485.1_03279	acrF	multidrug efflux RND transporter permease subunit AcrF	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1034	1034	100.00	99.42	1034	AAC76298.1	multidrug efflux RND transporter permease subunit AcrF	NA	NA	AP009378.1	3373917	3377021
GCA_000010485.1	GCA_000010485.1_03515	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	92.20	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	AP009378.1	3597932	3598357
GCA_000010485.1	GCA_000010485.1_03721	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	98.73	394	BAE77620.1	multidrug efflux MFS transporter EmrD	NA	NA	AP009378.1	3816443	3817627
GCA_000010485.1	GCA_000010485.1_03998	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	100.00	99.33	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	AP009378.1	4094866	4095768
GCA_000010485.1	GCA_000010485.1_04298	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	334	377	88.59	99.10	334	AAZ85965.1	cephalosporin-hydrolyzing class C beta-lactamase EC-5	NF012173.1	CMY2/MIR/ACT/EC family class C beta-lactamase	AP009378.1	4409298	4410302
GCA_000010485.1	GCA_000010485.1_04552	mdtM	multidrug efflux MFS transporter MdtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	419	410	98.29	97.52	403	AAC77293.1	multidrug efflux MFS transporter MdtM	NA	NA	AP009378.1	4661103	4662362
GCA_000010485.1	GCA_000010485.1_04711	senB	enterotoxin production-related protein TieB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	391	391	100.00	100.00	391	AAZ89288.1	enterotoxin production-related protein TieB	NA	NA	AP009379.1	76313	77488
GCA_010365865.1	GCA_010365865.1_00102	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	93.21	66.02	206	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP048020.1	106554	107201
GCA_023110515.1	GCA_023110515.1_00294	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JALDWD010000001.1	260246	261445
GCA_023110515.1	GCA_023110515.1_00470	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDWD010000001.1	447416	448879
GCA_023110515.1	GCA_023110515.1_00471	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDWD010000001.1	448999	450216
GCA_000195595.1	GCA_000195595.1_00179	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	267	246	99.19	60.08	253	WP_038563636.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	GL882511.1	9208	10011
GCA_962724695.1	GCA_962724695.1_00005	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIYS010000001.1	5799	6704
GCA_962724695.1	GCA_962724695.1_00289	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIYS010000002.1	112396	113922
GCA_962724695.1	GCA_962724695.1_00415	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIYS010000003.1	63656	65035
GCA_962724695.1	GCA_962724695.1_01421	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	251	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIYS010000015.1	20862	21617
GCA_962724695.1	GCA_962724695.1_01422	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIYS010000015.1	21734	22972
GCA_000159955.1	GCA_000159955.1_04665	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	494	99.60	65.04	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	GG695970.1	637053	638531
GCA_002861385.2	GCA_002861385.2_00076	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	196	253	64.03	100.00	162	WP_011116967.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NA	NA	PKHR02000002.1	22790	23380
GCA_002861385.2	GCA_002861385.2_01580	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PKHR02000016.1	203835	205259
GCA_022347295.1	GCA_022347295.1_00608	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRDW010000018.1	41111	42535
GCA_903909965.1	GCA_903909965.1_00700	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	LR822045.1	696337	697554
GCA_903909965.1	GCA_903909965.1_00701	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	LR822045.1	697674	699137
GCA_018127825.1	GCA_018127825.1_02087	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP072338.1	120575	121540
GCA_024791515.1	GCA_024791515.1_00059	blaMUN-1	MUN family extended-spectrum class A beta-lactamase MUN-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	302	302	100.00	100.00	302	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	JANUMK010000001.1	45616	46524
GCA_024791515.1	GCA_024791515.1_00754	blaMUN-1	MUN family extended-spectrum class A beta-lactamase MUN-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	302	302	100.00	100.00	302	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	JANUMK010000001.1	605382	606290
GCA_024791515.1	GCA_024791515.1_00877	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.38	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUMK010000001.1	703034	704959
GCA_024791515.1	GCA_024791515.1_01978	blaMUN-1	MUN family extended-spectrum class A beta-lactamase MUN-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	302	302	100.00	100.00	302	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	JANUMK010000001.1	1617827	1618735
GCA_024791515.1	GCA_024791515.1_02800	blaMUN-1	MUN family extended-spectrum class A beta-lactamase MUN-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	302	302	100.00	100.00	302	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	JANUMK010000001.1	2303132	2304040
GCA_024791515.1	GCA_024791515.1_03851	blaMUN-1	MUN family extended-spectrum class A beta-lactamase MUN-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	302	302	100.00	100.00	302	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	JANUMK010000001.1	3255773	3256681
GCA_002689225.1	GCA_002689225.1_01561	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	754	631	85.90	42.47	551	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NZFD01000044.1	25672	27936
GCA_002689225.1	GCA_002689225.1_02451	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	277	272	99.26	59.35	278	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	NZFD01000026.1	6875	7708
GCA_029023945.1	GCA_029023945.1_00029	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP118979.1	32060	33349
GCA_029023945.1	GCA_029023945.1_00127	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP118979.1	138126	139418
GCA_029023945.1	GCA_029023945.1_02471	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	PARTIALP	88	122	72.13	96.59	88	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP118980.1	14945	15211
GCA_014069095.1	GCA_014069095.1_00466	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	287	285	97.54	40.49	284	WP_063864745.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	CP059684.1	451010	451873
GCA_014069095.1	GCA_014069095.1_00698	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	397	97.98	77.38	389	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP059684.1	683014	684201
GCA_014069095.1	GCA_014069095.1_02707	blaOXA-966	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-966	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	273	273	100.00	100.00	273	WP_005405099.1	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-966	NF000266.2	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase	CP059684.1	2818300	2819121
GCA_000012825.1	GCA_000012825.1_03365	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.36	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP000139.1	4086151	4087110
GCA_000012825.1	GCA_000012825.1_04311	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	43.69	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP000139.1	5152700	5153026
GCA_000431415.1	GCA_000431415.1_00282	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HF990895.1	528	1259
GCA_905197865.1	GCA_905197865.1_01085	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	99.48	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	CAJKAL010000005.1	75509	77248
GCA_905197865.1	GCA_905197865.1_01086	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	93.26	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	CAJKAL010000005.1	77245	78984
GCA_905197865.1	GCA_905197865.1_01572	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	221	245	90.20	99.10	221	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAJKAL010000011.1	56932	57597
GCA_022569055.1	GCA_022569055.1_00363	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKK010000001.1	345086	345505
GCA_022569055.1	GCA_022569055.1_00980	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKK010000002.1	146127	147200
GCA_022569055.1	GCA_022569055.1_01122	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKK010000002.1	298259	299551
GCA_000253215.1	GCA_000253215.1_00762	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	FR774048.1	754454	755833
GCA_000253215.1	GCA_000253215.1_01497	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	FR774048.1	1500673	1501578
GCA_000253215.1	GCA_000253215.1_01675	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.82	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	FR774048.1	1672793	1674031
GCA_000253215.1	GCA_000253215.1_01676	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.14	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	FR774048.1	1674435	1675067
GCA_000253215.1	GCA_000253215.1_01678	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.36	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	FR774048.1	1675889	1677457
GCA_000253215.1	GCA_000253215.1_01932	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.21	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	FR774048.1	1919819	1921345
GCA_001588695.1	GCA_001588695.1_00043	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LAWI01000001.1	45040	46698
GCA_024330365.1	GCA_024330365.1_02213	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	99.18	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	JANDWZ010000043.1	12784	13518
GCA_024330365.1	GCA_024330365.1_02541	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANDWZ010000059.1	92	1057
GCA_916048815.1	GCA_916048815.1_00141	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAJZHX010000001.1	140192	141832
GCA_000173915.1	GCA_000173915.1_00863	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	ACDZ02000009.1	19147	20787
GCA_014841035.1	GCA_014841035.1_00996	tet(O/W/32/O)	tetracycline resistance ribosomal protection mosaic protein Tet(O/W/32/O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856419.1	tetracycline resistance ribosomal protection mosaic protein Tet(O/W/32/O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP062068.1	972583	974502
GCA_014841035.1	GCA_014841035.1_01785	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP062068.1	1721847	1722584
GCA_014841035.1	GCA_014841035.1_01802	fexA	chloramphenicol/florfenicol efflux MFS transporter FexA	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	475	475	100.00	97.47	475	WP_015585966.1	chloramphenicol/florfenicol efflux MFS transporter FexA	NF000218.1	chloramphenicol/florfenicol efflux MFS transporter FexA	CP062068.1	1736211	1737638
GCA_003944105.1	GCA_003944105.1_00982	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJPB01000003.1	134152	134580
GCA_031203395.1	GCA_031203395.1_00720	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691746.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP101993.1	634673	636592
GCA_031203395.1	GCA_031203395.1_01428	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP101993.1	1333511	1334242
GCA_001095405.3	GCA_001095405.3_01016	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	OX244288.1	953689	954888
GCA_001095405.3	GCA_001095405.3_01597	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	OX244288.1	1508623	1509840
GCA_001095405.3	GCA_001095405.3_01598	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	OX244288.1	1509960	1511423
GCA_000738305.1	GCA_000738305.1_01717	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.07	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JFCP01000030.1	206886	208307
GCA_030845015.1	GCA_030845015.1_01241	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JASNMH010000001.1	1277018	1277464
GCA_030845015.1	GCA_030845015.1_01620	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNMH010000001.1	1692883	1693737
GCA_030845015.1	GCA_030845015.1_01633	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASNMH010000001.1	1706350	1708269
GCA_030845015.1	GCA_030845015.1_01973	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASNMH010000001.1	2067817	2069259
GCA_015557775.1	GCA_015557775.1_01695	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADNOY010000005.1	168049	169512
GCA_015557775.1	GCA_015557775.1_01696	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADNOY010000005.1	169632	170849
GCA_015557775.1	GCA_015557775.1_02112	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JADNOY010000009.1	16651	18387
GCA_015557775.1	GCA_015557775.1_02113	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.56	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JADNOY010000009.1	18389	20113
GCA_000009665.1	GCA_000009665.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	BA000017.4	40198	40602
GCA_000009665.1	GCA_000009665.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	BA000017.4	40819	41562
GCA_000009665.1	GCA_000009665.1_00041	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	BA000017.4	44992	46998
GCA_000009665.1	GCA_000009665.1_00042	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	BA000017.4	47098	48855
GCA_000009665.1	GCA_000009665.1_00043	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	123	123	100.00	99.19	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	BA000017.4	48855	49226
GCA_000009665.1	GCA_000009665.1_00052	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BA000017.4	55963	56694
GCA_000009665.1	GCA_000009665.1_00053	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BA000017.4	56820	57602
GCA_000009665.1	GCA_000009665.1_00134	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	BA000017.4	151595	152953
GCA_000009665.1	GCA_000009665.1_00332	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	BA000017.4	380458	381813
GCA_000009665.1	GCA_000009665.1_00370	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	BA000017.4	415119	415730
GCA_000009665.1	GCA_000009665.1_00400	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	BA000017.4	439865	441784
GCA_000009665.1	GCA_000009665.1_01715	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BA000017.4	1762257	1762988
GCA_000009665.1	GCA_000009665.1_01716	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BA000017.4	1763114	1763896
GCA_000009665.1	GCA_000009665.1_01840	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BA000017.4	1908931	1910223
GCA_000009665.1	GCA_000009665.1_01879	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	BA000017.4	1941356	1942078
GCA_000009665.1	GCA_000009665.1_01880	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	BA000017.4	1942203	1942910
GCA_000009665.1	GCA_000009665.1_01885	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	BA000017.4	1947040	1948023
GCA_000009665.1	GCA_000009665.1_01886	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	BA000017.4	1948025	1948960
GCA_000009665.1	GCA_000009665.1_01894	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	BA000017.4	1955162	1955917
GCA_000009665.1	GCA_000009665.1_01895	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	BA000017.4	1955956	1956351
GCA_000009665.1	GCA_000009665.1_01897	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	BA000017.4	1956881	1957609
GCA_000009665.1	GCA_000009665.1_01898	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	BA000017.4	1957644	1958363
GCA_000009665.1	GCA_000009665.1_01899	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	BA000017.4	1958644	1959408
GCA_000009665.1	GCA_000009665.1_02053	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	BA000017.4	2084317	2084667
GCA_000009665.1	GCA_000009665.1_02057	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	BA000017.4	2086164	2086655
GCA_000009665.1	GCA_000009665.1_02061	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	BA000017.4	2088364	2089137
GCA_000009665.1	GCA_000009665.1_02123	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	BA000017.4	2133592	2134314
GCA_000009665.1	GCA_000009665.1_02124	sec3	staphylococcal enterotoxin type C3	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	BAB43097.1	staphylococcal enterotoxin type C3	NA	NA	BA000017.4	2134483	2135283
GCA_000009665.1	GCA_000009665.1_02126	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	99.15	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	BA000017.4	2137509	2138213
GCA_000009665.1	GCA_000009665.1_02151	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	BA000017.4	2155506	2155640
GCA_000009665.1	GCA_000009665.1_02296	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	BA000017.4	2307263	2308705
GCA_000009665.1	GCA_000009665.1_02469	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	BA000017.4	2458828	2459247
GCA_000009665.1	GCA_000009665.1_02555	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	BA000017.4	2549070	2550035
GCA_000009665.1	GCA_000009665.1_02556	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	BA000017.4	2550602	2551549
GCA_000009665.1	GCA_000009665.1_02557	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.23	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	BA000017.4	2551551	2552528
GCA_000009665.1	GCA_000009665.1_02787	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	BA000017.4	2791715	2793244
GCA_000009665.1	GCA_000009665.1_02821	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	BA000017.4	2836574	2837626
GCA_000009665.1	GCA_000009665.1_02887	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	AP003367.1	17224	18663
GCA_000009665.1	GCA_000009665.1_02891	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	AP003367.1	20849	21409
GCA_000009665.1	GCA_000009665.1_02892	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	AP003367.1	21593	23137
GCA_001067345.1	GCA_001067345.1_01172	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JUSX01000184.1	4625	6283
GCA_000425825.1	GCA_000425825.1_00953	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	100.00	73.38	139	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AUEE01000005.1	3435	3854
GCA_000425825.1	GCA_000425825.1_02125	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	100.00	74.77	218	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	AUEE01000016.1	14070	14723
GCA_000425825.1	GCA_000425825.1_02126	merR2	mercury resistance transcriptional regulator MerR2	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	129	129	99.22	83.59	128	AAD25959.1	mercury resistance transcriptional regulator MerR2	NA	NA	AUEE01000016.1	14856	15245
GCA_000425825.1	GCA_000425825.1_02128	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	547	98.35	73.47	539	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AUEE01000016.1	16126	17769
GCA_000425825.1	GCA_000425825.1_02183	vga	Vga family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	HMM	524	522	99.81	55.09	521	WP_012779620.1	Vga family ABC-F type ribosomal protection protein	NF000170.2	Vga family ABC-F type ribosomal protection protein	AUEE01000017.1	28667	30241
GCA_019733955.1	GCA_019733955.1_01245	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAASHV010000002.1	450700	452619
GCA_030176135.1	GCA_030176135.1_00511	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVB010000018.1	44042	44896
GCA_030053195.1	GCA_030053195.1_02078	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	639	100.00	99.06	641	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP125630.1	2631	4556
GCA_030053195.1	GCA_030053195.1_02123	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP125633.1	7513	9432
GCA_015679905.1	GCA_015679905.1_00446	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030825.1	457131	458510
GCA_015679905.1	GCA_015679905.1_01182	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP030825.1	1213362	1214267
GCA_015679905.1	GCA_015679905.1_01311	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030825.1	1349516	1350754
GCA_015679905.1	GCA_015679905.1_01312	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030825.1	1351158	1351790
GCA_015679905.1	GCA_015679905.1_01315	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030825.1	1353367	1354935
GCA_015679905.1	GCA_015679905.1_01506	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030825.1	1557837	1559363
GCA_009378915.1	GCA_009378915.1_00991	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCW01000004.1	56825	57766
GCA_003797385.1	GCA_003797385.1_02462	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	284	98.94	55.87	281	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	RKKA01000001.1	2720431	2721279
GCA_029691915.1	GCA_029691915.1_00255	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121513.1	263204	264493
GCA_029691915.1	GCA_029691915.1_00258	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP121513.1	266671	267018
GCA_029691915.1	GCA_029691915.1_00321	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP121513.1	335993	336421
GCA_029691915.1	GCA_029691915.1_01030	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121513.1	1057298	1058143
GCA_029691915.1	GCA_029691915.1_01031	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121513.1	1058250	1060007
GCA_029691915.1	GCA_029691915.1_01032	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121513.1	1059997	1060377
GCA_029691915.1	GCA_029691915.1_02320	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121513.1	2363217	2364509
GCA_029691915.1	GCA_029691915.1_02432	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP121514.1	3464	4930
GCA_029691915.1	GCA_029691915.1_02433	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP121514.1	5029	5928
GCA_029691915.1	GCA_029691915.1_02435	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP121514.1	7232	7792
GCA_029691915.1	GCA_029691915.1_02436	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	509	514	98.83	100.00	508	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP121514.1	7976	9505
GCA_029691915.1	GCA_029691915.1_02439	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP121514.1	11224	12663
GCA_001639025.1	GCA_001639025.1_01685	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	LXGG01000020.1	186120	186974
GCA_022485005.1	GCA_022485005.1_00380	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVDX010000015.1	1403	1795
GCA_022485005.1	GCA_022485005.1_00381	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVDX010000015.1	1813	3105
GCA_022485005.1	GCA_022485005.1_01195	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVDX010000002.1	12190	13482
GCA_022485005.1	GCA_022485005.1_01708	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKVDX010000004.1	1217	2857
GCA_019375935.1	GCA_019375935.1_00832	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCW010000001.1	218305	219495
GCA_019375935.1	GCA_019375935.1_02022	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCW010000046.1	2052	3977
GCA_019375935.1	GCA_019375935.1_02185	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCW010000054.1	2529	3329
GCA_019375935.1	GCA_019375935.1_02732	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	392	321	93.15	100.00	299	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCW010000009.1	101696	102874
GCA_016027055.1	GCA_016027055.1_02207	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	96.98	76.36	385	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP065666.1	2127803	2129023
GCA_016027055.1	GCA_016027055.1_03570	blaOXA-281	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-281	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_004697403.1	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-281	NF000417.2	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	CP065666.1	3515310	3516134
GCA_016725005.1	GCA_016725005.1_00718	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP068213.1	725198	727117
GCA_027686445.1	GCA_027686445.1_00388	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JAQCSR010000010.1	1900	2412
GCA_027686445.1	GCA_027686445.1_00389	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JAQCSR010000010.1	2437	3642
GCA_027686445.1	GCA_027686445.1_01815	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	296	100.00	63.85	296	WP_005827792.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAQCSR010000024.1	9870	10754
GCA_030252365.1	GCA_030252365.1_01159	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP126983.1	1328773	1329738
GCA_025150805.1	GCA_025150805.1_00053	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	61.36	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JALXTO010000001.1	56856	57284
GCA_025150805.1	GCA_025150805.1_00280	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	93.26	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	JALXTO010000001.1	271011	272750
GCA_025150805.1	GCA_025150805.1_00281	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	98.45	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	JALXTO010000001.1	272747	274486
GCA_000407285.1	GCA_000407285.1_00023	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	138	143	93.01	54.89	133	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	KE136522.1	18616	19032
GCA_000407285.1	GCA_000407285.1_00799	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	496	500	99.40	66.53	502	WP_002296175.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KE136523.1	613359	614849
GCA_000407285.1	GCA_000407285.1_01013	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	219	99.09	52.07	217	WP_063843219.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	KE136523.1	834185	834832
GCA_000407285.1	GCA_000407285.1_02164	vanS	vancomycin resistance histidine kinase VanS	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	374	376	96.81	56.99	365	WP_034869172.1	vancomycin resistance histidine kinase VanS	NF033091.0	vancomycin resistance histidine kinase VanS	KE136523.1	1947303	1948427
GCA_030218345.1	GCA_030218345.1_00713	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JASOPP010000001.1	195937	196719
GCA_030218345.1	GCA_030218345.1_00714	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JASOPP010000001.1	196845	197576
GCA_030218345.1	GCA_030218345.1_01995	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	52.01	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JASOPP010000003.1	180121	181173
GCA_000382805.1	GCA_000382805.1_00378	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	402	399	100.00	90.73	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CAUJ01000008.1	381115	382323
GCA_900447675.1	GCA_900447675.1_01296	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UFXV01000002.1	1326936	1328378
GCA_000277505.1	GCA_000277505.1_00075	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	92.07	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AJZT01000002.1	57381	58859
GCA_000277505.1	GCA_000277505.1_00080	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	AJZT01000002.1	61838	63757
GCA_001072295.1	GCA_001072295.1_01719	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.97	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVLU01000100.1	12899	14635
GCA_001072295.1	GCA_001072295.1_01720	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVLU01000100.1	14637	16361
GCA_014265215.1	GCA_014265215.1_00137	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMXQ010000013.1	16606	18150
GCA_014265215.1	GCA_014265215.1_00138	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMXQ010000013.1	18334	18894
GCA_014265215.1	GCA_014265215.1_00194	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMXQ010000016.1	7103	7450
GCA_014265215.1	GCA_014265215.1_00198	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXQ010000016.1	11133	12425
GCA_014265215.1	GCA_014265215.1_00215	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMXQ010000018.1	5352	5723
GCA_014265215.1	GCA_014265215.1_00216	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMXQ010000018.1	5723	7480
GCA_014265215.1	GCA_014265215.1_00217	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMXQ010000018.1	7580	9586
GCA_014265215.1	GCA_014265215.1_00228	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMXQ010000020.1	238	981
GCA_014265215.1	GCA_014265215.1_00229	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMXQ010000020.1	1198	1602
GCA_014265215.1	GCA_014265215.1_00235	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMXQ010000022.1	1475	2209
GCA_014265215.1	GCA_014265215.1_00912	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXQ010000005.1	41990	43282
GCA_014265215.1	GCA_014265215.1_00970	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMXQ010000006.1	10298	10678
GCA_014265215.1	GCA_014265215.1_00971	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMXQ010000006.1	10668	12425
GCA_014265215.1	GCA_014265215.1_00972	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMXQ010000006.1	12532	13377
GCA_014265215.1	GCA_014265215.1_01088	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMXQ010000007.1	45457	47097
GCA_030844995.1	GCA_030844995.1_00004	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASNMN010000001.1	2214	3995
GCA_030844995.1	GCA_030844995.1_00017	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNMN010000001.1	16857	17711
GCA_030844995.1	GCA_030844995.1_02521	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASNMN010000002.1	19666	21585
GCA_003254255.1	GCA_003254255.1_00343	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	78.66	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	QKZH01000003.1	108186	109664
GCA_004125815.1	GCA_004125815.1_00674	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	QFBE01000001.1	647687	648115
GCA_004125815.1	GCA_004125815.1_00905	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.01	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	QFBE01000001.1	898237	899973
GCA_004125815.1	GCA_004125815.1_00906	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	QFBE01000001.1	899975	901699
GCA_000511775.1	GCA_000511775.1_02737	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	79.67	43.88	98	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BAIU01000003.1	39032	39385
GCA_006742205.1	GCA_006742205.1_00062	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	AP019721.1	64037	64372
GCA_006742205.1	GCA_006742205.1_00063	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	547	547	100.00	99.82	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AP019721.1	64430	66073
GCA_006742205.1	GCA_006742205.1_00064	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	AP019721.1	66155	66805
GCA_006742205.1	GCA_006742205.1_00100	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP019721.1	100302	101591
GCA_006742205.1	GCA_006742205.1_00103	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP019721.1	103769	104116
GCA_006742205.1	GCA_006742205.1_00179	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	AP019721.1	189080	189508
GCA_006742205.1	GCA_006742205.1_00880	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AP019721.1	909442	910287
GCA_006742205.1	GCA_006742205.1_00881	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AP019721.1	910394	912151
GCA_006742205.1	GCA_006742205.1_00882	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AP019721.1	912141	912521
GCA_006742205.1	GCA_006742205.1_02354	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	AP019722.1	2709	4088
GCA_000211015.1	GCA_000211015.1_00950	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	371	371	100.00	100.00	371	EHE72460.1	multidrug efflux MFS transporter PmrA	NA	NA	FQ312043.1	884117	885232
GCA_020091365.1	GCA_020091365.1_01245	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP081901.1	1412130	1414055
GCA_020091365.1	GCA_020091365.1_01699	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	CP081901.1	1893424	1894287
GCA_020091365.1	GCA_020091365.1_01700	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	378	388	97.42	100.00	378	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	CP081901.1	1894463	1895599
GCA_020091365.1	GCA_020091365.1_01701	tet(X1)	tetracycline-inactivating monooxygenase Tet(X1)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	379	379	100.00	99.74	379	WP_204376222.1	tetracycline-inactivating monooxygenase Tet(X1)	NA	NA	CP081901.1	1895798	1896937
GCA_020091365.1	GCA_020091365.1_01703	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.25	266	WP_063844771.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP081901.1	1898842	1899642
GCA_020091365.1	GCA_020091365.1_01713	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP081901.1	1913638	1915563
GCA_020091365.1	GCA_020091365.1_02268	cfxA5	broad-spectrum class A beta-lactamase CfxA5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	321	321	100.00	99.69	321	WP_032946415.1	broad-spectrum class A beta-lactamase CfxA5	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP081901.1	2564366	2565331
GCA_003490235.1	GCA_003490235.1_00495	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQIR01000002.1	116488	117882
GCA_000257705.1	GCA_000257705.1_01814	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	AJGH01000082.1	17903	19822
GCA_000257705.1	GCA_000257705.1_02452	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	99.59	78.57	490	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AJGH01000119.1	34164	35642
GCA_025152065.1	GCA_025152065.1_00916	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.69	41.40	471	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXVZ010000165.1	956	2350
GCA_025152065.1	GCA_025152065.1_00997	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXVZ010000176.1	64	1464
GCA_005158025.1	GCA_005158025.1_00225	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP028835.1	243682	245121
GCA_005158025.1	GCA_005158025.1_02471	lsa(A)	ABC-F type ribosomal protection protein Lsa(A)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	498	498	100.00	99.20	498	WP_002387187.1	ABC-F type ribosomal protection protein Lsa(A)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP028835.1	2433659	2435155
GCA_005158025.1	GCA_005158025.1_02494	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP028835.1	2456989	2457486
GCA_005158025.1	GCA_005158025.1_02559	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	234	233	99.57	67.09	234	WP_003436401.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CP028835.1	2516141	2516845
GCA_005158025.1	GCA_005158025.1_02984	tcrB	copper-translocating P-type ATPase TcrB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	710	710	100.00	99.86	710	AAL05407.1	copper-translocating P-type ATPase TcrB	NA	NA	CP028836.1	5347	7479
GCA_005158025.1	GCA_005158025.1_03022	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP028836.1	37618	38355
GCA_005158025.1	GCA_005158025.1_03023	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP028836.1	39105	39899
GCA_005158025.1	GCA_005158025.1_03024	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP028836.1	39992	40534
GCA_005158025.1	GCA_005158025.1_03025	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP028836.1	40531	41439
GCA_005158025.1	GCA_005158025.1_03027	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP028836.1	41744	42481
GCA_005158025.1	GCA_005158025.1_03029	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	168	165	98.18	100.00	162	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP028836.1	43858	44364
GCA_005158025.1	GCA_005158025.1_03036	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP028836.1	48309	49046
GCA_005158025.1	GCA_005158025.1_03046	catA	type A-8 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	215	215	100.00	97.21	215	WP_002352254.1	type A-8 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP028836.1	57175	57822
GCA_005158025.1	GCA_005158025.1_03048	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP028836.1	58863	60239
GCA_005158025.1	GCA_005158025.1_03049	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_001574275.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP028836.1	60433	62352
GCA_005158025.1	GCA_005158025.1_03238	fexB	chloramphenicol/florfenicol efflux MFS transporter FexB	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	PARTIALP	288	469	51.39	98.34	241	WP_002415211.1	chloramphenicol/florfenicol efflux MFS transporter FexB	NA	NA	CP028839.1	11773	12639
GCA_005158025.1	GCA_005158025.1_03258	cfr	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	core	AMR	AMR	LINCOSAMIDE/OXAZOLIDINONE/PHENICOL/PLEUROMUTILIN/STREPTOGRAMIN	CHLORAMPHENICOL/CLINDAMYCIN/FLORFENICOL/LINEZOLID/STREPTOGRAMIN B/TIAMULIN/VIRGINIAMYCIN	BLASTP	349	349	100.00	99.43	349	WP_001010505.1	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	CP028840.1	9244	10293
GCA_002944995.1	GCA_002944995.1_00137	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP014119.1	106805	107185
GCA_002944995.1	GCA_002944995.1_00138	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP014119.1	107175	108932
GCA_002944995.1	GCA_002944995.1_00139	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP014119.1	109039	109884
GCA_002944995.1	GCA_002944995.1_00859	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP014119.1	845551	845979
GCA_002944995.1	GCA_002944995.1_00933	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP014119.1	935055	935402
GCA_002944995.1	GCA_002944995.1_00936	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP014119.1	937580	938869
GCA_002944995.1	GCA_002944995.1_01028	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP014119.1	1039488	1040474
GCA_002944995.1	GCA_002944995.1_01029	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP014119.1	1040574	1042580
GCA_002944995.1	GCA_002944995.1_02411	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP014118.1	7832	8212
GCA_002944995.1	GCA_002944995.1_02412	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP014118.1	8202	9959
GCA_002944995.1	GCA_002944995.1_02413	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP014118.1	10066	10911
GCA_002944995.1	GCA_002944995.1_02422	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	1024	1024	100.00	99.80	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP014118.1	18921	21995
GCA_000382445.1	GCA_000382445.1_01156	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	PARTIALP	150	266	56.39	100.00	150	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NA	NA	KB905472.1	1361102	1361554
GCA_000382445.1	GCA_000382445.1_01157	blaOXA	OXA-1327 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	285	285	100.00	82.46	285	WP_077564355.1	OXA-1327 family class D beta-lactamase	NF047782.1	OXA-1327 family class D beta-lactamase	KB905472.1	1361762	1362619
GCA_000382445.1	GCA_000382445.1_01158	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	KB905472.1	1362797	1363660
GCA_000382445.1	GCA_000382445.1_01253	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	KB905472.1	1450737	1451696
GCA_000382445.1	GCA_000382445.1_03156	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	KB905473.1	494206	495171
GCA_000382445.1	GCA_000382445.1_03603	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.86	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	KB905474.1	357207	359132
GCA_015700175.1	GCA_015700175.1_00646	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JACSYV010000002.1	40743	42206
GCA_015700175.1	GCA_015700175.1_00647	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JACSYV010000002.1	42227	43444
GCA_000186425.1	GCA_000186425.1_01382	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	94	91	97.80	67.42	89	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	GL636062.1	1636274	1636558
GCA_003217445.1	GCA_003217445.1_00336	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	QJSN01000001.1	324812	326104
GCA_003217445.1	GCA_003217445.1_00337	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	QJSN01000001.1	326122	326514
GCA_003217445.1	GCA_003217445.1_02369	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	131	97.71	92.19	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	QJSN01000023.1	2193	2618
GCA_003217445.1	GCA_003217445.1_02411	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	QJSN01000025.1	1041	1601
GCA_003217445.1	GCA_003217445.1_02412	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	QJSN01000025.1	1785	3329
GCA_003217445.1	GCA_003217445.1_02499	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	QJSN01000034.1	2052	2897
GCA_003217445.1	GCA_003217445.1_02500	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	QJSN01000034.1	3004	4761
GCA_003217445.1	GCA_003217445.1_02501	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	QJSN01000034.1	4751	5131
GCA_030232565.1	GCA_030232565.1_00085	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJN010000011.1	28956	29810
GCA_009496725.1	GCA_009496725.1_01645	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIIS01000006.1	109469	110668
GCA_022346225.1	GCA_022346225.1_01735	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRMP010000005.1	102049	103473
GCA_000525815.1	GCA_000525815.1_00153	inlL	class 1 internalin InlL	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	626	626	100.00	100.00	626	CDG45949.1	class 1 internalin InlL	NA	NA	AODC01000001.1	135849	137729
GCA_000525815.1	GCA_000525815.1_00501	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	77	133	57.89	92.21	77	WP_003726635.1	fosfomycin resistance hydrolase FosX	NA	NA	AODC01000002.1	81484	81717
GCA_000525815.1	GCA_000525815.1_00611	ami	autolysin Ami	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	917	917	100.00	99.56	917	ASH48222.1	autolysin Ami	NA	NA	AODC01000004.1	35075	37828
GCA_000525815.1	GCA_000525815.1_00689	inl-lmo0610	lmo0610 family class 1 internalin Inl-lmo0610	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	376	589	63.16	99.19	372	AEO24908.1	lmo0610 family class 1 internalin Inl-lmo0610	NA	NA	AODC01000005.1	67120	68250
GCA_000525815.1	GCA_000525815.1_01443	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	598	598	100.00	99.33	598	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK	AODC01000007.1	266653	268449
GCA_000525815.1	GCA_000525815.1_02074	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	98.28	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein	AODC01000010.1	202150	203721
GCA_000525815.1	GCA_000525815.1_02143	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1778	1778	100.00	99.66	1778	AEO24631.1	class 1 internalin InlI	NA	NA	AODC01000011.1	18988	24324
GCA_000525815.1	GCA_000525815.1_02226	inlF	class 1 internalin InlF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	799	821	97.32	99.62	799	AEO24707.1	class 1 internalin InlF	NA	NA	AODC01000011.1	88021	90420
GCA_000525815.1	GCA_000525815.1_02250	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	792	821	97.81	36.67	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA	AODC01000011.1	112904	115282
GCA_000525815.1	GCA_000525815.1_02252	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	482	630	76.51	99.59	482	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA	AODC01000011.1	115812	117260
GCA_000525815.1	GCA_000525815.1_02254	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	95.12	205	AEO24735.1	nuclear targeted protein LntA	NA	NA	AODC01000011.1	118934	119551
GCA_000525815.1	GCA_000525815.1_02265	gadD1	glutamate decarboxylase GadD1	plus	STRESS	ACID	NA	NA	BLASTP	462	462	100.00	99.78	462	CAC98526.1	glutamate decarboxylase GadD1	NA	NA	AODC01000011.1	131187	132575
GCA_000525815.1	GCA_000525815.1_02335	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	417	605	66.94	98.05	411	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA	AODC01000011.1	187371	188624
GCA_000525815.1	GCA_000525815.1_02918	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	383	388	98.71	99.74	383	AEO26812.1	class 3 internalin InlP	NA	NA	AODC01000017.1	77933	79084
GCA_000525815.1	GCA_000525815.1_03009	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	296	95.61	100.00	283	AHJ03495.1	class 3 internalin InlC	NA	NA	AODC01000018.1	9440	10291
GCA_000525815.1	GCA_000525815.1_03115	inlG	class 1 internalin InlG	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	490	490	100.00	100.00	490	AEO05269.1	class 1 internalin InlG	NA	NA	AODC01000021.1	31890	33362
GCA_000525815.1	GCA_000525815.1_03116	inlC	class 1 internalin InlC2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	548	548	100.00	100.00	548	AAB67969.1	class 1 internalin InlC2	NA	NA	AODC01000021.1	33499	35145
GCA_000525815.1	GCA_000525815.1_03118	inlD	class 1 internalin InlD	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	347	567	61.20	99.71	347	AAB67970.1	class 1 internalin InlD	NA	NA	AODC01000021.1	36014	37057
GCA_000525815.1	GCA_000525815.1_03119	inlE	class 1 internalin InlE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	499	499	100.00	99.40	499	CAA07458.1	class 1 internalin InlE	NA	NA	AODC01000021.1	37266	38765
GCA_000463445.1	GCA_000463445.1_01336	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP003840.1	1275551	1277470
GCA_963395025.1	GCA_963395025.1_00672	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJPV010000005.1	103549	104454
GCA_963395025.1	GCA_963395025.1_01096	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPV010000011.1	15145	16671
GCA_963395025.1	GCA_963395025.1_01467	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.39	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPV010000018.1	18161	19399
GCA_963395025.1	GCA_963395025.1_01468	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJPV010000018.1	19646	20278
GCA_019391775.1	GCA_019391775.1_02094	cfxA4	extended-spectrum class A beta-lactamase CfxA4	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	392	321	93.15	100.00	299	WP_057280848.1	extended-spectrum class A beta-lactamase CfxA4	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXQZ010000004.1	119434	120612
GCA_024104825.1	GCA_024104825.1_00155	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTP010000013.1	23936	24346
GCA_017655945.1	GCA_017655945.1_00514	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040409.1	512199	512573
GCA_029623695.1	GCA_029623695.1_00821	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP121103.1	760505	761899
GCA_029623695.1	GCA_029623695.1_01133	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP121103.1	1090992	1092209
GCA_029623695.1	GCA_029623695.1_01134	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP121103.1	1092329	1093792
GCA_029623695.1	GCA_029623695.1_01150	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP121103.1	1102853	1103713
GCA_019375575.1	GCA_019375575.1_00270	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCE010000014.1	9702	11627
GCA_019375575.1	GCA_019375575.1_01424	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCE010000032.1	612	1577
GCA_019375575.1	GCA_019375575.1_01550	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	395	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCE010000003.1	93456	94643
GCA_902509485.1	GCA_902509485.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LR735421.1	37726	39732
GCA_902509485.1	GCA_902509485.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	LR735421.1	39832	40818
GCA_902509485.1	GCA_902509485.1_00103	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR735421.1	110679	111968
GCA_902509485.1	GCA_902509485.1_00106	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LR735421.1	114146	114493
GCA_902509485.1	GCA_902509485.1_00169	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	LR735421.1	183371	183799
GCA_902509485.1	GCA_902509485.1_00272	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LR735421.1	309904	310749
GCA_902509485.1	GCA_902509485.1_00273	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LR735421.1	310856	312613
GCA_902509485.1	GCA_902509485.1_00274	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LR735421.1	312603	312983
GCA_902509485.1	GCA_902509485.1_01508	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	LR735421.1	1558366	1559805
GCA_902509485.1	GCA_902509485.1_02193	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR735421.1	2242548	2243840
GCA_902509485.1	GCA_902509485.1_02448	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	LR735422.1	21748	22233
GCA_902509485.1	GCA_902509485.1_02468	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	LR735422.1	37816	39255
GCA_902509485.1	GCA_902509485.1_02475	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LR735422.1	44607	45452
GCA_902509485.1	GCA_902509485.1_02476	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LR735422.1	45559	47316
GCA_902509485.1	GCA_902509485.1_02477	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LR735422.1	47306	47686
GCA_902509485.1	GCA_902509485.1_02497	catA	type A-7 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	215	215	100.00	98.60	215	WP_002489529.1	type A-7 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	LR735423.1	1075	1722
GCA_008180045.1	GCA_008180045.1_00117	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.16	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VSZJ01000001.1	132174	133955
GCA_008180045.1	GCA_008180045.1_00142	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VSZJ01000001.1	159553	160728
GCA_008180045.1	GCA_008180045.1_00143	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	209	278	75.18	99.52	209	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	VSZJ01000001.1	160932	161561
GCA_008180045.1	GCA_008180045.1_00144	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	VSZJ01000001.1	161768	162187
GCA_008180045.1	GCA_008180045.1_00147	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	VSZJ01000001.1	164225	165040
GCA_008180045.1	GCA_008180045.1_00181	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.30	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VSZJ01000001.1	208105	208959
GCA_008180045.1	GCA_008180045.1_01112	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VSZJ01000001.1	1225278	1226699
GCA_000214495.2	GCA_000214495.2_00530	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	AFIJ01000033.1	80748	81788
GCA_900240155.1	GCA_900240155.1_01801	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LT963438.1	1750729	1751109
GCA_900240155.1	GCA_900240155.1_01802	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LT963438.1	1751099	1752856
GCA_900240155.1	GCA_900240155.1_01803	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LT963438.1	1752963	1753808
GCA_900240155.1	GCA_900240155.1_02003	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LT963438.1	1963073	1963420
GCA_900240155.1	GCA_900240155.1_02006	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LT963438.1	1965588	1966877
GCA_900240155.1	GCA_900240155.1_02298	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	99.07	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	LT963438.1	2231278	2231601
GCA_015274025.1	GCA_015274025.1_01497	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACGQA010000006.1	4131	5204
GCA_015274025.1	GCA_015274025.1_01608	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGQA010000006.1	146812	148101
GCA_015274025.1	GCA_015274025.1_01609	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACGQA010000006.1	148119	148520
GCA_015274025.1	GCA_015274025.1_01882	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGQA010000008.1	77431	78720
GCA_015274025.1	GCA_015274025.1_02565	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGQA010000018.1	7588	8433
GCA_015274025.1	GCA_015274025.1_02566	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGQA010000018.1	8540	10297
GCA_015274025.1	GCA_015274025.1_02567	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGQA010000018.1	10287	10667
GCA_015274025.1	GCA_015274025.1_02570	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACGQA010000018.1	12458	13018
GCA_015274025.1	GCA_015274025.1_02571	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACGQA010000018.1	13202	14746
GCA_015274025.1	GCA_015274025.1_02575	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JACGQA010000019.1	383	1369
GCA_015274025.1	GCA_015274025.1_02576	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACGQA010000019.1	1469	3475
GCA_015274025.1	GCA_015274025.1_02609	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACGQA010000026.1	660	1394
GCA_015274025.1	GCA_015274025.1_02614	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JACGQA010000028.1	400	1839
GCA_015274025.1	GCA_015274025.1_02615	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGQA010000029.1	136	621
GCA_023109335.1	GCA_023109335.1_01800	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDUH010000007.1	25214	26677
GCA_023109335.1	GCA_023109335.1_01801	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDUH010000007.1	26797	28014
GCA_013333705.2	GCA_013333705.2_00264	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	123	82.93	44.12	102	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JABCOI020000020.1	4412	4738
GCA_003425525.1	GCA_003425525.1_01670	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031686.1	1646088	1647482
GCA_005888265.1	GCA_005888265.1_00445	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LNKS01000014.1	22441	23835
GCA_000210995.1	GCA_000210995.1_02112	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	FQ312045.1	1985483	1986682
GCA_022318505.1	GCA_022318505.1_00877	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP090887.1	846115	847314
GCA_022318505.1	GCA_022318505.1_01079	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP090887.1	1044513	1045250
GCA_022318505.1	GCA_022318505.1_01090	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_063856403.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP090887.1	1055174	1057093
GCA_022318505.1	GCA_022318505.1_01113	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP090887.1	1077931	1078581
GCA_020554325.1	GCA_020554325.1_01581	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAJCHD010000004.1	182461	183678
GCA_020554325.1	GCA_020554325.1_01582	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAJCHD010000004.1	183798	185261
GCA_001574405.1	GCA_001574405.1_00675	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	KQ965644.1	1833	3758
GCA_001574405.1	GCA_001574405.1_01956	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	123	82.93	43.14	102	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KQ965714.1	10890	11216
GCA_001574405.1	GCA_001574405.1_02281	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	KQ965729.1	54930	55895
GCA_000613925.1	GCA_000613925.1_01854	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	BAJX01000004.1	143682	144872
GCA_000613925.1	GCA_000613925.1_02098	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	BAJX01000003.1	211030	211995
GCA_001588875.1	GCA_001588875.1_01009	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	247	263	93.92	99.60	247	WP_001206316.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	LAWE01000018.1	2	745
GCA_009189185.2	GCA_009189185.2_00050	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP045137.2	42857	43600
GCA_009189185.2	GCA_009189185.2_00066	lsa(B)	ABC-F type ribosomal protection protein Lsa(B)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_011133547.1	ABC-F type ribosomal protection protein Lsa(B)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP045137.2	57267	58745
GCA_009189185.2	GCA_009189185.2_00067	cfr	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	core	AMR	AMR	LINCOSAMIDE/OXAZOLIDINONE/PHENICOL/PLEUROMUTILIN/STREPTOGRAMIN	CHLORAMPHENICOL/CLINDAMYCIN/FLORFENICOL/LINEZOLID/STREPTOGRAMIN B/TIAMULIN/VIRGINIAMYCIN	BLASTP	349	349	100.00	99.71	349	WP_001010505.1	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	CP045137.2	59391	60440
GCA_009189185.2	GCA_009189185.2_00077	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	965	1024	93.85	99.69	962	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP045137.2	67875	70772
GCA_009189185.2	GCA_009189185.2_00149	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP045137.2	114416	115705
GCA_009189185.2	GCA_009189185.2_00152	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP045137.2	117002	119008
GCA_009189185.2	GCA_009189185.2_00173	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP045137.2	134784	135185
GCA_009189185.2	GCA_009189185.2_00174	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.17	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP045137.2	135203	136495
GCA_009189185.2	GCA_009189185.2_00258	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP045137.2	211456	212748
GCA_009189185.2	GCA_009189185.2_01812	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP045137.2	1674547	1675044
GCA_009189185.2	GCA_009189185.2_01886	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP045137.2	1727518	1728957
GCA_009189185.2	GCA_009189185.2_02295	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	BLASTP	213	213	100.00	99.06	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP045137.2	2123576	2124217
GCA_009189185.2	GCA_009189185.2_02875	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP045137.2	2630559	2631404
GCA_009189185.2	GCA_009189185.2_02876	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP045137.2	2631511	2633268
GCA_009189185.2	GCA_009189185.2_02877	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP045137.2	2633258	2633638
GCA_009189185.2	GCA_009189185.2_02885	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP045137.2	2641191	2641985
GCA_009189185.2	GCA_009189185.2_02886	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP045137.2	2642078	2642620
GCA_009189185.2	GCA_009189185.2_02887	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	199	302	65.89	99.50	199	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	NA	CP045137.2	2642617	2643216
GCA_009189185.2	GCA_009189185.2_02892	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	CP045137.2	2646244	2646567
GCA_001688765.2	GCA_001688765.2_01564	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	303	88.45	40.30	268	WP_041881964.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP015409.2	1863121	1864005
GCA_009495735.1	GCA_009495735.1_01481	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJU01000005.1	109469	110668
GCA_002578695.1	GCA_002578695.1_01605	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NBIO01000013.1	25869	26279
GCA_900100745.1	GCA_900100745.1_00651	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	FMTZ01000005.1	16325	18106
GCA_900100745.1	GCA_900100745.1_01669	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	FMTZ01000017.1	227291	228466
GCA_900100745.1	GCA_900100745.1_01671	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	209	278	75.18	99.52	209	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	FMTZ01000017.1	228670	229299
GCA_900100745.1	GCA_900100745.1_01672	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	FMTZ01000017.1	229506	229925
GCA_900100745.1	GCA_900100745.1_01818	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.18	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	FMTZ01000014.1	83851	84705
GCA_900100745.1	GCA_900100745.1_01824	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FMTZ01000014.1	89691	91112
GCA_003043925.1	GCA_003043925.1_02339	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	PYXD01000002.1	405565	407490
GCA_001598595.1	GCA_001598595.1_00196	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	BCZG01000001.1	211157	211444
GCA_001598595.1	GCA_001598595.1_00197	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BCZG01000001.1	211455	213143
GCA_001598595.1	GCA_001598595.1_01560	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	261	266	97.74	42.15	261	WP_004861468.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	BCZG01000005.1	72615	73400
GCA_001598595.1	GCA_001598595.1_02101	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	BCZG01000007.1	90178	90414
GCA_001598595.1	GCA_001598595.1_02102	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	BCZG01000007.1	90411	90776
GCA_001598595.1	GCA_001598595.1_02103	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BCZG01000007.1	90794	92479
GCA_001598595.1	GCA_001598595.1_02104	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	BCZG01000007.1	92551	92826
GCA_001598595.1	GCA_001598595.1_02105	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	BCZG01000007.1	92839	93189
GCA_001598595.1	GCA_001598595.1_02106	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	BCZG01000007.1	93261	93695
GCA_001598595.1	GCA_001598595.1_02128	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	120	99.17	59.66	119	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BCZG01000007.1	116687	117046
GCA_001598595.1	GCA_001598595.1_02621	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	398	399	96.49	61.04	385	WP_000804064.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	BCZG01000009.1	104750	105946
GCA_001598595.1	GCA_001598595.1_03023	catB	type B chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	210	98.10	81.55	206	WP_063843223.1	type B chloramphenicol O-acetyltransferase	NF000490.1	type B chloramphenicol O-acetyltransferase	BCZG01000011.1	77012	77662
GCA_001598595.1	GCA_001598595.1_03274	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	BCZG01000012.1	121558	122373
GCA_001598595.1	GCA_001598595.1_05339	blaELC	ELC family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	HMM	430	450	100.00	87.78	450	WP_232734851.1	ELC family class C beta-lactamase	NF050047.1	ELC family class C beta-lactamase	BCZG01000029.1	21360	22652
GCA_001598595.1	GCA_001598595.1_05605	blaOXA-114f	class D beta-lactamase OXA-114f	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	275	275	100.00	100.00	275	WP_024069684.1	class D beta-lactamase OXA-114f	NF033818.0	OXA-114 family class D beta-lactamase	BCZG01000032.1	24389	25216
GCA_024787725.1	GCA_024787725.1_00467	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUIE010000001.1	493925	495850
GCA_024787725.1	GCA_024787725.1_01960	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	300	96.00	75.09	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JANUIE010000001.1	2304489	2305379
GCA_024787725.1	GCA_024787725.1_02250	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.25	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JANUIE010000001.1	2607614	2608819
GCA_024787725.1	GCA_024787725.1_02251	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JANUIE010000001.1	2608844	2609356
GCA_024787725.1	GCA_024787725.1_02608	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUIE010000001.1	2992049	2993974
GCA_024787725.1	GCA_024787725.1_03241	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	232	443	52.14	96.10	231	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	JANUIE010000001.1	3630729	3631427
GCA_024787725.1	GCA_024787725.1_03613	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUIE010000001.1	3963907	3965832
GCA_025698165.1	GCA_025698165.1_00001	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	VTAB01000010.1	433	2352
GCA_025698165.1	GCA_025698165.1_01355	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	VTAB01000040.1	1150	1644
GCA_028583385.1	GCA_028583385.1_01536	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	JANYMJ010000004.1	108758	109699
GCA_030176315.1	GCA_030176315.1_00327	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUH010000015.1	807	1661
GCA_015602705.1	GCA_015602705.1_00014	blaOXA	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	289	276	100.00	96.01	276	WP_004728961.1	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-282	NF000436.2	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	CP059081.1	16551	17420
GCA_015602705.1	GCA_015602705.1_00922	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	97.23	76.42	386	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP059081.1	949152	950372
GCA_002861405.1	GCA_002861405.1_01481	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	PKHT01000004.1	43586	44440
GCA_900458385.1	GCA_900458385.1_00178	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	UHCW01000005.1	184451	185524
GCA_900458385.1	GCA_900458385.1_00951	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHCW01000005.1	942049	943338
GCA_017655765.1	GCA_017655765.1_01896	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	123	100.00	45.60	125	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040417.1	1903034	1903408
GCA_013305725.1	GCA_013305725.1_00996	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP047883.1	982363	983580
GCA_013305725.1	GCA_013305725.1_00997	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP047883.1	983700	985163
GCA_013305725.1	GCA_013305725.1_01024	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_063856112.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP047883.1	1005010	1006929
GCA_013305725.1	GCA_013305725.1_01291	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.49	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP047883.1	1282946	1284145
GCA_002966595.1	GCA_002966595.1_00138	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP020007.1	128993	129853
GCA_002966595.1	GCA_002966595.1_01373	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP020007.1	1369404	1370798
GCA_016406225.1	GCA_016406225.1_00063	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	CP066303.1	68145	68480
GCA_016406225.1	GCA_016406225.1_00064	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	547	547	100.00	99.82	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP066303.1	68538	70181
GCA_016406225.1	GCA_016406225.1_00065	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP066303.1	70263	70913
GCA_016406225.1	GCA_016406225.1_02145	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP066303.1	2172203	2173048
GCA_016406225.1	GCA_016406225.1_02146	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP066303.1	2173155	2174912
GCA_016406225.1	GCA_016406225.1_02147	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP066303.1	2174902	2175282
GCA_001220005.1	GCA_001220005.1_00739	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CTEO01000005.1	60338	61627
GCA_001220005.1	GCA_001220005.1_00767	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CTEO01000006.1	15027	16316
GCA_001220005.1	GCA_001220005.1_00768	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CTEO01000006.1	16334	16735
GCA_001220005.1	GCA_001220005.1_00815	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CTEO01000006.1	56628	58634
GCA_001220005.1	GCA_001220005.1_01142	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CTEO01000012.1	75730	76803
GCA_001220005.1	GCA_001220005.1_01414	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CTEO01000016.1	24265	24906
GCA_001220005.1	GCA_001220005.1_01685	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CTEO01000026.1	401	1840
GCA_015668835.1	GCA_015668835.1_00503	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JADPGS010000001.1	572273	572785
GCA_015668835.1	GCA_015668835.1_00504	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JADPGS010000001.1	572810	574015
GCA_015668835.1	GCA_015668835.1_02704	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	292	304	97.04	39.39	297	WP_064964607.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JADPGS010000007.1	16557	17435
GCA_015262505.1	GCA_015262505.1_01581	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	98.65	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZSR010000004.1	95905	97095
GCA_009663495.1	GCA_009663495.1_00038	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	WHVU01000010.1	8360	8977
GCA_009663495.1	GCA_009663495.1_01645	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	WHVU01000002.1	572337	573410
GCA_009663495.1	GCA_009663495.1_01666	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	504	514	98.05	99.01	504	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	WHVU01000002.1	597277	598791
GCA_009663495.1	GCA_009663495.1_01667	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.39	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	WHVU01000002.1	599005	599565
GCA_009663495.1	GCA_009663495.1_02012	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	WHVU01000004.1	36279	36701
GCA_009663495.1	GCA_009663495.1_02070	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	WHVU01000004.1	100582	100929
GCA_009663495.1	GCA_009663495.1_02074	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	WHVU01000004.1	103095	104384
GCA_009663495.1	GCA_009663495.1_02317	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	WHVU01000005.1	60509	61798
GCA_009663495.1	GCA_009663495.1_02337	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	WHVU01000005.1	82989	83630
GCA_009717765.1	GCA_009717765.1_00055	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.01	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMZE01000001.1	56773	58509
GCA_009717765.1	GCA_009717765.1_00056	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMZE01000001.1	58511	60235
GCA_009717765.1	GCA_009717765.1_01056	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMZE01000002.1	479672	480100
GCA_011604725.1	GCA_011604725.1_00029	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	96.45	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP050067.1	28495	29679
GCA_011604725.1	GCA_011604725.1_00799	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	724	724	100.00	100.00	724	AEG95593.1	siderophore salmochelin receptor IroN	NA	NA	CP050067.1	770907	773081
GCA_011604725.1	GCA_011604725.1_00802	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1222	1219	100.00	84.38	1223	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP050067.1	775494	779162
GCA_011604725.1	GCA_011604725.1_00803	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.49	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP050067.1	779209	780324
GCA_011604725.1	GCA_011604725.1_02843	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	97.62	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP050067.1	2840225	2843377
GCA_011604725.1	GCA_011604725.1_03202	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	97.80	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP050067.1	3199238	3200470
GCA_011604725.1	GCA_011604725.1_03743	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	AAB09624.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP050067.1	3730340	3730693
GCA_011604725.1	GCA_011604725.1_03744	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	98.33	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP050067.1	3730741	3731103
GCA_011604725.1	GCA_011604725.1_03745	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	99.14	583	AAB09626.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP050067.1	3731121	3732872
GCA_011604725.1	GCA_011604725.1_03746	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.14	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP050067.1	3732921	3734210
GCA_011604725.1	GCA_011604725.1_03747	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	97.87	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP050067.1	3734223	3734648
GCA_011604725.1	GCA_011604725.1_04179	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	95.68	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP050067.1	4182630	4183049
GCA_011604725.1	GCA_011604725.1_04622	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	298	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP050067.1	4634012	4634908
GCA_011604725.1	GCA_011604725.1_04825	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP050069.1	6998	7834
GCA_011604725.1	GCA_011604725.1_04826	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP050069.1	7834	8253
GCA_011604725.1	GCA_011604725.1_04832	mph(A)	Mph(A) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	301	301	100.00	100.00	301	WP_000219391.1	Mph(A) family macrolide 2-phosphotransferase	NF000254.1	Mph(A) family macrolide 2-phosphotransferase	CP050069.1	14871	15776
GCA_011604725.1	GCA_011604725.1_04840	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP050069.1	22414	23253
GCA_011604725.1	GCA_011604725.1_04841	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP050069.1	23247	23594
GCA_011604725.1	GCA_011604725.1_04842	catB2	type B-2 chloramphenicol O-acetyltransferase CatB2	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	210	210	100.00	100.00	210	WP_012477387.1	type B-2 chloramphenicol O-acetyltransferase CatB2	NF000490.1	type B chloramphenicol O-acetyltransferase	CP050069.1	23763	24395
GCA_011604725.1	GCA_011604725.1_04843	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206317.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	CP050069.1	24448	25227
GCA_011604725.1	GCA_011604725.1_04845	aac(6)-Ib	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	208	184	100.00	99.46	184	WP_003159191.1	aminoglycoside N-acetyltransferase AAC(6)-Ib4	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP050069.1	26221	26847
GCA_011604725.1	GCA_011604725.1_04846	blaVIM-1	subclass B1 metallo-beta-lactamase VIM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	266	266	100.00	100.00	266	WP_013263789.1	subclass B1 metallo-beta-lactamase VIM-1	NF012100.0	VIM family subclass B1 metallo-beta-lactamase	CP050069.1	26883	27683
GCA_011604725.1	GCA_011604725.1_04860	qnrS1	quinolone resistance pentapeptide repeat protein QnrS1	core	AMR	AMR	QUINOLONE	QUINOLONE	ALLELEP	218	218	100.00	100.00	218	WP_001516695.1	quinolone resistance pentapeptide repeat protein QnrS1	NF000056.3	QnrS family quinolone resistance pentapeptide repeat protein	CP050069.1	36570	37226
GCA_011604725.1	GCA_011604725.1_04865	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP050069.1	39972	40811
GCA_011604725.1	GCA_011604725.1_04866	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP050069.1	40805	41152
GCA_011604725.1	GCA_011604725.1_04867	dfrA16	trimethoprim-resistant dihydrofolate reductase DfrA16	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	PARTIALP	83	157	52.87	100.00	83	WP_032490158.1	trimethoprim-resistant dihydrofolate reductase DfrA16	NA	NA	CP050069.1	41356	41607
GCA_011604725.1	GCA_011604725.1_05151	terB	tellurium resistance membrane protein TerB	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	151	151	100.00	93.38	151	ACI12150.1	tellurium resistance membrane protein TerB	NA	NA	CP050068.1	206519	206974
GCA_011604725.1	GCA_011604725.1_05152	terC	tellurium resistance membrane protein TerC	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	346	346	100.00	95.09	346	AAA98291.1	tellurium resistance membrane protein TerC	NA	NA	CP050068.1	206998	208038
GCA_011604725.1	GCA_011604725.1_05153	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	94.79	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP050068.1	208089	208667
GCA_011604725.1	GCA_011604725.1_05185	terB	tellurium resistance membrane protein TerB	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	151	151	100.00	100.00	151	ACI12150.1	tellurium resistance membrane protein TerB	NA	NA	CP050068.1	245052	245507
GCA_011604725.1	GCA_011604725.1_05186	terC	tellurium resistance membrane protein TerC	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	346	346	100.00	99.13	346	AAA98291.1	tellurium resistance membrane protein TerC	NA	NA	CP050068.1	245531	246571
GCA_011604725.1	GCA_011604725.1_05187	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	98.96	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP050068.1	246610	247188
GCA_011604725.1	GCA_011604725.1_05188	terE	tellurium resistance cAMP binding protein TerE	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	191	191	100.00	99.48	191	AAA98293.1	tellurium resistance cAMP binding protein TerE	NA	NA	CP050068.1	247275	247850
GCA_001073285.1	GCA_001073285.1_02259	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JVCN01000030.1	63199	65118
GCA_001073285.1	GCA_001073285.1_02260	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JVCN01000030.1	66227	66964
GCA_001073285.1	GCA_001073285.1_02361	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JVCN01000001.1	22653	23081
GCA_905372475.1	GCA_905372475.1_01836	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	381	70.60	45.35	269	WP_009950391.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAJPPP010000041.1	5942	6790
GCA_002096135.1	GCA_002096135.1_00121	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP020763.1	130034	131326
GCA_002096135.1	GCA_002096135.1_01954	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP020763.1	1964922	1965341
GCA_002096135.1	GCA_002096135.1_02459	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP020763.1	2475953	2477026
GCA_008728755.1	GCA_008728755.1_01905	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP041725.1	1912326	1912745
GCA_008728755.1	GCA_008728755.1_02457	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP041725.1	2464012	2465085
GCA_008728755.1	GCA_008728755.1_02610	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP041725.1	2624749	2626041
GCA_000148525.2	GCA_000148525.2_01398	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AEDU01000008.1	82096	83559
GCA_000148525.2	GCA_000148525.2_01399	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	260	405	64.20	99.23	260	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NA	NA	AEDU01000008.1	83679	84461
GCA_000148525.2	GCA_000148525.2_01406	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	58.91	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AEDU01000008.1	91273	91701
GCA_000148525.2	GCA_000148525.2_01605	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AEDU01000007.1	87755	88954
GCA_000368045.1	GCA_000368045.1_00677	aph(3)-IIa	aminoglycoside O-phosphotransferase APH(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_000572405.1	aminoglycoside O-phosphotransferase APH(3)-IIa	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	KB849231.1	269	1063
GCA_000368045.1	GCA_000368045.1_01660	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	96.98	76.36	385	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	KB849235.1	466698	467918
GCA_000368045.1	GCA_000368045.1_03407	blaOXA-281	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-281	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_004697403.1	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-281	NF000417.2	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	KB849237.1	10444	11268
GCA_000412775.1	GCA_000412775.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP006044.1	40183	40581
GCA_000412775.1	GCA_000412775.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	99.60	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP006044.1	40804	41547
GCA_000412775.1	GCA_000412775.1_00040	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP006044.1	44020	46026
GCA_000412775.1	GCA_000412775.1_00041	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP006044.1	46126	47883
GCA_000412775.1	GCA_000412775.1_00042	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP006044.1	47883	48254
GCA_000412775.1	GCA_000412775.1_00051	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP006044.1	54991	55722
GCA_000412775.1	GCA_000412775.1_00052	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP006044.1	55848	56630
GCA_000412775.1	GCA_000412775.1_00153	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP006044.1	164363	165721
GCA_000412775.1	GCA_000412775.1_00351	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP006044.1	389875	391230
GCA_000412775.1	GCA_000412775.1_01631	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.40	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP006044.1	1681711	1682463
GCA_000412775.1	GCA_000412775.1_01684	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP006044.1	1734819	1735550
GCA_000412775.1	GCA_000412775.1_01685	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP006044.1	1735676	1736458
GCA_000412775.1	GCA_000412775.1_01804	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.65	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP006044.1	1878581	1879873
GCA_000412775.1	GCA_000412775.1_01849	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	256	261	100.00	93.87	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP006044.1	1912536	1913306
GCA_000412775.1	GCA_000412775.1_01850	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.39	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP006044.1	1913460	1914188
GCA_000412775.1	GCA_000412775.1_01851	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP006044.1	1914223	1914942
GCA_000412775.1	GCA_000412775.1_01852	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	99.61	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP006044.1	1915223	1915987
GCA_000412775.1	GCA_000412775.1_02071	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP006044.1	2082265	2082615
GCA_000412775.1	GCA_000412775.1_02076	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP006044.1	2084828	2085319
GCA_000412775.1	GCA_000412775.1_02149	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP006044.1	2138492	2138626
GCA_000412775.1	GCA_000412775.1_02294	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	96.25	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP006044.1	2286815	2288257
GCA_000412775.1	GCA_000412775.1_02557	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP006044.1	2530175	2531140
GCA_000412775.1	GCA_000412775.1_02558	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP006044.1	2531708	2532655
GCA_000412775.1	GCA_000412775.1_02559	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	99.38	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP006044.1	2532657	2533634
GCA_000412775.1	GCA_000412775.1_02778	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	299	509	58.15	90.54	296	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP006044.1	2762597	2763496
GCA_000412775.1	GCA_000412775.1_02813	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP006044.1	2810360	2811412
GCA_000412775.1	GCA_000412775.1_02858	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP006045.1	4500	5117
GCA_000412775.1	GCA_000412775.1_02863	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733287.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP006045.1	7944	8789
GCA_000412775.1	GCA_000412775.1_02864	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP006045.1	8896	10653
GCA_000412775.1	GCA_000412775.1_02865	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP006045.1	10643	11023
GCA_000412775.1	GCA_000412775.1_02869	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP006045.1	14106	14420
GCA_000412775.1	GCA_000412775.1_02870	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.77	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP006045.1	14420	15709
GCA_000412775.1	GCA_000412775.1_02871	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP006045.1	15727	16122
GCA_027666825.1	GCA_027666825.1_00954	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	JAQEHA010000002.1	116368	116862
GCA_021367115.1	GCA_021367115.1_00428	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.72	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCPC010000002.1	46475	47767
GCA_021367115.1	GCA_021367115.1_01754	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAHCPC010000009.1	36307	36621
GCA_021367115.1	GCA_021367115.1_01755	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.90	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCPC010000009.1	36621	37910
GCA_021367115.1	GCA_021367115.1_01756	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHCPC010000009.1	37928	38323
GCA_021367115.1	GCA_021367115.1_01976	fusC	FusC family fusidic acid resistance EF-G-binding protein	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	BLASTP	212	212	100.00	99.06	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	JAHCPC010000011.1	18716	19354
GCA_021367115.1	GCA_021367115.1_01982	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	115	131	84.73	91.89	111	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHCPC010000011.1	25123	25470
GCA_021367115.1	GCA_021367115.1_02022	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCPC010000011.1	59374	60663
GCA_021367115.1	GCA_021367115.1_02026	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHCPC010000011.1	62829	63176
GCA_021367115.1	GCA_021367115.1_02594	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_000700648.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAHCPC010000022.1	2180	2665
GCA_000209465.1	GCA_000209465.1_00280	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	77.64	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	GL890583.1	315889	317367
GCA_000209465.1	GCA_000209465.1_02902	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	GL890606.1	15475	17394
GCA_020702545.2	GCA_020702545.2_00038	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.67	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP099499.1	36712	38067
GCA_020702545.2	GCA_020702545.2_01234	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	279	250	100.00	96.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP099499.1	1274801	1275640
GCA_020702545.2	GCA_020702545.2_01400	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP099499.1	1465483	1466775
GCA_020702545.2	GCA_020702545.2_01583	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP099499.1	1610442	1610822
GCA_020702545.2	GCA_020702545.2_01584	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP099499.1	1610812	1612569
GCA_020702545.2	GCA_020702545.2_01585	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP099499.1	1612676	1613521
GCA_020702545.2	GCA_020702545.2_01620	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP099499.1	1648017	1648151
GCA_020702545.2	GCA_020702545.2_01783	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP099499.1	1811974	1813416
GCA_020702545.2	GCA_020702545.2_02041	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP099499.1	2051101	2052066
GCA_020702545.2	GCA_020702545.2_02042	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP099499.1	2052634	2053581
GCA_020702545.2	GCA_020702545.2_02043	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP099499.1	2053583	2054560
GCA_020702545.2	GCA_020702545.2_02258	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP099499.1	2283489	2285018
GCA_020702545.2	GCA_020702545.2_02296	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	98.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP099499.1	2331819	2332871
GCA_020702545.2	GCA_020702545.2_02316	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.72	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP099499.1	2350853	2354404
GCA_020702545.2	GCA_020702545.2_02371	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP099499.1	2411215	2413221
GCA_020702545.2	GCA_020702545.2_02380	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP099499.1	2419292	2419693
GCA_020702545.2	GCA_020702545.2_02381	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP099499.1	2419711	2421000
GCA_020702545.2	GCA_020702545.2_02472	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP099499.1	2520068	2521426
GCA_020702545.2	GCA_020702545.2_02609	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP099499.1	2686760	2688136
GCA_020702545.2	GCA_020702545.2_02615	dfrE	trimethoprim-resistant dihydrofolate reductase DfrE	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	164	164	100.00	100.00	164	WP_012655890.1	trimethoprim-resistant dihydrofolate reductase DfrE	NF040541.1	trimethoprim-resistant dihydrofolate reductase DfrE	CP099499.1	2693672	2694166
GCA_020702545.2	GCA_020702545.2_02622	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	491	491	100.00	100.00	491	WP_012655884.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP099499.1	2697464	2698939
GCA_020702545.2	GCA_020702545.2_02623	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP099499.1	2699520	2700257
GCA_020702545.2	GCA_020702545.2_02790	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_000700648.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CP099501.1	1594	2079
GCA_028327965.1	GCA_028327965.1_00173	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMNF010000013.1	4698	6617
GCA_028327965.1	GCA_028327965.1_01696	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMNF010000007.1	5401	6132
GCA_000154385.1	GCA_000154385.1_01039	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_033493020.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	DS483502.1	84403	86322
GCA_000147095.1	GCA_000147095.1_01146	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP002176.1	1061018	1061668
GCA_000147095.1	GCA_000147095.1_01164	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP002176.1	1074324	1076243
GCA_000147095.1	GCA_000147095.1_01175	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP002176.1	1086161	1086898
GCA_000147095.1	GCA_000147095.1_01284	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP002176.1	1200607	1201035
GCA_000147095.1	GCA_000147095.1_01360	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP002176.1	1267620	1268819
GCA_025150625.1	GCA_025150625.1_01719	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.85	41.31	472	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXTB010000034.1	1282	2676
GCA_009732795.1	GCA_009732795.1_00313	aac(3)-Ia	aminoglycoside N-acetyltransferase AAC(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	177	154	100.00	100.00	154	WP_022542381.1	aminoglycoside N-acetyltransferase AAC(3)-Ia	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP045868.1	299729	300262
GCA_009732795.1	GCA_009732795.1_00482	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	97.43	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP045868.1	478807	481959
GCA_009732795.1	GCA_009732795.1_00687	aac(3)-Ia	aminoglycoside N-acetyltransferase AAC(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	177	154	100.00	100.00	154	WP_022542381.1	aminoglycoside N-acetyltransferase AAC(3)-Ia	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP045868.1	685242	685775
GCA_009732795.1	GCA_009732795.1_00723	aac(3)-Ia	aminoglycoside N-acetyltransferase AAC(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	177	154	100.00	100.00	154	WP_022542381.1	aminoglycoside N-acetyltransferase AAC(3)-Ia	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP045868.1	718890	719423
GCA_009732795.1	GCA_009732795.1_00853	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	97.56	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP045868.1	879125	880357
GCA_009732795.1	GCA_009732795.1_01281	aac(3)-Ia	aminoglycoside N-acetyltransferase AAC(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	177	154	100.00	100.00	154	WP_022542381.1	aminoglycoside N-acetyltransferase AAC(3)-Ia	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP045868.1	1330695	1331228
GCA_009732795.1	GCA_009732795.1_01407	ampC-Kaer	AmpC-Kaer family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	386	381	100.00	98.43	381	WP_063406924.1	extended-spectrum class C beta-lactamase AmpC-Kaer-1	NF041662.1	AmpC-Kaer family extended-spectrum class C beta-lactamase	CP045868.1	1455914	1457074
GCA_009732795.1	GCA_009732795.1_01807	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	95.68	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP045868.1	1899096	1899515
GCA_009732795.1	GCA_009732795.1_02235	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	298	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP045868.1	2351907	2352803
GCA_009732795.1	GCA_009732795.1_02447	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	96.45	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP045868.1	2573809	2574993
GCA_009732795.1	GCA_009732795.1_02952	aac(3)-Ia	aminoglycoside N-acetyltransferase AAC(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	177	154	100.00	100.00	154	WP_022542381.1	aminoglycoside N-acetyltransferase AAC(3)-Ia	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP045868.1	3082140	3082673
GCA_009732795.1	GCA_009732795.1_03145	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	724	100.00	99.86	724	AEG95593.1	siderophore salmochelin receptor IroN	NA	NA	CP045868.1	3284979	3287153
GCA_009732795.1	GCA_009732795.1_03148	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1222	1219	100.00	84.38	1223	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP045868.1	3289566	3293234
GCA_009732795.1	GCA_009732795.1_03149	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.49	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP045868.1	3293281	3294396
GCA_009732795.1	GCA_009732795.1_03247	aac(3)-Ia	aminoglycoside N-acetyltransferase AAC(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	177	154	100.00	100.00	154	WP_022542381.1	aminoglycoside N-acetyltransferase AAC(3)-Ia	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP045868.1	3391458	3391991
GCA_009732795.1	GCA_009732795.1_03723	aac(3)-Ia	aminoglycoside N-acetyltransferase AAC(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	177	154	100.00	100.00	154	WP_022542381.1	aminoglycoside N-acetyltransferase AAC(3)-Ia	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP045868.1	3900218	3900751
GCA_009732795.1	GCA_009732795.1_03899	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	144	141	99.29	87.14	140	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP045868.1	4088872	4089306
GCA_009732795.1	GCA_009732795.1_04066	clbB	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	3206	3206	100.00	99.97	3206	AMQ58400.1	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	NA	NA	CP045868.1	4275254	4284874
GCA_009732795.1	GCA_009732795.1_04078	clbN	colibactin non-ribosomal peptide synthetase ClbN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1455	1455	100.00	100.00	1455	AMH08480.1	colibactin non-ribosomal peptide synthetase ClbN	NA	NA	CP045868.1	4314970	4319337
GCA_009732795.1	GCA_009732795.1_04112	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	570	600	95.00	99.82	570	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP045868.1	4367470	4369182
GCA_009732795.1	GCA_009732795.1_04113	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.50	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP045868.1	4369169	4370971
GCA_009732795.1	GCA_009732795.1_04332	aac(3)-Ia	aminoglycoside N-acetyltransferase AAC(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	177	154	100.00	100.00	154	WP_022542381.1	aminoglycoside N-acetyltransferase AAC(3)-Ia	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP045868.1	4568216	4568749
GCA_025560305.1	GCA_025560305.1_00635	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	274	264	94.70	53.10	258	WP_032490761.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP048532.1	625747	626571
GCA_025560305.1	GCA_025560305.1_02027	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	150	146	94.52	59.42	138	WP_049270433.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP048532.1	1989673	1990125
GCA_025560305.1	GCA_025560305.1_03006	catB1	type B-1 chloramphenicol O-acetyltransferase CatB1	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	211	209	99.04	94.69	207	WP_010974114.1	type B-1 chloramphenicol O-acetyltransferase CatB1	NF000490.1	type B chloramphenicol O-acetyltransferase	CP048533.1	30476	31111
GCA_025560305.1	GCA_025560305.1_04892	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	385	450	82.67	51.08	372	WP_232734851.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP048533.1	2097501	2098658
GCA_024330905.1	GCA_024330905.1_02136	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	99.18	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	JANDXC010000040.1	12772	13506
GCA_024330905.1	GCA_024330905.1_02486	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANDXC010000058.1	809	1774
GCA_002014955.1	GCA_002014955.1_00168	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	MUXR01000001.1	154012	155931
GCA_002014955.1	GCA_002014955.1_01285	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	MUXR01000034.1	10745	12166
GCA_020091545.1	GCA_020091545.1_00400	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	300	96.00	75.09	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP081920.1	550646	551536
GCA_020091545.1	GCA_020091545.1_01174	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	94.58	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP081920.1	1379438	1380769
GCA_017355005.1	GCA_017355005.1_00045	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP071508.1	50251	50643
GCA_017355005.1	GCA_017355005.1_00046	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	88.58	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP071508.1	50661	51950
GCA_017355005.1	GCA_017355005.1_00129	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP071508.1	122940	124232
GCA_017355005.1	GCA_017355005.1_00925	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP071508.1	867730	868371
GCA_017355005.1	GCA_017355005.1_02146	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP071508.1	2060781	2062421
GCA_017355005.1	GCA_017355005.1_02164	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP071508.1	2079956	2080516
GCA_017355005.1	GCA_017355005.1_02165	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP071508.1	2080700	2082244
GCA_017355005.1	GCA_017355005.1_02475	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP071509.1	34584	35144
GCA_017355005.1	GCA_017355005.1_02476	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP071509.1	35328	36872
GCA_000340685.1	GCA_000340685.1_02197	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CM001796.1	2381703	2382440
GCA_000340685.1	GCA_000340685.1_02198	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	EXACTP	266	266	100.00	100.00	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CM001796.1	2382676	2383476
GCA_001201015.1	GCA_001201015.1_00849	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CTEM01000007.1	54974	56980
GCA_001201015.1	GCA_001201015.1_01037	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CTEM01000010.1	27323	27724
GCA_001201015.1	GCA_001201015.1_01038	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CTEM01000010.1	27742	29031
GCA_001201015.1	GCA_001201015.1_01452	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CTEM01000016.1	11	856
GCA_001201015.1	GCA_001201015.1_01453	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CTEM01000016.1	963	2720
GCA_001201015.1	GCA_001201015.1_01454	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CTEM01000016.1	2710	3090
GCA_001201015.1	GCA_001201015.1_01457	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CTEM01000016.1	4890	6356
GCA_001201015.1	GCA_001201015.1_01496	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CTEM01000018.1	613	1992
GCA_001201015.1	GCA_001201015.1_01713	aph(2)-Ia	aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	HMM	265	479	55.32	99.62	265	WP_032490744.1	aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CTEM01000024.1	44	841
GCA_001201015.1	GCA_001201015.1_02044	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CTEM01000035.1	19231	20304
GCA_001201015.1	GCA_001201015.1_02325	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CTEM01000037.1	60343	61632
GCA_002165435.1	GCA_002165435.1_00673	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	NFUG01000002.1	115003	116382
GCA_002165435.1	GCA_002165435.1_00678	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NFUG01000002.1	119951	120796
GCA_002165435.1	GCA_002165435.1_00679	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	NFUG01000002.1	120903	122660
GCA_002165435.1	GCA_002165435.1_00680	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	NFUG01000002.1	122650	123030
GCA_002165435.1	GCA_002165435.1_00773	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NFUG01000002.1	217968	219974
GCA_002165435.1	GCA_002165435.1_00803	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	NFUG01000002.1	242762	243163
GCA_002165435.1	GCA_002165435.1_00804	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	NFUG01000002.1	243181	244470
GCA_002165435.1	GCA_002165435.1_00811	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	NFUG01000002.1	249669	250961
GCA_002165435.1	GCA_002165435.1_00815	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	44.63	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NFUG01000002.1	253126	253473
GCA_002165435.1	GCA_002165435.1_00929	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	NFUG01000002.1	363446	364738
GCA_024105095.1	GCA_024105095.1_00153	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDUD010000011.1	1763	2173
GCA_009496905.1	GCA_009496905.1_00639	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJB01000001.1	505281	506480
GCA_003578595.1	GCA_003578595.1_01974	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	QXRR01000005.1	22003	23076
GCA_003578595.1	GCA_003578595.1_02144	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	QXRR01000006.1	60566	61855
GCA_008728395.1	GCA_008728395.1_00349	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_063856409.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP043529.1	434774	436699
GCA_008728395.1	GCA_008728395.1_01236	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	43.69	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP043529.1	1569187	1569513
GCA_008728395.1	GCA_008728395.1_02196	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP043529.1	2591162	2592121
GCA_008728395.1	GCA_008728395.1_03509	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	CP043529.1	4028252	4028764
GCA_008728395.1	GCA_008728395.1_03510	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	CP043529.1	4028789	4029994
GCA_938018175.1	GCA_938018175.1_01460	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CALIIF010000018.1	19779	21419
GCA_012844205.1	GCA_012844205.1_02292	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JABAGP010000006.1	81602	83527
GCA_030516155.1	GCA_030516155.1_01706	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	94.37	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100379.1	1812383	1813237
GCA_022568955.1	GCA_022568955.1_00424	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKG010000002.1	115632	116924
GCA_022568955.1	GCA_022568955.1_01228	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKRKG010000008.1	23468	23848
GCA_022568955.1	GCA_022568955.1_01229	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKRKG010000008.1	23838	25595
GCA_022568955.1	GCA_022568955.1_01230	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKRKG010000008.1	25702	26547
GCA_022568955.1	GCA_022568955.1_01339	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKG010000009.1	49490	49909
GCA_022568955.1	GCA_022568955.1_02365	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKG010000025.1	4900	5973
GCA_022568955.1	GCA_022568955.1_02441	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	137	131	90.84	92.44	119	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKRKG010000028.1	10327	10740
GCA_027474945.1	GCA_027474945.1_01326	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	207	207	100.00	81.64	207	WP_002570989.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP101409.1	1354269	1354892
GCA_000960065.1	GCA_000960065.1_01207	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JYGS01000004.1	590178	591377
GCA_030229415.1	GCA_030229415.1_00132	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPHE010000013.1	693	1544
GCA_030229415.1	GCA_030229415.1_00141	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPHE010000013.1	9426	10280
GCA_030229415.1	GCA_030229415.1_00147	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	PARTIALP	341	391	87.21	100.00	341	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	JASPHE010000016.1	48	1073
GCA_022014575.1	GCA_022014575.1_00432	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JAHWRA010000010.1	772	1191
GCA_022014575.1	GCA_022014575.1_00433	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAHWRA010000010.1	1191	2027
GCA_022014575.1	GCA_022014575.1_00434	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAHWRA010000010.1	2231	3406
GCA_022014575.1	GCA_022014575.1_00447	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAHWRA010000010.1	10638	11492
GCA_022014575.1	GCA_022014575.1_01102	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAHWRA010000026.1	88	903
GCA_001813805.1	GCA_001813805.1_00314	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	457	458	98.47	98.67	451	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	KV813957.1	87604	88977
GCA_001813805.1	GCA_001813805.1_00315	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV813957.1	89075	90994
GCA_001813805.1	GCA_001813805.1_00763	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV813968.1	1525	3165
GCA_001813805.1	GCA_001813805.1_00896	dfrF	trimethoprim-resistant dihydrofolate reductase DfrF	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	164	164	100.00	100.00	164	WP_002322211.1	trimethoprim-resistant dihydrofolate reductase DfrF	NF000333.1	trimethoprim-resistant dihydrofolate reductase DfrF	KV813968.1	119750	120244
GCA_900458745.1	GCA_900458745.1_00057	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.62	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHDX01000002.1	52154	53443
GCA_900458745.1	GCA_900458745.1_00060	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UHDX01000002.1	55611	55958
GCA_900458745.1	GCA_900458745.1_02298	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	352	350	97.71	52.77	343	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	UHDX01000001.1	29785	30843
GCA_900478185.1	GCA_900478185.1_01642	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	LS483471.1	1627959	1628696
GCA_900478185.1	GCA_900478185.1_01653	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LS483471.1	1638614	1640533
GCA_900638565.1	GCA_900638565.1_00074	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LR134524.1	82822	84741
GCA_000181835.1	GCA_000181835.1_00057	lef	anthrax toxin lethal factor	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	809	809	100.00	100.00	809	AAM26117.1	anthrax toxin lethal factor	NA	NA	ABJC01000062.1	49987	52416
GCA_000181835.1	GCA_000181835.1_00062	pagA	anthrax toxin protective antigen	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	764	764	100.00	99.74	764	AAD32414.1	anthrax toxin protective antigen	NA	NA	ABJC01000062.1	55709	58003
GCA_000181835.1	GCA_000181835.1_00072	atxA	anthrax toxin expression trans-acting transcriptional regulator AtxA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	475	475	100.00	100.00	475	AAD32423.1	anthrax toxin expression trans-acting transcriptional regulator AtxA	NA	NA	ABJC01000062.1	72584	74011
GCA_000181835.1	GCA_000181835.1_00077	cya	anthrax toxin edema factor	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	800	800	100.00	99.88	800	AJG68144.1	anthrax toxin edema factor	NA	NA	ABJC01000062.1	76766	79168
GCA_000181835.1	GCA_000181835.1_00089	hasA	hyaluronan synthase HasA	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	366	427	85.71	99.73	366	KHA45933.1	hyaluronan synthase HasA	NA	NA	ABJC01000062.1	89252	90352
GCA_000181835.1	GCA_000181835.1_00194	capE	capsule biosynthesis protein CapE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	47	47	100.00	100.00	47	AAF13659.1	capsule biosynthesis protein CapE	NA	NA	ABJC01000063.1	11647	11790
GCA_000181835.1	GCA_000181835.1_00195	capD	capsule biosynthesis gamma-glutamyltransferase CapD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	528	528	100.00	100.00	528	AAM26219.1	capsule biosynthesis gamma-glutamyltransferase CapD	NA	NA	ABJC01000063.1	11805	13391
GCA_000181835.1	GCA_000181835.1_00196	capA	capsular polyglutamate synthetase CapA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	411	411	100.00	100.00	411	AAM26220.1	capsular polyglutamate synthetase CapA	NA	NA	ABJC01000063.1	13388	14623
GCA_000181835.1	GCA_000181835.1_00197	capC	capsular polyglutamate amide ligase/translocase CapC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	149	149	100.00	100.00	149	AAM26221.1	capsular polyglutamate amide ligase/translocase CapC	NA	NA	ABJC01000063.1	14635	15084
GCA_000181835.1	GCA_000181835.1_00198	capB	capsule biosynthesis protein CapB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	464	464	100.00	100.00	464	AAF13663.1	capsule biosynthesis protein CapB	NA	NA	ABJC01000063.1	15099	16493
GCA_000181835.1	GCA_000181835.1_00982	inhA2	M6 family metalloprotease immune inhibitor InhA2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	799	799	100.00	100.00	799	AAP24685.1	M6 family metalloprotease immune inhibitor InhA2	NA	NA	ABJC01000032.1	25860	28259
GCA_000181835.1	GCA_000181835.1_00987	cerA	phospholipase CerA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	283	100.00	98.59	283	AAS39677.1	phospholipase CerA	NA	NA	ABJC01000032.1	32124	32975
GCA_000181835.1	GCA_000181835.1_00988	sph	sphingomyelinase C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	333	338	98.52	99.70	333	AAP24691.1	sphingomyelinase C	NA	NA	ABJC01000032.1	33049	34050
GCA_000181835.1	GCA_000181835.1_01321	plcA	phosphatidylinositol diacylglycerol-lyase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	329	329	100.00	100.00	329	AAP27624.1	phosphatidylinositol diacylglycerol-lyase	NA	NA	ABJC01000026.1	26933	27922
GCA_000181835.1	GCA_000181835.1_01595	fosB2	fosfomycin resistance bacillithiol transferase FosB2	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_000938987.1	fosfomycin resistance bacillithiol transferase FosB2	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	ABJC01000022.1	33054	33473
GCA_000181835.1	GCA_000181835.1_02535	plcR	transcriptional regulator PlcR	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	213	285	74.74	98.12	213	AAT61178.1	transcriptional regulator PlcR	NA	NA	ABJC01000012.1	30825	31466
GCA_000181835.1	GCA_000181835.1_03398	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	219	98.63	57.87	216	WP_087344902.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	ABJC01000007.1	154533	155183
GCA_000181835.1	GCA_000181835.1_03452	inhA1	M6 family metalloprotease immune inhibitor InhA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	795	796	100.00	96.61	796	ADH05944.1	M6 family metalloprotease immune inhibitor InhA1	NA	NA	ABJC01000006.1	37970	40357
GCA_000181835.1	GCA_000181835.1_03640	entFM	enterotoxin EntFM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	420	421	100.00	98.81	421	AFH83235.1	enterotoxin EntFM	NF040678.1	enterotoxin EntFM	ABJC01000005.1	24943	26205
GCA_000181835.1	GCA_000181835.1_03728	fosB	FosBx1 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	138	100.00	89.13	138	WP_000943772.1	FosBx1 family fosfomycin resistance bacillithiol transferase	NF041541.1	FosBx1 family fosfomycin resistance bacillithiol transferase	ABJC01000005.1	103278	103694
GCA_000181835.1	GCA_000181835.1_04478	mphL	macrolide 2-phosphotransferase MphL	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	298	303	98.02	87.21	297	WP_002047670.1	macrolide 2-phosphotransferase MphL	NF038057.1	macrolide 2-phosphotransferase MphL	ABJC01000002.1	70025	70921
GCA_000181835.1	GCA_000181835.1_04778	nheA	non-hemolytic enterotoxin NHE subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	386	386	100.00	97.93	386	AAS40892.1	non-hemolytic enterotoxin NHE subunit A	NA	NA	ABJC01000002.1	345547	346707
GCA_000181835.1	GCA_000181835.1_04779	nheB	non-hemolytic enterotoxin NHE subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	402	402	100.00	98.51	402	AAS40893.1	non-hemolytic enterotoxin NHE subunit B	NA	NA	ABJC01000002.1	346739	347947
GCA_000181835.1	GCA_000181835.1_04859	bla	class A beta-lactamase Bla1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	306	309	99.03	99.67	306	WP_011053164.1	class A beta-lactamase Bla1	NF033096.1	class A beta-lactamase Bla1	ABJC01000001.2	69922	70842
GCA_000181835.1	GCA_000181835.1_04884	hlyII	hemolysin II HlyII	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	240	412	58.25	96.25	240	AAP10457.1	hemolysin II HlyII	NA	NA	ABJC01000001.2	94425	95147
GCA_000181835.1	GCA_000181835.1_04885	hlyIIR	hemolysin II regulator HlyIIR	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	201	201	100.00	99.50	201	AAO74585.1	hemolysin II regulator HlyIIR	NA	NA	ABJC01000001.2	95678	96283
GCA_000181835.1	GCA_000181835.1_04886	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	82.52	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	ABJC01000001.2	96425	97903
GCA_000181835.1	GCA_000181835.1_04987	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	210	210	98.10	66.67	207	WP_071218948.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	ABJC01000001.2	189257	189889
GCA_000181835.1	GCA_000181835.1_05520	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	184	184	100.00	100.00	184	WP_000054744.1	streptothricin N-acetyltransferase SatA	NA	NA	ABJC01000001.2	675193	675747
GCA_000181835.1	GCA_000181835.1_05673	alo	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	512	512	100.00	99.80	512	AAP27127.1	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	NA	NA	ABJC01000001.2	828154	829692
GCA_000181835.1	GCA_000181835.1_05815	bla2	BcII family subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	EXACTP	256	256	100.00	100.00	256	WP_000799223.1	BcII family subclass B1 metallo-beta-lactamase	NF033095.1	BcII family subclass B1 metallo-beta-lactamase	ABJC01000001.2	958690	959460
GCA_002954105.1	GCA_002954105.1_01624	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP014107.1	1572183	1572563
GCA_002954105.1	GCA_002954105.1_01625	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP014107.1	1572553	1574310
GCA_002954105.1	GCA_002954105.1_01626	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP014107.1	1574417	1575262
GCA_002954105.1	GCA_002954105.1_01769	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP014107.1	1710837	1712129
GCA_002954105.1	GCA_002954105.1_01816	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP014107.1	1759318	1761324
GCA_002954105.1	GCA_002954105.1_01817	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP014107.1	1761424	1763181
GCA_002954105.1	GCA_002954105.1_01818	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP014107.1	1763181	1763552
GCA_002954105.1	GCA_002954105.1_01893	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP014107.1	1839284	1840924
GCA_002954105.1	GCA_002954105.1_02307	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP014103.1	20096	20656
GCA_002954105.1	GCA_002954105.1_02308	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP014103.1	20841	22385
GCA_002954105.1	GCA_002954105.1_02309	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP014104.1	942	1685
GCA_943914075.1	GCA_943914075.1_00735	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CALUAQ010000005.1	51068	51442
GCA_943914075.1	GCA_943914075.1_01043	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	547	631	87.64	90.24	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CALUAQ010000007.1	91757	93400
GCA_000478115.1	GCA_000478115.1_02398	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515757.1	239	1093
GCA_015548685.1	GCA_015548685.1_01453	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JADMXM010000005.1	17633	19552
GCA_015548685.1	GCA_015548685.1_01473	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JADMXM010000005.1	39711	40442
GCA_002438315.1	GCA_002438315.1_00323	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	212	212	93.40	67.34	199	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	DJUB01000004.1	6198	6836
GCA_002438315.1	GCA_002438315.1_00325	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	93.22	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	DJUB01000004.1	7453	8916
GCA_002438315.1	GCA_002438315.1_00326	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	97.04	405	WP_063853689.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	DJUB01000004.1	9037	10254
GCA_002438315.1	GCA_002438315.1_01311	tcrB	copper-translocating P-type ATPase TcrB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	700	710	100.00	96.90	710	AAL05407.1	copper-translocating P-type ATPase TcrB	NA	NA	DJUB01000033.1	446	2548
GCA_014894835.1	GCA_014894835.1_01274	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACVMI010000001.1	1234548	1236188
GCA_000613565.1	GCA_000613565.1_00651	nimI	5-nitroimidazole reductase NimI	core	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	BLASTP	161	172	93.60	98.14	161	WP_021588763.1	5-nitroimidazole reductase NimI	NF000262.1	NimIJ family 5-nitroimidazole reductase	BAJF01000030.1	937	1422
GCA_000613565.1	GCA_000613565.1_02170	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	BAJF01000007.1	61145	63070
GCA_030228605.1	GCA_030228605.1_00051	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	48.36	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASOZY010000019.1	8352	8720
GCA_030228605.1	GCA_030228605.1_00181	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	JASOZY010000041.1	175	1215
GCA_030228605.1	GCA_030228605.1_00318	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JASOZY010000061.1	670	1401
GCA_902496525.1	GCA_902496525.1_00816	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	87.60	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CABVBJ010000016.1	1762	3240
GCA_938029425.1	GCA_938029425.1_02038	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CALHFZ010000076.1	7421	8800
GCA_023109515.1	GCA_023109515.1_00468	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JALDUM010000001.1	430109	431308
GCA_023109515.1	GCA_023109515.1_00606	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDUM010000001.1	587431	588894
GCA_023109515.1	GCA_023109515.1_00607	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDUM010000001.1	589014	590231
GCA_008620055.1	GCA_008620055.1_00022	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	AP020320.1	20386	20877
GCA_008620055.1	GCA_008620055.1_00027	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	AP020320.1	23091	23441
GCA_008620055.1	GCA_008620055.1_00181	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	AP020320.1	148164	148928
GCA_008620055.1	GCA_008620055.1_00182	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	AP020320.1	149209	149928
GCA_008620055.1	GCA_008620055.1_00183	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	AP020320.1	149963	150691
GCA_008620055.1	GCA_008620055.1_00185	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	AP020320.1	151221	151616
GCA_008620055.1	GCA_008620055.1_00186	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	AP020320.1	151655	152410
GCA_008620055.1	GCA_008620055.1_00194	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	AP020320.1	158612	159547
GCA_008620055.1	GCA_008620055.1_00195	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	AP020320.1	159549	160532
GCA_008620055.1	GCA_008620055.1_00200	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	AP020320.1	164662	165369
GCA_008620055.1	GCA_008620055.1_00201	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	AP020320.1	165494	166216
GCA_008620055.1	GCA_008620055.1_00240	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP020320.1	197349	198641
GCA_008620055.1	GCA_008620055.1_00360	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	AP020320.1	342278	343060
GCA_008620055.1	GCA_008620055.1_00361	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	AP020320.1	343186	343917
GCA_008620055.1	GCA_008620055.1_01304	seb	staphylococcal enterotoxin type B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	266	266	100.00	96.62	266	AAA88550.1	staphylococcal enterotoxin type B	NA	NA	AP020320.1	1273086	1273886
GCA_008620055.1	GCA_008620055.1_01769	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	AP020320.1	1740996	1742438
GCA_008620055.1	GCA_008620055.1_01943	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AP020320.1	1894242	1894661
GCA_008620055.1	GCA_008620055.1_02027	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	AP020320.1	1982994	1983959
GCA_008620055.1	GCA_008620055.1_02028	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	AP020320.1	1984526	1985473
GCA_008620055.1	GCA_008620055.1_02029	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	AP020320.1	1985475	1986452
GCA_008620055.1	GCA_008620055.1_02260	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	AP020320.1	2226642	2228171
GCA_008620055.1	GCA_008620055.1_02294	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AP020320.1	2271501	2272553
GCA_008620055.1	GCA_008620055.1_02394	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	AP020320.1	2378564	2380570
GCA_008620055.1	GCA_008620055.1_02395	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	AP020320.1	2380670	2382427
GCA_008620055.1	GCA_008620055.1_02396	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	AP020320.1	2382427	2382798
GCA_008620055.1	GCA_008620055.1_02405	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	AP020320.1	2389535	2390266
GCA_008620055.1	GCA_008620055.1_02406	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	AP020320.1	2390392	2391174
GCA_008620055.1	GCA_008620055.1_02487	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	AP020320.1	2485166	2486524
GCA_008620055.1	GCA_008620055.1_02682	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	AP020320.1	2713012	2714367
GCA_008620055.1	GCA_008620055.1_02719	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	AP020320.1	2747673	2748284
GCA_008620055.1	GCA_008620055.1_02739	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AP020320.1	2763115	2765034
GCA_008620055.1	GCA_008620055.1_02859	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	AP020320.1	2891419	2891553
GCA_008620055.1	GCA_008620055.1_02938	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	AP020321.1	4247	4864
GCA_008620055.1	GCA_008620055.1_02947	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	AP020321.1	10600	12039
GCA_008620055.1	GCA_008620055.1_02950	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	159	281	53.02	100.00	149	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	NA	AP020321.1	13623	14102
GCA_008620055.1	GCA_008620055.1_02951	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AP020321.1	14209	15966
GCA_008620055.1	GCA_008620055.1_02952	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AP020321.1	15956	16336
GCA_008620055.1	GCA_008620055.1_02956	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	AP020321.1	19419	19733
GCA_008620055.1	GCA_008620055.1_02957	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.77	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP020321.1	19733	21022
GCA_008620055.1	GCA_008620055.1_02958	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	AP020321.1	21040	21435
GCA_003194045.1	GCA_003194045.1_00196	tox	diphtheria toxin Tox	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	560	560	100.00	100.00	560	AAA32182.1	diphtheria toxin Tox	NA	NA	CP029644.1	171593	173275
GCA_003194045.1	GCA_003194045.1_00733	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP029644.1	734420	736201
GCA_003194045.1	GCA_003194045.1_00738	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP029644.1	741102	742883
GCA_003194045.1	GCA_003194045.1_00743	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP029644.1	747784	749565
GCA_003194045.1	GCA_003194045.1_01927	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_007929940.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP029644.1	1952670	1953521
GCA_003194045.1	GCA_003194045.1_02077	spaB	SpaA fimbrial minor subunit SpaB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	209	205	100.00	95.22	209	CAE50542.1	SpaA fimbrial minor subunit SpaB	NA	NA	CP029644.1	2111051	2111680
GCA_900475755.1	GCA_900475755.1_01176	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	98.06	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LS483411.1	1181184	1182578
GCA_030435155.1	GCA_030435155.1_02042	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	215	100.00	68.37	215	WP_035203840.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JAUIZN010000007.1	1465000	1465647
GCA_030435155.1	GCA_030435155.1_02100	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	81.50	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAUIZN010000007.1	1525277	1526755
GCA_030435155.1	GCA_030435155.1_03595	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	144	100.00	54.86	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAUIZN010000010.1	1289124	1289558
GCA_030435155.1	GCA_030435155.1_03893	msr	Msr family ABC-F type ribosomal protection protein	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	482	485	99.18	71.52	481	WP_101035417.1	Msr family ABC-F type ribosomal protection protein	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAUIZN010000012.1	35585	37033
GCA_030435155.1	GCA_030435155.1_03986	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	141	140	100.00	76.43	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	JAUIZN010000012.1	113758	114183
GCA_026153315.1	GCA_026153315.1_00080	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP110611.1	87697	88986
GCA_026153315.1	GCA_026153315.1_00083	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP110611.1	91164	91511
GCA_026153315.1	GCA_026153315.1_00151	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP110611.1	163404	163832
GCA_026153315.1	GCA_026153315.1_00876	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP110611.1	904073	904918
GCA_026153315.1	GCA_026153315.1_00877	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP110611.1	905025	906782
GCA_026153315.1	GCA_026153315.1_00878	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP110611.1	906772	907152
GCA_002197205.1	GCA_002197205.1_00751	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP021862.1	673526	675445
GCA_002197205.1	GCA_002197205.1_00761	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_002294505.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP021862.1	682140	683003
GCA_002197205.1	GCA_002197205.1_00763	spw	ANT(9) family aminoglycoside nucleotidyltransferase Spw	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	269	269	100.00	100.00	269	WP_002294509.1	ANT(9) family aminoglycoside nucleotidyltransferase Spw	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP021862.1	683706	684515
GCA_002197205.1	GCA_002197205.1_00767	lsa(E)	ABC-F type ribosomal protection protein Lsa(E)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	EXACTP	494	494	100.00	100.00	494	WP_002294513.1	ABC-F type ribosomal protection protein Lsa(E)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP021862.1	686582	688066
GCA_002197205.1	GCA_002197205.1_00768	lnu(B)	lincosamide nucleotidyltransferase Lnu(B)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	267	267	100.00	100.00	267	WP_002294514.1	lincosamide nucleotidyltransferase Lnu(B)	NF000235.3	lincosamide nucleotidyltransferase Lnu(B)	CP021862.1	688120	688923
GCA_002197205.1	GCA_002197205.1_00773	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP021862.1	692807	693715
GCA_002197205.1	GCA_002197205.1_00777	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP021862.1	695657	696451
GCA_002197205.1	GCA_002197205.1_00778	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP021862.1	697201	697938
GCA_002197205.1	GCA_002197205.1_00785	aadE	aminoglycoside 6-adenylyltransferase AadE	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	288	288	100.00	100.00	288	WP_001255868.1	aminoglycoside 6-adenylyltransferase AadE	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP021862.1	700904	701770
GCA_018128105.1	GCA_018128105.1_00880	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072365.1	1053859	1055049
GCA_018128105.1	GCA_018128105.1_02679	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	321	321	100.00	99.69	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP072366.1	1018267	1019232
GCA_018128105.1	GCA_018128105.1_02688	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP072366.1	1028545	1030470
GCA_001069055.1	GCA_001069055.1_00417	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JWGG01000028.1	818	2035
GCA_001069055.1	GCA_001069055.1_00418	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JWGG01000028.1	2155	3618
GCA_001058525.1	GCA_001058525.1_01900	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JUSD01000023.1	740	1594
GCA_003205835.1	GCA_003205835.1_01348	emrC	multidrug efflux transporter outer membrane subunit EmrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	497	497	100.00	96.98	497	CAQ45062.1	multidrug efflux transporter outer membrane subunit EmrC	NA	NA	CP029773.1	1440458	1441951
GCA_003205835.1	GCA_003205835.1_01349	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	392	393	100.00	99.24	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	CP029773.1	1441963	1443141
GCA_003205835.1	GCA_003205835.1_01350	emrB	multidrug efflux MFS transporter permease subunit EmrB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	528	528	100.00	99.62	528	CAQ45064.1	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	CP029773.1	1443149	1444735
GCA_003205835.1	GCA_003205835.1_01870	aph(3)-IIc	aminoglycoside O-phosphotransferase APH(3)-IIc	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	267	267	100.00	92.51	267	WP_012479999.1	aminoglycoside O-phosphotransferase APH(3)-IIc	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP029773.1	1977475	1978278
GCA_003205835.1	GCA_003205835.1_02113	aph(6)	APH(6) family putative aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	270	270	99.63	90.33	269	WP_012480135.1	APH(6) family putative aminoglycoside O-phosphotransferase	NF012160.0	APH(6) family putative aminoglycoside O-phosphotransferase	CP029773.1	2249582	2250394
GCA_003205835.1	GCA_003205835.1_02287	copA	laccase-like oxidase CopA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	622	623	100.00	98.39	623	ADR70747.1	laccase-like oxidase CopA	NA	NA	CP029773.1	2424478	2426346
GCA_003205835.1	GCA_003205835.1_02446	blaL1	L1 family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	290	290	100.00	97.93	290	WP_063842676.1	L1 family subclass B3 metallo-beta-lactamase	NF033106.1	L1 family subclass B3 metallo-beta-lactamase	CP029773.1	2605492	2606364
GCA_003205835.1	GCA_003205835.1_03357	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	155	155	100.00	96.13	155	WP_049443010.1	aminoglycoside 6-N-acetyltransferase	NF033075.0	aminoglycoside 6-N-acetyltransferase	CP029773.1	3616292	3616759
GCA_003205835.1	GCA_003205835.1_03469	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	304	100.00	69.41	304	WP_063842700.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP029773.1	3743768	3744679
GCA_003205835.1	GCA_003205835.1_03832	smeF	multidrug efflux RND transporter outer membrane subunit SmeF	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	461	466	98.93	98.70	461	CAC14596.1	multidrug efflux RND transporter outer membrane subunit SmeF	NA	NA	CP029773.1	4156029	4157414
GCA_003205835.1	GCA_003205835.1_03917	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	411	93.67	61.04	385	WP_011552636.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP029773.1	4250570	4251757
GCA_003205835.1	GCA_003205835.1_04150	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	144	150	88.00	53.03	132	WP_033959319.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP029773.1	4481738	4482172
GCA_029926905.1	GCA_029926905.1_00322	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAREFC010000016.1	539	2005
GCA_029926905.1	GCA_029926905.1_00323	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAREFC010000016.1	2104	3003
GCA_029926905.1	GCA_029926905.1_00325	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAREFC010000016.1	4307	4873
GCA_029926905.1	GCA_029926905.1_00326	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAREFC010000016.1	5051	6595
GCA_029926905.1	GCA_029926905.1_00336	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREFC010000017.1	87	467
GCA_029926905.1	GCA_029926905.1_00337	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREFC010000017.1	457	2214
GCA_029926905.1	GCA_029926905.1_00338	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREFC010000017.1	2321	3166
GCA_029926905.1	GCA_029926905.1_00344	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JAREFC010000018.1	409	1152
GCA_029926905.1	GCA_029926905.1_00345	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JAREFC010000018.1	1369	1773
GCA_029926905.1	GCA_029926905.1_00348	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JAREFC010000018.1	4185	7259
GCA_029926905.1	GCA_029926905.1_01276	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.78	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFC010000003.1	153478	154767
GCA_029926905.1	GCA_029926905.1_01280	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREFC010000003.1	156933	157280
GCA_029926905.1	GCA_029926905.1_01375	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.96	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAREFC010000003.1	247152	248795
GCA_024204905.1	GCA_024204905.1_00033	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP093198.1	37424	39430
GCA_024204905.1	GCA_024204905.1_00034	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP093198.1	39530	41287
GCA_024204905.1	GCA_024204905.1_00035	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP093198.1	41287	41658
GCA_024204905.1	GCA_024204905.1_00097	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP093198.1	106600	106836
GCA_024204905.1	GCA_024204905.1_00147	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP093198.1	164633	165700
GCA_024204905.1	GCA_024204905.1_00835	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP093198.1	879147	879632
GCA_024204905.1	GCA_024204905.1_00838	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP093198.1	881388	882827
GCA_024204905.1	GCA_024204905.1_02647	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP093200.1	8067	8801
GCA_024204905.1	GCA_024204905.1_02657	fosB4	fosfomycin resistance bacillithiol transferase FosB4	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_053032028.1	fosfomycin resistance bacillithiol transferase FosB4	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	CP093200.1	15344	15763
GCA_024204905.1	GCA_024204905.1_02666	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP093200.1	24377	25921
GCA_024204905.1	GCA_024204905.1_02667	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP093200.1	26105	26665
GCA_024204905.1	GCA_024204905.1_02669	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093200.1	27774	28154
GCA_024204905.1	GCA_024204905.1_02670	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.90	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093200.1	28144	29901
GCA_024204905.1	GCA_024204905.1_02671	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093200.1	30008	30853
GCA_946997545.1	GCA_946997545.1_01315	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAMPVT010000017.1	135	1100
GCA_946997545.1	GCA_946997545.1_01646	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAMPVT010000034.1	6608	8071
GCA_946997545.1	GCA_946997545.1_01647	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAMPVT010000034.1	8191	9408
GCA_022690025.1	GCA_022690025.1_00076	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCWF010000011.1	24463	25929
GCA_022690025.1	GCA_022690025.1_00077	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JALCWF010000011.1	26028	26927
GCA_022690025.1	GCA_022690025.1_00079	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCWF010000011.1	28231	28791
GCA_022690025.1	GCA_022690025.1_00080	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.42	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCWF010000011.1	28974	30518
GCA_022690025.1	GCA_022690025.1_00192	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	JALCWF010000016.1	142	1710
GCA_022690025.1	GCA_022690025.1_01753	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWF010000003.1	85223	85570
GCA_022690025.1	GCA_022690025.1_01756	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWF010000003.1	87738	89027
GCA_947252355.1	GCA_947252355.1_01732	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	77.24	51.58	95	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAMXVE010000030.1	8430	8795
GCA_011714705.1	GCA_011714705.1_00816	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RXXL01000023.1	14057	15976
GCA_011714705.1	GCA_011714705.1_01500	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXL01000044.1	2066	3487
GCA_017280035.1	GCA_017280035.1_00013	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP071172.1	15440	15937
GCA_017280035.1	GCA_017280035.1_00354	fexA	chloramphenicol/florfenicol efflux MFS transporter FexA	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	475	475	100.00	98.95	475	WP_015585966.1	chloramphenicol/florfenicol efflux MFS transporter FexA	NF000218.1	chloramphenicol/florfenicol efflux MFS transporter FexA	CP071172.1	384385	385812
GCA_017280035.1	GCA_017280035.1_00500	lsa(A)	ABC-F type ribosomal protection protein Lsa(A)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	498	498	100.00	99.40	498	WP_002365053.1	ABC-F type ribosomal protection protein Lsa(A)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP071172.1	521133	522629
GCA_003044645.1	GCA_003044645.1_01518	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	POXL01000006.1	51463	52323
GCA_003044645.1	GCA_003044645.1_01520	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	POXL01000006.1	53556	54371
GCA_003044645.1	GCA_003044645.1_01521	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	POXL01000006.1	54432	55235
GCA_003044645.1	GCA_003044645.1_01522	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	POXL01000006.1	55235	56071
GCA_016894185.1	GCA_016894185.1_00831	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	91.87	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP069790.1	954912	956243
GCA_016894185.1	GCA_016894185.1_04426	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.56	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP069790.1	5713434	5714315
GCA_028325895.1	GCA_028325895.1_00387	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQMJW010000001.1	201564	202781
GCA_028325895.1	GCA_028325895.1_00388	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQMJW010000001.1	202901	204364
GCA_028325895.1	GCA_028325895.1_00393	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQMJW010000001.1	206105	206533
GCA_028325895.1	GCA_028325895.1_01361	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQMJW010000003.1	159543	161267
GCA_028325895.1	GCA_028325895.1_01362	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQMJW010000003.1	161269	163005
GCA_019330145.1	GCA_019330145.1_00826	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073890.1	806403	806888
GCA_019330145.1	GCA_019330145.1_00829	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073890.1	808644	810083
GCA_019330145.1	GCA_019330145.1_00950	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073890.1	885711	886352
GCA_019330145.1	GCA_019330145.1_00971	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073890.1	905172	906017
GCA_019330145.1	GCA_019330145.1_00972	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073890.1	906124	907881
GCA_019330145.1	GCA_019330145.1_00973	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073890.1	907871	908251
GCA_019330145.1	GCA_019330145.1_02460	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073890.1	2423331	2424398
GCA_019330145.1	GCA_019330145.1_02511	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073890.1	2482196	2482432
GCA_019330145.1	GCA_019330145.1_02588	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073890.1	2565069	2565416
GCA_019330145.1	GCA_019330145.1_02591	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073890.1	2567585	2568883
GCA_019330145.1	GCA_019330145.1_02601	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073890.1	2577669	2578319
GCA_019330145.1	GCA_019330145.1_02602	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073890.1	2578401	2580044
GCA_019330145.1	GCA_019330145.1_02603	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073890.1	2580102	2580440
GCA_019330145.1	GCA_019330145.1_02649	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073890.1	2619406	2619777
GCA_019330145.1	GCA_019330145.1_02650	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073890.1	2619777	2621534
GCA_019330145.1	GCA_019330145.1_02651	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073890.1	2621634	2623640
GCA_019330145.1	GCA_019330145.1_02788	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073889.1	4321	5865
GCA_019330145.1	GCA_019330145.1_02789	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073889.1	6050	6610
GCA_002073715.2	GCA_002073715.2_01810	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP020452.2	1914886	1915722
GCA_002073715.2	GCA_002073715.2_01811	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP020452.2	1915722	1916141
GCA_002073715.2	GCA_002073715.2_01812	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP020452.2	1916586	1917401
GCA_002073715.2	GCA_002073715.2_01814	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP020452.2	1918633	1919493
GCA_002073715.2	GCA_002073715.2_01819	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	313	278	97.12	98.52	270	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP020452.2	1924229	1925170
GCA_002073715.2	GCA_002073715.2_01820	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP020452.2	1925170	1925589
GCA_002073715.2	GCA_002073715.2_01824	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089072.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CP020452.2	1928555	1929760
GCA_002073715.2	GCA_002073715.2_02423	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP020452.2	2560110	2561489
GCA_002529305.1	GCA_002529305.1_01644	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	NSLZ01000004.1	99810	100775
GCA_022835015.1	GCA_022835015.1_00199	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	BQNM01000001.1	194393	194839
GCA_022835015.1	GCA_022835015.1_00330	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	BQNM01000001.1	328945	329799
GCA_000018665.1	GCA_000018665.1_00487	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	79.00	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP000884.1	516588	518276
GCA_000018665.1	GCA_000018665.1_00488	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	65.22	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP000884.1	518288	518566
GCA_000018665.1	GCA_000018665.1_02441	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	275	94.91	60.15	261	WP_125064048.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP000884.1	2571149	2571931
GCA_000018665.1	GCA_000018665.1_04730	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	268	96.64	70.66	259	WP_114268491.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP000884.1	4996133	4996933
GCA_000018665.1	GCA_000018665.1_04760	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	302	99.34	54.93	304	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP000884.1	5033542	5034453
GCA_015260075.1	GCA_015260075.1_01263	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZXG010000003.1	92997	94187
GCA_900755475.1	GCA_900755475.1_00032	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAAEGO010000002.1	12321	14240
GCA_900755475.1	GCA_900755475.1_01206	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	91.16	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CAAEGO010000048.1	9891	11627
GCA_900755475.1	GCA_900755475.1_01207	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.11	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CAAEGO010000048.1	11629	13353
GCA_008586825.1	GCA_008586825.1_00721	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP043771.1	704635	706029
GCA_017565765.1	GCA_017565765.1_01277	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAGDYP010000003.1	147117	147443
GCA_018371015.1	GCA_018371015.1_00829	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	91.85	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAGYZH010000013.1	28496	30232
GCA_018371015.1	GCA_018371015.1_00830	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.11	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAGYZH010000013.1	30234	31958
GCA_009717675.1	GCA_009717675.1_00006	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMZA01000001.1	4698	5915
GCA_009717675.1	GCA_009717675.1_00007	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMZA01000001.1	6035	7498
GCA_009717675.1	GCA_009717675.1_00441	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.97	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMZA01000001.1	469006	470742
GCA_009717675.1	GCA_009717675.1_00442	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.64	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMZA01000001.1	470744	472468
GCA_022834995.1	GCA_022834995.1_03139	cblA	CblA family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	296	296	100.00	100.00	296	WP_005827792.1	CblA family class A beta-lactamase	NF033098.1	CblA family class A beta-lactamase	BQNL01000001.1	3747133	3748023
GCA_001028645.1	GCA_001028645.1_01222	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.16	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP007601.1	1229694	1230983
GCA_001028645.1	GCA_001028645.1_01942	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP007601.1	1960857	1961930
GCA_001028645.1	GCA_001028645.1_02040	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP007601.1	2074898	2075245
GCA_001028645.1	GCA_001028645.1_02044	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP007601.1	2077411	2078700
GCA_025151705.1	GCA_025151705.1_03918	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	494	99.60	64.63	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JALXVO010000008.1	4786	6264
GCA_001071575.1	GCA_001071575.1_00829	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JVRO01000014.1	4480	5340
GCA_001071575.1	GCA_001071575.1_00890	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JVRO01000014.1	57783	58643
GCA_000367505.1	GCA_000367505.1_02614	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	538	631	87.48	69.57	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BARH01000003.1	101176	102792
GCA_029850855.1	GCA_029850855.1_01147	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAOVAJ010000003.1	121559	123199
GCA_030546305.1	GCA_030546305.1_00581	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAUONR010000001.1	389500	390963
GCA_030546305.1	GCA_030546305.1_00582	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAUONR010000001.1	391083	392300
GCA_002310875.1	GCA_002310875.1_01157	dfrA1	trimethoprim-resistant dihydrofolate reductase DfrA1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	157	157	100.00	100.00	157	WP_000777554.1	trimethoprim-resistant dihydrofolate reductase DfrA1	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	CP017082.1	1196155	1196628
GCA_002310875.1	GCA_002310875.1_01158	sat2	streptothricin N-acetyltransferase Sat2	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	174	174	100.00	100.00	174	WP_000704156.1	streptothricin N-acetyltransferase Sat2	NF000358.1	streptothricin N-acetyltransferase Sat2	CP017082.1	1196723	1197247
GCA_002310875.1	GCA_002310875.1_01159	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001206315.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	CP017082.1	1197305	1198093
GCA_002310875.1	GCA_002310875.1_01243	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	189	144	100.00	93.75	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP017082.1	1288701	1289270
GCA_002310875.1	GCA_002310875.1_01244	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	90.11	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP017082.1	1289571	1289846
GCA_002310875.1	GCA_002310875.1_01246	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	537	561	95.19	85.32	538	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP017082.1	1290437	1292050
GCA_002310875.1	GCA_002310875.1_01247	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	120	121	100.00	82.64	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP017082.1	1292068	1292430
GCA_002310875.1	GCA_002310875.1_01252	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP017082.1	1296713	1297552
GCA_002310875.1	GCA_002310875.1_01253	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP017082.1	1297546	1297893
GCA_002310875.1	GCA_002310875.1_01254	aadA5	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA5	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_000503573.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA5	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP017082.1	1298099	1298887
GCA_002310875.1	GCA_002310875.1_01255	dfrA17	trimethoprim-resistant dihydrofolate reductase DfrA17	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	199	157	100.00	99.36	157	WP_001389366.1	trimethoprim-resistant dihydrofolate reductase DfrA17	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	CP017082.1	1299018	1299617
GCA_002310875.1	GCA_002310875.1_01264	aac(3)-IId	aminoglycoside N-acetyltransferase AAC(3)-IId	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	EXACTP	286	286	100.00	100.00	286	WP_000557454.1	aminoglycoside N-acetyltransferase AAC(3)-IId	NF033080.0	AAC(3)-II family aminoglycoside N-acetyltransferase	CP017082.1	1308876	1309736
GCA_002310875.1	GCA_002310875.1_01269	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP017082.1	1312804	1313640
GCA_002310875.1	GCA_002310875.1_01270	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP017082.1	1313640	1314443
GCA_002310875.1	GCA_002310875.1_01271	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043265.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP017082.1	1314504	1315319
GCA_002310875.1	GCA_002310875.1_01275	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP017082.1	1318089	1318904
GCA_002310875.1	GCA_002310875.1_01278	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP017082.1	1320396	1321256
GCA_002310875.1	GCA_002310875.1_01285	catA1	type A-1 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	PARTIALP	183	219	77.17	100.00	169	WP_000412211.1	type A-1 chloramphenicol O-acetyltransferase	NA	NA	CP017082.1	1326018	1326569
GCA_002310875.1	GCA_002310875.1_01871	tet(J)	tetracycline efflux MFS transporter Tet(J)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	398	398	100.00	99.75	398	WP_004245621.1	tetracycline efflux MFS transporter Tet(J)	NF012194.0	tetracycline efflux MFS transporter Tet(J)	CP017082.1	1958138	1959334
GCA_002310875.1	GCA_002310875.1_01882	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	194	194	100.00	100.00	194	AAD47284.1	tellurium resistance-associated protein TerZ	NA	NA	CP017082.1	1968580	1969164
GCA_002310875.1	GCA_002310875.1_01886	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	92.19	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP017082.1	1971909	1972487
GCA_002310875.1	GCA_002310875.1_03699	catA	type A-4 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	217	217	100.00	96.77	217	WP_063843208.1	type A-4 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP017082.1	3841754	3842407
GCA_002310875.1	GCA_002310875.1_03936	blaKPC-2	carbapenem-hydrolyzing class A beta-lactamase KPC-2	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	293	293	100.00	100.00	293	WP_004199234.1	carbapenem-hydrolyzing class A beta-lactamase KPC-2	NF012141.1	KPC family carbapenem-hydrolyzing class A beta-lactamase	CP017083.1	6147	7028
GCA_002310875.1	GCA_002310875.1_03957	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	PARTIALP	323	275	64.00	100.00	176	WP_063855066.1	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	CP017084.1	976	1947
GCA_002310875.1	GCA_002310875.1_03959	blaCTX-M-14	extended-spectrum class A beta-lactamase CTX-M-14	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_001617865.1	extended-spectrum class A beta-lactamase CTX-M-14	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	CP017084.1	3837	4712
GCA_002310875.1	GCA_002310875.1_04062	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP017084.1	95139	95954
GCA_002310875.1	GCA_002310875.1_04063	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP017084.1	96015	96818
GCA_002310875.1	GCA_002310875.1_04064	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP017084.1	96818	97654
GCA_002310875.1	GCA_002310875.1_04065	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP017084.1	98069	98929
GCA_002310875.1	GCA_002310875.1_04069	aac(3)-IId	aminoglycoside N-acetyltransferase AAC(3)-IId	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	EXACTP	286	286	100.00	100.00	286	WP_000557454.1	aminoglycoside N-acetyltransferase AAC(3)-IId	NF033080.0	AAC(3)-II family aminoglycoside N-acetyltransferase	CP017084.1	103901	104761
GCA_002310875.1	GCA_002310875.1_04073	dfrA12	trimethoprim-resistant dihydrofolate reductase DfrA12	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_001083725.1	trimethoprim-resistant dihydrofolate reductase DfrA12	NF000053.2	trimethoprim-resistant dihydrofolate reductase DfrA12	CP017084.1	107116	107613
GCA_002310875.1	GCA_002310875.1_04074	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206356.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP017084.1	108033	108812
GCA_002310875.1	GCA_002310875.1_04146	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP017084.1	162518	163333
GCA_002310875.1	GCA_002310875.1_04148	rmtB1	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	ALLELEP	251	251	100.00	100.00	251	WP_012372818.1	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NF033209.1	RmtB family 16S rRNA (guanine(1405)-N(7))-methyltransferase	CP017084.1	164462	165217
GCA_002310875.1	GCA_002310875.1_04152	tet(G)	tetracycline efflux MFS transporter Tet(G)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	391	391	100.00	100.00	391	WP_001257840.1	tetracycline efflux MFS transporter Tet(G)	NF012192.0	tetracycline efflux MFS transporter Tet(G)	CP017084.1	168922	170097
GCA_017299275.1	GCA_017299275.1_01054	smdA	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	591	591	100.00	98.48	591	BAF79679.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	NA	NA	CP071232.1	1099706	1101481
GCA_017299275.1	GCA_017299275.1_01055	smdB	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	592	592	100.00	98.65	592	BAF79680.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	NA	NA	CP071232.1	1101474	1103252
GCA_017299275.1	GCA_017299275.1_01070	sdeY	multidrug efflux RND transporter permease subunit SdeY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1048	1051	99.43	95.70	1046	BAC77251.1	multidrug efflux RND transporter permease subunit SdeY	NA	NA	CP071232.1	1112542	1115688
GCA_017299275.1	GCA_017299275.1_01956	sdeB	multidrug efflux RND transporter permease subunit SdeB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1047	1047	100.00	99.62	1047	AAO18187.2	multidrug efflux RND transporter permease subunit SdeB	NA	NA	CP071232.1	2018162	2021305
GCA_017299275.1	GCA_017299275.1_01957	sdeA	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	395	395	100.00	99.75	395	AAS55383.1	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	CP071232.1	2021330	2022517
GCA_017299275.1	GCA_017299275.1_02296	blaSRT	SRT/SST family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	378	378	100.00	99.47	378	WP_063864750.1	cephalosporin-hydrolyzing class C beta-lactamase SST-1	NF000423.2	SRT/SST family class C beta-lactamase	CP071232.1	2345831	2346967
GCA_017299275.1	GCA_017299275.1_02529	tet(41)	tetracycline efflux MFS transporter Tet(41)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	388	393	98.73	95.62	388	WP_063855881.1	tetracycline efflux MFS transporter Tet(41)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP071232.1	2615278	2616444
GCA_017299275.1	GCA_017299275.1_02613	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	91	102	90.20	71.58	95	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP071232.1	2705513	2705788
GCA_017299275.1	GCA_017299275.1_02627	ssmE	multidrug efflux SMR transporter SsmE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	106	110	96.36	100.00	106	BAF80121.1	multidrug efflux SMR transporter SsmE	NA	NA	CP071232.1	2720916	2721236
GCA_017299275.1	GCA_017299275.1_02729	smfY	multidrug efflux MFS transporter SmfY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	490	490	100.00	98.37	490	BAE79899.1	multidrug efflux MFS transporter SmfY	NA	NA	CP071232.1	2836702	2838174
GCA_017299275.1	GCA_017299275.1_02876	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	139	98.56	67.15	137	WP_004857515.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP071232.1	2978268	2978675
GCA_017299275.1	GCA_017299275.1_04304	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	146	146	100.00	100.00	146	WP_033639326.1	aminoglycoside 6-N-acetyltransferase	NF000021.4	aminoglycoside 6-N-acetyltransferase	CP071232.1	4464245	4464685
GCA_017299275.1	GCA_017299275.1_04800	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	81.27	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP071232.1	4987037	4987939
GCA_003264065.1	GCA_003264065.1_01295	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NAQU01000005.1	85102	85476
GCA_022869645.1	GCA_022869645.1_00510	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP064367.1	498729	500108
GCA_022869645.1	GCA_022869645.1_01568	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.21	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP064367.1	1551494	1553020
GCA_022869645.1	GCA_022869645.1_01762	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP064367.1	1753042	1754610
GCA_022869645.1	GCA_022869645.1_01764	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP064367.1	1755435	1756067
GCA_022869645.1	GCA_022869645.1_01765	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.57	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP064367.1	1756471	1757709
GCA_022869645.1	GCA_022869645.1_01942	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP064367.1	1929501	1930406
GCA_001072385.1	GCA_001072385.1_01451	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JVKU01000022.1	84647	85864
GCA_001072385.1	GCA_001072385.1_01452	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JVKU01000022.1	85984	87447
GCA_001072385.1	GCA_001072385.1_01818	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	578	578	100.00	100.00	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVKU01000027.1	73980	75716
GCA_001072385.1	GCA_001072385.1_01819	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	99.83	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVKU01000027.1	75718	77442
GCA_001047275.1	GCA_001047275.1_00350	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	99.51	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP012028.1	346425	347663
GCA_001047275.1	GCA_001047275.1_00351	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	99.52	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP012028.1	347913	348545
GCA_001047275.1	GCA_001047275.1_00353	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	99.23	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP012028.1	349182	350750
GCA_001047275.1	GCA_001047275.1_00754	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	507	100.00	99.41	507	AAD54074.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP012028.1	725722	727245
GCA_001047275.1	GCA_001047275.1_01484	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	301	301	100.00	100.00	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP012028.1	1455838	1456743
GCA_001047275.1	GCA_001047275.1_01756	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	459	459	100.00	100.00	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP012028.1	1707826	1709205
GCA_003522455.1	GCA_003522455.1_02015	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	DPFI01000035.1	5850	7139
GCA_003522455.1	GCA_003522455.1_02092	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	DPFI01000009.1	3362	4435
GCA_022699185.1	GCA_022699185.1_00793	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JALDAU010000001.1	805077	805814
GCA_022699185.1	GCA_022699185.1_00794	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALDAU010000001.1	806921	808840
GCA_027665925.1	GCA_027665925.1_01593	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	100.00	43.09	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQEIA010000038.1	7211	7564
GCA_030217265.1	GCA_030217265.1_01256	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JASONL010000002.1	465	1268
GCA_030217265.1	GCA_030217265.1_01257	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JASONL010000002.1	1268	2104
GCA_030217265.1	GCA_030217265.1_01259	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASONL010000002.1	2308	3483
GCA_030217265.1	GCA_030217265.1_01386	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	216	87.50	46.15	195	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JASONL010000030.1	3299	3952
GCA_030217265.1	GCA_030217265.1_01387	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASONL010000030.1	3987	5411
GCA_030217265.1	GCA_030217265.1_01395	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.18	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASONL010000030.1	13598	14452
GCA_030217265.1	GCA_030217265.1_01399	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.70	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASONL010000030.1	16174	17595
GCA_030217265.1	GCA_030217265.1_01727	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.49	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASONL010000047.1	99	1880
GCA_030217265.1	GCA_030217265.1_01856	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JASONL010000058.1	88	903
GCA_009496815.1	GCA_009496815.1_01532	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIIW01000006.1	37660	38859
GCA_022346315.1	GCA_022346315.1_01639	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	202	267	68.91	99.46	184	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	JAKRDC010000042.1	61	669
GCA_022346315.1	GCA_022346315.1_01640	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAKRDC010000042.1	669	1505
GCA_022346315.1	GCA_022346315.1_01641	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAKRDC010000042.1	1709	2884
GCA_022346315.1	GCA_022346315.1_01799	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDC010000053.1	667	1521
GCA_022346315.1	GCA_022346315.1_01808	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAKRDC010000059.1	88	903
GCA_022346315.1	GCA_022346315.1_01895	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	513	513	100.00	88.69	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JAKRDC010000005.1	87024	88565
GCA_900445785.1	GCA_900445785.1_02583	blaBOR-1	class A beta-lactamase BOR-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	305	305	100.00	100.00	305	WP_010926363.1	class A beta-lactamase BOR-1	NF040659.1	BOR family class A beta-lactamase	UFUC01000001.1	1937976	1938893
GCA_022689465.1	GCA_022689465.1_01163	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXH010000002.1	201174	202466
GCA_022689465.1	GCA_022689465.1_01300	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXH010000002.1	360041	361330
GCA_022689465.1	GCA_022689465.1_01301	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALCXH010000002.1	361348	361749
GCA_022689465.1	GCA_022689465.1_02021	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXH010000006.1	10180	11253
GCA_022689465.1	GCA_022689465.1_02239	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXH010000007.1	83372	83791
GCA_000318175.2	GCA_000318175.2_00767	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KB290930.1	484069	485988
GCA_002754035.1	GCA_002754035.1_00885	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP024592.1	1011357	1012157
GCA_001697685.1	GCA_001697685.1_00421	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016663.1	403328	404707
GCA_001697685.1	GCA_001697685.1_01481	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016663.1	1483095	1484621
GCA_001697685.1	GCA_001697685.1_01680	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016663.1	1694356	1695924
GCA_001697685.1	GCA_001697685.1_01682	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016663.1	1696749	1697381
GCA_001697685.1	GCA_001697685.1_01683	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016663.1	1697789	1699027
GCA_001697685.1	GCA_001697685.1_01810	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016663.1	1833411	1834316
GCA_001814525.1	GCA_001814525.1_01216	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	KV817094.1	1942	2757
GCA_001814525.1	GCA_001814525.1_01238	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV817094.1	20634	22076
GCA_001814525.1	GCA_001814525.1_01361	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV817095.1	135641	136495
GCA_000191465.1	GCA_000191465.1_00482	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP002421.1	531944	533512
GCA_000191465.1	GCA_000191465.1_00484	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP002421.1	534149	534781
GCA_000191465.1	GCA_000191465.1_00485	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.54	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP002421.1	535185	536423
GCA_000191465.1	GCA_000191465.1_01331	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP002421.1	1419580	1420959
GCA_000191465.1	GCA_000191465.1_01841	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.62	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP002421.1	1935152	1936678
GCA_024793755.1	GCA_024793755.1_02491	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	79.17	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JANUUQ010000001.1	3025958	3026839
GCA_024793755.1	GCA_024793755.1_04223	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.10	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	JANUUQ010000001.1	4889084	4890415
GCA_024793755.1	GCA_024793755.1_04379	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUUQ010000001.1	5062500	5064425
GCA_024793755.1	GCA_024793755.1_04917	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JANUUQ010000001.1	5618201	5619001
GCA_024793755.1	GCA_024793755.1_04918	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.55	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	JANUUQ010000001.1	5619288	5621213
GCA_001700755.2	GCA_001700755.2_01536	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	148	120	100.00	48.39	124	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JNBU02000048.1	235957	236403
GCA_001700755.2	GCA_001700755.2_01596	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JNBU02000048.1	309182	309604
GCA_019449375.1	GCA_019449375.1_00674	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZSL010000002.1	124419	124847
GCA_019449375.1	GCA_019449375.1_00964	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.28	639	WP_011860841.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHZSL010000003.1	11509	13428
GCA_023713505.1	GCA_023713505.1_01451	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAMAWA010000002.1	287411	288703
GCA_022749495.1	GCA_022749495.1_00911	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	88.41	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP094241.1	970227	971705
GCA_022749495.1	GCA_022749495.1_01323	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP094241.1	1402214	1403593
GCA_000688775.2	GCA_000688775.2_00989	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP007628.2	995853	996281
GCA_000688775.2	GCA_000688775.2_01107	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	236	399	59.15	91.95	236	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP007628.2	1120080	1120790
GCA_002356415.1	GCA_002356415.1_00721	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AP018338.1	708036	709253
GCA_002356415.1	GCA_002356415.1_00722	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AP018338.1	709373	710836
GCA_002356415.1	GCA_002356415.1_00727	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AP018338.1	712562	714481
GCA_000191725.2	GCA_000191725.2_00062	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	123	123	100.00	52.38	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AEXM01000032.1	3284	3655
GCA_015274115.1	GCA_015274115.1_01626	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.55	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPV010000004.1	182942	184231
GCA_015274115.1	GCA_015274115.1_02044	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	72.26	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JACGPV010000007.1	68269	68691
GCA_015274115.1	GCA_015274115.1_02086	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACGPV010000007.1	121463	122536
GCA_015274115.1	GCA_015274115.1_02165	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPV010000008.1	60434	61723
GCA_015274115.1	GCA_015274115.1_02499	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGPV010000016.1	530	1015
GCA_001021895.1	GCA_001021895.1_00033	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP007674.1	38226	38711
GCA_001021895.1	GCA_001021895.1_00039	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP007674.1	42465	44471
GCA_001021895.1	GCA_001021895.1_00040	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP007674.1	44571	45557
GCA_001021895.1	GCA_001021895.1_00117	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP007674.1	130861	132219
GCA_001021895.1	GCA_001021895.1_00320	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP007674.1	360656	362011
GCA_001021895.1	GCA_001021895.1_00358	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP007674.1	395240	395851
GCA_001021895.1	GCA_001021895.1_00824	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.11	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP007674.1	862608	863336
GCA_001021895.1	GCA_001021895.1_00825	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.52	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP007674.1	863360	864088
GCA_001021895.1	GCA_001021895.1_01447	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP007674.1	1525704	1526681
GCA_001021895.1	GCA_001021895.1_01448	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP007674.1	1526683	1527621
GCA_001021895.1	GCA_001021895.1_01623	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP007674.1	1674347	1675099
GCA_001021895.1	GCA_001021895.1_01796	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP007674.1	1867431	1868723
GCA_001021895.1	GCA_001021895.1_01838	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP007674.1	1905965	1906681
GCA_001021895.1	GCA_001021895.1_01841	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP007674.1	1908456	1909178
GCA_001021895.1	GCA_001021895.1_01842	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP007674.1	1909303	1910010
GCA_001021895.1	GCA_001021895.1_01852	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP007674.1	1921659	1922642
GCA_001021895.1	GCA_001021895.1_01853	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP007674.1	1922644	1923579
GCA_001021895.1	GCA_001021895.1_02011	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP007674.1	2051944	2052294
GCA_001021895.1	GCA_001021895.1_02016	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP007674.1	2054508	2054999
GCA_001021895.1	GCA_001021895.1_02094	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP007674.1	2112655	2112789
GCA_001021895.1	GCA_001021895.1_02242	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP007674.1	2264838	2266280
GCA_001021895.1	GCA_001021895.1_02417	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP007674.1	2418028	2418447
GCA_001021895.1	GCA_001021895.1_02504	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP007674.1	2507686	2508651
GCA_001021895.1	GCA_001021895.1_02505	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP007674.1	2509218	2510165
GCA_001021895.1	GCA_001021895.1_02506	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP007674.1	2510167	2511144
GCA_001021895.1	GCA_001021895.1_02727	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.02	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP007674.1	2750601	2752130
GCA_001021895.1	GCA_001021895.1_02761	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP007674.1	2795458	2796510
GCA_001021895.1	GCA_001021895.1_02819	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP007675.1	8520	8900
GCA_001021895.1	GCA_001021895.1_02820	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.04	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP007675.1	8890	10647
GCA_001021895.1	GCA_001021895.1_02821	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP007675.1	10754	11599
GCA_001021895.1	GCA_001021895.1_02837	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP007675.1	22479	23096
GCA_000192275.1	GCA_000192275.1_01910	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	GL872447.1	1966217	1966645
GCA_937926985.1	GCA_937926985.1_01450	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CALBCK010000116.1	7892	8218
GCA_000614285.1	GCA_000614285.1_02059	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	BAKP01000009.1	64170	65135
GCA_000614285.1	GCA_000614285.1_02464	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	BAKP01000004.1	74158	75348
GCA_017167785.1	GCA_017167785.1_01927	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAFDPE010000002.1	605758	606831
GCA_017167785.1	GCA_017167785.1_02235	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	69.06	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAFDPE010000003.1	258909	259346
GCA_017167785.1	GCA_017167785.1_02292	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFDPE010000004.1	52847	54136
GCA_017167785.1	GCA_017167785.1_02598	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAFDPE010000008.1	15080	15427
GCA_017167785.1	GCA_017167785.1_02602	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFDPE010000008.1	19110	20402
GCA_017167785.1	GCA_017167785.1_02609	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAFDPE010000008.1	24121	24966
GCA_017167785.1	GCA_017167785.1_02610	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAFDPE010000008.1	25073	26830
GCA_017167785.1	GCA_017167785.1_02611	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAFDPE010000008.1	26820	27200
GCA_030503915.1	GCA_030503915.1_00784	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	302	97.68	57.48	301	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP129980.1	835690	836580
GCA_024295785.1	GCA_024295785.1_01079	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPP010000003.1	52313	53776
GCA_024295785.1	GCA_024295785.1_01080	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPP010000003.1	53896	55113
GCA_024295785.1	GCA_024295785.1_01483	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.32	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCPP010000004.1	195496	197232
GCA_024295785.1	GCA_024295785.1_01484	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.04	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCPP010000004.1	197234	198958
GCA_900476475.1	GCA_900476475.1_00945	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	LS483450.1	897825	899024
GCA_900476475.1	GCA_900476475.1_01138	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	LS483450.1	1074779	1075429
GCA_900476475.1	GCA_900476475.1_01162	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LS483450.1	1096274	1098193
GCA_017898045.1	GCA_017898045.1_00778	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGMUP010000001.1	815544	816836
GCA_017898045.1	GCA_017898045.1_02517	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGMUP010000012.1	65487	66779
GCA_017898045.1	GCA_017898045.1_02521	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAGMUP010000012.1	70462	70809
GCA_009378645.1	GCA_009378645.1_01441	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCO01000021.1	112460	113401
GCA_001029815.1	GCA_001029815.1_00122	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.83	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP007667.1	127162	128688
GCA_001029815.1	GCA_001029815.1_01178	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP007667.1	1199731	1201110
GCA_001029815.1	GCA_001029815.1_01930	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP007667.1	1968925	1969830
GCA_001029815.1	GCA_001029815.1_02056	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.06	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP007667.1	2105510	2106748
GCA_001029815.1	GCA_001029815.1_02057	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP007667.1	2107156	2107788
GCA_001029815.1	GCA_001029815.1_02059	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP007667.1	2108613	2110181
GCA_024104915.1	GCA_024104915.1_00223	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTT010000014.1	2061	2471
GCA_000931625.1	GCA_000931625.1_00397	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP007472.1	397416	398810
GCA_001072745.1	GCA_001072745.1_00333	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JVIQ01000007.1	59928	61847
GCA_001072745.1	GCA_001072745.1_01825	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	91.52	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVIQ01000017.1	74703	76439
GCA_001072745.1	GCA_001072745.1_01826	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.99	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVIQ01000017.1	76441	78165
GCA_000299015.1	GCA_000299015.1_00960	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP001845.1	903405	904604
GCA_022346135.1	GCA_022346135.1_01425	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.59	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDH010000031.1	2333	3187
GCA_000162475.2	GCA_000162475.2_00793	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KI391971.1	819260	820900
GCA_000162475.2	GCA_000162475.2_01151	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	97.89	57.55	139	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KI391971.1	1189173	1189601
GCA_000507905.1	GCA_000507905.1_00948	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KI669541.1	1056704	1057030
GCA_004125365.1	GCA_004125365.1_00053	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	PJLY01000023.1	248	1093
GCA_004125365.1	GCA_004125365.1_00054	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	PJLY01000023.1	1200	2957
GCA_004125365.1	GCA_004125365.1_00055	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	PJLY01000023.1	2947	3327
GCA_004125365.1	GCA_004125365.1_01649	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PJLY01000002.1	151064	152356
GCA_000143585.1	GCA_000143585.1_02109	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GL379576.1	223943	225583
GCA_007991655.1	GCA_007991655.1_03779	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	148	150	91.33	57.66	137	WP_033959319.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	BJYT01000016.1	16848	17294
GCA_900324215.1	GCA_900324215.1_00125	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	LT992464.1	124353	125330
GCA_900324215.1	GCA_900324215.1_00126	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	LT992464.1	125332	126279
GCA_900324215.1	GCA_900324215.1_00127	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	LT992464.1	126847	127812
GCA_900324215.1	GCA_900324215.1_00387	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	LT992464.1	365497	366939
GCA_900324215.1	GCA_900324215.1_00551	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	LT992464.1	530763	530897
GCA_900324215.1	GCA_900324215.1_00618	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	LT992464.1	583098	583589
GCA_900324215.1	GCA_900324215.1_00623	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	LT992464.1	585751	586101
GCA_900324215.1	GCA_900324215.1_00644	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	115	131	84.73	90.99	111	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	LT992464.1	605724	606071
GCA_900324215.1	GCA_900324215.1_00645	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	95.34	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LT992464.1	606143	607432
GCA_900324215.1	GCA_900324215.1_00646	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	96.15	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	LT992464.1	607432	607746
GCA_900324215.1	GCA_900324215.1_00833	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LT992464.1	753301	754593
GCA_900324215.1	GCA_900324215.1_00952	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	LT992464.1	896733	897515
GCA_900324215.1	GCA_900324215.1_00953	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	LT992464.1	897641	898372
GCA_900324215.1	GCA_900324215.1_00957	vga(E)	ABC-F type ribosomal protection protein Vga(E)	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	CLINDAMYCIN/LINCOMYCIN/RETAPAMULIN/VIRGINIAMYCIN	EXACTP	524	524	100.00	100.00	524	WP_031795517.1	ABC-F type ribosomal protection protein Vga(E)	NF000170.2	Vga family ABC-F type ribosomal protection protein	LT992464.1	901781	903355
GCA_900324215.1	GCA_900324215.1_01009	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	279	250	100.00	96.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	LT992464.1	955911	956750
GCA_900324215.1	GCA_900324215.1_01667	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LT992464.1	1653091	1655010
GCA_900324215.1	GCA_900324215.1_02290	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.67	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	LT992464.1	2258022	2259377
GCA_900324215.1	GCA_900324215.1_02551	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	LT992464.1	2531786	2533144
GCA_900324215.1	GCA_900324215.1_02623	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LT992464.1	2608396	2608776
GCA_900324215.1	GCA_900324215.1_02624	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LT992464.1	2608766	2610523
GCA_900324215.1	GCA_900324215.1_02625	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LT992464.1	2610630	2611475
GCA_900324215.1	GCA_900324215.1_02628	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	LT992464.1	2614217	2614714
GCA_900324215.1	GCA_900324215.1_02641	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	LT992464.1	2624586	2625965
GCA_900324215.1	GCA_900324215.1_02656	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LT992464.1	2637948	2639954
GCA_900324215.1	GCA_900324215.1_02743	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	98.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	LT992464.1	2728260	2729312
GCA_900324215.1	GCA_900324215.1_02779	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	LT992464.1	2776101	2777630
GCA_003438305.1	GCA_003438305.1_02080	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	648	641	99.53	99.37	638	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	QSTW01000026.1	47263	49209
GCA_003438305.1	GCA_003438305.1_03100	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	QSTW01000050.1	4071	4871
GCA_030177215.1	GCA_030177215.1_01185	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASCSE010000012.1	1539	2384
GCA_030177215.1	GCA_030177215.1_01186	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASCSE010000012.1	2491	4248
GCA_030177215.1	GCA_030177215.1_01187	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASCSE010000012.1	4238	4618
GCA_030177215.1	GCA_030177215.1_01190	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JASCSE010000012.1	6419	7885
GCA_030177215.1	GCA_030177215.1_01215	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	522	522	100.00	99.62	522	WP_032489639.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	JASCSE010000015.1	79	1647
GCA_030177215.1	GCA_030177215.1_01230	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JASCSE010000018.1	732	2111
GCA_030177215.1	GCA_030177215.1_01364	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASCSE010000002.1	130503	131795
GCA_030177215.1	GCA_030177215.1_01674	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	99.07	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JASCSE010000023.1	136	459
GCA_030177215.1	GCA_030177215.1_01677	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	161	161	100.00	100.00	161	WP_011428879.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JASCSE010000025.1	282	767
GCA_030177215.1	GCA_030177215.1_01891	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	115	131	84.73	90.99	111	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JASCSE010000003.1	208895	209242
GCA_030177215.1	GCA_030177215.1_01895	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	JASCSE010000003.1	214009	214647
GCA_009648915.1	GCA_009648915.1_01250	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	122	102	100.00	67.74	124	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP045769.1	1380680	1381048
GCA_009648915.1	GCA_009648915.1_01888	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	100.00	77.30	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP045769.1	2001454	2001885
GCA_009648915.1	GCA_009648915.1_01928	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.45	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP045769.1	2049516	2050631
GCA_009648915.1	GCA_009648915.1_01929	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	90.62	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP045769.1	2050773	2054432
GCA_009648915.1	GCA_009648915.1_01932	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	94.07	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	CP045769.1	2056848	2059022
GCA_009648915.1	GCA_009648915.1_02810	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	95.74	141	WP_038415208.1	fosfomycin resistance glutathione transferase FosA	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	CP045769.1	2969314	2969739
GCA_009648915.1	GCA_009648915.1_02954	ampC-Ecan	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	381	381	100.00	99.48	381	WP_006178946.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	NF041666.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	CP045769.1	3122613	3123758
GCA_009648915.1	GCA_009648915.1_03539	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	88.81	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP045769.1	3705187	3706080
GCA_003044825.1	GCA_003044825.1_00029	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.24	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	POXZ01000001.1	26873	28399
GCA_003044825.1	GCA_003044825.1_00487	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	POXZ01000001.1	450200	451579
GCA_003044825.1	GCA_003044825.1_01063	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.42	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	POXZ01000003.1	97319	98557
GCA_022689285.1	GCA_022689285.1_01516	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXQ010000004.1	45338	45757
GCA_022689285.1	GCA_022689285.1_01955	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXQ010000006.1	4239	5531
GCA_022689285.1	GCA_022689285.1_02092	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXQ010000006.1	163106	164395
GCA_022689285.1	GCA_022689285.1_02093	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALCXQ010000006.1	164413	164814
GCA_022689285.1	GCA_022689285.1_02258	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXQ010000007.1	146201	147274
GCA_018916935.1	GCA_018916935.1_02006	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHLNS010000003.1	60197	61270
GCA_018916935.1	GCA_018916935.1_02174	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHLNS010000004.1	31700	32047
GCA_018916935.1	GCA_018916935.1_02177	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	85.55	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLNS010000004.1	34216	35514
GCA_018916935.1	GCA_018916935.1_02394	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLNS010000005.1	61465	62754
GCA_018916935.1	GCA_018916935.1_02631	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHLNS010000008.1	3696	4541
GCA_018916935.1	GCA_018916935.1_02632	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHLNS010000008.1	4648	6405
GCA_018916935.1	GCA_018916935.1_02633	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHLNS010000008.1	6395	6775
GCA_001812725.1	GCA_001812725.1_01334	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV810201.1	330795	332714
GCA_009730115.1	GCA_009730115.1_01259	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP046301.1	1274575	1275864
GCA_009730115.1	GCA_009730115.1_01262	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP046301.1	1278032	1278379
GCA_009730115.1	GCA_009730115.1_02236	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP046302.1	8016	9482
GCA_016888605.1	GCA_016888605.1_00030	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFEKM010000005.1	28133	29422
GCA_016888605.1	GCA_016888605.1_00107	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	129	131	85.50	97.32	112	AAA27589.1	thioredoxin-dependent arsenate reductase	NA	NA	JAFEKM010000005.1	89701	90090
GCA_016888605.1	GCA_016888605.1_00108	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	96.97	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFEKM010000005.1	90162	91451
GCA_016888605.1	GCA_016888605.1_00322	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	98.86	53.31	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAFEKM010000002.1	212556	213623
GCA_016888605.1	GCA_016888605.1_00949	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAFEKM010000002.1	826864	827283
GCA_016888605.1	GCA_016888605.1_02348	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.79	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFEKM010000003.1	165687	166979
GCA_902387715.1	GCA_902387715.1_00597	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	149	144	100.00	61.11	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	LR699005.1	587177	587626
GCA_902387715.1	GCA_902387715.1_03330	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	233	233	99.57	78.11	233	WP_003436401.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	LR699005.1	3321101	3321802
GCA_000296405.1	GCA_000296405.1_01337	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	43.83	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JH815194.1	267615	269039
GCA_000296405.1	GCA_000296405.1_01338	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	86.70	45.64	195	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JH815194.1	269074	269727
GCA_005888175.1	GCA_005888175.1_02019	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LNKQ01000066.1	19098	20492
GCA_000162935.1	GCA_000162935.1_01485	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	GG698713.1	223330	224520
GCA_016791585.1	GCA_016791585.1_02461	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	62	25	100.00	92.00	25	AAC21574.1	delta-hemolysin	NA	NA	JAENGU010000004.1	28174	28362
GCA_030229145.1	GCA_030229145.1_00023	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPGC010000012.1	248	1102
GCA_030229145.1	GCA_030229145.1_00035	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPGC010000014.1	3465	4316
GCA_030229145.1	GCA_030229145.1_00039	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPGC010000015.1	1844	3019
GCA_019375485.1	GCA_019375485.1_01428	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCB010000029.1	11277	12467
GCA_019375485.1	GCA_019375485.1_01908	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	321	100.00	99.69	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCB010000003.1	146878	147843
GCA_000334655.1	GCA_000334655.1_00941	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	KB371508.1	886528	887727
GCA_000183445.2	GCA_000183445.2_00400	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	AENT01000024.1	45732	46463
GCA_000183445.2	GCA_000183445.2_00657	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AENT01000016.1	66	1985
GCA_003494105.1	GCA_003494105.1_00190	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.34	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQIX01000001.1	218091	219485
GCA_002097035.1	GCA_002097035.1_00141	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP020764.1	147404	148477
GCA_002097035.1	GCA_002097035.1_00283	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP020764.1	299523	300815
GCA_002097035.1	GCA_002097035.1_02199	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP020764.1	2214007	2214426
GCA_016695195.1	GCA_016695195.1_00421	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP063274.1	431839	433131
GCA_016695195.1	GCA_016695195.1_00507	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP063274.1	508053	509345
GCA_016695195.1	GCA_016695195.1_00508	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP063274.1	509363	509764
GCA_016695195.1	GCA_016695195.1_00527	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP063274.1	525534	527540
GCA_016695195.1	GCA_016695195.1_00530	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP063274.1	528837	530126
GCA_016695195.1	GCA_016695195.1_01484	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP063274.1	1460877	1462316
GCA_001815155.1	GCA_001815155.1_00008	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV819452.1	200	1054
GCA_018884085.1	GCA_018884085.1_01998	blaCSA	CSA family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	BLASTP	375	375	100.00	98.67	375	WP_004384957.1	class C beta-lactamase CSA-2	NF033698.1	CSA family class C beta-lactamase	CP049147.1	2073792	2074919
GCA_018884085.1	GCA_018884085.1_02064	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	95.83	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP049147.1	2142459	2143037
GCA_018884085.1	GCA_018884085.1_02068	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	193	193	100.00	93.78	193	AAA86846.1	tellurium resistance-associated protein TerZ	NA	NA	CP049147.1	2145784	2146365
GCA_018884085.1	GCA_018884085.1_02075	terW	tellurium resistance protein TerW	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	155	155	100.00	99.35	155	AAC44736.1	tellurium resistance protein TerW	NA	NA	CP049147.1	2152935	2153402
GCA_018884085.1	GCA_018884085.1_02157	fos	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	88.15	135	WP_015741374.1	FosA family fosfomycin resistance glutathione transferase	NF000339.2	FosA family fosfomycin resistance glutathione transferase	CP049147.1	2238129	2238539
GCA_018884085.1	GCA_018884085.1_03924	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP049147.1	4052424	4053824
GCA_018884085.1	GCA_018884085.1_03925	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP049147.1	4053821	4054501
GCA_018884085.1	GCA_018884085.1_03926	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	BLASTP	309	309	100.00	99.68	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP049147.1	4054556	4055485
GCA_018884085.1	GCA_018884085.1_03927	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP049147.1	4055490	4055870
GCA_018884085.1	GCA_018884085.1_03928	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP049147.1	4055910	4056806
GCA_018884085.1	GCA_018884085.1_03929	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.67	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP049147.1	4056806	4058623
GCA_018884085.1	GCA_018884085.1_03933	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	95.10	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP049147.1	4060605	4063052
GCA_018884085.1	GCA_018884085.1_03935	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.66	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP049147.1	4063706	4066852
GCA_018884085.1	GCA_018884085.1_03936	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	96.28	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP049147.1	4066863	4068155
GCA_018884085.1	GCA_018884085.1_03937	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	97.44	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP049147.1	4068269	4068622
GCA_018884085.1	GCA_018884085.1_03938	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.05	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP049147.1	4068650	4070035
GCA_018884085.1	GCA_018884085.1_03939	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP049147.1	4070225	4070905
GCA_018884085.1	GCA_018884085.1_03940	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	493	491	100.00	98.57	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP049147.1	4070898	4072379
GCA_018884085.1	GCA_018884085.1_03941	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	EXACTP	143	143	100.00	100.00	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP049147.1	4072624	4073055
GCA_018884085.1	GCA_018884085.1_04048	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	86.96	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP049147.1	4197523	4198425
GCA_018884085.1	GCA_018884085.1_04260	dfrA51	trimethoprim-resistant dihydrofolate reductase DfrA51	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	158	158	100.00	90.51	158	WP_000781812.1	trimethoprim-resistant dihydrofolate reductase DfrA51	NF047324.1	trimethoprim-resistant dihydrofolate reductase DfrA51	CP049149.1	57283	57759
GCA_018884085.1	GCA_018884085.1_04327	cpa	omptin family outer membrane protease Cpa	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	ASR82161.1	omptin family outer membrane protease Cpa	NA	NA	CP049148.1	6359	7297
GCA_002302595.1	GCA_002302595.1_02459	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	45.63	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP022383.1	2655538	2655864
GCA_902387355.1	GCA_902387355.1_00967	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	LR699002.1	1101011	1102930
GCA_022070465.1	GCA_022070465.1_00959	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035265.1	902527	903726
GCA_014265125.1	GCA_014265125.1_00131	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMXS010000013.1	16606	18150
GCA_014265125.1	GCA_014265125.1_00132	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMXS010000013.1	18328	18894
GCA_014265125.1	GCA_014265125.1_00196	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXS010000017.1	495	1787
GCA_014265125.1	GCA_014265125.1_00200	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMXS010000017.1	5470	5817
GCA_014265125.1	GCA_014265125.1_00211	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMXS010000018.1	5352	5723
GCA_014265125.1	GCA_014265125.1_00212	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMXS010000018.1	5723	7480
GCA_014265125.1	GCA_014265125.1_00213	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMXS010000018.1	7580	9586
GCA_014265125.1	GCA_014265125.1_00226	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMXS010000020.1	2463	2867
GCA_014265125.1	GCA_014265125.1_00227	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMXS010000020.1	3084	3827
GCA_014265125.1	GCA_014265125.1_00230	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMXS010000022.1	421	1155
GCA_014265125.1	GCA_014265125.1_00906	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXS010000005.1	42644	43936
GCA_014265125.1	GCA_014265125.1_01016	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMXS010000006.1	72265	73110
GCA_014265125.1	GCA_014265125.1_01017	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMXS010000006.1	73217	74974
GCA_014265125.1	GCA_014265125.1_01018	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMXS010000006.1	74964	75344
GCA_014265125.1	GCA_014265125.1_01072	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMXS010000007.1	38367	40007
GCA_902485365.1	GCA_902485365.1_00241	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.50	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CABTKJ010000021.1	6023	7501
GCA_902485365.1	GCA_902485365.1_01458	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	45.90	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABTKJ010000149.1	18320	18742
GCA_009377295.1	GCA_009377295.1_00563	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	97.56	44.64	280	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	VXLF01000012.1	54561	55424
GCA_009377295.1	GCA_009377295.1_03216	tetB(58)	tetracycline efflux ABC transporter Tet(58) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	271	271	100.00	91.88	271	WP_071223302.1	tetracycline efflux ABC transporter Tet(58) subunit B	NA	NA	VXLF01000003.1	173340	174155
GCA_009377295.1	GCA_009377295.1_03394	taeA	ABC-F type ribosomal protection protein TaeA	core	AMR	AMR	PLEUROMUTILIN	TIAMULIN	BLASTP	651	648	100.00	91.86	651	WP_071223118.1	ABC-F type ribosomal protection protein TaeA	NA	NA	VXLF01000003.1	381922	383877
GCA_009377295.1	GCA_009377295.1_03802	aac(2)-IIb	kasugamycin N-acetyltransferase AAC(2)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	HMM	239	240	99.58	67.78	239	WP_071224044.1	kasugamycin N-acetyltransferase AAC(2)-IIb	NF033472.1	kasugamycin N-acetyltransferase AAC(2)-IIb	VXLF01000004.1	195598	196317
GCA_009377295.1	GCA_009377295.1_03970	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	67.59	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	VXLF01000004.1	382714	383364
GCA_009377295.1	GCA_009377295.1_04077	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	211	212	99.53	77.25	211	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	VXLF01000005.1	10466	11101
GCA_009377295.1	GCA_009377295.1_04157	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	92.91	48.81	252	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	VXLF01000005.1	83922	84731
GCA_009377295.1	GCA_009377295.1_04260	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	498	494	99.60	62.20	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	VXLF01000005.1	189822	191318
GCA_009377295.1	GCA_009377295.1_05921	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	312	304	92.11	66.90	287	WP_087344360.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	VXLF01000009.1	204580	205518
GCA_002318615.1	GCA_002318615.1_00373	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.26	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	NGBO01000015.1	14013	15539
GCA_002318615.1	GCA_002318615.1_01627	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	NGBO01000005.1	126548	127453
GCA_002318615.1	GCA_002318615.1_01688	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	96.67	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	NGBO01000006.1	49401	50264
GCA_002318615.1	GCA_002318615.1_01689	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	NGBO01000006.1	50281	51519
GCA_000187505.1	GCA_000187505.1_00993	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.01	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	GL732449.1	984432	986168
GCA_000187505.1	GCA_000187505.1_00994	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.91	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	GL732449.1	986170	987894
GCA_000187505.1	GCA_000187505.1_01681	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GL732449.1	1710874	1712769
GCA_938034465.1	GCA_938034465.1_01517	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CALHLH010000042.1	3154	5079
GCA_938034465.1	GCA_938034465.1_02141	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CALHLH010000067.1	47056	48246
GCA_938034465.1	GCA_938034465.1_02227	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	392	321	93.15	100.00	299	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CALHLH010000068.1	64484	65662
GCA_029925195.1	GCA_029925195.1_00088	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREHJ010000013.1	6010	6411
GCA_029925195.1	GCA_029925195.1_00089	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHJ010000013.1	6429	7718
GCA_029925195.1	GCA_029925195.1_00090	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAREHJ010000013.1	7718	8032
GCA_029925195.1	GCA_029925195.1_01071	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHJ010000002.1	317900	319192
GCA_024104375.1	GCA_024104375.1_01118	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHAVD010000021.1	3173	5179
GCA_024104375.1	GCA_024104375.1_01628	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHAVD010000003.1	4354	5646
GCA_024104375.1	GCA_024104375.1_01935	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHAVD010000004.1	160984	162057
GCA_024104375.1	GCA_024104375.1_02475	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHAVD010000009.1	65608	66027
GCA_001813175.1	GCA_001813175.1_02018	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV811691.1	19624	21048
GCA_003474305.1	GCA_003474305.1_00574	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	297	300	95.33	50.00	288	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	QROI01000012.1	111604	112497
GCA_003474305.1	GCA_003474305.1_01703	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	QROI01000026.1	259	771
GCA_003474305.1	GCA_003474305.1_01704	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	QROI01000026.1	796	2001
GCA_003474305.1	GCA_003474305.1_01833	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	QROI01000003.1	19776	21701
GCA_003474305.1	GCA_003474305.1_01843	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_063844771.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	QROI01000003.1	35697	36497
GCA_003474305.1	GCA_003474305.1_02162	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	QROI01000036.1	19937	20902
GCA_002091815.1	GCA_002091815.1_04386	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	49.45	91	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	BDAL01000054.1	24463	24738
GCA_002091815.1	GCA_002091815.1_04787	tbtM	multidrug efflux RND transporter outer membrane channel subunit TbtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	476	476	100.00	98.95	476	AAD15665.1	multidrug efflux RND transporter outer membrane channel subunit TbtM	NA	NA	BDAL01000076.1	898	2328
GCA_002091815.1	GCA_002091815.1_04788	tbtB	multidrug efflux RND transporter permease subunit TbtB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1046	1046	100.00	94.46	1046	AAD15664.1	multidrug efflux RND transporter permease subunit TbtB	NA	NA	BDAL01000076.1	2325	5465
GCA_938044185.1	GCA_938044185.1_00961	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	92.48	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CALIQH010000129.1	415	1893
GCA_015666945.1	GCA_015666945.1_01652	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADPDF010000005.1	75557	77020
GCA_015666945.1	GCA_015666945.1_01653	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADPDF010000005.1	77140	78357
GCA_015666945.1	GCA_015666945.1_02081	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JADPDF010000007.1	42577	44496
GCA_025558665.1	GCA_025558665.1_00086	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094728.1	90024	91313
GCA_025558665.1	GCA_025558665.1_00089	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP094728.1	93491	93838
GCA_025558665.1	GCA_025558665.1_00169	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP094728.1	191775	192203
GCA_025558665.1	GCA_025558665.1_00889	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP094728.1	931788	932633
GCA_025558665.1	GCA_025558665.1_00890	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP094728.1	932740	934497
GCA_025558665.1	GCA_025558665.1_00891	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP094728.1	934487	934867
GCA_025558665.1	GCA_025558665.1_01372	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP094728.1	1429034	1429519
GCA_927911715.1	GCA_927911715.1_01645	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAKMQR010000135.1	4406	5602
GCA_927911715.1	GCA_927911715.1_02716	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	392	321	93.15	100.00	299	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAKMQR010000232.1	4	1182
GCA_001697865.1	GCA_001697865.1_00634	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.82	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016672.1	626354	627880
GCA_001697865.1	GCA_001697865.1_00828	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016672.1	829359	830927
GCA_001697865.1	GCA_001697865.1_00830	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016672.1	831752	832384
GCA_001697865.1	GCA_001697865.1_00831	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016672.1	832788	834026
GCA_001697865.1	GCA_001697865.1_00952	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016672.1	969387	970292
GCA_001697865.1	GCA_001697865.1_01701	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016672.1	1730937	1732316
GCA_022689645.1	GCA_022689645.1_00371	fosB	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_032488468.1	fosfomycin resistance bacillithiol transferase FosB	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	JALCWY010000014.1	24642	25061
GCA_022689645.1	GCA_022689645.1_00507	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCWY010000018.1	11285	12751
GCA_022689645.1	GCA_022689645.1_00508	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JALCWY010000018.1	12850	13749
GCA_022689645.1	GCA_022689645.1_00510	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCWY010000018.1	15048	15608
GCA_022689645.1	GCA_022689645.1_00511	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCWY010000018.1	15792	17336
GCA_022689645.1	GCA_022689645.1_00992	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	JALCWY010000025.1	645	2213
GCA_022689645.1	GCA_022689645.1_01557	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWY010000004.1	30178	31470
GCA_022689645.1	GCA_022689645.1_01561	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWY010000004.1	35153	35500
GCA_001553165.1	GCA_001553165.1_00801	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	KQ960376.1	116602	118527
GCA_020023775.1	GCA_020023775.1_00699	vat(E)	streptogramin A O-acetyltransferase Vat(E)	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	EXACTP	214	214	100.00	100.00	214	WP_002328813.1	streptogramin A O-acetyltransferase Vat(E)	NF000020.1	streptogramin A O-acetyltransferase Vat(E)	CP080622.1	629005	629649
GCA_003182075.1	GCA_003182075.1_01577	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	77.24	51.58	95	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	QGTH01000020.1	6563	6928
GCA_024125345.1	GCA_024125345.1_00273	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.28	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAMXVJ010000001.1	297323	299248
GCA_024125345.1	GCA_024125345.1_01983	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JAMXVJ010000001.1	2431105	2431617
GCA_024125345.1	GCA_024125345.1_01984	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JAMXVJ010000001.1	2431642	2432847
GCA_020162195.1	GCA_020162195.1_00013	blaOXA	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	274	274	100.00	96.35	274	WP_140423313.1	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-644	NF000417.2	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	CP083947.1	15113	15937
GCA_020162195.1	GCA_020162195.1_00653	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	388	390	99.49	68.04	388	WP_057991970.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP083947.1	672472	673638
GCA_020162195.1	GCA_020162195.1_02217	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	96.98	76.10	385	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP083947.1	2216913	2218133
GCA_021270905.1	GCA_021270905.1_00008	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAAWEN010000001.1	6792	8432
GCA_021270905.1	GCA_021270905.1_00027	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAAWEN010000001.1	21543	22109
GCA_021270905.1	GCA_021270905.1_00028	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAAWEN010000001.1	22287	23831
GCA_021270905.1	GCA_021270905.1_00057	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	182	188	96.81	99.45	182	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAAWEN010000001.1	47350	47898
GCA_021270905.1	GCA_021270905.1_00058	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAAWEN010000001.1	48076	49620
GCA_021270905.1	GCA_021270905.1_00161	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.55	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAAWEN010000002.1	73761	75053
GCA_021270905.1	GCA_021270905.1_00284	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAAWEN010000002.1	195062	197068
GCA_021270905.1	GCA_021270905.1_00610	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAAWEN010000002.1	511338	512183
GCA_021270905.1	GCA_021270905.1_00611	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAAWEN010000002.1	512290	514047
GCA_021270905.1	GCA_021270905.1_00612	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAAWEN010000002.1	514037	514417
GCA_021270905.1	GCA_021270905.1_02739	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	417	429	97.20	78.66	417	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAAWEN010000003.1	70256	71509
GCA_000373085.1	GCA_000373085.1_00003	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.86	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	KB890319.1	3761	5686
GCA_000373085.1	GCA_000373085.1_02346	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.86	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	KB890345.1	37068	38993
GCA_000373085.1	GCA_000373085.1_03102	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	KB890365.1	546	1511
GCA_000373085.1	GCA_000373085.1_03118	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	PARTIALP	150	266	56.39	100.00	150	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NA	NA	KB890366.1	515	967
GCA_000373085.1	GCA_000373085.1_03119	blaOXA	OXA-1327 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	285	285	100.00	82.46	285	WP_077564355.1	OXA-1327 family class D beta-lactamase	NF047782.1	OXA-1327 family class D beta-lactamase	KB890366.1	1175	2032
GCA_000373085.1	GCA_000373085.1_03120	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	KB890366.1	2210	3073
GCA_000373085.1	GCA_000373085.1_03887	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	KB890408.1	69533	70492
GCA_023375105.1	GCA_023375105.1_00965	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP084116.1	1101055	1102974
GCA_001073735.1	GCA_001073735.1_00503	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JUYP01000051.1	69106	69534
GCA_001073735.1	GCA_001073735.1_00935	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JUYP01000077.1	9509	10726
GCA_001073735.1	GCA_001073735.1_00936	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JUYP01000077.1	10846	12309
GCA_001073735.1	GCA_001073735.1_01410	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.74	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JUYP01000103.1	15186	16910
GCA_001073735.1	GCA_001073735.1_01411	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JUYP01000103.1	16912	18648
GCA_007786365.1	GCA_007786365.1_01023	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VMTX01000020.1	983	2407
GCA_002208805.2	GCA_002208805.2_00560	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP022096.2	584060	584791
GCA_002208805.2	GCA_002208805.2_00561	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP022096.2	584917	585699
GCA_002208805.2	GCA_002208805.2_01585	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP022096.2	1638550	1639332
GCA_002208805.2	GCA_002208805.2_01586	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP022096.2	1639458	1640189
GCA_002208805.2	GCA_002208805.2_01698	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	52.01	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP022096.2	1765909	1766961
GCA_024539775.1	GCA_024539775.1_00069	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.55	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFJMC010000001.1	69343	70764
GCA_024539775.1	GCA_024539775.1_00968	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAFJMC010000031.1	832	1686
GCA_024539775.1	GCA_024539775.1_01348	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JAFJMC010000040.1	113	559
GCA_024539775.1	GCA_024539775.1_01358	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	98.99	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JAFJMC010000042.1	3596	5377
GCA_024539775.1	GCA_024539775.1_01899	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JAFJMC010000063.1	486	1289
GCA_024539775.1	GCA_024539775.1_01900	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAFJMC010000063.1	1289	2125
GCA_024539775.1	GCA_024539775.1_01902	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAFJMC010000063.1	2329	3504
GCA_024539775.1	GCA_024539775.1_02049	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAFJMC010000076.1	186	1001
GCA_025370135.1	GCA_025370135.1_00013	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JANTNV010000002.1	9356	9973
GCA_025370135.1	GCA_025370135.1_00027	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JANTNV010000005.1	1512	2891
GCA_025370135.1	GCA_025370135.1_00077	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JANTNV010000001.1	56931	58220
GCA_025370135.1	GCA_025370135.1_00081	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANTNV010000001.1	60386	60733
GCA_025370135.1	GCA_025370135.1_00203	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JANTNV010000001.1	190763	191836
GCA_025370135.1	GCA_025370135.1_00927	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.16	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JANTNV010000001.1	915631	916920
GCA_943912545.1	GCA_943912545.1_01752	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	520	513	100.00	89.47	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CALTUA010000028.1	2622	4184
GCA_943912545.1	GCA_943912545.1_02209	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CALTUA010000062.1	3159	4601
GCA_009378825.1	GCA_009378825.1_00604	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCS01000002.1	102855	103796
GCA_024295965.1	GCA_024295965.1_00272	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	89.44	61.42	127	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPA010000001.1	255060	255488
GCA_024295965.1	GCA_024295965.1_00277	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPA010000001.1	258459	259676
GCA_024295965.1	GCA_024295965.1_00278	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPA010000001.1	259796	261259
GCA_024295965.1	GCA_024295965.1_00283	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPA010000001.1	263209	263637
GCA_024295965.1	GCA_024295965.1_01747	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JANCPA010000006.1	91200	93119
GCA_015291305.1	GCA_015291305.1_05347	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	272	99.26	69.26	270	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP030036.1	5649818	5650627
GCA_015291305.1	GCA_015291305.1_06816	blaBJP	BJP family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	295	294	99.66	84.98	293	WP_011088970.1	BJP family subclass B3 metallo-beta-lactamase	NF012140.0	BJP family subclass B3 metallo-beta-lactamase	CP030036.1	7168585	7169472
GCA_015291305.1	GCA_015291305.1_06873	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	305	97.38	53.87	297	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP030036.1	7237011	7237910
GCA_003966585.1	GCA_003966585.1_00044	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	AP018585.1	44742	46748
GCA_003966585.1	GCA_003966585.1_00158	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	69.06	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AP018585.1	174162	174599
GCA_003966585.1	GCA_003966585.1_00226	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AP018585.1	260239	261312
GCA_003966585.1	GCA_003966585.1_00990	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AP018585.1	1021404	1022249
GCA_003966585.1	GCA_003966585.1_00991	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AP018585.1	1022356	1024113
GCA_003966585.1	GCA_003966585.1_00992	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AP018585.1	1024103	1024483
GCA_003966585.1	GCA_003966585.1_00994	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP018585.1	1024788	1026077
GCA_003966585.1	GCA_003966585.1_01102	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	AP018585.1	1110654	1112093
GCA_009663945.1	GCA_009663945.1_00065	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	WJUO01000010.1	13508	15052
GCA_009663945.1	GCA_009663945.1_00066	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	WJUO01000010.1	15236	15796
GCA_009663945.1	GCA_009663945.1_00093	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	WJUO01000017.1	515	1249
GCA_009663945.1	GCA_009663945.1_00095	fosB	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_032488468.1	fosfomycin resistance bacillithiol transferase FosB	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	WJUO01000018.1	98	517
GCA_009663945.1	GCA_009663945.1_01763	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	354	350	98.86	53.03	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	WJUO01000004.1	555180	556244
GCA_009663945.1	GCA_009663945.1_01852	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	WJUO01000005.1	90098	90445
GCA_009663945.1	GCA_009663945.1_01855	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	WJUO01000005.1	92613	93902
GCA_009663945.1	GCA_009663945.1_02234	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	WJUO01000009.1	2715	3095
GCA_009663945.1	GCA_009663945.1_02235	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	WJUO01000009.1	3085	4842
GCA_009663945.1	GCA_009663945.1_02236	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	WJUO01000009.1	4949	5794
GCA_900478275.1	GCA_900478275.1_01233	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LS483480.1	1229909	1231303
GCA_015679815.1	GCA_015679815.1_00448	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030819.1	457705	459084
GCA_015679815.1	GCA_015679815.1_01202	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP030819.1	1220997	1221902
GCA_015679815.1	GCA_015679815.1_01330	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030819.1	1357110	1358348
GCA_015679815.1	GCA_015679815.1_01332	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	215	210	74.29	98.72	156	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030819.1	1359839	1360486
GCA_015679815.1	GCA_015679815.1_01334	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030819.1	1361297	1362865
GCA_015679815.1	GCA_015679815.1_01526	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030819.1	1564965	1566491
GCA_002578835.1	GCA_002578835.1_00994	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NBIQ01000002.1	24571	24981
GCA_000568595.1	GCA_000568595.1_03027	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	277	272	99.26	59.35	278	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	AVBK01000021.1	89900	90733
GCA_000568595.1	GCA_000568595.1_04349	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	754	631	85.90	42.47	551	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AVBK01000045.1	28170	30434
GCA_019703675.1	GCA_019703675.1_01200	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	98.06	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018777.1	1197427	1198821
GCA_019703675.1	GCA_019703675.1_01566	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.29	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AP018777.1	1537687	1539327
GCA_005221345.1	GCA_005221345.1_00623	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	274	269	92.57	52.11	261	WP_338424127.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP039897.1	631646	632470
GCA_005221345.1	GCA_005221345.1_01979	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	151	146	94.52	55.80	138	WP_044030410.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP039897.1	1966080	1966535
GCA_005221345.1	GCA_005221345.1_02923	catB1	type B-1 chloramphenicol O-acetyltransferase CatB1	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	209	209	100.00	98.09	209	WP_010974114.1	type B-1 chloramphenicol O-acetyltransferase CatB1	NF000490.1	type B chloramphenicol O-acetyltransferase	CP039898.1	84708	85337
GCA_005221345.1	GCA_005221345.1_04729	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	385	396	96.97	51.17	385	WP_280147732.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP039898.1	2092385	2093542
GCA_005221345.1	GCA_005221345.1_04886	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	145	147	98.64	56.55	145	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP039899.1	16824	17261
GCA_005221345.1	GCA_005221345.1_05330	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	313	147	92.52	55.15	136	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP039900.1	29632	30573
GCA_000477875.1	GCA_000477875.1_00127	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515702.1	130311	131165
GCA_000224635.1	GCA_000224635.1_01914	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	249	93.57	46.61	236	WP_197749418.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	JH114302.1	617142	617918
GCA_018381755.1	GCA_018381755.1_01618	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	639	99.69	99.84	637	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAGZRG010000007.1	64800	66722
GCA_012976625.1	GCA_012976625.1_01599	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	99.84	99.22	638	WP_063856415.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JABCUR010000007.1	12588	14507
GCA_012976625.1	GCA_012976625.1_02349	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JABCUR010000026.1	281	1135
GCA_001956755.1	GCA_001956755.1_00101	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP019117.1	114859	116217
GCA_001956755.1	GCA_001956755.1_00364	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP019117.1	388170	389525
GCA_001956755.1	GCA_001956755.1_00860	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	524	524	100.00	99.62	524	WP_063856936.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP019117.1	881911	883485
GCA_001956755.1	GCA_001956755.1_01770	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP019117.1	1849549	1850841
GCA_001956755.1	GCA_001956755.1_01827	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP019117.1	1898548	1899303
GCA_001956755.1	GCA_001956755.1_01828	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP019117.1	1899342	1900127
GCA_001956755.1	GCA_001956755.1_01829	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP019117.1	1900281	1901009
GCA_001956755.1	GCA_001956755.1_01830	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.65	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP019117.1	1901044	1901763
GCA_001956755.1	GCA_001956755.1_02073	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP019117.1	2085856	2085990
GCA_001956755.1	GCA_001956755.1_02225	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	96.67	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP019117.1	2239300	2240742
GCA_001956755.1	GCA_001956755.1_02484	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP019117.1	2479780	2480745
GCA_001956755.1	GCA_001956755.1_02485	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP019117.1	2481295	2482242
GCA_001956755.1	GCA_001956755.1_02486	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP019117.1	2482244	2483221
GCA_001956755.1	GCA_001956755.1_02697	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP019117.1	2711975	2713504
GCA_001956755.1	GCA_001956755.1_02732	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	98.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP019117.1	2757162	2758214
GCA_003031285.1	GCA_003031285.1_00218	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.02	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP023561.1	236713	238242
GCA_003031285.1	GCA_003031285.1_00253	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP023561.1	281576	282628
GCA_003031285.1	GCA_003031285.1_00386	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP023561.1	428433	429791
GCA_003031285.1	GCA_003031285.1_00582	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP023561.1	654510	655865
GCA_003031285.1	GCA_003031285.1_00620	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP023561.1	689040	689651
GCA_003031285.1	GCA_003031285.1_01837	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP023561.1	1926954	1927706
GCA_003031285.1	GCA_003031285.1_02010	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP023561.1	2120291	2121583
GCA_003031285.1	GCA_003031285.1_02054	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP023561.1	2158821	2159537
GCA_003031285.1	GCA_003031285.1_02057	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP023561.1	2161312	2162034
GCA_003031285.1	GCA_003031285.1_02058	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP023561.1	2162159	2162866
GCA_003031285.1	GCA_003031285.1_02068	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP023561.1	2174515	2175498
GCA_003031285.1	GCA_003031285.1_02069	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP023561.1	2175500	2176420
GCA_003031285.1	GCA_003031285.1_02208	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.83	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP023561.1	2288227	2288607
GCA_003031285.1	GCA_003031285.1_02209	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.40	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP023561.1	2288597	2290354
GCA_003031285.1	GCA_003031285.1_02210	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP023561.1	2290461	2291306
GCA_003031285.1	GCA_003031285.1_02233	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP023561.1	2312472	2312822
GCA_003031285.1	GCA_003031285.1_02237	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	CP023561.1	2314319	2314810
GCA_003031285.1	GCA_003031285.1_02241	sep	staphylococcal enterotoxin type P	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	260	260	100.00	100.00	260	ADC38120.1	staphylococcal enterotoxin type P	NA	NA	CP023561.1	2316613	2317395
GCA_003031285.1	GCA_003031285.1_02314	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP023561.1	2372893	2373027
GCA_003031285.1	GCA_003031285.1_02462	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.79	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP023561.1	2525400	2526842
GCA_003031285.1	GCA_003031285.1_02638	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP023561.1	2678654	2679073
GCA_003031285.1	GCA_003031285.1_02726	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP023561.1	2768190	2769155
GCA_003031285.1	GCA_003031285.1_02727	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP023561.1	2769723	2770670
GCA_003031285.1	GCA_003031285.1_02728	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP023561.1	2770672	2771649
GCA_003031285.1	GCA_003031285.1_02732	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP023562.1	1377	1757
GCA_003031285.1	GCA_003031285.1_02733	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP023562.1	1747	3504
GCA_003031285.1	GCA_003031285.1_02734	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733289.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP023562.1	3611	4456
GCA_025151215.1	GCA_025151215.1_01901	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP102286.1	2176027	2177952
GCA_001812055.1	GCA_001812055.1_00067	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV807516.1	33241	35160
GCA_001281505.1	GCA_001281505.1_00562	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP012390.1	613161	614015
GCA_022689335.1	GCA_022689335.1_00478	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXN010000001.1	287297	287716
GCA_022689335.1	GCA_022689335.1_00886	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXN010000002.1	175578	176870
GCA_022689335.1	GCA_022689335.1_01022	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXN010000002.1	330521	331594
GCA_963394965.1	GCA_963394965.1_01554	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	PARTIALP	327	533	61.35	96.94	327	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CAUJPW010000021.1	32191	33174
GCA_003942875.1	GCA_003942875.1_00551	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RMVK01000002.1	133662	134879
GCA_003942875.1	GCA_003942875.1_00552	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RMVK01000002.1	134999	136462
GCA_003397745.1	GCA_003397745.1_00695	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	QJVA01000001.1	895069	896547
GCA_015700135.1	GCA_015700135.1_00546	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	347	399	86.97	98.27	347	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JACSYT010000018.1	11875	12918
GCA_001807105.1	GCA_001807105.1_01271	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV787425.1	194989	196410
GCA_001807105.1	GCA_001807105.1_01275	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV787425.1	198132	198986
GCA_001807105.1	GCA_001807105.1_01937	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV787446.1	3527	5308
GCA_000210955.1	GCA_000210955.1_00948	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	371	371	100.00	100.00	371	EHE72460.1	multidrug efflux MFS transporter PmrA	NA	NA	FQ312027.1	884067	885182
GCA_013276595.1	GCA_013276595.1_00021	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	VMLH01000001.1	21064	21801
GCA_013276595.1	GCA_013276595.1_00022	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMLH01000001.1	22908	24827
GCA_013276595.1	GCA_013276595.1_00114	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	VMLH01000104.1	3796	4446
GCA_013276595.1	GCA_013276595.1_01997	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	362	399	80.20	98.44	320	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMLH01000088.1	13630	14718
GCA_000007645.1	GCA_000007645.1_00081	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	AE015929.1	84875	85210
GCA_000007645.1	GCA_000007645.1_00082	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AE015929.1	85268	86911
GCA_000007645.1	GCA_000007645.1_00083	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	AE015929.1	86993	87643
GCA_000007645.1	GCA_000007645.1_00128	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AE015929.1	128725	130014
GCA_000007645.1	GCA_000007645.1_00131	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AE015929.1	132192	132539
GCA_000007645.1	GCA_000007645.1_00212	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	AE015929.1	221537	221965
GCA_000007645.1	GCA_000007645.1_01620	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AE015929.1	1661974	1662354
GCA_000007645.1	GCA_000007645.1_01621	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.21	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AE015929.1	1662344	1664101
GCA_000007645.1	GCA_000007645.1_01622	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AE015929.1	1664208	1665053
GCA_000007645.1	GCA_000007645.1_02439	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	AE015930.1	36	1415
GCA_000007645.1	GCA_000007645.1_02485	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AE015934.1	7261	8106
GCA_000007645.1	GCA_000007645.1_02486	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.15	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AE015934.1	8213	9970
GCA_000007645.1	GCA_000007645.1_02487	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AE015934.1	9960	10340
GCA_027682085.1	GCA_027682085.1_00495	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.43	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAQDAI010000011.1	27644	29122
GCA_001837775.1	GCA_001837775.1_01954	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV834040.1	207917	209338
GCA_002835695.1	GCA_002835695.1_01979	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	286	325	97.54	39.94	318	WP_030892446.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	PJAF01000006.1	83395	84255
GCA_900475535.1	GCA_900475535.1_01272	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LS483392.1	1244223	1245617
GCA_902373365.1	GCA_902373365.1_02059	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	229	232	99.14	67.83	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CABKLY020000016.1	42931	43620
GCA_902373365.1	GCA_902373365.1_03623	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	588	585	99.32	32.49	591	WP_000952923.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	CABKLY020000048.1	4168	5934
GCA_001071805.1	GCA_001071805.1_00677	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVPQ01000053.1	72087	73727
GCA_000214455.2	GCA_000214455.2_00245	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AFIH01000001.1	244676	245893
GCA_000214455.2	GCA_000214455.2_00246	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	PARTIALP	261	487	52.16	99.61	254	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NA	NA	AFIH01000001.1	246013	246798
GCA_000214455.2	GCA_000214455.2_00371	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	PARTIALP	460	492	87.20	92.07	429	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NA	NA	AFIH01000001.1	357450	358832
GCA_019391735.1	GCA_019391735.1_00188	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXQW010000012.1	62796	63986
GCA_019391735.1	GCA_019391735.1_00256	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHXQW010000013.1	78843	79169
GCA_019391735.1	GCA_019391735.1_01859	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXQW010000046.1	861	1826
GCA_000204475.1	GCA_000204475.1_00383	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	GL883609.1	372263	372691
GCA_030676835.1	GCA_030676835.1_00772	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAUUIM010000001.1	165046	166965
GCA_030676835.1	GCA_030676835.1_01325	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.18	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAUUIM010000002.1	113180	113911
GCA_020740045.1	GCA_020740045.1_00022	fosB	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_032488468.1	fosfomycin resistance bacillithiol transferase FosB	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	JAJGBD010000010.1	15922	16341
GCA_020740045.1	GCA_020740045.1_01701	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJGBD010000003.1	130777	132066
GCA_020740045.1	GCA_020740045.1_01704	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAJGBD010000003.1	134234	134581
GCA_020740045.1	GCA_020740045.1_02228	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.42	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAJGBD010000009.1	6606	8150
GCA_020740045.1	GCA_020740045.1_02229	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAJGBD010000009.1	8333	8893
GCA_020740045.1	GCA_020740045.1_02232	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAJGBD010000009.1	10684	11064
GCA_020740045.1	GCA_020740045.1_02233	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAJGBD010000009.1	11054	12811
GCA_020740045.1	GCA_020740045.1_02234	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAJGBD010000009.1	12918	13763
GCA_020740045.1	GCA_020740045.1_02235	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAJGBD010000009.1	14503	15402
GCA_020740045.1	GCA_020740045.1_02236	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAJGBD010000009.1	15501	16967
GCA_901873415.1	GCA_901873415.1_01400	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CABFLE010000022.1	122737	123954
GCA_901873415.1	GCA_901873415.1_01401	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CABFLE010000022.1	124074	125537
GCA_901873415.1	GCA_901873415.1_01405	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABFLE010000022.1	127263	129182
GCA_002966735.1	GCA_002966735.1_01324	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP020014.1	1326312	1327706
GCA_017655905.1	GCA_017655905.1_00533	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	44.80	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040423.1	504212	504586
GCA_017655905.1	GCA_017655905.1_00689	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	246	244	99.59	87.35	245	WP_011117197.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP040423.1	665149	665889
GCA_017655905.1	GCA_017655905.1_01412	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP040423.1	1428014	1428418
GCA_017655905.1	GCA_017655905.1_01413	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP040423.1	1428635	1429378
GCA_000021865.1	GCA_000021865.1_02084	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	153	147	97.28	46.53	144	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP001312.1	2219754	2220215
GCA_009717545.1	GCA_009717545.1_00476	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYU01000001.1	455020	456237
GCA_009717545.1	GCA_009717545.1_00477	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYU01000001.1	456357	457820
GCA_009717545.1	GCA_009717545.1_01247	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.97	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMYU01000003.1	9936	11672
GCA_009717545.1	GCA_009717545.1_01248	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.64	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMYU01000003.1	11674	13398
GCA_030844955.1	GCA_030844955.1_01917	tet(65)	tetracycline efflux MFS transporter Tet(65)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	384	383	100.00	99.22	383	WP_152609570.1	tetracycline efflux MFS transporter Tet(65)	NF045684.1	tetracycline efflux MFS transporter Tet(65)	JASNMJ010000001.1	2054457	2055611
GCA_030844955.1	GCA_030844955.1_02588	tet(Z)	tetracycline efflux MFS transporter Tet(Z)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	416	416	100.00	99.76	416	WP_064190967.1	tetracycline efflux MFS transporter Tet(Z)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	JASNMJ010000001.1	2753099	2754349
GCA_014138885.1	GCA_014138885.1_00320	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	482	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACJIK010000001.1	372351	373799
GCA_003437975.1	GCA_003437975.1_00111	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.61	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	QSST01000001.1	94647	96371
GCA_003437975.1	GCA_003437975.1_00112	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.32	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	QSST01000001.1	96373	98109
GCA_003437975.1	GCA_003437975.1_00883	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	QSST01000021.1	31322	32539
GCA_003437975.1	GCA_003437975.1_00884	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	QSST01000021.1	32659	34122
GCA_006540205.1	GCA_006540205.1_00478	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	228	232	98.71	71.74	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	BJOM01000001.1	483103	483789
GCA_006540205.1	GCA_006540205.1_01255	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	80.69	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	BJOM01000004.1	28405	29883
GCA_006540205.1	GCA_006540205.1_02883	msr	Msr family ABC-F type ribosomal protection protein	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	482	485	99.18	72.35	481	WP_101035417.1	Msr family ABC-F type ribosomal protection protein	NF000168.2	Msr family ABC-F type ribosomal protection protein	BJOM01000013.1	39608	41056
GCA_006540205.1	GCA_006540205.1_02980	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	141	142	97.18	77.54	138	WP_204376221.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	BJOM01000013.1	118528	118953
GCA_006540205.1	GCA_006540205.1_03738	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	215	100.00	68.84	215	WP_035203840.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	BJOM01000021.1	22156	22803
GCA_006540205.1	GCA_006540205.1_04575	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	148	97.30	55.56	144	WP_128470137.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	BJOM01000035.1	7578	8012
GCA_003625895.1	GCA_003625895.1_01448	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZIC01000006.1	102980	103921
GCA_017167295.1	GCA_017167295.1_01874	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAFDQE010000003.1	4498	4899
GCA_017167295.1	GCA_017167295.1_01875	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFDQE010000003.1	4917	6206
GCA_017167295.1	GCA_017167295.1_01986	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAFDQE010000003.1	147808	148881
GCA_017167295.1	GCA_017167295.1_02231	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFDQE010000005.1	60473	61762
GCA_001647875.1	GCA_001647875.1_00595	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP015432.1	524103	525743
GCA_001647875.1	GCA_001647875.1_00635	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089068.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CP015432.1	554375	555580
GCA_001647875.1	GCA_001647875.1_00642	catA2	type A-2 chloramphenicol O-acetyltransferase CatII	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	213	213	100.00	100.00	213	WP_011751353.1	type A-2 chloramphenicol O-acetyltransferase CatII	NF000491.1	type A chloramphenicol O-acetyltransferase	CP015432.1	560267	560908
GCA_001553215.1	GCA_001553215.1_00801	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	KQ960438.1	116602	118527
GCA_000163435.1	GCA_000163435.1_00012	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	GG700820.1	985	2160
GCA_000163435.1	GCA_000163435.1_00583	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	479	513	93.37	96.87	479	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	GG700817.1	297800	299239
GCA_000163435.1	GCA_000163435.1_01234	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	GG700815.1	132475	134256
GCA_000163435.1	GCA_000163435.1_01418	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.13	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	GG700814.1	200566	201420
GCA_000163435.1	GCA_000163435.1_01423	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GG700814.1	205880	207301
GCA_025166855.1	GCA_025166855.1_00948	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	69.57	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAMCCS010000001.1	942941	943360
GCA_025166855.1	GCA_025166855.1_01082	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAMCCS010000014.1	2796	3110
GCA_025166855.1	GCA_025166855.1_01083	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAMCCS010000014.1	3110	4399
GCA_025166855.1	GCA_025166855.1_01389	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAMCCS010000002.1	297165	298457
GCA_025166855.1	GCA_025166855.1_01564	qacG	quaternary ammonium compound efflux SMR transporter QacG	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_015740450.1	quaternary ammonium compound efflux SMR transporter QacG	NF000277.1	quaternary ammonium compound efflux SMR transporter QacG	JAMCCS010000022.1	507	830
GCA_001558775.1	GCA_001558775.1_00914	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP014022.1	927312	927731
GCA_001558775.1	GCA_001558775.1_01428	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP014022.1	1455544	1456617
GCA_001558775.1	GCA_001558775.1_01561	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP014022.1	1599203	1600495
GCA_001558775.1	GCA_001558775.1_01708	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP014022.1	1747219	1748064
GCA_001558775.1	GCA_001558775.1_01709	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP014022.1	1748171	1749928
GCA_001558775.1	GCA_001558775.1_01710	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP014022.1	1749918	1750298
GCA_000154525.1	GCA_000154525.1_02121	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	DS499673.1	582992	583318
GCA_000154525.1	GCA_000154525.1_02211	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	DS499672.1	86854	88779
GCA_000154525.1	GCA_000154525.1_02528	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	300	296	100.00	63.85	296	WP_005827792.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	DS499672.1	426935	427837
GCA_021595565.1	GCA_021595565.1_00653	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JACSYJ010000001.1	654694	655911
GCA_021595565.1	GCA_021595565.1_00654	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JACSYJ010000001.1	656031	657494
GCA_003989225.1	GCA_003989225.1_02065	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RBLZ01000009.1	4570	5424
GCA_905371445.1	GCA_905371445.1_01954	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAJPLC010000043.1	8192	9382
GCA_016755635.1	GCA_016755635.1_00359	copP	copper-binding metallochaperone CopP	plus	STRESS	METAL	COPPER	COPPER	BLASTP	66	66	100.00	92.42	66	AAD05936.1	copper-binding metallochaperone CopP	NF033781.1	copper-binding metallochaperone CopP	CP051500.1	369277	369477
GCA_000466785.3	GCA_000466785.3_01187	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	120	121	100.00	65.29	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP011536.1	1138953	1139315
GCA_947087685.1	GCA_947087685.1_00991	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAMUDH010000004.1	166144	168063
GCA_947087685.1	GCA_947087685.1_01221	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.18	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CAMUDH010000007.1	15253	15984
GCA_020682785.1	GCA_020682785.1_00134	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.54	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHMMV010000001.1	144368	145660
GCA_020682785.1	GCA_020682785.1_01233	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHMMV010000003.1	5084	5503
GCA_020682785.1	GCA_020682785.1_01889	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHMMV010000005.1	146112	147185
GCA_000613705.1	GCA_000613705.1_01013	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	BAJM01000022.1	4459	6384
GCA_000613705.1	GCA_000613705.1_01022	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	BAJM01000022.1	19543	20508
GCA_007786415.1	GCA_007786415.1_01231	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	VNKN01000025.1	515	1318
GCA_007786415.1	GCA_007786415.1_01232	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	VNKN01000025.1	1318	2154
GCA_007786415.1	GCA_007786415.1_01233	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VNKN01000025.1	2358	3533
GCA_000009625.1	GCA_000009625.1_00750	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	250	264	89.77	55.00	240	WP_032490761.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	BA000012.4	741372	742124
GCA_000009625.1	GCA_000009625.1_02133	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	263	266	97.74	57.69	260	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	BA000012.4	2168653	2169444
GCA_000009625.1	GCA_000009625.1_02632	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	154	92.86	60.84	143	WP_015860243.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	BA000012.4	2691005	2691424
GCA_005890385.1	GCA_005890385.1_01810	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	347	399	86.97	98.27	347	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQR01000066.1	23435	24478
GCA_028464905.1	GCA_028464905.1_01021	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.55	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAQPQT010000002.1	166897	168186
GCA_028464905.1	GCA_028464905.1_02231	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAQPQT010000011.1	3671	4051
GCA_028464905.1	GCA_028464905.1_02232	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAQPQT010000011.1	4041	5798
GCA_028464905.1	GCA_028464905.1_02233	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAQPQT010000011.1	5905	6750
GCA_028464905.1	GCA_028464905.1_02235	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	105	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAQPQT010000011.1	7835	8152
GCA_028464905.1	GCA_028464905.1_02236	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAQPQT010000011.1	8149	9438
GCA_028464905.1	GCA_028464905.1_02237	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAQPQT010000011.1	9456	9851
GCA_963392985.1	GCA_963392985.1_00127	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.55	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJNY010000001.1	121565	122944
GCA_963392985.1	GCA_963392985.1_00876	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJNY010000006.1	53966	55492
GCA_963392985.1	GCA_963392985.1_00999	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJNY010000007.1	42356	43594
GCA_963392985.1	GCA_963392985.1_01000	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJNY010000007.1	43611	44474
GCA_963392985.1	GCA_963392985.1_01829	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJNY010000021.1	19398	20303
GCA_003028315.1	GCA_003028315.1_01321	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP028150.1	1404815	1406194
GCA_000615325.1	GCA_000615325.1_01939	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.44	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	BALV01000005.1	16684	18798
GCA_030232165.1	GCA_030232165.1_01544	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JASPJF010000034.1	5827	6273
GCA_030232165.1	GCA_030232165.1_01546	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJF010000034.1	7073	7927
GCA_030232165.1	GCA_030232165.1_01547	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JASPJF010000034.1	8190	9731
GCA_030232165.1	GCA_030232165.1_01905	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASPJF010000046.1	2403	4322
GCA_030232165.1	GCA_030232165.1_01914	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPJF010000047.1	3225	4667
GCA_030232165.1	GCA_030232165.1_02091	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASPJF010000051.1	1919	3700
GCA_023508875.1	GCA_023508875.1_00024	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP048713.1	26866	27939
GCA_023508875.1	GCA_023508875.1_00036	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP048713.1	38370	40376
GCA_023508875.1	GCA_023508875.1_00037	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP048713.1	40476	41462
GCA_023508875.1	GCA_023508875.1_00204	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP048713.1	222750	224042
GCA_023508875.1	GCA_023508875.1_00352	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP048713.1	370746	371591
GCA_023508875.1	GCA_023508875.1_00353	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP048713.1	371698	373455
GCA_023508875.1	GCA_023508875.1_00354	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP048713.1	373445	373825
GCA_023508875.1	GCA_023508875.1_02115	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP048713.1	2123924	2124343
GCA_900478325.1	GCA_900478325.1_01729	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	463	464	100.00	98.28	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LS483486.1	1663847	1665238
GCA_001179785.1	GCA_001179785.1_00993	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CVUF01000007.1	30436	31725
GCA_001179785.1	GCA_001179785.1_00994	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CVUF01000007.1	31743	32144
GCA_001179785.1	GCA_001179785.1_01203	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CVUF01000011.1	1225	2070
GCA_001179785.1	GCA_001179785.1_01204	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CVUF01000011.1	2177	3934
GCA_001179785.1	GCA_001179785.1_01205	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CVUF01000011.1	3924	4304
GCA_001179785.1	GCA_001179785.1_01530	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CVUF01000014.1	12907	14913
GCA_001179785.1	GCA_001179785.1_01552	aph(2)-Ia	aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	HMM	349	479	72.44	99.14	347	WP_001028144.1	aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CVUF01000018.1	793	1842
GCA_001179785.1	GCA_001179785.1_02161	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CVUF01000028.1	111428	112501
GCA_001179785.1	GCA_001179785.1_02327	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CVUF01000030.1	55392	56681
GCA_019334765.1	GCA_019334765.1_01042	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP079820.1	1103028	1104668
GCA_019334765.1	GCA_019334765.1_01289	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP079820.1	1355366	1357285
GCA_018370865.1	GCA_018370865.1_01212	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAGYZO010000013.1	10743	11153
GCA_018370865.1	GCA_018370865.1_02176	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAGYZO010000002.1	284640	285041
GCA_904425455.1	GCA_904425455.1_00446	ampC-Ecan	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	381	381	100.00	98.95	381	WP_006178946.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	NF041666.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	LR881936.1	446114	447259
GCA_904425455.1	GCA_904425455.1_00620	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	95.74	141	WP_038415208.1	fosfomycin resistance glutathione transferase FosA	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	LR881936.1	628542	628967
GCA_904425455.1	GCA_904425455.1_01476	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	642	725	88.69	93.93	643	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	LR881936.1	1512703	1514631
GCA_904425455.1	GCA_904425455.1_01479	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	90.62	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	LR881936.1	1517293	1520952
GCA_904425455.1	GCA_904425455.1_01480	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.45	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	LR881936.1	1521094	1522209
GCA_904425455.1	GCA_904425455.1_01518	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	100.00	77.30	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	LR881936.1	1567172	1567603
GCA_904425455.1	GCA_904425455.1_02081	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	122	102	100.00	67.74	124	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	LR881936.1	2114141	2114509
GCA_904425455.1	GCA_904425455.1_04543	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	88.81	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	LR881936.1	4676882	4677775
GCA_001956655.2	GCA_001956655.2_00580	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP018842.1	566954	567595
GCA_001956655.2	GCA_001956655.2_02366	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP018842.1	2303721	2305010
GCA_001956655.2	GCA_001956655.2_02369	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP018842.1	2307188	2307535
GCA_001956655.2	GCA_001956655.2_02457	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	95.77	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP018842.1	2407822	2408250
GCA_001956655.2	GCA_001956655.2_02624	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	504	514	98.05	99.01	504	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP018843.1	10079	11593
GCA_001956655.2	GCA_001956655.2_02625	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.39	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP018843.1	11807	12367
GCA_000144085.1	GCA_000144085.1_02090	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	GL383191.1	7172	7594
GCA_900109865.1	GCA_900109865.1_00010	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.96	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FOBP01000029.1	4723	6366
GCA_900109865.1	GCA_900109865.1_00869	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	FOBP01000030.1	1781	3787
GCA_900109865.1	GCA_900109865.1_00870	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	FOBP01000030.1	3887	5644
GCA_900109865.1	GCA_900109865.1_00871	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	FOBP01000030.1	5644	6015
GCA_900109865.1	GCA_900109865.1_01780	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.64	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	FOBP01000004.1	37846	39138
GCA_900109865.1	GCA_900109865.1_01839	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	FOBP01000004.1	100498	100845
GCA_900109865.1	GCA_900109865.1_01843	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	FOBP01000004.1	104528	105820
GCA_900109865.1	GCA_900109865.1_02237	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	FOBP01000020.1	8270	8836
GCA_900109865.1	GCA_900109865.1_02238	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	FOBP01000020.1	9014	10558
GCA_016907735.1	GCA_016907735.1_00177	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	246	386	63.73	57.20	250	WP_063844518.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAFBCP010000001.1	186326	187066
GCA_016907735.1	GCA_016907735.1_00413	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFBCP010000001.1	420336	421760
GCA_022807955.1	GCA_022807955.1_02928	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	71.74	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP094346.1	3100035	3100313
GCA_022807955.1	GCA_022807955.1_02929	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP094346.1	3100324	3102012
GCA_022807955.1	GCA_022807955.1_02930	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	121	121	100.00	75.21	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP094346.1	3102031	3102396
GCA_022807955.1	GCA_022807955.1_02931	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	72	78	97.44	86.84	76	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP094346.1	3102393	3102611
GCA_902485235.1	GCA_902485235.1_00303	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CABTJU010000008.1	273	1127
GCA_902485235.1	GCA_902485235.1_00618	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CABTJU010000021.1	3633	5552
GCA_902485235.1	GCA_902485235.1_01815	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CABTJU010000038.1	564	2345
GCA_030584765.1	GCA_030584765.1_05184	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	272	99.26	69.26	270	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP126004.1	5456769	5457578
GCA_030584765.1	GCA_030584765.1_07011	blaBJP	BJP family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	295	294	99.66	85.32	293	WP_011088970.1	BJP family subclass B3 metallo-beta-lactamase	NF012140.0	BJP family subclass B3 metallo-beta-lactamase	CP126004.1	7256756	7257643
GCA_030584765.1	GCA_030584765.1_07068	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	305	97.38	54.21	297	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP126004.1	7325188	7326087
GCA_000251805.2	GCA_000251805.2_00838	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AIKY01000003.1	45	1964
GCA_000251805.2	GCA_000251805.2_00843	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AIKY01000003.1	3690	5153
GCA_000251805.2	GCA_000251805.2_00844	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AIKY01000003.1	5273	6490
GCA_000251805.2	GCA_000251805.2_00949	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AIKY01000003.1	108177	108605
GCA_000251805.2	GCA_000251805.2_01755	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	388	399	97.24	99.74	388	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AIKY01000002.1	485150	486316
GCA_024105055.1	GCA_024105055.1_00121	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDUB010000016.1	2076	2486
GCA_024105055.1	GCA_024105055.1_01847	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAHDUB010000005.1	210103	210957
GCA_000504265.1	GCA_000504265.1_02272	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	275	269	96.28	53.96	265	WP_338424127.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	KI632510.1	2306009	2306836
GCA_000504265.1	GCA_000504265.1_03581	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	263	266	97.74	57.69	260	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	KI632510.1	3628038	3628829
GCA_000504265.1	GCA_000504265.1_04092	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	154	92.86	61.54	143	WP_015860243.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	KI632510.1	4161572	4161991
GCA_029925065.1	GCA_029925065.1_00165	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHR010000011.1	60455	61744
GCA_029925065.1	GCA_029925065.1_00844	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREHR010000001.1	361945	363018
GCA_029925065.1	GCA_029925065.1_00912	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAREHR010000020.1	410	733
GCA_029925065.1	GCA_029925065.1_00920	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAREHR010000024.1	151	636
GCA_000340645.1	GCA_000340645.1_00581	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	92.31	66.67	204	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CM001795.1	614047	614694
GCA_902482805.1	GCA_902482805.1_01068	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	130	120	100.00	48.85	131	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABTAS010000005.1	123031	123423
GCA_915063725.1	GCA_915063725.1_02570	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	284	98.94	55.87	281	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAJZDL010000122.1	2388	3236
GCA_021513055.1	GCA_021513055.1_00045	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	CP090989.1	49180	49818
GCA_021513055.1	GCA_021513055.1_00092	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP090989.1	97051	98340
GCA_021513055.1	GCA_021513055.1_00095	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP090989.1	100518	100865
GCA_021513055.1	GCA_021513055.1_00168	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP090989.1	187331	187759
GCA_021513055.1	GCA_021513055.1_00222	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP090989.1	248865	249932
GCA_001809695.1	GCA_001809695.1_02064	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.55	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV798510.1	300568	301989
GCA_030218125.1	GCA_030218125.1_01945	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASOPB010000009.1	47611	49251
GCA_001553035.1	GCA_001553035.1_00755	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KQ959950.1	24013	25653
GCA_001553035.1	GCA_001553035.1_00834	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KQ959954.1	78842	80059
GCA_001553035.1	GCA_001553035.1_00835	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KQ959954.1	80179	81642
GCA_000751135.1	GCA_000751135.1_00890	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CCJT01000018.1	2198	3034
GCA_000751135.1	GCA_000751135.1_02222	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CCJT01000033.1	338	1153
GCA_000751135.1	GCA_000751135.1_02224	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CCJT01000033.1	2386	3246
GCA_000751135.1	GCA_000751135.1_02238	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089072.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CCJT01000033.1	12766	13971
GCA_001811425.1	GCA_001811425.1_01150	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_063856405.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV804723.1	5000	6919
GCA_016728725.1	GCA_016728725.1_00956	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.55	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP068168.1	1075355	1076776
GCA_003857195.1	GCA_003857195.1_00635	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	RCTT01000014.1	1336	1896
GCA_003857195.1	GCA_003857195.1_00636	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	RCTT01000014.1	2080	3624
GCA_003857195.1	GCA_003857195.1_01510	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	RCTT01000003.1	287757	289049
GCA_003857195.1	GCA_003857195.1_01540	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	RCTT01000033.1	1292	1615
GCA_003857195.1	GCA_003857195.1_01546	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	RCTT01000004.1	2639	2986
GCA_003857195.1	GCA_003857195.1_01550	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	RCTT01000004.1	6669	7961
GCA_027662825.1	GCA_027662825.1_00366	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.99	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQDIZ010000001.1	377842	379566
GCA_027662825.1	GCA_027662825.1_00367	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	94.64	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQDIZ010000001.1	379568	381304
GCA_027662825.1	GCA_027662825.1_00589	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQDIZ010000001.1	627377	627805
GCA_029927405.1	GCA_029927405.1_01616	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREDA010000003.1	19567	20640
GCA_029927405.1	GCA_029927405.1_01728	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDA010000003.1	162528	163817
GCA_029927405.1	GCA_029927405.1_01729	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREDA010000003.1	163835	164236
GCA_029927405.1	GCA_029927405.1_02327	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDA010000006.1	60515	61804
GCA_029927405.1	GCA_029927405.1_02430	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREDA010000009.1	2044	2424
GCA_029927405.1	GCA_029927405.1_02431	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREDA010000009.1	2414	4171
GCA_029927405.1	GCA_029927405.1_02432	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREDA010000009.1	4340	5185
GCA_016127975.1	GCA_016127975.1_00225	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	520	513	100.00	97.66	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CP066064.1	254287	255849
GCA_016127975.1	GCA_016127975.1_00227	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP066064.1	257427	258281
GCA_016127975.1	GCA_016127975.1_00972	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.33	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP066064.1	1136254	1138035
GCA_016127975.1	GCA_016127975.1_00981	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.33	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP066064.1	1149623	1151404
GCA_016127975.1	GCA_016127975.1_01010	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP066064.1	1181677	1182852
GCA_016127975.1	GCA_016127975.1_01011	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP066064.1	1183056	1183892
GCA_016127975.1	GCA_016127975.1_01012	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP066064.1	1183892	1184311
GCA_016127975.1	GCA_016127975.1_01015	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP066064.1	1185996	1186811
GCA_016127975.1	GCA_016127975.1_01827	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP066064.1	2090873	2092048
GCA_016127975.1	GCA_016127975.1_01941	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP066064.1	2224788	2226209
GCA_002860985.1	GCA_002860985.1_01352	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	PKIP01000002.1	191053	191898
GCA_002860985.1	GCA_002860985.1_01353	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	PKIP01000002.1	192005	193762
GCA_002860985.1	GCA_002860985.1_01354	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	PKIP01000002.1	193752	194132
GCA_002860985.1	GCA_002860985.1_01900	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PKIP01000004.1	138562	139854
GCA_002860985.1	GCA_002860985.1_01904	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	PKIP01000004.1	143537	143884
GCA_019456715.1	GCA_019456715.1_00053	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	392	399	87.72	98.57	350	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JACVSW010000011.1	26528	27706
GCA_901421975.1	GCA_901421975.1_01531	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	146	144	88.89	48.84	129	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	LR588407.1	1483297	1483737
GCA_901421975.1	GCA_901421975.1_01540	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	476	561	82.17	46.57	466	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LR588407.1	1492510	1493940
GCA_901421975.1	GCA_901421975.1_02398	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	302	98.68	44.12	306	WP_105777201.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	LR588407.1	2319303	2320187
GCA_009495335.1	GCA_009495335.1_02221	cfxA6	broad-spectrum class A beta-lactamase CfxA6	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	240	320	75.00	99.17	240	WP_117664257.1	broad-spectrum class A beta-lactamase CfxA6	NF012099.1	class A beta-lactamase, subclass A2	VZAH01000010.1	4967	5689
GCA_004368395.1	GCA_004368395.1_00480	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JTLX01000001.1	530480	531874
GCA_000251085.2	GCA_000251085.2_01155	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP003357.2	1082490	1082918
GCA_000251085.2	GCA_000251085.2_01288	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP003357.2	1212609	1213808
GCA_000251085.2	GCA_000251085.2_01948	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP003357.2	1835472	1837391
GCA_000251085.2	GCA_000251085.2_01953	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP003357.2	1839117	1840580
GCA_000251085.2	GCA_000251085.2_01954	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP003357.2	1840700	1841917
GCA_019375715.1	GCA_019375715.1_00116	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCK010000011.1	19025	20215
GCA_019375715.1	GCA_019375715.1_00502	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCK010000016.1	49622	50587
GCA_019375715.1	GCA_019375715.1_02394	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCK010000064.1	2315	3115
GCA_000960025.1	GCA_000960025.1_00609	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.74	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JYGQ01000001.1	567090	568289
GCA_000960025.1	GCA_000960025.1_01627	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JYGQ01000004.1	260358	262016
GCA_027474905.1	GCA_027474905.1_01371	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP101407.1	1402673	1404592
GCA_015558365.1	GCA_015558365.1_02487	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	218	207	100.00	81.64	207	WP_002570989.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JADMNX010000006.1	117590	118246
GCA_002763785.1	GCA_002763785.1_02272	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP024726.1	534055	534855
GCA_002763785.1	GCA_002763785.1_02286	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP024726.1	556307	558232
GCA_002763785.1	GCA_002763785.1_02291	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP024726.1	562378	563343
GCA_001692965.1	GCA_001692965.1_01155	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LYSN01000011.1	5203	5604
GCA_001692965.1	GCA_001692965.1_01794	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LYSN01000026.1	2060	2470
GCA_019343495.1	GCA_019343495.1_00097	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	97.23	76.68	386	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP072549.1	103169	104389
GCA_019343495.1	GCA_019343495.1_02121	blaOXA-283	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	276	276	100.00	100.00	276	WP_004647119.1	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	NF000436.2	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	CP072549.1	2200008	2200838
GCA_019343495.1	GCA_019343495.1_03107	aph(3)-VIa	aminoglycoside O-phosphotransferase APH(3)-VIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	259	259	100.00	100.00	259	WP_000422636.1	aminoglycoside O-phosphotransferase APH(3)-VIa	NF033062.0	APH(3)-VI family aminoglycoside O-phosphotransferase	CP072550.1	63316	64095
GCA_019343495.1	GCA_019343495.1_03116	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP072550.1	71666	72505
GCA_019343495.1	GCA_019343495.1_03123	blaPER-1	inhibitor-resistant extended-spectrum class A beta-lactamase PER-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	308	308	100.00	100.00	308	WP_001100753.1	inhibitor-resistant extended-spectrum class A beta-lactamase PER-1	NF000389.2	PER family extended-spectrum class A beta-lactamase	CP072550.1	77451	78377
GCA_019343495.1	GCA_019343495.1_03125	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP072550.1	80653	81492
GCA_019343495.1	GCA_019343495.1_03126	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP072550.1	81486	81833
GCA_019343495.1	GCA_019343495.1_03127	aac(6)-Ib	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	172	184	93.48	100.00	172	WP_003159191.1	aminoglycoside N-acetyltransferase AAC(6)-Ib4	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP072550.1	82002	82520
GCA_019343495.1	GCA_019343495.1_03128	arr-3	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	EXACTP	150	150	100.00	100.00	150	WP_001749986.1	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP072550.1	82695	83147
GCA_019343495.1	GCA_019343495.1_03137	dfrA41	trimethoprim-resistant dihydrofolate reductase DfrA41	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	170	170	100.00	100.00	170	WP_004729503.1	trimethoprim-resistant dihydrofolate reductase DfrA41	NA	NA	CP072550.1	90360	90872
GCA_019343495.1	GCA_019343495.1_03259	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	404	404	100.00	100.00	404	WP_000214122.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP072550.1	230490	231704
GCA_019343495.1	GCA_019343495.1_03262	mph(E)	Mph(E) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EXACTP	294	294	100.00	100.00	294	WP_000155092.1	Mph(E) family macrolide 2-phosphotransferase	NF012158.1	Mph(E) family macrolide 2-phosphotransferase	CP072550.1	234158	235042
GCA_019343495.1	GCA_019343495.1_03263	msr(E)	ABC-F type ribosomal protection protein Msr(E)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN	EXACTP	491	491	100.00	100.00	491	WP_000052512.1	ABC-F type ribosomal protection protein Msr(E)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP072550.1	235098	236573
GCA_019343495.1	GCA_019343495.1_03319	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	421	421	100.00	88.60	421	WP_024160909.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP072553.1	36057	37322
GCA_002097595.2	GCA_002097595.2_00048	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	PARTIALP	130	260	50.00	99.23	130	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NA	NA	CP015447.2	49020	49412
GCA_002097595.2	GCA_002097595.2_00049	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP015447.2	49538	50269
GCA_002097595.2	GCA_002097595.2_00064	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	128	128	100.00	100.00	128	ADA79992.1	mercuric transport protein MerT	NA	NA	CP015447.2	62780	63166
GCA_002097595.2	GCA_002097595.2_00065	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP015447.2	63224	64867
GCA_002097595.2	GCA_002097595.2_00066	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	216	216	100.00	100.00	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP015447.2	64949	65599
GCA_002097595.2	GCA_002097595.2_00071	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP015447.2	69141	70520
GCA_002097595.2	GCA_002097595.2_00080	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP015447.2	76807	78813
GCA_002097595.2	GCA_002097595.2_00081	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP015447.2	78913	80670
GCA_002097595.2	GCA_002097595.2_00082	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	67	123	54.47	100.00	67	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NA	NA	CP015447.2	80670	80873
GCA_002097595.2	GCA_002097595.2_00157	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100289.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP015447.2	161298	162656
GCA_002097595.2	GCA_002097595.2_00353	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP015447.2	388644	389999
GCA_002097595.2	GCA_002097595.2_00392	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP015447.2	423172	423783
GCA_002097595.2	GCA_002097595.2_00419	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP015447.2	446383	448302
GCA_002097595.2	GCA_002097595.2_00882	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.17	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP015447.2	913123	913851
GCA_002097595.2	GCA_002097595.2_00883	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	242	242	100.00	100.00	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP015447.2	913875	914603
GCA_002097595.2	GCA_002097595.2_01622	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP015447.2	1680502	1681254
GCA_002097595.2	GCA_002097595.2_01675	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP015447.2	1733442	1734173
GCA_002097595.2	GCA_002097595.2_01676	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	PARTIALP	130	260	50.00	99.23	130	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NA	NA	CP015447.2	1734299	1734691
GCA_002097595.2	GCA_002097595.2_01803	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP015447.2	1880336	1881628
GCA_002097595.2	GCA_002097595.2_01846	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP015447.2	1918870	1919586
GCA_002097595.2	GCA_002097595.2_01849	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP015447.2	1921361	1922083
GCA_002097595.2	GCA_002097595.2_01850	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP015447.2	1922208	1922915
GCA_002097595.2	GCA_002097595.2_01860	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP015447.2	1933312	1934295
GCA_002097595.2	GCA_002097595.2_01861	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP015447.2	1934297	1935232
GCA_002097595.2	GCA_002097595.2_02088	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP015447.2	2107167	2107517
GCA_002097595.2	GCA_002097595.2_02093	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	CP015447.2	2110346	2110837
GCA_002097595.2	GCA_002097595.2_02177	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP015447.2	2168618	2168752
GCA_002097595.2	GCA_002097595.2_02229	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP015447.2	2206202	2207641
GCA_002097595.2	GCA_002097595.2_02235	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP015447.2	2210884	2211678
GCA_002097595.2	GCA_002097595.2_02475	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP015447.2	2447053	2448495
GCA_002097595.2	GCA_002097595.2_02650	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP015447.2	2600303	2600722
GCA_002097595.2	GCA_002097595.2_02737	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP015447.2	2689964	2690929
GCA_002097595.2	GCA_002097595.2_02738	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP015447.2	2691497	2692444
GCA_002097595.2	GCA_002097595.2_02739	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP015447.2	2692446	2693423
GCA_002097595.2	GCA_002097595.2_02810	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1038	1115	61.43	99.42	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP015447.2	2766832	2769948
GCA_002097595.2	GCA_002097595.2_02908	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP015447.2	2873255	2873635
GCA_002097595.2	GCA_002097595.2_02909	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP015447.2	2873625	2875382
GCA_002097595.2	GCA_002097595.2_02910	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP015447.2	2875489	2876334
GCA_002097595.2	GCA_002097595.2_02978	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP015447.2	2947178	2948707
GCA_002097595.2	GCA_002097595.2_03013	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	294	350	81.71	98.95	286	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP015447.2	2991036	2991920
GCA_000233265.2	GCA_000233265.2_00724	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	371	371	100.00	100.00	371	EHE72460.1	multidrug efflux MFS transporter PmrA	NA	NA	AGQI01000004.1	25130	26245
GCA_022568915.1	GCA_022568915.1_00704	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKF010000002.1	146130	147203
GCA_022568915.1	GCA_022568915.1_00840	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKF010000002.1	294695	295987
GCA_022568915.1	GCA_022568915.1_01569	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKF010000005.1	61724	62143
GCA_003469295.1	GCA_003469295.1_00625	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	QSJG01000014.1	36537	37049
GCA_003469295.1	GCA_003469295.1_00626	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	QSJG01000014.1	37074	38279
GCA_003469295.1	GCA_003469295.1_02394	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	297	300	95.33	50.00	288	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	QSJG01000040.1	21155	22048
GCA_003469295.1	GCA_003469295.1_02720	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	QSJG01000052.1	14552	15352
GCA_003469295.1	GCA_003469295.1_03005	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	QSJG01000007.1	53399	55324
GCA_019391915.1	GCA_019391915.1_02707	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXRF010000008.1	137673	139598
GCA_015549455.1	GCA_015549455.1_01473	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JADMYY010000027.1	15066	16991
GCA_015549455.1	GCA_015549455.1_02799	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	322	300	96.00	50.69	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JADMYY010000008.1	80706	81674
GCA_946997235.1	GCA_946997235.1_00166	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.22	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAMPUK010000002.1	29724	31202
GCA_021366695.1	GCA_021366695.1_01359	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCQA010000002.1	361933	363222
GCA_021366695.1	GCA_021366695.1_01366	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.28	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCQA010000002.1	368474	369766
GCA_021366695.1	GCA_021366695.1_01367	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	PARTIALP	76	104	71.15	95.95	74	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAHCQA010000002.1	369848	370078
GCA_021366695.1	GCA_021366695.1_02263	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAHCQA010000015.1	1310	2689
GCA_021366695.1	GCA_021366695.1_02270	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645013.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAHCQA010000017.1	1779	2264
GCA_008728715.1	GCA_008728715.1_01248	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP041723.1	1219039	1219458
GCA_008728715.1	GCA_008728715.1_01737	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP041723.1	1731186	1732259
GCA_008728715.1	GCA_008728715.1_01885	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP041723.1	1891910	1893202
GCA_000221565.2	GCA_000221565.2_01478	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	125	120	100.00	47.20	125	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AFUH01000001.1	1292877	1293254
GCA_000221565.2	GCA_000221565.2_02196	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	AFUH01000001.1	1893039	1894079
GCA_027662465.1	GCA_027662465.1_00876	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAQDJQ010000015.1	6899	7858
GCA_027662465.1	GCA_027662465.1_01700	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.25	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAQDJQ010000025.1	31612	32412
GCA_027662465.1	GCA_027662465.1_02601	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAQDJQ010000040.1	15547	17472
GCA_000800275.1	GCA_000800275.1_01042	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP009419.1	1062320	1063699
GCA_000800275.1	GCA_000800275.1_01754	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP009419.1	1805478	1806383
GCA_000800275.1	GCA_000800275.1_01880	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP009419.1	1940774	1942012
GCA_000800275.1	GCA_000800275.1_01881	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP009419.1	1942420	1943052
GCA_000800275.1	GCA_000800275.1_01883	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP009419.1	1943877	1945445
GCA_000800275.1	GCA_000800275.1_02083	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP009419.1	2155162	2156688
GCA_020386595.1	GCA_020386595.1_00090	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP077852.1	87746	88096
GCA_020386595.1	GCA_020386595.1_00095	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP077852.1	90311	90802
GCA_020386595.1	GCA_020386595.1_00099	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	257	257	100.00	98.05	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP077852.1	92511	93284
GCA_020386595.1	GCA_020386595.1_00169	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP077852.1	144349	144483
GCA_020386595.1	GCA_020386595.1_00317	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	98.96	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP077852.1	297623	299065
GCA_020386595.1	GCA_020386595.1_00491	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP077852.1	449472	449891
GCA_020386595.1	GCA_020386595.1_00575	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP077852.1	538032	538997
GCA_020386595.1	GCA_020386595.1_00576	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP077852.1	539564	540511
GCA_020386595.1	GCA_020386595.1_00577	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP077852.1	540513	541490
GCA_020386595.1	GCA_020386595.1_00654	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1371	1115	61.43	99.85	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP077852.1	619857	623972
GCA_020386595.1	GCA_020386595.1_00800	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP077852.1	779924	781453
GCA_020386595.1	GCA_020386595.1_00834	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP077852.1	824783	825835
GCA_020386595.1	GCA_020386595.1_00959	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP077852.1	965432	966790
GCA_020386595.1	GCA_020386595.1_01156	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP077852.1	1194137	1195492
GCA_020386595.1	GCA_020386595.1_01193	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP077852.1	1228800	1229411
GCA_020386595.1	GCA_020386595.1_02601	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP077852.1	2677816	2679108
GCA_020386595.1	GCA_020386595.1_02640	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	CP077852.1	2710242	2710964
GCA_020386595.1	GCA_020386595.1_02641	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP077852.1	2711089	2711796
GCA_020386595.1	GCA_020386595.1_02646	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP077852.1	2715927	2716910
GCA_020386595.1	GCA_020386595.1_02647	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP077852.1	2716912	2717847
GCA_020386595.1	GCA_020386595.1_02655	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP077852.1	2724049	2724804
GCA_020386595.1	GCA_020386595.1_02656	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP077852.1	2724843	2725238
GCA_020386595.1	GCA_020386595.1_02658	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.39	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP077852.1	2725768	2726496
GCA_020386595.1	GCA_020386595.1_02659	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP077852.1	2726531	2727250
GCA_020386595.1	GCA_020386595.1_02660	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP077852.1	2727531	2728295
GCA_009379145.1	GCA_009379145.1_00708	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXDA01000014.1	54637	55578
GCA_905372435.1	GCA_905372435.1_00002	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAJPOW010000001.1	2565	3530
GCA_003352405.1	GCA_003352405.1_01517	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.57	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031249.1	1528409	1529803
GCA_003352405.1	GCA_003352405.1_01832	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	123	100.00	44.12	136	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP031249.1	1812342	1812764
GCA_003352405.1	GCA_003352405.1_01895	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP031249.1	1873267	1874907
GCA_001814215.1	GCA_001814215.1_00003	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV815317.1	1108	2325
GCA_001814215.1	GCA_001814215.1_00004	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV815317.1	2445	3908
GCA_001814215.1	GCA_001814215.1_01642	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KV815334.1	267589	268017
GCA_000238135.1	GCA_000238135.1_01194	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.23	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JH414604.1	24822	26300
GCA_000238135.1	GCA_000238135.1_01630	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JH414610.1	37463	39382
GCA_000238135.1	GCA_000238135.1_02106	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.70	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JH414626.1	8682	10160
GCA_001975925.1	GCA_001975925.1_02008	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	MTPT01000067.1	2768	4192
GCA_001975925.1	GCA_001975925.1_02012	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	MTPT01000067.1	5915	6769
GCA_001975925.1	GCA_001975925.1_02124	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.33	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	MTPT01000076.1	151	1932
GCA_001975925.1	GCA_001975925.1_02220	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	MTPT01000085.1	515	1318
GCA_001975925.1	GCA_001975925.1_02221	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	MTPT01000085.1	1318	2154
GCA_001975925.1	GCA_001975925.1_02223	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	MTPT01000085.1	2358	3533
GCA_001975925.1	GCA_001975925.1_02230	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	MTPT01000089.1	149	2068
GCA_001975925.1	GCA_001975925.1_02296	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	MTPT01000098.1	88	903
GCA_009912935.1	GCA_009912935.1_00022	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	CP047794.1	20980	21471
GCA_009912935.1	GCA_009912935.1_00026	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP047794.1	22968	23318
GCA_009912935.1	GCA_009912935.1_00259	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	94.88	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP047794.1	196800	197564
GCA_009912935.1	GCA_009912935.1_00260	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	99.58	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP047794.1	197843	198562
GCA_009912935.1	GCA_009912935.1_00261	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	243	243	100.00	100.00	243	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP047794.1	198597	199328
GCA_009912935.1	GCA_009912935.1_00262	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	261	261	100.00	100.00	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP047794.1	199479	200264
GCA_009912935.1	GCA_009912935.1_00263	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	97.21	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP047794.1	200303	201058
GCA_009912935.1	GCA_009912935.1_00271	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.36	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP047794.1	207733	208668
GCA_009912935.1	GCA_009912935.1_00278	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	95.83	240	ABD31003.1	serine protease SplB	NA	NA	CP047794.1	214602	215324
GCA_009912935.1	GCA_009912935.1_00314	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.89	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP047794.1	244875	246167
GCA_009912935.1	GCA_009912935.1_01750	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	95.07	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP047794.1	1716020	1716631
GCA_009912935.1	GCA_009912935.1_01787	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.45	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP047794.1	1749970	1751325
GCA_009912935.1	GCA_009912935.1_01979	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP047794.1	1974646	1976004
GCA_009912935.1	GCA_009912935.1_02031	selZ	staphylococcal enterotoxin type Z	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	259	259	100.00	96.14	259	SUK32596.1	staphylococcal enterotoxin type Z	NA	NA	CP047794.1	2033849	2034628
GCA_009912935.1	GCA_009912935.1_02088	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.89	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP047794.1	2094204	2097755
GCA_009912935.1	GCA_009912935.1_02107	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP047794.1	2114773	2115825
GCA_009912935.1	GCA_009912935.1_02146	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP047794.1	2162687	2164216
GCA_009912935.1	GCA_009912935.1_02244	sey	staphylococcal enterotoxin type Y	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	221	221	100.00	98.19	221	BAS21358.1	staphylococcal enterotoxin type Y	NA	NA	CP047794.1	2266830	2267495
GCA_009912935.1	GCA_009912935.1_02387	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP047794.1	2412582	2413559
GCA_009912935.1	GCA_009912935.1_02388	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP047794.1	2413561	2414508
GCA_009912935.1	GCA_009912935.1_02390	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	182	309	54.05	100.00	167	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP047794.1	2415481	2416029
GCA_009912935.1	GCA_009912935.1_02643	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP047794.1	2651048	2652490
GCA_027670565.1	GCA_027670565.1_00381	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856415.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAQEBN010000013.1	46205	48124
GCA_027670565.1	GCA_027670565.1_00384	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAQEBN010000130.1	149	943
GCA_027670565.1	GCA_027670565.1_00385	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAQEBN010000130.1	1036	1578
GCA_027670565.1	GCA_027670565.1_00454	erm(Q)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(Q)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN	EXACTP	257	257	100.00	100.00	257	WP_007286427.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(Q)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQEBN010000149.1	44	817
GCA_027670565.1	GCA_027670565.1_00777	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	187	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	JAQEBN010000021.1	15839	16402
GCA_027670565.1	GCA_027670565.1_00785	aadE	aminoglycoside 6-adenylyltransferase AadE	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	288	288	100.00	100.00	288	WP_001255868.1	aminoglycoside 6-adenylyltransferase AadE	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAQEBN010000021.1	22531	23397
GCA_027670565.1	GCA_027670565.1_00786	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	250	245	100.00	99.59	245	WP_002321849.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQEBN010000021.1	24023	24775
GCA_027670565.1	GCA_027670565.1_01049	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	284	89.08	57.31	253	WP_006555379.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAQEBN010000029.1	9152	10051
GCA_027670565.1	GCA_027670565.1_02044	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	100.00	42.28	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQEBN010000007.1	53307	53660
GCA_001072435.1	GCA_001072435.1_00305	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	59.69	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JVKP01000011.1	22606	23034
GCA_001072435.1	GCA_001072435.1_00404	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVKP01000017.1	8055	9779
GCA_001072435.1	GCA_001072435.1_00405	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.49	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVKP01000017.1	9781	11517
GCA_001072435.1	GCA_001072435.1_01906	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JVKP01000054.1	26600	27817
GCA_001072435.1	GCA_001072435.1_01907	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JVKP01000054.1	27937	29400
GCA_017655725.1	GCA_017655725.1_00516	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	44.80	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040415.1	497643	498017
GCA_017655725.1	GCA_017655725.1_00667	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	246	244	99.59	87.35	245	WP_011117197.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP040415.1	654572	655312
GCA_017655725.1	GCA_017655725.1_01387	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP040415.1	1409645	1410049
GCA_017655725.1	GCA_017655725.1_01388	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP040415.1	1410266	1411009
GCA_001412635.1	GCA_001412635.1_00276	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP012805.1	244068	245987
GCA_030676655.1	GCA_030676655.1_00544	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAUUIN010000001.1	13371	15290
GCA_002087975.1	GCA_002087975.1_00021	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CM007846.1	2746	4125
GCA_002087975.1	GCA_002087975.1_00958	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NARC01000013.1	17140	17487
GCA_002087975.1	GCA_002087975.1_00961	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	NARC01000013.1	19665	20954
GCA_002087975.1	GCA_002087975.1_01456	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	NARC01000020.1	3734	4069
GCA_002087975.1	GCA_002087975.1_01457	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	547	547	100.00	99.82	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NARC01000020.1	4127	5770
GCA_002087975.1	GCA_002087975.1_01458	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	NARC01000020.1	5852	6502
GCA_002087975.1	GCA_002087975.1_02038	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NARC01000006.1	53754	54599
GCA_002087975.1	GCA_002087975.1_02039	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	NARC01000006.1	54706	56463
GCA_002087975.1	GCA_002087975.1_02040	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	NARC01000006.1	56453	56833
GCA_002087975.1	GCA_002087975.1_02152	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	NARC01000007.1	57800	58228
GCA_000330825.2	GCA_000330825.2_01101	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	AMYL01000003.1	218829	219581
GCA_000330825.2	GCA_000330825.2_01270	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AMYL01000005.1	8604	9896
GCA_000330825.2	GCA_000330825.2_01309	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	AMYL01000006.1	27972	28688
GCA_000330825.2	GCA_000330825.2_01312	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	AMYL01000006.1	30463	31185
GCA_000330825.2	GCA_000330825.2_01313	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	99.57	235	ABD31004.1	serine protease SplA	NA	NA	AMYL01000006.1	31310	32017
GCA_000330825.2	GCA_000330825.2_01323	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	AMYL01000006.1	43666	44649
GCA_000330825.2	GCA_000330825.2_01324	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	AMYL01000006.1	44651	45571
GCA_000330825.2	GCA_000330825.2_01496	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	AMYL01000007.1	102368	102502
GCA_000330825.2	GCA_000330825.2_01642	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	AMYL01000010.1	3293	4735
GCA_000330825.2	GCA_000330825.2_01812	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AMYL01000012.1	20687	21106
GCA_000330825.2	GCA_000330825.2_01899	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	AMYL01000012.1	110348	111313
GCA_000330825.2	GCA_000330825.2_01900	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	AMYL01000012.1	111881	112828
GCA_000330825.2	GCA_000330825.2_01901	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	AMYL01000012.1	112830	113807
GCA_000330825.2	GCA_000330825.2_02121	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	AMYL01000013.1	159071	160600
GCA_000330825.2	GCA_000330825.2_02155	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AMYL01000013.1	203934	204986
GCA_000330825.2	GCA_000330825.2_02288	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	AMYL01000013.1	349998	351356
GCA_000330825.2	GCA_000330825.2_02491	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	AMYL01000013.1	580813	582168
GCA_000330825.2	GCA_000330825.2_02529	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	AMYL01000013.1	615343	615954
GCA_000330825.2	GCA_000330825.2_02673	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	AMYL01000016.1	5011	5325
GCA_000330825.2	GCA_000330825.2_02674	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.53	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AMYL01000016.1	5325	6614
GCA_000330825.2	GCA_000330825.2_02675	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	AMYL01000016.1	6632	7027
GCA_000330825.2	GCA_000330825.2_02695	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	AMYL01000016.1	24106	25539
GCA_028327565.1	GCA_028327565.1_02487	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	218	207	100.00	81.64	207	WP_002570989.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JAQMLS010000006.1	117590	118246
GCA_000403725.2	GCA_000403725.2_00709	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.55	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	HG001320.1	722109	723533
GCA_000403725.2	GCA_000403725.2_01400	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	479	513	93.37	92.28	479	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	HG001321.1	669752	671191
GCA_003495575.1	GCA_003495575.1_01737	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	95.67	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQEH01000010.1	14594	16120
GCA_003495575.1	GCA_003495575.1_01883	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQEH01000012.1	31271	32134
GCA_003495575.1	GCA_003495575.1_01884	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.87	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQEH01000012.1	32151	33389
GCA_003315235.1	GCA_003315235.1_00148	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	459	459	100.00	100.00	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	QNRU01000001.1	136618	137997
GCA_003315235.1	GCA_003315235.1_01125	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	412	412	100.00	100.00	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QNRU01000011.1	40796	42034
GCA_003315235.1	GCA_003315235.1_01126	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	210	210	100.00	100.00	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QNRU01000011.1	42285	42917
GCA_003315235.1	GCA_003315235.1_01128	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	99.23	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QNRU01000011.1	43554	45122
GCA_003315235.1	GCA_003315235.1_01195	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	280	301	91.36	98.18	275	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QNRU01000012.1	52102	52944
GCA_003315235.1	GCA_003315235.1_01313	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	507	100.00	99.41	507	AAD54074.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QNRU01000015.1	13534	15057
GCA_001811065.1	GCA_001811065.1_00381	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV803527.1	139861	141780
GCA_016126015.1	GCA_016126015.1_00187	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAEFDB010000001.1	205995	206795
GCA_016126015.1	GCA_016126015.1_01603	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAEFDB010000002.1	173850	175775
GCA_016126015.1	GCA_016126015.1_01632	blaCSP	CSP family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	305	305	100.00	99.67	305	WP_063859920.1	extended-spectrum class A beta-lactamase CSP-1	NF012099.1	class A beta-lactamase, subclass A2	JAEFDB010000002.1	198477	199394
GCA_001215085.1	GCA_001215085.1_01350	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CTEB01000001.1	1432276	1433349
GCA_001215085.1	GCA_001215085.1_01516	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CTEB01000001.1	1628803	1630092
GCA_001215085.1	GCA_001215085.1_02191	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CTEB01000001.1	2250800	2252089
GCA_001215085.1	GCA_001215085.1_02192	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CTEB01000001.1	2252107	2252508
GCA_001215085.1	GCA_001215085.1_02401	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CTEB01000001.1	2416699	2417544
GCA_001215085.1	GCA_001215085.1_02402	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CTEB01000001.1	2417651	2419408
GCA_001215085.1	GCA_001215085.1_02403	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CTEB01000001.1	2419398	2419778
GCA_001215085.1	GCA_001215085.1_02471	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CTEB01000001.1	2480034	2482040
GCA_001215085.1	GCA_001215085.1_02493	aph(2)-Ia	aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	HMM	349	479	72.44	99.14	347	WP_001028144.1	aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CTEB01000001.1	2501221	2502270
GCA_000477695.1	GCA_000477695.1_00530	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KI515694.1	561376	561786
GCA_019703495.1	GCA_019703495.1_01230	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	123	100.00	44.12	136	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP018769.1	1228885	1229307
GCA_019703495.1	GCA_019703495.1_01562	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018769.1	1568107	1569501
GCA_014195675.1	GCA_014195675.1_00213	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	310	309	92.88	40.48	289	WP_063864599.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JACICE010000001.1	209206	210138
GCA_014195675.1	GCA_014195675.1_01821	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	311	310	99.35	66.02	309	WP_256875606.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	JACICE010000002.1	489546	490481
GCA_009496505.1	GCA_009496505.1_01052	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJR01000003.1	91615	92814
GCA_000237125.3	GCA_000237125.3_00046	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP003166.2	48148	50154
GCA_000237125.3	GCA_000237125.3_00126	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP003166.2	141856	143214
GCA_000237125.3	GCA_000237125.3_00312	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP003166.2	361812	363167
GCA_000237125.3	GCA_000237125.3_00351	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	94.58	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP003166.2	398661	399272
GCA_000237125.3	GCA_000237125.3_00819	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.59	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP003166.2	872823	873551
GCA_000237125.3	GCA_000237125.3_00820	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.59	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP003166.2	873575	874303
GCA_000237125.3	GCA_000237125.3_00840	seb	staphylococcal enterotoxin type B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	AAA88550.1	staphylococcal enterotoxin type B	NA	NA	CP003166.2	884498	885298
GCA_000237125.3	GCA_000237125.3_01453	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP003166.2	1539912	1540889
GCA_000237125.3	GCA_000237125.3_01454	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP003166.2	1540891	1541829
GCA_000237125.3	GCA_000237125.3_01810	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP003166.2	1878705	1879997
GCA_000237125.3	GCA_000237125.3_01845	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP003166.2	1910883	1911233
GCA_000237125.3	GCA_000237125.3_02019	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	96.15	26	AGU62139.1	delta-hemolysin	NA	NA	CP003166.2	2053560	2053694
GCA_000237125.3	GCA_000237125.3_02172	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.92	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP003166.2	2208302	2209744
GCA_000237125.3	GCA_000237125.3_02429	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP003166.2	2449201	2450166
GCA_000237125.3	GCA_000237125.3_02430	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.78	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP003166.2	2450734	2451681
GCA_000237125.3	GCA_000237125.3_02431	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP003166.2	2451683	2452660
GCA_000237125.3	GCA_000237125.3_02567	sey	staphylococcal enterotoxin type Y	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	221	221	100.00	99.55	221	BAS21358.1	staphylococcal enterotoxin type Y	NA	NA	CP003166.2	2599337	2600002
GCA_000237125.3	GCA_000237125.3_02663	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP003166.2	2702238	2703767
GCA_000237125.3	GCA_000237125.3_02699	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP003166.2	2750411	2751463
GCA_000237125.3	GCA_000237125.3_02752	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	99.02	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP039996.1	2760	3377
GCA_000237125.3	GCA_000237125.3_02765	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP039996.1	12942	14321
GCA_028583345.1	GCA_028583345.1_01373	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	JANYMK010000004.1	106265	107206
GCA_016834475.1	GCA_016834475.1_00035	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP069215.1	37719	39725
GCA_016834475.1	GCA_016834475.1_00036	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP069215.1	39825	40811
GCA_016834475.1	GCA_016834475.1_00055	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP069215.1	57511	58800
GCA_016834475.1	GCA_016834475.1_00058	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP069215.1	60978	61325
GCA_016834475.1	GCA_016834475.1_00134	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	96	142	62.68	100.00	89	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP069215.1	144884	145174
GCA_016834475.1	GCA_016834475.1_00858	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP069215.1	881268	881909
GCA_016834475.1	GCA_016834475.1_00879	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP069215.1	900766	901611
GCA_016834475.1	GCA_016834475.1_00880	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP069215.1	901718	903475
GCA_016834475.1	GCA_016834475.1_00881	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	97.62	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP069215.1	903465	903845
GCA_016834475.1	GCA_016834475.1_02475	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_001829870.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CP069216.1	6098	6583
GCA_016834475.1	GCA_016834475.1_02477	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP069216.1	7718	8461
GCA_016834475.1	GCA_016834475.1_02490	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP069216.1	18388	19827
GCA_016834475.1	GCA_016834475.1_02492	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP069216.1	20744	21304
GCA_016834475.1	GCA_016834475.1_02493	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP069216.1	21488	23032
GCA_016834475.1	GCA_016834475.1_02496	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	PARTIALP	703	1024	68.65	99.86	703	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NA	NA	CP069217.1	257	2368
GCA_030403525.1	GCA_030403525.1_00596	blaLUT	LUT family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	296	296	100.00	99.66	296	WP_010798607.1	extended-spectrum class A beta-lactamase LUT-1	NF000324.2	LUT family class A beta-lactamase	JAUEPD010000013.1	19498	20388
GCA_030403525.1	GCA_030403525.1_02090	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	58.24	261	WP_003161096.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	JAUEPD010000002.1	488537	489319
GCA_030403525.1	GCA_030403525.1_04114	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	410	414	95.89	71.36	398	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	JAUEPD010000007.1	218886	220118
GCA_000742135.1	GCA_000742135.1_00371	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	140	139	99.28	99.28	138	WP_004146118.1	FosA5 family fosfomycin resistance glutathione transferase	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	KN046818.1	389508	389930
GCA_000742135.1	GCA_000742135.1_01417	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	410	410	100.00	100.00	410	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	KN046818.1	1480930	1482162
GCA_000742135.1	GCA_000742135.1_02141	blaSHV	SHV family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	322	286	100.00	100.00	286	WP_001620095.1	broad-spectrum class A beta-lactamase SHV-1	NF000285.3	SHV family class A beta-lactamase	KN046818.1	2246634	2247602
GCA_000742135.1	GCA_000742135.1_02514	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	116	102	100.00	56.91	123	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	KN046818.1	2611449	2611799
GCA_000742135.1	GCA_000742135.1_02942	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.83	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	KN046818.1	3045067	3046869
GCA_000742135.1	GCA_000742135.1_02943	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	570	600	95.00	99.30	570	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	KN046818.1	3046856	3048568
GCA_000742135.1	GCA_000742135.1_02974	clbN	colibactin non-ribosomal peptide synthetase ClbN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1455	1455	100.00	99.59	1455	AMH08480.1	colibactin non-ribosomal peptide synthetase ClbN	NA	NA	KN046818.1	3096468	3100835
GCA_000742135.1	GCA_000742135.1_03396	crcB	fluoride efflux transporter CrcB	plus	STRESS	BIOCIDE	FLUORIDE	FLUORIDE	EXACTP	137	137	100.00	100.00	137	CCN31428.1	fluoride efflux transporter CrcB	NA	NA	KN046818.1	3523801	3524214
GCA_000742135.1	GCA_000742135.1_03411	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	140	141	98.58	77.70	139	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	KN046818.1	3535382	3535804
GCA_000742135.1	GCA_000742135.1_03750	oqxB19	multidrug efflux RND transporter permease subunit OqxB19	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	ALLELEP	1050	1050	100.00	100.00	1050	WP_004149399.1	multidrug efflux RND transporter permease subunit OqxB19	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	KN046818.1	3880950	3884102
GCA_000742135.1	GCA_000742135.1_03751	oqxA10	multidrug efflux RND transporter periplasmic adaptor subunit OqxA10	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	ALLELEP	391	391	100.00	100.00	391	WP_004149398.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA10	NF000272.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	KN046818.1	3884126	3885301
GCA_000742135.1	GCA_000742135.1_04334	clbB	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	3206	3206	100.00	99.66	3206	AMQ58400.1	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	NA	NA	KN046818.1	4502510	4512130
GCA_000742135.1	GCA_000742135.1_04763	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	98.98	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	KN046818.1	4966168	4967352
GCA_000742135.1	GCA_000742135.1_04906	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	KN046818.1	5111204	5112106
GCA_000742135.1	GCA_000742135.1_05231	rmpA	mucoid phenotype regulator RmpA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	210	210	100.00	98.10	210	AMA27886.1	mucoid phenotype regulator RmpA	NA	NA	KN046820.1	21099	21731
GCA_000742135.1	GCA_000742135.1_05232	rmpC	mucoid phenotype regulator RmpC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	183	133	100.00	88.72	133	AIK83625.1	mucoid phenotype regulator RmpC	NA	NA	KN046820.1	22120	22671
GCA_000742135.1	GCA_000742135.1_05233	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	391	371	95.96	89.33	356	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	KN046820.1	23246	24421
GCA_023277665.1	GCA_023277665.1_00081	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP083174.1	95328	96806
GCA_023277665.1	GCA_023277665.1_00283	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP083174.1	339015	339869
GCA_023277665.1	GCA_023277665.1_01117	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	673	639	100.00	99.69	639	WP_063856112.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP083174.1	1401632	1403653
GCA_023277665.1	GCA_023277665.1_01118	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	428	458	93.45	100.00	428	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012175.1	Tet(L)/Tet(K)/Tet(45) family tetracycline efflux MFS transporter	CP083174.1	1404200	1405486
GCA_001310935.1	GCA_001310935.1_01188	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	BAZV01000009.1	51400	51828
GCA_022359935.1	GCA_022359935.1_02518	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	97.48	60.98	387	WP_061345584.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	JAKSED010000001.1	2530355	2531548
GCA_022359935.1	GCA_022359935.1_02749	tet(G)	tetracycline efflux MFS transporter Tet(G)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	391	391	100.00	95.14	391	WP_001257840.1	tetracycline efflux MFS transporter Tet(G)	NF012192.0	tetracycline efflux MFS transporter Tet(G)	JAKSED010000001.1	2761332	2762507
GCA_022359935.1	GCA_022359935.1_02751	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	404	404	99.75	90.57	403	WP_014386424.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	JAKSED010000001.1	2763484	2764698
GCA_022359935.1	GCA_022359935.1_03261	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	247	277	85.92	58.40	238	WP_337883258.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	JAKSED010000001.1	3286464	3287207
GCA_022359935.1	GCA_022359935.1_04441	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	745	561	82.17	48.30	470	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKSED010000005.1	68891	71128
GCA_022359935.1	GCA_022359935.1_04625	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	745	561	82.17	48.30	470	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKSED010000006.1	59388	61625
GCA_027686135.1	GCA_027686135.1_00754	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	297	300	95.33	49.31	288	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAQCTE010000017.1	69940	70833
GCA_027686135.1	GCA_027686135.1_01286	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAQCTE010000025.1	38819	40744
GCA_027686135.1	GCA_027686135.1_02731	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.55	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	JAQCTE010000056.1	229	2154
GCA_027686135.1	GCA_027686135.1_02887	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JAQCTE010000006.1	73380	74585
GCA_027686135.1	GCA_027686135.1_02888	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JAQCTE010000006.1	74610	75122
GCA_027686135.1	GCA_027686135.1_03432	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	261	266	98.12	98.47	261	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAQCTE010000099.1	173	958
GCA_007004245.1	GCA_007004245.1_00025	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	VJMN01000010.1	19862	20422
GCA_007004245.1	GCA_007004245.1_00026	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	VJMN01000010.1	20606	22150
GCA_007004245.1	GCA_007004245.1_01226	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	118	131	76.34	94.00	100	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	VJMN01000003.1	102357	102713
GCA_007004245.1	GCA_007004245.1_01309	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	VJMN01000003.1	188372	188719
GCA_007004245.1	GCA_007004245.1_01312	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	VJMN01000003.1	190887	192176
GCA_022689425.1	GCA_022689425.1_00451	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXI010000017.1	4098	5387
GCA_022689425.1	GCA_022689425.1_00452	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALCXI010000017.1	5405	5806
GCA_022689425.1	GCA_022689425.1_01497	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXI010000003.1	242033	242452
GCA_022689425.1	GCA_022689425.1_01986	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXI010000006.1	4304	5596
GCA_022689425.1	GCA_022689425.1_02128	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXI010000007.1	10223	11296
GCA_938038995.1	GCA_938038995.1_00009	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CALHVO010000001.1	6221	7411
GCA_025909175.1	GCA_025909175.1_00092	qnrD1	quinolone resistance pentapeptide repeat protein QnrD1	core	AMR	AMR	QUINOLONE	QUINOLONE	ALLELEP	214	214	100.00	100.00	214	WP_012634451.1	quinolone resistance pentapeptide repeat protein QnrD1	NF000139.2	QnrD family quinolone resistance pentapeptide repeat protein	JAPAIC010000015.1	1285	1929
GCA_001697645.1	GCA_001697645.1_00706	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016661.1	722151	723677
GCA_001697645.1	GCA_001697645.1_00907	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016661.1	935144	936712
GCA_001697645.1	GCA_001697645.1_00909	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016661.1	937537	938169
GCA_001697645.1	GCA_001697645.1_00910	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016661.1	938577	939815
GCA_001697645.1	GCA_001697645.1_01036	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016661.1	1074286	1075191
GCA_001697645.1	GCA_001697645.1_01747	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016661.1	1816905	1818284
GCA_027594605.1	GCA_027594605.1_00048	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092476.1	50822	52111
GCA_027594605.1	GCA_027594605.1_00051	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP092476.1	53408	55414
GCA_027594605.1	GCA_027594605.1_00070	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP092476.1	71080	71481
GCA_027594605.1	GCA_027594605.1_00071	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092476.1	71499	72791
GCA_027594605.1	GCA_027594605.1_00157	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092476.1	149445	150737
GCA_027594605.1	GCA_027594605.1_01424	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP092476.1	1382372	1382869
GCA_027594605.1	GCA_027594605.1_01699	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP092476.1	1655099	1656538
GCA_027594605.1	GCA_027594605.1_02525	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP092476.1	2468795	2469640
GCA_027594605.1	GCA_027594605.1_02526	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP092476.1	2469747	2471504
GCA_027594605.1	GCA_027594605.1_02527	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP092476.1	2471494	2471874
GCA_027594605.1	GCA_027594605.1_02535	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP092476.1	2479428	2480222
GCA_027594605.1	GCA_027594605.1_02536	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP092476.1	2480315	2480857
GCA_027594605.1	GCA_027594605.1_02541	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	CP092476.1	2484483	2484806
GCA_027594605.1	GCA_027594605.1_02604	catA	type A-8 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	215	215	100.00	100.00	215	WP_002352254.1	type A-8 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP092477.1	5797	6444
GCA_025272695.1	GCA_025272695.1_01563	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102087.1	1564605	1565894
GCA_025272695.1	GCA_025272695.1_01565	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP102087.1	1566201	1566581
GCA_025272695.1	GCA_025272695.1_01566	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP102087.1	1566571	1568328
GCA_025272695.1	GCA_025272695.1_01567	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP102087.1	1568435	1569280
GCA_025272695.1	GCA_025272695.1_02293	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP102087.1	2307870	2308943
GCA_025272695.1	GCA_025272695.1_02404	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102087.1	2450854	2452143
GCA_025272695.1	GCA_025272695.1_02405	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP102087.1	2452161	2452562
GCA_022485485.1	GCA_022485485.1_01499	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKVES010000038.1	3161	4801
GCA_008726645.1	GCA_008726645.1_00221	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VYWB01000013.1	2410	3834
GCA_008726645.1	GCA_008726645.1_00225	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VYWB01000013.1	5556	6410
GCA_008726645.1	GCA_008726645.1_00621	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VYWB01000019.1	48663	49838
GCA_008726645.1	GCA_008726645.1_00623	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	VYWB01000019.1	50042	50878
GCA_008726645.1	GCA_008726645.1_00624	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	205	267	76.78	99.51	205	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	VYWB01000019.1	50878	51495
GCA_008726645.1	GCA_008726645.1_01766	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	VYWB01000054.1	94	909
GCA_000315445.1	GCA_000315445.1_00451	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	110	123	82.11	49.50	101	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JH992957.1	463441	463773
GCA_000315445.1	GCA_000315445.1_01606	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	98.26	57.09	282	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JH992962.1	730	1593
GCA_022695905.1	GCA_022695905.1_00028	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKUUX010000001.1	30502	30903
GCA_022695905.1	GCA_022695905.1_00029	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKUUX010000001.1	30921	32210
GCA_022695905.1	GCA_022695905.1_00032	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKUUX010000001.1	33507	35513
GCA_022695905.1	GCA_022695905.1_00051	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKUUX010000001.1	51283	51684
GCA_022695905.1	GCA_022695905.1_00052	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKUUX010000001.1	51702	52994
GCA_022695905.1	GCA_022695905.1_00140	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKUUX010000001.1	130926	132218
GCA_022695905.1	GCA_022695905.1_00239	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JAKUUX010000001.1	233514	234011
GCA_022695905.1	GCA_022695905.1_01673	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAKUUX010000001.1	1630939	1632378
GCA_022695905.1	GCA_022695905.1_02265	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKUUX010000001.1	2219449	2220915
GCA_022695905.1	GCA_022695905.1_02266	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAKUUX010000001.1	2221014	2221913
GCA_022695905.1	GCA_022695905.1_02541	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKUUX010000001.1	2474031	2474876
GCA_022695905.1	GCA_022695905.1_02542	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKUUX010000001.1	2474983	2476740
GCA_022695905.1	GCA_022695905.1_02543	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKUUX010000001.1	2476730	2477110
GCA_022695905.1	GCA_022695905.1_02549	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	JAKUUX010000001.1	2483667	2483990
GCA_022695905.1	GCA_022695905.1_02622	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	1024	1024	100.00	99.80	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JAKUUX010000002.1	14608	17682
GCA_022695905.1	GCA_022695905.1_02629	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAKUUX010000002.1	24889	25449
GCA_022695905.1	GCA_022695905.1_02630	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAKUUX010000002.1	25633	27177
GCA_022695905.1	GCA_022695905.1_02633	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAKUUX010000003.1	679	2058
GCA_022695905.1	GCA_022695905.1_02653	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	159	244	65.16	99.37	159	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NA	NA	JAKUUX010000006.1	1837	2316
GCA_002999135.1	GCA_002999135.1_01738	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP027229.1	1904139	1905104
GCA_002999135.1	GCA_002999135.1_02271	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP027229.1	2470601	2471566
GCA_002999135.1	GCA_002999135.1_02465	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP027229.1	2692506	2693471
GCA_902509535.1	GCA_902509535.1_00039	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LR735440.1	40286	42292
GCA_902509535.1	GCA_902509535.1_00040	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	LR735440.1	42392	43378
GCA_902509535.1	GCA_902509535.1_00139	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR735440.1	145300	146589
GCA_902509535.1	GCA_902509535.1_00142	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LR735440.1	148767	149114
GCA_902509535.1	GCA_902509535.1_00216	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	LR735440.1	231211	231639
GCA_902509535.1	GCA_902509535.1_01311	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	LR735440.1	1316548	1317045
GCA_902509535.1	GCA_902509535.1_02517	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	LR735441.1	9689	11128
GCA_902509535.1	GCA_902509535.1_02519	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	LR735441.1	12045	12605
GCA_902509535.1	GCA_902509535.1_02520	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	LR735441.1	12789	14333
GCA_902509535.1	GCA_902509535.1_02524	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	459	459	100.00	99.78	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	LR735442.1	1107	2486
GCA_902509535.1	GCA_902509535.1_02529	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LR735442.1	5190	6035
GCA_902509535.1	GCA_902509535.1_02530	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LR735442.1	6142	7899
GCA_902509535.1	GCA_902509535.1_02531	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LR735442.1	7889	8269
GCA_024295745.1	GCA_024295745.1_00210	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOK010000001.1	205641	206858
GCA_024295745.1	GCA_024295745.1_00211	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOK010000001.1	206978	208441
GCA_024295745.1	GCA_024295745.1_00216	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOK010000001.1	210182	210610
GCA_024295745.1	GCA_024295745.1_01356	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCOK010000003.1	224935	226830
GCA_024295745.1	GCA_024295745.1_01397	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCOK010000004.1	20818	22542
GCA_024295745.1	GCA_024295745.1_01398	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCOK010000004.1	22544	24280
GCA_024295745.1	GCA_024295745.1_01724	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCOK010000006.1	57371	59290
GCA_002916785.1	GCA_002916785.1_00948	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	199	302	63.91	59.49	195	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	MTBE01000016.1	73559	74158
GCA_002916785.1	GCA_002916785.1_02777	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.05	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	MTBE01000038.1	1648	4497
GCA_002916785.1	GCA_002916785.1_02780	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	91.10	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	MTBE01000038.1	7849	8289
GCA_002916785.1	GCA_002916785.1_02781	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	576	571	99.30	90.83	567	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	MTBE01000038.1	8293	10023
GCA_002916785.1	GCA_002916785.1_02782	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	91.52	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	MTBE01000038.1	10004	10501
GCA_023110375.1	GCA_023110375.1_00757	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDVV010000001.1	248640	249857
GCA_023110375.1	GCA_023110375.1_00758	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDVV010000001.1	249977	251440
GCA_023110375.1	GCA_023110375.1_00898	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	329	399	82.46	98.48	329	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JALDVV010000001.1	398422	399411
GCA_023110375.1	GCA_023110375.1_01655	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALDVV010000005.1	61160	62818
GCA_002763695.1	GCA_002763695.1_01496	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP024700.1	1481702	1483621
GCA_009738245.1	GCA_009738245.1_01271	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP018189.1	1394930	1395667
GCA_003465965.1	GCA_003465965.1_01674	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	QSBH01000006.1	1303	1797
GCA_003465965.1	GCA_003465965.1_01954	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	QSBH01000009.1	33372	35291
GCA_018917165.1	GCA_018917165.1_01804	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHLOC010000002.1	569978	571051
GCA_018917165.1	GCA_018917165.1_02007	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLOC010000003.1	178909	180198
GCA_018917165.1	GCA_018917165.1_02012	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHLOC010000003.1	182364	182711
GCA_018917165.1	GCA_018917165.1_02077	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLOC010000004.1	60501	61790
GCA_018917165.1	GCA_018917165.1_02095	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	69.57	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHLOC010000004.1	81278	81697
GCA_018917165.1	GCA_018917165.1_02101	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JAHLOC010000004.1	84834	85475
GCA_018917165.1	GCA_018917165.1_02181	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHLOC010000005.1	31052	31474
GCA_018917165.1	GCA_018917165.1_02395	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHLOC010000008.1	12476	12856
GCA_018917165.1	GCA_018917165.1_02396	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHLOC010000008.1	12846	14603
GCA_018917165.1	GCA_018917165.1_02397	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHLOC010000008.1	14710	15555
GCA_018917165.1	GCA_018917165.1_02421	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JAHLOC010000009.1	12503	13120
GCA_000614245.1	GCA_000614245.1_02692	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	BAKO01000003.1	175791	176981
GCA_009761735.1	GCA_009761735.1_01668	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	154	92.86	61.54	143	WP_015860243.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP033366.1	1700211	1700630
GCA_009761735.1	GCA_009761735.1_02172	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	263	266	97.74	57.69	260	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP033366.1	2233778	2234569
GCA_009761735.1	GCA_009761735.1_03468	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	275	269	96.28	53.96	265	WP_338424127.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP033366.1	3556303	3557130
GCA_019046945.1	GCA_019046945.1_00956	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP077224.1	947014	947442
GCA_900637625.1	GCA_900637625.1_00968	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	LR134385.1	1230637	1232115
GCA_900459425.1	GCA_900459425.1_00607	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UHFS01000002.1	445019	446677
GCA_900459425.1	GCA_900459425.1_01330	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	UHFS01000002.1	1226054	1227253
GCA_000191425.1	GCA_000191425.1_00788	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP002419.1	787598	788977
GCA_000191425.1	GCA_000191425.1_01533	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP002419.1	1548207	1549112
GCA_000191425.1	GCA_000191425.1_01663	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.06	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP002419.1	1686722	1687960
GCA_000191425.1	GCA_000191425.1_01664	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP002419.1	1688368	1689000
GCA_000191425.1	GCA_000191425.1_01666	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP002419.1	1689825	1691393
GCA_000191425.1	GCA_000191425.1_01854	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.83	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP002419.1	1893948	1895474
GCA_962713235.1	GCA_962713235.1_00017	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIXQ010000001.1	16683	18209
GCA_962713235.1	GCA_962713235.1_00268	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIXQ010000002.1	21407	22312
GCA_962713235.1	GCA_962713235.1_00496	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIXQ010000003.1	86045	86677
GCA_962713235.1	GCA_962713235.1_00497	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.15	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIXQ010000003.1	86930	88168
GCA_962713235.1	GCA_962713235.1_00708	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIXQ010000004.1	133276	134655
GCA_900156665.1	GCA_900156665.1_01941	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FTOF01000011.1	2059	3480
GCA_900156665.1	GCA_900156665.1_02189	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.54	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	FTOF01000021.1	2633	3487
GCA_014338595.1	GCA_014338595.1_01836	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	VKGS01000008.1	63084	63512
GCA_003351505.1	GCA_003351505.1_01549	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	94.83	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031244.1	1493606	1495000
GCA_900458255.1	GCA_900458255.1_00014	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	UHDA01000002.1	10707	12173
GCA_900458255.1	GCA_900458255.1_00213	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	91.84	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHDA01000001.1	193199	194491
GCA_900458255.1	GCA_900458255.1_00217	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UHDA01000001.1	198174	198521
GCA_900458255.1	GCA_900458255.1_00239	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	98.27	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	UHDA01000001.1	217312	218745
GCA_900458255.1	GCA_900458255.1_00281	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	142	150	89.33	55.22	134	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	UHDA01000001.1	257150	257578
GCA_900458255.1	GCA_900458255.1_01313	sal	Sal family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	HMM	543	543	100.00	69.43	543	WP_096809342.1	Sal family ABC-F type ribosomal protection protein	NF000169.2	Sal family ABC-F type ribosomal protection protein	UHDA01000001.1	1257899	1259530
GCA_900458255.1	GCA_900458255.1_01965	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.54	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	UHDA01000001.1	1936250	1937539
GCA_900458255.1	GCA_900458255.1_02113	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	85.05	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	UHDA01000001.1	2052283	2052606
GCA_900458255.1	GCA_900458255.1_02124	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	100.00	76.26	139	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	UHDA01000001.1	2059993	2060412
GCA_900458255.1	GCA_900458255.1_02421	fusF	fusidic acid resistance EF-G-binding protein FusF	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	PARTIALP	131	214	60.28	98.45	129	WP_063851267.1	fusidic acid resistance EF-G-binding protein FusF	NA	NA	UHDA01000001.1	2338281	2338676
GCA_900458255.1	GCA_900458255.1_02430	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	233	281	81.49	56.77	229	WP_000733274.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	UHDA01000001.1	2345141	2345842
GCA_000787195.2	GCA_000787195.2_00164	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016684.1	181977	182882
GCA_000787195.2	GCA_000787195.2_00291	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016684.1	317092	318330
GCA_000787195.2	GCA_000787195.2_00292	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016684.1	318734	319366
GCA_000787195.2	GCA_000787195.2_00294	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016684.1	320003	321571
GCA_000787195.2	GCA_000787195.2_00493	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016684.1	528713	530239
GCA_000787195.2	GCA_000787195.2_01561	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016684.1	1605333	1606712
GCA_024295385.1	GCA_024295385.1_00341	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JANCPN010000011.1	4309	5046
GCA_024295385.1	GCA_024295385.1_00352	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JANCPN010000011.1	14961	16880
GCA_024295385.1	GCA_024295385.1_00400	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPN010000016.1	1086	2303
GCA_024295385.1	GCA_024295385.1_00401	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPN010000016.1	2423	3886
GCA_001562215.1	GCA_001562215.1_00004	copA	laccase-like oxidase CopA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	623	623	100.00	98.88	623	ADR70747.1	laccase-like oxidase CopA	NA	NA	CP014274.1	2586	4457
GCA_001562215.1	GCA_001562215.1_00005	copB	copper-binding protein CopB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	425	422	100.00	94.59	425	ADR70748.1	copper-binding protein CopB	NA	NA	CP014274.1	4454	5731
GCA_001562215.1	GCA_001562215.1_00849	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	153	155	97.42	58.28	151	WP_262697082.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP014274.1	942897	943358
GCA_001562215.1	GCA_001562215.1_00962	blaCESS-1	extended-spectrum class A beta-lactamase CESS-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	297	297	100.00	100.00	297	WP_062166693.1	extended-spectrum class A beta-lactamase CESS-1	NF050797.1	CESS family extended-spectrum class A beta-lactamase	CP014274.1	1093034	1093927
GCA_001562215.1	GCA_001562215.1_01201	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	290	289	97.92	43.82	283	WP_063859390.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	CP014274.1	1386472	1387344
GCA_001562215.1	GCA_001562215.1_02645	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	276	141	96.45	58.82	136	AAB09628.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP014274.1	3026036	3026866
GCA_009378245.1	GCA_009378245.1_00267	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCI01000011.1	111834	112775
GCA_029851625.1	GCA_029851625.1_00132	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP114012.1	144787	145209
GCA_002797175.1	GCA_002797175.1_01818	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	PENH01000002.1	423050	424015
GCA_002797175.1	GCA_002797175.1_01822	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	PENH01000002.1	428217	430142
GCA_002797175.1	GCA_002797175.1_01844	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	PENH01000002.1	461136	461936
GCA_002797175.1	GCA_002797175.1_02211	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	PENH01000003.1	125057	125857
GCA_937889145.1	GCA_937889145.1_01601	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CALBEW010000063.1	3965	5890
GCA_008727815.1	GCA_008727815.1_00978	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP044230.1	942419	942847
GCA_008727815.1	GCA_008727815.1_01584	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.84	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CP044230.1	1547822	1549558
GCA_008727815.1	GCA_008727815.1_01585	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	554	574	96.52	97.29	554	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CP044230.1	1549560	1551224
GCA_022919195.1	GCA_022919195.1_00035	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP095090.1	38511	40517
GCA_022919195.1	GCA_022919195.1_00036	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP095090.1	40617	41603
GCA_022919195.1	GCA_022919195.1_00056	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP095090.1	58289	59578
GCA_022919195.1	GCA_022919195.1_00059	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP095090.1	61756	62103
GCA_022919195.1	GCA_022919195.1_00133	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP095090.1	148656	149084
GCA_022919195.1	GCA_022919195.1_00194	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP095090.1	221083	221733
GCA_022919195.1	GCA_022919195.1_00199	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_007410443.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP095090.1	227082	227816
GCA_022919195.1	GCA_022919195.1_00200	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP095090.1	228116	228976
GCA_022919195.1	GCA_022919195.1_00881	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP095090.1	912429	913274
GCA_022919195.1	GCA_022919195.1_00882	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP095090.1	913381	915138
GCA_022919195.1	GCA_022919195.1_00883	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP095090.1	915128	915508
GCA_022919195.1	GCA_022919195.1_02403	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP095090.1	2447474	2448208
GCA_022919195.1	GCA_022919195.1_02414	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP095090.1	2452156	2453796
GCA_022919195.1	GCA_022919195.1_02417	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP095090.1	2456630	2458069
GCA_022919195.1	GCA_022919195.1_02427	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP095090.1	2467053	2468597
GCA_022919195.1	GCA_022919195.1_02428	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP095090.1	2468782	2469342
GCA_022919195.1	GCA_022919195.1_02432	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP095090.1	2473099	2473479
GCA_022919195.1	GCA_022919195.1_02433	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	90.60	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP095090.1	2473469	2475226
GCA_022919195.1	GCA_022919195.1_02434	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	96.09	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP095090.1	2475333	2476178
GCA_022919195.1	GCA_022919195.1_02438	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP095090.1	2478334	2478975
GCA_022919195.1	GCA_022919195.1_02442	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP095090.1	2482940	2483338
GCA_022919195.1	GCA_022919195.1_02443	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP095090.1	2483561	2484304
GCA_022919195.1	GCA_022919195.1_02456	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP095090.1	2494701	2496080
GCA_001897265.1	GCA_001897265.1_02786	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	140	137	88.32	49.60	125	WP_012695486.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	MKSL01000050.1	35584	36006
GCA_009717635.1	GCA_009717635.1_00681	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMYY01000001.1	330658	331086
GCA_009717635.1	GCA_009717635.1_01466	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMYY01000003.1	245240	246964
GCA_009717635.1	GCA_009717635.1_01467	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.01	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMYY01000003.1	246966	248702
GCA_000191065.1	GCA_000191065.1_00209	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	GL872282.1	232000	233925
GCA_000191065.1	GCA_000191065.1_01143	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	GL872283.1	51525	52721
GCA_027671285.1	GCA_027671285.1_00273	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	187	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	JAQEAO010000110.1	1860	2423
GCA_027671285.1	GCA_027671285.1_00299	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	187	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	JAQEAO010000012.1	21	584
GCA_027671285.1	GCA_027671285.1_00418	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	99.84	98.75	638	WP_063856415.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAQEAO010000013.1	46206	48125
GCA_027671285.1	GCA_027671285.1_00596	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	486	492	100.00	68.50	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAQEAO010000017.1	41684	43144
GCA_027671285.1	GCA_027671285.1_01035	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	284	89.08	57.31	253	WP_006555379.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAQEAO010000027.1	17059	17958
GCA_027671285.1	GCA_027671285.1_01883	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	250	245	100.00	99.59	245	WP_002321849.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQEAO010000060.1	6291	7043
GCA_027671285.1	GCA_027671285.1_01884	aadE	aminoglycoside 6-adenylyltransferase AadE	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	288	288	100.00	100.00	288	WP_001255868.1	aminoglycoside 6-adenylyltransferase AadE	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAQEAO010000060.1	7669	8535
GCA_027671285.1	GCA_027671285.1_01988	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	100.00	43.09	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQEAO010000007.1	32051	32404
GCA_001073155.1	GCA_001073155.1_00306	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JVEE01000015.1	74082	76001
GCA_001073155.1	GCA_001073155.1_00632	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.01	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVEE01000022.1	31614	33350
GCA_001073155.1	GCA_001073155.1_00633	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVEE01000022.1	33352	35076
GCA_001073155.1	GCA_001073155.1_00824	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JVEE01000028.1	642	1070
GCA_000816205.1	GCA_000816205.1_00970	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP007522.1	1100918	1102837
GCA_022569275.1	GCA_022569275.1_00956	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKV010000001.1	945477	945896
GCA_022569275.1	GCA_022569275.1_01048	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKRKV010000001.1	1032976	1033356
GCA_022569275.1	GCA_022569275.1_01049	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKRKV010000001.1	1033346	1035103
GCA_022569275.1	GCA_022569275.1_01050	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKRKV010000001.1	1035210	1036055
GCA_022569275.1	GCA_022569275.1_02031	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKV010000002.1	725479	726771
GCA_022569275.1	GCA_022569275.1_02177	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	137	131	90.84	92.44	119	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKRKV010000002.1	883081	883494
GCA_022569275.1	GCA_022569275.1_02187	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKV010000002.1	891132	892205
GCA_022569275.1	GCA_022569275.1_02528	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	PARTIALP	140	213	64.79	100.00	138	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NA	NA	JAKRKV010000005.1	65220	65642
GCA_925293305.1	GCA_925293305.1_01788	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAKMBW010000026.1	21053	22948
GCA_925293305.1	GCA_925293305.1_02461	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CAKMBW010000072.1	485	2599
GCA_030848285.1	GCA_030848285.1_00202	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	301	93.36	38.08	281	WP_032494759.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP114597.1	238794	239675
GCA_001812505.1	GCA_001812505.1_01867	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV809174.1	184626	186050
GCA_024539915.1	GCA_024539915.1_00162	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	98.99	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JAFJMG010000001.1	182875	184656
GCA_024539915.1	GCA_024539915.1_00207	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	45.03	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFJMG010000002.1	47823	49247
GCA_021378665.1	GCA_021378665.1_02759	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP089333.1	3121529	3123448
GCA_000292225.1	GCA_000292225.1_03808	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	305	97.38	54.13	303	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	ALOX01000108.1	9409	10329
GCA_011682965.1	GCA_011682965.1_01531	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VCOZ01000027.1	4775	6556
GCA_011682965.1	GCA_011682965.1_02072	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VCOZ01000043.1	2413	3267
GCA_011682965.1	GCA_011682965.1_02073	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	VCOZ01000043.1	3432	5351
GCA_011682965.1	GCA_011682965.1_02079	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	VCOZ01000045.1	144	590
GCA_011682965.1	GCA_011682965.1_02207	aac(6)-Ia	aminoglycoside 6-N-acetyltransferase AAC(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	185	185	100.00	100.00	185	WP_013136949.1	aminoglycoside 6-N-acetyltransferase AAC(6)-Ia	NF033078.2	AAC(6)-Ia family aminoglycoside 6-N-acetyltransferase	VCOZ01000051.1	1883	2440
GCA_011682965.1	GCA_011682965.1_02208	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	291	263	100.00	100.00	263	WP_001206316.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	VCOZ01000051.1	2922	3797
GCA_011682965.1	GCA_011682965.1_02213	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.97	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VCOZ01000053.1	376	1797
GCA_011682965.1	GCA_011682965.1_02351	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	VCOZ01000060.1	188	535
GCA_011682965.1	GCA_011682965.1_02352	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	VCOZ01000060.1	529	1368
GCA_016889985.1	GCA_016889985.1_02624	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP069569.1	16464	17318
GCA_000789275.1	GCA_000789275.1_00262	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	267	268	99.63	62.59	270	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP010052.1	228556	229359
GCA_000789275.1	GCA_000789275.1_00304	mphK	macrolide 2-phosphotransferase MphK	core	AMR	AMR	MACROLIDE	TELITHROMYCIN/TYLOSIN	EXACTP	306	306	100.00	100.00	306	WP_003246254.1	macrolide 2-phosphotransferase MphK	NA	NA	CP010052.1	275845	276765
GCA_000789275.1	GCA_000789275.1_00644	vmlR	ABC-F type ribosomal protection protein VmlR	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOMYCIN/TIAMULIN/VIRGINIAMYCIN M	EXACTP	547	547	100.00	100.00	547	WP_003234144.1	ABC-F type ribosomal protection protein VmlR	NA	NA	CP010052.1	604744	606387
GCA_000789275.1	GCA_000789275.1_01962	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	144	140	100.00	75.00	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP010052.1	1916675	1917109
GCA_000789275.1	GCA_000789275.1_02067	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	309	98.06	66.99	306	WP_011053164.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	CP010052.1	2048545	2049465
GCA_000789275.1	GCA_000789275.1_02808	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	139	139	100.00	100.00	139	CAB14519.1	thioredoxin-dependent arsenate reductase	NA	NA	CP010052.1	2655334	2655753
GCA_000789275.1	GCA_000789275.1_02809	acr3	arsenite efflux transporter Acr3	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	346	346	100.00	100.00	346	CAB14520.2	arsenite efflux transporter Acr3	NA	NA	CP010052.1	2655765	2656805
GCA_000789275.1	GCA_000789275.1_02910	aadK	aminoglycoside 6-adenylyltransferase AadK	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	284	284	100.00	100.00	284	WP_003229862.1	aminoglycoside 6-adenylyltransferase AadK	NF000312.1	aminoglycoside 6-adenylyltransferase AadK	CP010052.1	2735694	2736548
GCA_000789275.1	GCA_000789275.1_04400	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	173	173	100.00	100.00	173	WP_003242546.1	streptothricin N-acetyltransferase SatA	NA	NA	CP010052.1	4185173	4185694
GCA_000789275.1	GCA_000789275.1_04403	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_003242953.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP010052.1	4187694	4189070
GCA_003369935.1	GCA_003369935.1_00269	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LGOY01000001.1	351711	353351
GCA_003369935.1	GCA_003369935.1_00493	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	LGOY01000001.1	624873	626351
GCA_003369935.1	GCA_003369935.1_01131	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	460	639	66.67	99.77	426	WP_063856111.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	LGOY01000003.1	176465	177847
GCA_001810165.1	GCA_001810165.1_01066	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV800120.1	453324	455243
GCA_902850355.2	GCA_902850355.2_00137	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	OU540594.1	118264	119001
GCA_902850355.2	GCA_902850355.2_00138	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.90	639	WP_004632336.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	OU540594.1	120108	122027
GCA_019915445.1	GCA_019915445.1_00483	mexA	multidrug efflux RND transporter periplasmic adaptor subunit MexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	383	383	100.00	100.00	383	AAA74436.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	NF033834.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	CP082822.1	496702	497853
GCA_019915445.1	GCA_019915445.1_00953	aph(3)-IIb	aminoglycoside O-phosphotransferase APH(3)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	268	268	100.00	99.63	268	WP_003113011.1	aminoglycoside O-phosphotransferase APH(3)-IIb	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP082822.1	960851	961657
GCA_019915445.1	GCA_019915445.1_00962	blaPDC-1	cephalosporin-hydrolyzing class C beta-lactamase PDC-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	397	397	100.00	100.00	397	WP_003101289.1	cephalosporin-hydrolyzing class C beta-lactamase PDC-1	NF000422.6	PDC family class C beta-lactamase	CP082822.1	974013	975206
GCA_019915445.1	GCA_019915445.1_02738	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP082822.1	2824509	2826197
GCA_019915445.1	GCA_019915445.1_02739	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP082822.1	2826208	2826495
GCA_019915445.1	GCA_019915445.1_02933	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	414	414	100.00	100.00	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP082822.1	3015834	3017078
GCA_019915445.1	GCA_019915445.1_03580	mexX	multidrug efflux RND transporter periplasmic adaptor subunit MexX	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	396	396	100.00	99.24	396	AAF14522.1	multidrug efflux RND transporter periplasmic adaptor subunit MexX	NA	NA	CP082822.1	3742217	3743407
GCA_019915445.1	GCA_019915445.1_04620	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	135	135	100.00	100.00	135	WP_003082280.1	FosA family fosfomycin resistance glutathione transferase	NF000094.1	FosA family fosfomycin resistance glutathione transferase	CP082822.1	4811006	4811413
GCA_019915445.1	GCA_019915445.1_05640	catB7	type B-4 chloramphenicol O-acetyltransferase CatB7	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	212	212	100.00	100.00	212	WP_003112709.1	type B-4 chloramphenicol O-acetyltransferase CatB7	NF000490.1	type B chloramphenicol O-acetyltransferase	CP082822.1	5786427	5787065
GCA_019915445.1	GCA_019915445.1_06823	blaOXA-847	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-847	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	262	262	100.00	100.00	262	WP_010793618.1	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-847	NF000432.2	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase	CP082822.1	7036044	7036832
GCA_000258205.1	GCA_000258205.1_00560	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	AJJQ01000011.1	168	1022
GCA_003469565.1	GCA_003469565.1_00159	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	QSKM01000001.1	154444	156180
GCA_003469565.1	GCA_003469565.1_00160	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	QSKM01000001.1	156182	157906
GCA_003469565.1	GCA_003469565.1_01421	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	91.58	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	QSKM01000003.1	68998	70461
GCA_003469565.1	GCA_003469565.1_01422	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_058621816.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	QSKM01000003.1	70582	71799
GCA_027665525.1	GCA_027665525.1_02812	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	494	99.60	65.04	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAQDEC010000040.1	11856	13334
GCA_027665525.1	GCA_027665525.1_04488	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	123	85.37	49.52	105	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQDEC010000086.1	16552	16911
GCA_003626005.1	GCA_003626005.1_01442	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZGP01000005.1	150398	151339
GCA_900478415.1	GCA_900478415.1_02125	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	105	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	LS483491.1	2082047	2082364
GCA_900478415.1	GCA_900478415.1_02126	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.83	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LS483491.1	2082361	2083650
GCA_900478415.1	GCA_900478415.1_02127	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	LS483491.1	2083668	2084063
GCA_000293035.1	GCA_000293035.1_00258	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.23	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	ALNK01000005.1	193117	194595
GCA_027693065.1	GCA_027693065.1_00358	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQEXR010000001.1	345201	345629
GCA_027693065.1	GCA_027693065.1_00531	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQEXR010000001.1	502240	503457
GCA_027693065.1	GCA_027693065.1_00532	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQEXR010000001.1	503577	505040
GCA_027693065.1	GCA_027693065.1_00951	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQEXR010000001.1	939881	941617
GCA_027693065.1	GCA_027693065.1_00952	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQEXR010000001.1	941619	943343
GCA_030223345.1	GCA_030223345.1_00039	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASORY010000010.1	43640	44050
GCA_916720355.1	GCA_916720355.1_00224	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAKAQW010000005.1	5434	6624
GCA_001866575.1	GCA_001866575.1_00796	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LLJH01000003.1	2279	2689
GCA_005890475.1	GCA_005890475.1_01135	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.49	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQC01000057.1	35112	36533
GCA_019426385.1	GCA_019426385.1_00250	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHLXT010000006.1	6803	8809
GCA_019426385.1	GCA_019426385.1_01040	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	JAHLXT010000018.1	4767	6335
GCA_019426385.1	GCA_019426385.1_01068	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHLXT010000019.1	20230	20610
GCA_019426385.1	GCA_019426385.1_01069	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHLXT010000019.1	20600	22357
GCA_019426385.1	GCA_019426385.1_01070	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHLXT010000019.1	22464	23309
GCA_019426385.1	GCA_019426385.1_01129	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAHLXT010000021.1	3483	5027
GCA_019426385.1	GCA_019426385.1_01130	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAHLXT010000021.1	5211	5771
GCA_019426385.1	GCA_019426385.1_01137	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAHLXT010000021.1	12526	14070
GCA_019426385.1	GCA_019426385.1_01662	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLXT010000031.1	2857	4149
GCA_019426385.1	GCA_019426385.1_01746	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLXT010000031.1	79188	80480
GCA_019426385.1	GCA_019426385.1_01747	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHLXT010000031.1	80498	80899
GCA_001298675.1	GCA_001298675.1_00333	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	120	120	99.17	50.00	120	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CYIG01000002.1	158704	159066
GCA_001298675.1	GCA_001298675.1_01517	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	288	302	90.73	58.12	277	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CYIG01000012.1	77769	78635
GCA_001298675.1	GCA_001298675.1_03874	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	76	91	80.22	57.53	73	BAA20336.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CYIG01000121.1	215	445
GCA_022689605.1	GCA_022689605.1_01007	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	209	281	74.38	98.09	209	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033103.1	class A beta-lactamase	JALCXD010000023.1	5876	6505
GCA_022689605.1	GCA_022689605.1_01008	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCXD010000026.1	255	2012
GCA_022689605.1	GCA_022689605.1_01009	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCXD010000026.1	2002	2382
GCA_022689605.1	GCA_022689605.1_01201	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXD010000002.1	185231	185650
GCA_022689605.1	GCA_022689605.1_01519	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXD010000003.1	46007	47299
GCA_022689605.1	GCA_022689605.1_01661	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXD010000003.1	204505	205578
GCA_024758345.1	GCA_024758345.1_00149	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.55	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP103094.1	175405	177330
GCA_024758345.1	GCA_024758345.1_00317	cfxA6	broad-spectrum class A beta-lactamase CfxA6	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	321	320	99.69	97.18	319	WP_117664257.1	broad-spectrum class A beta-lactamase CfxA6	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103094.1	360471	361436
GCA_024758345.1	GCA_024758345.1_02893	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	79.17	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103094.1	3565203	3566084
GCA_024758345.1	GCA_024758345.1_04317	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.10	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103094.1	5200870	5202201
GCA_024758345.1	GCA_024758345.1_04882	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	EXACTP	266	266	100.00	100.00	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP103094.1	5822022	5822822
GCA_024758345.1	GCA_024758345.1_05373	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	648	641	99.53	97.96	638	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103094.1	6412014	6413960
GCA_001697825.1	GCA_001697825.1_00616	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016670.1	623673	625199
GCA_001697825.1	GCA_001697825.1_00816	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016670.1	835643	837211
GCA_001697825.1	GCA_001697825.1_00818	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016670.1	838036	838668
GCA_001697825.1	GCA_001697825.1_00819	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016670.1	839076	840314
GCA_001697825.1	GCA_001697825.1_01657	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016670.1	1717395	1718774
GCA_000159995.1	GCA_000159995.1_00439	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	97.82	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	GG700643.1	419778	421703
GCA_003850105.1	GCA_003850105.1_00050	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	NWUB01000014.1	2702	3082
GCA_003850105.1	GCA_003850105.1_00051	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	NWUB01000014.1	3072	4829
GCA_003850105.1	GCA_003850105.1_00052	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NWUB01000014.1	4936	5781
GCA_003850105.1	GCA_003850105.1_00062	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	NWUB01000014.1	14195	15094
GCA_003850105.1	GCA_003850105.1_00063	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	NWUB01000014.1	15193	16659
GCA_003850105.1	GCA_003850105.1_00078	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.42	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	NWUB01000015.1	9996	11540
GCA_003850105.1	GCA_003850105.1_00079	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	NWUB01000015.1	11723	12283
GCA_003850105.1	GCA_003850105.1_00276	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	NWUB01000002.1	1154	1639
GCA_003850105.1	GCA_003850105.1_01172	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NWUB01000023.1	280533	280880
GCA_003850105.1	GCA_003850105.1_01176	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	NWUB01000023.1	284563	285855
GCA_003850105.1	GCA_003850105.1_01181	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	96.04	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	NWUB01000023.1	289631	290920
GCA_003850105.1	GCA_003850105.1_01182	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	NWUB01000023.1	290938	291339
GCA_003850105.1	GCA_003850105.1_01693	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.59	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	NWUB01000024.1	290576	291868
GCA_003850105.1	GCA_003850105.1_02553	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	NWUB01000004.1	2126	3505
GCA_003850105.1	GCA_003850105.1_02557	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	NWUB01000008.1	1180	1797
GCA_003939355.2	GCA_003939355.2_00980	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	98.74	79.08	392	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP078042.1	993240	994433
GCA_003939355.2	GCA_003939355.2_01197	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	92.36	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP078042.1	1204265	1204699
GCA_003939355.2	GCA_003939355.2_01198	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	79.43	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP078042.1	1205438	1205863
GCA_003939355.2	GCA_003939355.2_01199	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	95.37	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP078042.1	1205902	1207587
GCA_003939355.2	GCA_003939355.2_01200	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	120	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP078042.1	1207604	1207966
GCA_003939355.2	GCA_003939355.2_03166	dfrA44	trimethoprim-resistant dihydrofolate reductase DfrA44	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	170	170	100.00	100.00	170	WP_031380727.1	trimethoprim-resistant dihydrofolate reductase DfrA44	NA	NA	CP078043.1	22589	23101
GCA_003939355.2	GCA_003939355.2_03182	blaOXA	OXA-58 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	257	280	91.79	100.00	257	WP_002002480.1	carbapenem-hydrolyzing class D beta-lactamase OXA-58	NF012161.0	class D beta-lactamase	CP078043.1	35365	36138
GCA_003939355.2	GCA_003939355.2_03190	msr(E)	ABC-F type ribosomal protection protein Msr(E)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN	EXACTP	491	491	100.00	100.00	491	WP_000052512.1	ABC-F type ribosomal protection protein Msr(E)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP078043.1	43154	44629
GCA_003939355.2	GCA_003939355.2_03191	mph(E)	Mph(E) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EXACTP	294	294	100.00	100.00	294	WP_000155092.1	Mph(E) family macrolide 2-phosphotransferase	NF012158.1	Mph(E) family macrolide 2-phosphotransferase	CP078043.1	44685	45569
GCA_003939355.2	GCA_003939355.2_03199	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP078043.1	51018	51854
GCA_003939355.2	GCA_003939355.2_03200	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	233	267	75.66	100.00	202	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	CP078043.1	51854	52555
GCA_003939355.2	GCA_003939355.2_03201	aac(3)-IId	aminoglycoside N-acetyltransferase AAC(3)-IId	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	EXACTP	286	286	100.00	100.00	286	WP_000557454.1	aminoglycoside N-acetyltransferase AAC(3)-IId	NF033080.0	AAC(3)-II family aminoglycoside N-acetyltransferase	CP078043.1	52568	53428
GCA_003939355.2	GCA_003939355.2_03274	aph(3)-VIa	aminoglycoside O-phosphotransferase APH(3)-VIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	259	259	100.00	100.00	259	WP_000422636.1	aminoglycoside O-phosphotransferase APH(3)-VIa	NF033062.0	APH(3)-VI family aminoglycoside O-phosphotransferase	CP078043.1	121464	122243
GCA_003939355.2	GCA_003939355.2_03287	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP078043.1	132049	132888
GCA_003939355.2	GCA_003939355.2_03288	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP078043.1	132882	133229
GCA_003939355.2	GCA_003939355.2_03289	aac(6)-Ib	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	172	184	93.48	100.00	172	WP_003159191.1	aminoglycoside N-acetyltransferase AAC(6)-Ib4	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP078043.1	133398	133916
GCA_003939355.2	GCA_003939355.2_03290	arr-3	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	EXACTP	150	150	100.00	100.00	150	WP_001749986.1	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP078043.1	134091	134543
GCA_003939355.2	GCA_003939355.2_03296	aph(3)-VI	APH(3)-VI family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	259	259	100.00	100.00	259	WP_014386410.1	APH(3)-VI family aminoglycoside O-phosphotransferase	NF033062.0	APH(3)-VI family aminoglycoside O-phosphotransferase	CP078043.1	137786	138565
GCA_003939355.2	GCA_003939355.2_03298	blaNDM-1	subclass B1 metallo-beta-lactamase NDM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	270	270	100.00	100.00	270	WP_004201164.1	subclass B1 metallo-beta-lactamase NDM-1	NF000259.2	NDM family subclass B1 metallo-beta-lactamase	CP078043.1	139843	140655
GCA_003939355.2	GCA_003939355.2_03326	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	287	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP078043.1	165530	166393
GCA_003939355.2	GCA_003939355.2_03327	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP078043.1	166454	167257
GCA_003939355.2	GCA_003939355.2_03328	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP078043.1	167257	168093
GCA_003939355.2	GCA_003939355.2_03330	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	404	404	100.00	100.00	404	WP_000214119.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP078043.1	169049	170263
GCA_900454835.1	GCA_900454835.1_02485	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	UGTM01000001.1	1719771	1720967
GCA_003697165.2	GCA_003697165.2_00029	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.24	394	BAE77620.1	multidrug efflux MFS transporter EmrD	NA	NA	CP033092.2	24708	25892
GCA_003697165.2	GCA_003697165.2_00227	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	93.62	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP033092.2	234746	235171
GCA_003697165.2	GCA_003697165.2_00478	acrF	multidrug efflux RND transporter permease subunit AcrF	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1034	1034	100.00	99.52	1034	AAC76298.1	multidrug efflux RND transporter permease subunit AcrF	NA	NA	CP033092.2	469028	472132
GCA_003697165.2	GCA_003697165.2_00788	sslE	lipoprotein metalloprotease SslE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1520	1520	100.00	100.00	1520	ADE89421.1	lipoprotein metalloprotease SslE	NF037973.1	lipoprotein metalloprotease SslE	CP033092.2	782396	786958
GCA_003697165.2	GCA_003697165.2_00836	ireA	TonB-dependent siderophore receptor IreA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	682	682	100.00	100.00	682	ABJ02430.1	TonB-dependent siderophore receptor IreA	NA	NA	CP033092.2	831579	833627
GCA_003697165.2	GCA_003697165.2_00860	papA	P fimbria major subunit PapA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	182	184	100.00	83.15	184	ENA25238.1	P fimbria major subunit PapA	NA	NA	CP033092.2	854127	854675
GCA_003697165.2	GCA_003697165.2_00861	papH	P fimbrial minor subunit PapH	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	166	195	85.13	98.80	166	CAA43563.1	P fimbrial minor subunit PapH	NA	NA	CP033092.2	854825	855325
GCA_003697165.2	GCA_003697165.2_00862	papC	P fimbrial usher protein PapC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	839	836	100.00	96.43	841	CAA43564.1	P fimbrial usher protein PapC	NA	NA	CP033092.2	855375	857894
GCA_003697165.2	GCA_003697165.2_00866	papE	P fimbrial minor subunit PapE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	173	173	100.00	100.00	173	CAA43568.1	P fimbrial minor subunit PapE	NA	NA	CP033092.2	859890	860411
GCA_003697165.2	GCA_003697165.2_00867	papF	P fimbrial tip protein PapF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	166	167	100.00	91.62	167	CAA43569.1	P fimbrial tip protein PapF	NA	NA	CP033092.2	860486	860986
GCA_003697165.2	GCA_003697165.2_00868	papG-II	P fimbria tip G-adhesin PapG-II	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	336	337	100.00	98.81	337	AAA24293.1	P fimbria tip G-adhesin PapG-II	NA	NA	CP033092.2	861030	862040
GCA_003697165.2	GCA_003697165.2_02033	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.67	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP033092.2	2049521	2051323
GCA_003697165.2	GCA_003697165.2_02034	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.50	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP033092.2	2051310	2053112
GCA_003697165.2	GCA_003697165.2_02079	emrE	multidrug efflux SMR transporter EmrE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	110	110	100.00	98.18	110	CAA77936.1	multidrug efflux SMR transporter EmrE	NF042984.1	multidrug efflux SMR transporter EmrE	CP033092.2	2088751	2089083
GCA_003697165.2	GCA_003697165.2_02418	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	BLASTP	102	102	100.00	98.04	102	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP033092.2	2415089	2415397
GCA_003697165.2	GCA_003697165.2_02829	ariR	biofilm/acid-resistance regulator AriR	plus	STRESS	ACID	NA	NA	BLASTP	88	88	100.00	97.73	88	AAC74250.1	biofilm/acid-resistance regulator AriR	NA	NA	CP033092.2	2827654	2827920
GCA_003697165.2	GCA_003697165.2_02866	iss	increased serum survival lipoprotein Iss	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	97	97	100.00	100.00	97	ADN71659.1	increased serum survival lipoprotein Iss	NA	NA	CP033092.2	2860916	2861209
GCA_003697165.2	GCA_003697165.2_03702	fdeC	inverse autotransporter adhesin FdeC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1416	1416	100.00	100.00	1416	ABE05822.1	inverse autotransporter adhesin FdeC	NA	NA	CP033092.2	3685996	3690246
GCA_003697165.2	GCA_003697165.2_03721	vactox	vacuolating autotransporter toxin Vat	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1376	1376	100.00	100.00	1376	CAR01635.1	vacuolating autotransporter toxin Vat	NA	NA	CP033092.2	3709947	3714077
GCA_003697165.2	GCA_003697165.2_04081	mdtM	multidrug efflux MFS transporter MdtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	100.00	97.56	410	AAC77293.1	multidrug efflux MFS transporter MdtM	NA	NA	CP033092.2	4077247	4078479
GCA_003697165.2	GCA_003697165.2_04302	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	377	377	100.00	98.94	377	AAZ85965.1	cephalosporin-hydrolyzing class C beta-lactamase EC-5	NF000185.2	BlaEC family class C beta-lactamase	CP033092.2	4295543	4296676
GCA_003697165.2	GCA_003697165.2_04672	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	100.00	99.67	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	CP033092.2	4665259	4666161
GCA_003697165.2	GCA_003697165.2_04935	iss	increased serum survival lipoprotein Iss	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	97	97	100.00	100.00	97	ADR26561.1	increased serum survival lipoprotein Iss	NA	NA	CP033091.2	23203	23496
GCA_003697165.2	GCA_003697165.2_04939	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	99.73	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP033091.2	26642	27757
GCA_003697165.2	GCA_003697165.2_04940	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	100.00	99.51	1219	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP033091.2	27897	31556
GCA_003697165.2	GCA_003697165.2_04941	iroD	catecholate siderophore esterase IroD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	409	409	100.00	99.76	409	ACJ63529.1	catecholate siderophore esterase IroD	NA	NA	CP033091.2	31660	32889
GCA_003697165.2	GCA_003697165.2_04942	iroE	catecholate siderophore esterase IroE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	318	318	100.00	99.69	318	ACJ63530.1	catecholate siderophore esterase IroE	NA	NA	CP033091.2	32974	33930
GCA_003697165.2	GCA_003697165.2_04943	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	725	725	100.00	99.86	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	CP033091.2	33975	36152
GCA_003697165.2	GCA_003697165.2_04949	cvaB	colicin V export peptidase/ABC transporter CvaB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	698	698	100.00	100.00	698	CAA40744.1	colicin V export peptidase/ABC transporter CvaB	NA	NA	CP033091.2	41331	43427
GCA_003697165.2	GCA_003697165.2_04950	cvaC	colicin V	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	103	103	100.00	100.00	103	CAA40746.1	colicin V	NA	NA	CP033091.2	43597	43908
GCA_003697165.2	GCA_003697165.2_05040	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	733	731	99.73	89.71	729	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	CP033091.2	113600	115801
GCA_003697165.2	GCA_003697165.2_05041	iucD	NADPH-dependent L-lysine N(6)-monooxygenase IucD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	425	445	95.51	97.65	425	AAD44749.1	NADPH-dependent L-lysine N(6)-monooxygenase IucD	NA	NA	CP033091.2	115883	117160
GCA_003697165.2	GCA_003697165.2_05042	iucC	NIS family aerobactin synthetase IucC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	580	580	100.00	97.59	580	AAN82073.1	NIS family aerobactin synthetase IucC	NA	NA	CP033091.2	117157	118899
GCA_003697165.2	GCA_003697165.2_05043	iucB	N(6)-hydroxylysine O-acetyltransferase IucB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	95.87	315	AAN82074.1	N(6)-hydroxylysine O-acetyltransferase IucB	NA	NA	CP033091.2	118899	119846
GCA_003697165.2	GCA_003697165.2_05044	iucA	aerobactin synthase IucA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	574	576	100.00	95.31	576	EGI25746.1	aerobactin synthase IucA	NA	NA	CP033091.2	119847	121571
GCA_030015085.1	GCA_030015085.1_01892	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	SSCI01000013.1	21512	22453
GCA_019731485.1	GCA_019731485.1_00685	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAASJD010000019.1	1277	1657
GCA_019731485.1	GCA_019731485.1_00686	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	543	585	92.82	98.71	543	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAASJD010000019.1	1647	3278
GCA_019731485.1	GCA_019731485.1_01104	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAASJD010000022.1	1615	2460
GCA_019731485.1	GCA_019731485.1_01221	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	51.72	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAASJD010000003.1	116353	117405
GCA_019731485.1	GCA_019731485.1_01263	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAASJD010000003.1	162816	163163
GCA_019731485.1	GCA_019731485.1_01268	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAASJD010000003.1	166769	168058
GCA_019731485.1	GCA_019731485.1_01408	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	75.36	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAASJD010000003.1	313828	314247
GCA_022819385.1	GCA_022819385.1_00661	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP089290.1	615870	617789
GCA_916439015.1	GCA_916439015.1_02387	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.06	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAKAFZ010000001.1	1932560	1934038
GCA_916439015.1	GCA_916439015.1_02438	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	459	639	71.83	100.00	459	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NA	NA	CAKAFZ010000001.1	1971557	1972936
GCA_001544215.1	GCA_001544215.1_00335	aac(6)-I	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	183	183	100.00	100.00	183	WP_016177698.1	aminoglycoside 6-N-acetyltransferase	NF000165.3	aminoglycoside 6-N-acetyltransferase	BCQB01000003.1	80985	81536
GCA_001544215.1	GCA_001544215.1_01071	copB	copper/silver-translocating P-type ATPase CopB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	756	745	95.57	84.39	724	AFM70730.1	copper/silver-translocating P-type ATPase CopB	NA	NA	BCQB01000012.1	29436	31706
GCA_000241915.1	GCA_000241915.1_00170	srtB	class B sortase SrtB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	329	329	100.00	93.62	329	CAE48738.1	class B sortase SrtB	NA	NA	CP003208.1	157091	158080
GCA_000241915.1	GCA_000241915.1_00172	srtC	class C sortase SrtC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	97.12	312	CAE48741.1	class C sortase SrtC	NA	NA	CP003208.1	160191	161129
GCA_000241915.1	GCA_000241915.1_00173	spaE	SpaD fimbrial minor subunit SpaE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	270	263	100.00	98.48	263	CAE48742.1	SpaD fimbrial minor subunit SpaE	NA	NA	CP003208.1	161101	161913
GCA_946222715.1	GCA_946222715.1_00469	vga	Vga family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	HMM	524	522	99.81	55.09	521	WP_012779620.1	Vga family ABC-F type ribosomal protection protein	NF000170.2	Vga family ABC-F type ribosomal protection protein	CAMIAL010000005.1	28389	29963
GCA_946222715.1	GCA_946222715.1_02027	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAMIAL010000079.1	1500	3140
GCA_946222715.1	GCA_946222715.1_02065	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CAMIAL010000091.1	243	986
GCA_946222715.1	GCA_946222715.1_02066	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CAMIAL010000091.1	1209	1607
GCA_030176795.1	GCA_030176795.1_00904	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	PARTIALP	183	279	65.59	99.45	183	WP_000259018.1	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	JASNVH010000021.1	18332	18883
GCA_030176795.1	GCA_030176795.1_00907	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASNVH010000021.1	20483	21658
GCA_030176795.1	GCA_030176795.1_00936	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVH010000029.1	319	1173
GCA_004166885.1	GCA_004166885.1_00294	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RCYU01000001.1	290690	291118
GCA_012926855.1	GCA_012926855.1_00557	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JABBMG010000003.1	60473	61762
GCA_012926855.1	GCA_012926855.1_00844	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JABBMG010000009.1	17401	17781
GCA_012926855.1	GCA_012926855.1_00845	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JABBMG010000009.1	17771	19528
GCA_012926855.1	GCA_012926855.1_00846	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JABBMG010000009.1	19635	20480
GCA_012926855.1	GCA_012926855.1_00897	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JABBMG010000012.1	2515	4521
GCA_012926855.1	GCA_012926855.1_00898	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JABBMG010000012.1	4621	6378
GCA_012926855.1	GCA_012926855.1_00899	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JABBMG010000012.1	6378	6749
GCA_012926855.1	GCA_012926855.1_01229	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JABBMG010000013.1	351919	352992
GCA_012926855.1	GCA_012926855.1_01270	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JABBMG010000013.1	406395	406817
GCA_012926855.1	GCA_012926855.1_01288	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JABBMG010000015.1	4846	6390
GCA_012926855.1	GCA_012926855.1_01289	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JABBMG010000015.1	6574	7134
GCA_012926855.1	GCA_012926855.1_01296	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JABBMG010000016.1	3643	4425
GCA_012926855.1	GCA_012926855.1_01297	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	228	243	100.00	93.83	243	WP_001072201.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JABBMG010000016.1	4551	5237
GCA_012926855.1	GCA_012926855.1_01299	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JABBMG010000017.1	236	979
GCA_012926855.1	GCA_012926855.1_01300	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JABBMG010000017.1	1196	1600
GCA_012926855.1	GCA_012926855.1_01902	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JABBMG010000029.1	32	517
GCA_012926855.1	GCA_012926855.1_02137	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JABBMG010000032.1	48	1487
GCA_013315135.1	GCA_013315135.1_00685	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JABUHE010000001.1	917082	918560
GCA_019329725.1	GCA_019329725.1_00091	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073863.1	92314	94320
GCA_019329725.1	GCA_019329725.1_00092	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073863.1	94420	96177
GCA_019329725.1	GCA_019329725.1_00093	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073863.1	96177	96548
GCA_019329725.1	GCA_019329725.1_00139	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073863.1	135514	135852
GCA_019329725.1	GCA_019329725.1_00140	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073863.1	135910	137553
GCA_019329725.1	GCA_019329725.1_00141	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073863.1	137635	138285
GCA_019329725.1	GCA_019329725.1_00151	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073863.1	147071	148369
GCA_019329725.1	GCA_019329725.1_00154	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073863.1	150538	150885
GCA_019329725.1	GCA_019329725.1_00231	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073863.1	233523	233759
GCA_019329725.1	GCA_019329725.1_00282	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073863.1	291557	292624
GCA_019329725.1	GCA_019329725.1_01775	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073863.1	1807687	1808067
GCA_019329725.1	GCA_019329725.1_01776	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073863.1	1808057	1809814
GCA_019329725.1	GCA_019329725.1_01777	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073863.1	1809921	1810766
GCA_019329725.1	GCA_019329725.1_01798	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073863.1	1829586	1830227
GCA_019329725.1	GCA_019329725.1_01919	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073863.1	1905855	1907294
GCA_019329725.1	GCA_019329725.1_01922	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073863.1	1909050	1909535
GCA_019329725.1	GCA_019329725.1_02748	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073864.1	472	1032
GCA_019329725.1	GCA_019329725.1_02761	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	PARTIALP	390	514	75.88	99.74	390	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NA	NA	CP073864.1	12313	13485
GCA_022569095.1	GCA_022569095.1_00163	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKN010000001.1	158366	159439
GCA_022569095.1	GCA_022569095.1_00296	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKN010000001.1	303816	305108
GCA_022569095.1	GCA_022569095.1_01257	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKN010000002.1	242918	243337
GCA_900539075.1	GCA_900539075.1_00158	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	UQAS01000002.1	73717	75636
GCA_900539075.1	GCA_900539075.1_00900	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	125	120	100.00	47.20	125	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	UQAS01000021.1	7445	7822
GCA_013425995.1	GCA_013425995.1_01904	blaCSA	CSA family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOTHIN	BLASTP	375	375	100.00	98.67	375	WP_004384957.1	class C beta-lactamase CSA-2	NF033698.1	CSA family class C beta-lactamase	CP059045.1	2030212	2031339
GCA_013425995.1	GCA_013425995.1_01968	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	95.83	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP059045.1	2095070	2095648
GCA_013425995.1	GCA_013425995.1_01972	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	193	193	100.00	93.78	193	AAA86846.1	tellurium resistance-associated protein TerZ	NA	NA	CP059045.1	2098395	2098976
GCA_013425995.1	GCA_013425995.1_01979	terW	tellurium resistance protein TerW	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	155	155	100.00	99.35	155	AAC44736.1	tellurium resistance protein TerW	NA	NA	CP059045.1	2105546	2106013
GCA_013425995.1	GCA_013425995.1_02111	fos	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	100.00	88.15	135	WP_015741374.1	FosA family fosfomycin resistance glutathione transferase	NF000339.2	FosA family fosfomycin resistance glutathione transferase	CP059045.1	2229959	2230369
GCA_013425995.1	GCA_013425995.1_02547	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	142	141	99.29	80.71	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP059045.1	2664529	2664957
GCA_013425995.1	GCA_013425995.1_03950	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	86.96	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP059045.1	4168468	4169370
GCA_007990445.1	GCA_007990445.1_00488	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	92.48	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AP019841.1	485177	486655
GCA_009496235.1	GCA_009496235.1_00616	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	WIJF01000001.1	230902	232821
GCA_009496235.1	GCA_009496235.1_00833	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJF01000002.1	110318	111517
GCA_009496235.1	GCA_009496235.1_00973	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WIJF01000002.1	256700	258163
GCA_009496235.1	GCA_009496235.1_00974	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WIJF01000002.1	258283	259500
GCA_000160195.1	GCA_000160195.1_00253	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	CM000952.1	249590	251023
GCA_000160195.1	GCA_000160195.1_00275	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CM000952.1	269823	270218
GCA_000160195.1	GCA_000160195.1_00276	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CM000952.1	270236	271525
GCA_000160195.1	GCA_000160195.1_00277	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CM000952.1	271525	271839
GCA_000160195.1	GCA_000160195.1_00641	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CM000952.1	631479	632834
GCA_000160195.1	GCA_000160195.1_00835	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CM000952.1	855196	856554
GCA_000160195.1	GCA_000160195.1_00970	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CM000952.1	1003073	1004125
GCA_000160195.1	GCA_000160195.1_01005	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CM000952.1	1045233	1046762
GCA_000160195.1	GCA_000160195.1_01218	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CM000952.1	1270818	1271795
GCA_000160195.1	GCA_000160195.1_01219	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CM000952.1	1271797	1272744
GCA_000160195.1	GCA_000160195.1_01220	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CM000952.1	1273294	1274259
GCA_000160195.1	GCA_000160195.1_01315	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CM000952.1	1368503	1368922
GCA_000160195.1	GCA_000160195.1_01639	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CM000952.1	1671499	1671633
GCA_000160195.1	GCA_000160195.1_01664	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	98.72	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	CM000952.1	1689119	1689823
GCA_000160195.1	GCA_000160195.1_01733	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	257	257	100.00	98.05	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CM000952.1	1738553	1739326
GCA_000160195.1	GCA_000160195.1_01737	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CM000952.1	1741035	1741526
GCA_000160195.1	GCA_000160195.1_01742	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CM000952.1	1743741	1744091
GCA_000160195.1	GCA_000160195.1_01966	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.65	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CM000952.1	1914243	1914962
GCA_000160195.1	GCA_000160195.1_01967	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CM000952.1	1914997	1915725
GCA_000160195.1	GCA_000160195.1_01968	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CM000952.1	1915879	1916664
GCA_000160195.1	GCA_000160195.1_01969	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CM000952.1	1916703	1917458
GCA_000160195.1	GCA_000160195.1_01982	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.06	238	ABD30999.1	serine protease SplE	NA	NA	CM000952.1	1926441	1927157
GCA_000160195.1	GCA_000160195.1_02029	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CM000952.1	1966021	1967313
GCA_000160195.1	GCA_000160195.1_02054	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CM000952.1	1999141	1999986
GCA_000160195.1	GCA_000160195.1_02056	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	426	585	72.82	99.77	426	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	CM000952.1	2000569	2001849
GCA_000160195.1	GCA_000160195.1_02057	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CM000952.1	2001839	2002219
GCA_028326485.1	GCA_028326485.1_01716	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMMW010000007.1	4967	5698
GCA_028326485.1	GCA_028326485.1_01889	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMMW010000009.1	49644	51563
GCA_028609805.1	GCA_028609805.1_00021	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP063189.1	20874	21728
GCA_900079085.1	GCA_900079085.1_01022	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	85.77	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	FKLO01000004.1	14559	16037
GCA_024295925.1	GCA_024295925.1_00205	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPK010000001.1	191440	191868
GCA_024295925.1	GCA_024295925.1_00210	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPK010000001.1	193609	195072
GCA_024295925.1	GCA_024295925.1_00211	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPK010000001.1	195192	196409
GCA_024295925.1	GCA_024295925.1_00750	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCPK010000002.1	64686	66410
GCA_024295925.1	GCA_024295925.1_00751	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCPK010000002.1	66412	68148
GCA_024295925.1	GCA_024295925.1_01140	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCPK010000003.1	222671	224566
GCA_024295925.1	GCA_024295925.1_01302	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCPK010000004.1	137018	138937
GCA_002959715.1	GCA_002959715.1_01665	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	94.58	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	PUEQ01000003.1	1351746	1353077
GCA_002959715.1	GCA_002959715.1_02306	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	300	96.00	74.74	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	PUEQ01000003.1	2042596	2043486
GCA_000368885.1	GCA_000368885.1_00491	blaOXA-23	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-23	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	273	273	100.00	100.00	273	WP_001046004.1	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-23	NF000266.2	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase	KB849733.1	420380	421201
GCA_000368885.1	GCA_000368885.1_02499	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	397	97.98	77.38	389	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	KB849733.1	2548215	2549402
GCA_000368885.1	GCA_000368885.1_02732	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	287	285	97.54	40.49	284	WP_063864745.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	KB849733.1	2779257	2780120
GCA_000024925.1	GCA_000024925.1_01348	helR	RNA polymerase recycling motor ATPase HelR	plus	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	764	722	98.06	60.34	759	CCA59315.1	RNA polymerase recycling motor ATPase HelR	NF041254.1	RNA polymerase recycling motor ATPase HelR	CP001819.1	1529592	1531886
GCA_900475805.1	GCA_900475805.1_00939	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	LS483417.1	894140	895339
GCA_001228405.1	GCA_001228405.1_00857	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.55	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUDV01000004.1	124306	125598
GCA_001228405.1	GCA_001228405.1_00930	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.55	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUDV01000004.1	187751	189040
GCA_001228405.1	GCA_001228405.1_00931	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CUDV01000004.1	189058	189450
GCA_001228405.1	GCA_001228405.1_00950	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CUDV01000004.1	208801	209148
GCA_001228405.1	GCA_001228405.1_00954	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUDV01000004.1	212834	214123
GCA_001228405.1	GCA_001228405.1_01260	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	96.10	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CUDV01000006.1	119110	119727
GCA_001228405.1	GCA_001228405.1_01552	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CUDV01000008.1	124546	124926
GCA_001228405.1	GCA_001228405.1_01553	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CUDV01000008.1	124916	126673
GCA_001228405.1	GCA_001228405.1_01554	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CUDV01000008.1	126780	127625
GCA_001228405.1	GCA_001228405.1_02347	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	96.72	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CUDV01000021.1	7946	8314
GCA_003493685.1	GCA_003493685.1_01603	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQJW01000010.1	8517	9911
GCA_901482635.1	GCA_901482635.1_00114	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CABEEX010000003.1	82949	83371
GCA_901482635.1	GCA_901482635.1_00165	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CABEEX010000003.1	142569	143642
GCA_901482635.1	GCA_901482635.1_00948	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CABEEX010000003.1	888506	889795
GCA_901482635.1	GCA_901482635.1_02178	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CABEEX010000003.1	2108586	2108981
GCA_901482635.1	GCA_901482635.1_02179	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CABEEX010000003.1	2108998	2110290
GCA_901482635.1	GCA_901482635.1_02183	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABEEX010000003.1	2113973	2114320
GCA_003044425.1	GCA_003044425.1_00747	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	97.17	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	POWW01000002.1	225339	226718
GCA_003044425.1	GCA_003044425.1_02353	blaTEM-30	inhibitor-resistant broad-spectrum class A beta-lactamase TEM-30	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_021561477.1	inhibitor-resistant broad-spectrum class A beta-lactamase TEM-30	NF000531.2	TEM family class A beta-lactamase	POWW01000014.1	2329	3189
GCA_000373045.1	GCA_000373045.1_00260	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	83.54	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KB890259.1	273627	275105
GCA_015240415.1	GCA_015240415.1_00068	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP061536.1	79632	81272
GCA_020404345.1	GCA_020404345.1_00046	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAIZBY010000001.1	76254	78173
GCA_019929305.1	GCA_019929305.1_00165	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	402	399	100.00	90.23	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JAHZPF010000001.1	158809	160017
GCA_030229105.1	GCA_030229105.1_00164	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPHN010000015.1	248	1102
GCA_030229105.1	GCA_030229105.1_00173	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPHN010000015.1	8984	9835
GCA_030229105.1	GCA_030229105.1_00187	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPHN010000018.1	269	1444
GCA_009378425.1	GCA_009378425.1_00133	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCJL01000011.1	54733	55674
GCA_024295565.1	GCA_024295565.1_00452	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	59.85	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOY010000001.1	436674	437102
GCA_024295565.1	GCA_024295565.1_00458	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOY010000001.1	439632	441095
GCA_024295565.1	GCA_024295565.1_00459	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOY010000001.1	441215	442432
GCA_024295565.1	GCA_024295565.1_01142	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCOY010000002.1	445028	446752
GCA_024295565.1	GCA_024295565.1_01143	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCOY010000002.1	446754	448490
GCA_000016465.1	GCA_000016465.1_01169	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP000671.1	1141648	1143042
GCA_024401155.1	GCA_024401155.1_02494	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	144	100.00	63.19	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP038804.1	2697376	2697810
GCA_900475445.1	GCA_900475445.1_01120	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_063856112.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LS483383.1	1141151	1143070
GCA_013267595.1	GCA_013267595.1_00788	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP054010.1	1013632	1014432
GCA_013267595.1	GCA_013267595.1_02463	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP054011.1	1551440	1552240
GCA_013267595.1	GCA_013267595.1_02641	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP054011.1	1783189	1784379
GCA_026782085.1	GCA_026782085.1_00715	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKUVW010000004.1	304608	305036
GCA_009717815.1	GCA_009717815.1_00330	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMZH01000001.1	332057	333274
GCA_009717815.1	GCA_009717815.1_00331	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMZH01000001.1	333394	334857
GCA_009717815.1	GCA_009717815.1_00341	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMZH01000001.1	340453	340881
GCA_009717815.1	GCA_009717815.1_01437	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.01	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMZH01000005.1	90430	92166
GCA_009717815.1	GCA_009717815.1_01438	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMZH01000005.1	92168	93892
GCA_000187895.1	GCA_000187895.1_00452	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	DS990134.1	352649	354574
GCA_000187895.1	GCA_000187895.1_00918	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	297	300	95.33	49.31	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	DS990133.1	207678	208571
GCA_008693165.1	GCA_008693165.1_01267	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	272	284	96.13	56.41	273	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	VXKM01000005.1	124760	125578
GCA_902859005.1	GCA_902859005.1_01385	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	LR793272.1	1422958	1423695
GCA_902859005.1	GCA_902859005.1_01386	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LR793272.1	1424805	1426724
GCA_021496295.1	GCA_021496295.1_01963	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	96.98	76.36	385	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP045051.1	1966587	1967807
GCA_021496295.1	GCA_021496295.1_03142	blaOXA	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	274	274	100.00	96.35	274	WP_140423313.1	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-644	NF000417.2	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	CP045051.1	3194159	3194983
GCA_002022745.1	GCA_002022745.1_00115	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP019894.1	111399	112925
GCA_002022745.1	GCA_002022745.1_01852	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP019894.1	1892456	1893361
GCA_002022745.1	GCA_002022745.1_01985	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.60	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP019894.1	2053728	2054966
GCA_002022745.1	GCA_002022745.1_01986	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP019894.1	2055214	2055846
GCA_002022745.1	GCA_002022745.1_01988	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP019894.1	2056638	2058206
GCA_002104555.1	GCA_002104555.1_00134	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP020769.1	145653	146945
GCA_002104555.1	GCA_002104555.1_00291	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP020769.1	301396	301776
GCA_002104555.1	GCA_002104555.1_00292	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP020769.1	301766	303523
GCA_002104555.1	GCA_002104555.1_00293	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP020769.1	303630	304475
GCA_002104555.1	GCA_002104555.1_02078	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP020769.1	2076554	2076973
GCA_002104555.1	GCA_002104555.1_02626	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP020769.1	2616788	2617861
GCA_002104555.1	GCA_002104555.1_02636	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	137	131	90.84	92.44	119	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP020769.1	2625498	2625911
GCA_025309775.1	GCA_025309775.1_00011	aac(3)-IVb	aminoglycoside N-acetyltransferase AAC(3)-IVb	core	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	BLASTP	265	265	99.62	89.02	264	WP_149317372.1	aminoglycoside N-acetyltransferase AAC(3)-IVb	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	CP104386.1	12902	13699
GCA_025309775.1	GCA_025309775.1_00151	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.47	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP104386.1	155536	158385
GCA_025309775.1	GCA_025309775.1_01217	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	276	141	96.45	58.82	136	AAB09628.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP104386.1	1309529	1310359
GCA_025309775.1	GCA_025309775.1_01681	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP104386.1	1808386	1808820
GCA_025309775.1	GCA_025309775.1_01682	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP104386.1	1808892	1809242
GCA_025309775.1	GCA_025309775.1_01683	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP104386.1	1809255	1809530
GCA_025309775.1	GCA_025309775.1_01684	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP104386.1	1809602	1811287
GCA_025309775.1	GCA_025309775.1_01685	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP104386.1	1811305	1811670
GCA_025309775.1	GCA_025309775.1_01686	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP104386.1	1811667	1811903
GCA_025309775.1	GCA_025309775.1_03792	mcr-5.1	phosphoethanolamine--lipid A transferase MCR-5.1	core	AMR	AMR	COLISTIN	COLISTIN	ALLELEP	547	547	100.00	100.00	547	WP_053821788.1	phosphoethanolamine--lipid A transferase MCR-5.1	NF033463.1	MCR-5 family phosphoethanolamine--lipid A transferase	CP104387.1	542299	543942
GCA_025309775.1	GCA_025309775.1_04135	blaOXA	OXA-837 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	301	100.00	81.64	305	WP_148281568.1	OXA-837 family class D beta-lactamase	NF042983.1	OXA-837 family class D beta-lactamase	CP104387.1	938793	939710
GCA_025309775.1	GCA_025309775.1_05214	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	400	390	94.62	46.88	369	WP_063857697.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP104387.1	2172209	2173411
GCA_019329365.1	GCA_019329365.1_00092	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073827.1	90843	92849
GCA_019329365.1	GCA_019329365.1_00093	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073827.1	92949	94706
GCA_019329365.1	GCA_019329365.1_00094	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073827.1	94706	95077
GCA_019329365.1	GCA_019329365.1_00140	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073827.1	134043	134381
GCA_019329365.1	GCA_019329365.1_00141	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073827.1	134439	136082
GCA_019329365.1	GCA_019329365.1_00142	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073827.1	136164	136814
GCA_019329365.1	GCA_019329365.1_00152	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073827.1	145600	146898
GCA_019329365.1	GCA_019329365.1_00155	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073827.1	149067	149414
GCA_019329365.1	GCA_019329365.1_00232	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073827.1	232052	232288
GCA_019329365.1	GCA_019329365.1_00283	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073827.1	290086	291153
GCA_019329365.1	GCA_019329365.1_01776	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073827.1	1807063	1807443
GCA_019329365.1	GCA_019329365.1_01777	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073827.1	1807433	1809190
GCA_019329365.1	GCA_019329365.1_01778	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073827.1	1809297	1810142
GCA_019329365.1	GCA_019329365.1_01799	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073827.1	1828961	1829602
GCA_019329365.1	GCA_019329365.1_01920	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073827.1	1905230	1906669
GCA_019329365.1	GCA_019329365.1_01923	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073827.1	1908425	1908910
GCA_019329365.1	GCA_019329365.1_02758	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073828.1	7638	8198
GCA_019329365.1	GCA_019329365.1_02759	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073828.1	8383	9927
GCA_002114275.1	GCA_002114275.1_00054	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	459	459	100.00	99.78	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	NDWY01000001.1	62990	64369
GCA_002114275.1	GCA_002114275.1_00135	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.55	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	NDWY01000001.1	135349	136641
GCA_002114275.1	GCA_002114275.1_00306	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	200	281	69.40	95.90	195	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	NA	NDWY01000001.1	315407	316009
GCA_002114275.1	GCA_002114275.1_00307	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	NDWY01000001.1	316116	317873
GCA_002114275.1	GCA_002114275.1_00308	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	NDWY01000001.1	317863	318243
GCA_002114275.1	GCA_002114275.1_00961	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	NDWY01000001.1	936037	936678
GCA_002114275.1	GCA_002114275.1_01267	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	NDWY01000001.1	1228121	1228903
GCA_002114275.1	GCA_002114275.1_01268	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NDWY01000001.1	1229029	1229760
GCA_002114275.1	GCA_002114275.1_01443	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	NDWY01000001.1	1388466	1388789
GCA_002114275.1	GCA_002114275.1_01447	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	NDWY01000001.1	1390563	1392002
GCA_002114275.1	GCA_002114275.1_01827	str	streptomycin adenylyltransferase Str	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	282	282	100.00	100.00	282	WP_031916103.1	streptomycin adenylyltransferase Str	NF000062.1	streptomycin adenylyltransferase Str	NDWY01000001.1	1797887	1798735
GCA_002114275.1	GCA_002114275.1_02266	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	99.18	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	NDWY01000001.1	2213733	2214101
GCA_001697465.1	GCA_001697465.1_00186	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016652.1	198030	199598
GCA_001697465.1	GCA_001697465.1_00188	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016652.1	200423	201055
GCA_001697465.1	GCA_001697465.1_00189	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016652.1	201463	202701
GCA_001697465.1	GCA_001697465.1_00315	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016652.1	337073	337978
GCA_001697465.1	GCA_001697465.1_01027	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016652.1	1079553	1080932
GCA_001697465.1	GCA_001697465.1_02074	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016652.1	2148521	2150047
GCA_027682715.1	GCA_027682715.1_01643	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAQCZE010000004.1	12393	13358
GCA_027682715.1	GCA_027682715.1_01777	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAQCZE010000004.1	159112	161037
GCA_027682715.1	GCA_027682715.1_01894	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAQCZE010000005.1	109506	110702
GCA_002096975.1	GCA_002096975.1_00121	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP020768.1	136833	138125
GCA_002096975.1	GCA_002096975.1_01965	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP020768.1	1971563	1971982
GCA_002096975.1	GCA_002096975.1_02451	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP020768.1	2470075	2471148
GCA_000485885.1	GCA_000485885.1_00047	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP006838.1	48633	49415
GCA_000485885.1	GCA_000485885.1_00048	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP006838.1	49541	50272
GCA_000485885.1	GCA_000485885.1_00063	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	128	128	100.00	100.00	128	ADA79992.1	mercuric transport protein MerT	NA	NA	CP006838.1	62893	63279
GCA_000485885.1	GCA_000485885.1_00064	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP006838.1	63337	64980
GCA_000485885.1	GCA_000485885.1_00065	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	216	216	100.00	100.00	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP006838.1	65062	65712
GCA_000485885.1	GCA_000485885.1_00068	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	295	459	55.34	100.00	254	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NA	NA	CP006838.1	67412	68299
GCA_000485885.1	GCA_000485885.1_00078	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.70	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP006838.1	75274	77280
GCA_000485885.1	GCA_000485885.1_00079	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP006838.1	77380	79137
GCA_000485885.1	GCA_000485885.1_00080	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	67	123	54.47	100.00	67	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NA	NA	CP006838.1	79137	79340
GCA_000485885.1	GCA_000485885.1_00157	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100289.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP006838.1	160625	161983
GCA_000485885.1	GCA_000485885.1_00347	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP006838.1	383989	385344
GCA_000485885.1	GCA_000485885.1_00386	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP006838.1	418518	419129
GCA_000485885.1	GCA_000485885.1_00413	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP006838.1	441732	443651
GCA_000485885.1	GCA_000485885.1_00422	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP006838.1	453394	453891
GCA_000485885.1	GCA_000485885.1_00881	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.17	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP006838.1	910522	911250
GCA_000485885.1	GCA_000485885.1_00882	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	242	242	100.00	100.00	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP006838.1	911274	912002
GCA_000485885.1	GCA_000485885.1_01690	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP006838.1	1723529	1724281
GCA_000485885.1	GCA_000485885.1_01745	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP006838.1	1777774	1778505
GCA_000485885.1	GCA_000485885.1_01746	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP006838.1	1778631	1779413
GCA_000485885.1	GCA_000485885.1_01873	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP006838.1	1926000	1927292
GCA_000485885.1	GCA_000485885.1_01916	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP006838.1	1965278	1966000
GCA_000485885.1	GCA_000485885.1_01917	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP006838.1	1966125	1966832
GCA_000485885.1	GCA_000485885.1_01928	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP006838.1	1978560	1979543
GCA_000485885.1	GCA_000485885.1_01929	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.36	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP006838.1	1979545	1980480
GCA_000485885.1	GCA_000485885.1_02089	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP006838.1	2109080	2109430
GCA_000485885.1	GCA_000485885.1_02093	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP006838.1	2110926	2111417
GCA_000485885.1	GCA_000485885.1_02097	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP006838.1	2113126	2113899
GCA_000485885.1	GCA_000485885.1_02174	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP006838.1	2171372	2171506
GCA_000485885.1	GCA_000485885.1_02227	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP006838.1	2208965	2210404
GCA_000485885.1	GCA_000485885.1_02234	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP006838.1	2213645	2214439
GCA_000485885.1	GCA_000485885.1_02432	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP006838.1	2395391	2396833
GCA_000485885.1	GCA_000485885.1_02607	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP006838.1	2548641	2549060
GCA_000485885.1	GCA_000485885.1_02695	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP006838.1	2639631	2640596
GCA_000485885.1	GCA_000485885.1_02696	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP006838.1	2641164	2642111
GCA_000485885.1	GCA_000485885.1_02697	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP006838.1	2642113	2643090
GCA_000485885.1	GCA_000485885.1_02769	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	910	1115	81.61	99.56	910	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP006838.1	2716498	2719230
GCA_000485885.1	GCA_000485885.1_02867	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP006838.1	2822388	2822768
GCA_000485885.1	GCA_000485885.1_02868	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP006838.1	2822758	2824515
GCA_000485885.1	GCA_000485885.1_02869	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP006838.1	2824622	2825467
GCA_000485885.1	GCA_000485885.1_02937	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP006838.1	2896299	2897828
GCA_000485885.1	GCA_000485885.1_02972	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	294	350	81.71	98.95	286	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP006838.1	2940157	2941041
GCA_000485885.1	GCA_000485885.1_03040	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	216	216	100.00	100.00	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP006839.1	13290	13940
GCA_000485885.1	GCA_000485885.1_03041	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP006839.1	14022	15665
GCA_000485885.1	GCA_000485885.1_03042	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	128	128	100.00	100.00	128	ADA79992.1	mercuric transport protein MerT	NA	NA	CP006839.1	15723	16109
GCA_000485885.1	GCA_000485885.1_03049	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	EXACTP	122	122	100.00	100.00	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP006839.1	21967	22335
GCA_000485885.1	GCA_000485885.1_03054	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP006839.1	24926	25486
GCA_000485885.1	GCA_000485885.1_03055	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP006839.1	25670	27214
GCA_963394875.1	GCA_963394875.1_00027	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPG010000001.1	22040	23419
GCA_963394875.1	GCA_963394875.1_00297	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPG010000002.1	67721	68959
GCA_963394875.1	GCA_963394875.1_00298	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJPG010000002.1	68976	69839
GCA_963394875.1	GCA_963394875.1_01104	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPG010000010.1	67882	69408
GCA_938042165.1	GCA_938042165.1_00511	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CALIRU010000053.1	555	1370
GCA_001815285.1	GCA_001815285.1_00001	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV820058.1	110	2029
GCA_001815285.1	GCA_001815285.1_00824	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV820085.1	258	1112
GCA_030466425.1	GCA_030466425.1_00476	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAGQFU010000001.1	479129	480592
GCA_030466425.1	GCA_030466425.1_00477	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAGQFU010000001.1	480712	481929
GCA_030466425.1	GCA_030466425.1_00543	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAGQFU010000001.1	540296	540724
GCA_008330745.1	GCA_008330745.1_00454	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP021516.1	457755	459134
GCA_008330745.1	GCA_008330745.1_01170	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP021516.1	1207115	1208020
GCA_008330745.1	GCA_008330745.1_01299	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.57	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP021516.1	1346758	1347996
GCA_008330745.1	GCA_008330745.1_01300	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP021516.1	1348400	1349032
GCA_008330745.1	GCA_008330745.1_01302	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP021516.1	1349857	1351425
GCA_008330745.1	GCA_008330745.1_01493	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP021516.1	1556074	1557600
GCA_009378595.1	GCA_009378595.1_01228	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCJR01000004.1	54840	55781
GCA_000931575.1	GCA_000931575.1_00490	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP007470.1	497447	498841
GCA_015263535.1	GCA_015263535.1_00864	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	JABZQQ010000028.1	3623	5002
GCA_900240195.1	GCA_900240195.1_00082	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	LT963441.1	81136	81537
GCA_900240195.1	GCA_900240195.1_00083	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LT963441.1	81555	82844
GCA_900240195.1	GCA_900240195.1_00089	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LT963441.1	88056	89348
GCA_900240195.1	GCA_900240195.1_00093	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	44.63	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LT963441.1	91513	91860
GCA_900240195.1	GCA_900240195.1_00164	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.55	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LT963441.1	155652	156944
GCA_900240195.1	GCA_900240195.1_01224	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	LT963441.1	1176006	1176788
GCA_900240195.1	GCA_900240195.1_01225	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	LT963441.1	1176914	1177645
GCA_900240195.1	GCA_900240195.1_01719	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LT963441.1	1683233	1683613
GCA_900240195.1	GCA_900240195.1_01720	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LT963441.1	1683603	1685360
GCA_900240195.1	GCA_900240195.1_01721	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LT963441.1	1685467	1686312
GCA_900240195.1	GCA_900240195.1_02473	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	LT963441.1	2390268	2390591
GCA_900240195.1	GCA_900240195.1_02492	str	streptomycin adenylyltransferase Str	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	282	282	100.00	100.00	282	WP_031916103.1	streptomycin adenylyltransferase Str	NF000062.1	streptomycin adenylyltransferase Str	LT963441.1	2406394	2407242
GCA_947096245.1	GCA_947096245.1_00244	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAMUQP010000007.1	14234	15874
GCA_030228465.1	GCA_030228465.1_00193	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JASPBQ010000013.1	16520	16948
GCA_015274065.1	GCA_015274065.1_00306	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPX010000001.1	287438	288730
GCA_015274065.1	GCA_015274065.1_02428	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JACGPX010000010.1	8884	9198
GCA_015274065.1	GCA_015274065.1_02429	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPX010000010.1	9198	10487
GCA_015274065.1	GCA_015274065.1_02430	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACGPX010000010.1	10505	10906
GCA_015274065.1	GCA_015274065.1_02452	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGPX010000010.1	35898	36278
GCA_015274065.1	GCA_015274065.1_02453	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGPX010000010.1	36268	38025
GCA_015274065.1	GCA_015274065.1_02454	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGPX010000010.1	38132	38977
GCA_015274065.1	GCA_015274065.1_02575	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGPX010000017.1	1147	1632
GCA_014267235.1	GCA_014267235.1_00636	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACMVK010000002.1	574802	575875
GCA_014267235.1	GCA_014267235.1_00686	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JACMVK010000002.1	635075	635497
GCA_014267235.1	GCA_014267235.1_01157	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVK010000004.1	60402	61691
GCA_014267235.1	GCA_014267235.1_01464	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMVK010000007.1	33689	34036
GCA_014267235.1	GCA_014267235.1_01468	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVK010000007.1	37719	39011
GCA_014267235.1	GCA_014267235.1_01469	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACMVK010000007.1	39028	39423
GCA_014267235.1	GCA_014267235.1_01529	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMVK010000009.1	14002	14382
GCA_014267235.1	GCA_014267235.1_01530	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMVK010000009.1	14372	16129
GCA_014267235.1	GCA_014267235.1_01531	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMVK010000009.1	16236	17081
GCA_003425565.1	GCA_003425565.1_01626	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031678.1	1616419	1617813
GCA_026783785.1	GCA_026783785.1_00282	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKUYZ010000011.1	109262	110920
GCA_003626355.1	GCA_003626355.1_00121	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHL01000001.1	101713	102654
GCA_002591175.1	GCA_002591175.1_00028	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP023966.1	29474	30547
GCA_002591175.1	GCA_002591175.1_00750	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP023966.1	761603	762892
GCA_002591175.1	GCA_002591175.1_02369	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP023966.1	2357281	2358570
GCA_002591175.1	GCA_002591175.1_02404	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	72.26	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP023966.1	2394081	2394503
GCA_002591175.1	GCA_002591175.1_02443	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP023967.1	23402	23782
GCA_002591175.1	GCA_002591175.1_02444	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP023967.1	23772	25529
GCA_002591175.1	GCA_002591175.1_02445	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP023967.1	25636	26481
GCA_946997855.1	GCA_946997855.1_00952	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAMPWW010000005.1	63931	65148
GCA_946997855.1	GCA_946997855.1_00953	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAMPWW010000005.1	65268	66731
GCA_022346265.1	GCA_022346265.1_00511	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDD010000001.1	56398	57252
GCA_022346265.1	GCA_022346265.1_00856	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JAKRDD010000024.1	145	1926
GCA_003471645.1	GCA_003471645.1_00258	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	633	641	96.72	99.19	620	WP_063856409.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	QRJS01000011.1	10	1911
GCA_003471645.1	GCA_003471645.1_02316	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	297	300	95.67	50.17	289	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	QRJS01000005.1	71239	72132
GCA_003471645.1	GCA_003471645.1_02402	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	93.61	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	QRJS01000051.1	71	871
GCA_026970895.1	GCA_026970895.1_02187	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	302	99.34	54.61	304	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP114201.1	2440980	2441891
GCA_026970895.1	GCA_026970895.1_02218	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	268	96.64	70.27	259	WP_114268491.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP114201.1	2479264	2480064
GCA_026970895.1	GCA_026970895.1_04255	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	275	94.91	59.77	261	WP_125064048.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP114201.1	4722915	4723697
GCA_000186465.1	GCA_000186465.1_00982	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.30	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	GL636091.1	1030054	1031778
GCA_000186465.1	GCA_000186465.1_00983	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.15	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	GL636091.1	1031780	1033516
GCA_002850375.1	GCA_002850375.1_01446	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP020618.1	1436943	1438232
GCA_002850375.1	GCA_002850375.1_02018	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP020618.1	1949768	1950613
GCA_002850375.1	GCA_002850375.1_02019	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP020618.1	1950720	1952477
GCA_002850375.1	GCA_002850375.1_02020	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP020618.1	1952467	1952847
GCA_002850375.1	GCA_002850375.1_02319	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	463	459	96.73	100.00	444	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP020618.1	2215453	2216844
GCA_001809525.1	GCA_001809525.1_00162	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV797887.1	157368	159008
GCA_030515925.1	GCA_030515925.1_01312	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.42	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100375.1	1397241	1398095
GCA_014217915.1	GCA_014217915.1_03067	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	308	310	97.42	46.08	306	WP_063857821.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP060120.1	3080275	3081201
GCA_003625545.1	GCA_003625545.1_01333	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZGN01000005.1	102985	103926
GCA_947255095.1	GCA_947255095.1_02034	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAMYFR010000024.1	21137	22558
GCA_947255095.1	GCA_947255095.1_02249	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.49	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CAMYFR010000038.1	77	1858
GCA_009495955.1	GCA_009495955.1_01563	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJD01000006.1	36919	38118
GCA_025150485.1	GCA_025150485.1_00978	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.02	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXSR010000178.1	582	1982
GCA_023147355.1	GCA_023147355.1_01404	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHXPG010000015.1	11080	12372
GCA_023147355.1	GCA_023147355.1_01408	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHXPG010000015.1	16055	16402
GCA_023147355.1	GCA_023147355.1_01769	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHXPG010000002.1	287414	288706
GCA_023147355.1	GCA_023147355.1_01815	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHXPG010000025.1	73	918
GCA_023147355.1	GCA_023147355.1_01816	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHXPG010000025.1	1025	2782
GCA_023147355.1	GCA_023147355.1_01817	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHXPG010000025.1	2772	3152
GCA_001066935.1	GCA_001066935.1_00385	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JUWU01000074.1	33311	34951
GCA_000177555.1	GCA_000177555.1_00126	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	ADGP01000033.1	119089	121008
GCA_000177555.1	GCA_000177555.1_00821	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	99.80	89.00	491	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	ADGP01000019.1	52793	54271
GCA_000722685.1	GCA_000722685.1_01255	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JPFV01000011.1	438298	440217
GCA_000722685.1	GCA_000722685.1_01285	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JPFV01000012.1	28167	29384
GCA_001018775.2	GCA_001018775.2_00099	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP026063.1	88710	89060
GCA_001018775.2	GCA_001018775.2_00104	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP026063.1	91272	91763
GCA_001018775.2	GCA_001018775.2_00181	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP026063.1	144099	144233
GCA_001018775.2	GCA_001018775.2_00326	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP026063.1	295954	297396
GCA_001018775.2	GCA_001018775.2_00498	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP026063.1	447744	448163
GCA_001018775.2	GCA_001018775.2_00582	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP026063.1	536495	537460
GCA_001018775.2	GCA_001018775.2_00583	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP026063.1	538026	538973
GCA_001018775.2	GCA_001018775.2_00584	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP026063.1	538975	539952
GCA_001018775.2	GCA_001018775.2_00661	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1371	1115	61.43	99.85	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP026063.1	618320	622435
GCA_001018775.2	GCA_001018775.2_00807	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP026063.1	778387	779916
GCA_001018775.2	GCA_001018775.2_00841	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP026063.1	822544	823596
GCA_001018775.2	GCA_001018775.2_00967	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP026063.1	963316	964674
GCA_001018775.2	GCA_001018775.2_01165	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP026063.1	1192309	1193664
GCA_001018775.2	GCA_001018775.2_01202	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	95.57	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP026063.1	1226972	1227583
GCA_001018775.2	GCA_001018775.2_01731	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP026063.1	1736984	1737475
GCA_001018775.2	GCA_001018775.2_02610	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP026063.1	2678037	2679329
GCA_001018775.2	GCA_001018775.2_02649	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	CP026063.1	2710462	2711184
GCA_001018775.2	GCA_001018775.2_02650	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP026063.1	2711309	2712016
GCA_001018775.2	GCA_001018775.2_02655	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP026063.1	2716147	2717130
GCA_001018775.2	GCA_001018775.2_02656	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP026063.1	2717132	2718067
GCA_001018775.2	GCA_001018775.2_02664	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP026063.1	2724269	2725024
GCA_001018775.2	GCA_001018775.2_02665	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP026063.1	2725063	2725458
GCA_001018775.2	GCA_001018775.2_02667	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP026063.1	2725988	2726716
GCA_001018775.2	GCA_001018775.2_02668	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	93.72	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP026063.1	2726751	2727470
GCA_001018775.2	GCA_001018775.2_02669	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP026063.1	2727751	2728515
GCA_029457595.1	GCA_029457595.1_00183	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP120424.1	198353	199642
GCA_029457595.1	GCA_029457595.1_00186	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP120424.1	201820	202167
GCA_029457595.1	GCA_029457595.1_00262	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP120424.1	292871	293299
GCA_029457595.1	GCA_029457595.1_00314	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP120424.1	352498	353565
GCA_029457595.1	GCA_029457595.1_02289	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP120424.1	2333945	2334562
GCA_029457595.1	GCA_029457595.1_02302	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.59	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP120424.1	2345413	2346879
GCA_029457595.1	GCA_029457595.1_02303	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP120424.1	2346978	2347877
GCA_029457595.1	GCA_029457595.1_02305	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP120424.1	2349176	2349736
GCA_029457595.1	GCA_029457595.1_02306	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP120424.1	2349920	2351464
GCA_019733995.1	GCA_019733995.1_01187	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAASHW010000003.1	383969	384706
GCA_019929835.1	GCA_019929835.1_00506	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZQF010000002.1	119130	119558
GCA_030826425.1	GCA_030826425.1_00607	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAPJOA010000005.1	39652	40506
GCA_019375975.1	GCA_019375975.1_00503	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCX010000016.1	63328	65253
GCA_019375975.1	GCA_019375975.1_00699	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCX010000001.1	28791	29981
GCA_029691955.1	GCA_029691955.1_00083	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP121529.1	86053	86787
GCA_029691955.1	GCA_029691955.1_00087	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP121529.1	88317	88877
GCA_029691955.1	GCA_029691955.1_00091	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121529.1	92634	93014
GCA_029691955.1	GCA_029691955.1_00092	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121529.1	93004	94761
GCA_029691955.1	GCA_029691955.1_00093	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121529.1	94868	95713
GCA_029691955.1	GCA_029691955.1_00097	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP121529.1	97869	98510
GCA_029691955.1	GCA_029691955.1_00101	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP121529.1	102475	102873
GCA_029691955.1	GCA_029691955.1_00102	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP121529.1	103096	103839
GCA_029691955.1	GCA_029691955.1_00115	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP121529.1	114235	115614
GCA_029691955.1	GCA_029691955.1_00223	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP121529.1	235952	237958
GCA_029691955.1	GCA_029691955.1_00224	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP121529.1	238058	239044
GCA_029691955.1	GCA_029691955.1_00244	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121529.1	255748	257037
GCA_029691955.1	GCA_029691955.1_00247	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP121529.1	259215	259562
GCA_029691955.1	GCA_029691955.1_00323	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP121529.1	348540	348968
GCA_029691955.1	GCA_029691955.1_01022	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121529.1	1067428	1068273
GCA_029691955.1	GCA_029691955.1_01023	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121529.1	1068380	1070137
GCA_029691955.1	GCA_029691955.1_01024	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121529.1	1070127	1070507
GCA_030845055.1	GCA_030845055.1_00538	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASNMG010000002.1	33598	35379
GCA_030845055.1	GCA_030845055.1_00551	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNMG010000002.1	48241	49095
GCA_030845055.1	GCA_030845055.1_02329	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASNMG010000003.1	730323	731765
GCA_030845055.1	GCA_030845055.1_02775	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASNMG010000004.1	77375	79294
GCA_003495405.1	GCA_003495405.1_01009	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQEQ01000004.1	95597	96502
GCA_003495405.1	GCA_003495405.1_01602	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.87	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQEQ01000010.1	65493	66731
GCA_003495405.1	GCA_003495405.1_01603	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQEQ01000010.1	66748	67611
GCA_003495405.1	GCA_003495405.1_01605	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.36	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQEQ01000010.1	68403	69971
GCA_003495405.1	GCA_003495405.1_01868	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQEQ01000014.1	14715	16241
GCA_000193395.1	GCA_000193395.1_00649	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP002589.1	806825	808021
GCA_018141825.1	GCA_018141825.1_00108	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP073339.1	121528	122328
GCA_018141825.1	GCA_018141825.1_00404	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP073339.1	494558	495754
GCA_018141825.1	GCA_018141825.1_01462	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP073339.1	1725755	1726720
GCA_003942525.1	GCA_003942525.1_00313	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJNG01000001.1	321065	322282
GCA_003942525.1	GCA_003942525.1_00314	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJNG01000001.1	322402	323865
GCA_003942525.1	GCA_003942525.1_00319	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJNG01000001.1	325606	326034
GCA_003942525.1	GCA_003942525.1_01325	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	RJNG01000004.1	221332	223068
GCA_003942525.1	GCA_003942525.1_01326	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	RJNG01000004.1	223070	224794
GCA_003942525.1	GCA_003942525.1_01765	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	RJNG01000008.1	27432	29351
GCA_001697205.1	GCA_001697205.1_00763	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP012394.1	774769	776148
GCA_001697205.1	GCA_001697205.1_01536	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP012394.1	1561483	1562388
GCA_001697205.1	GCA_001697205.1_01663	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP012394.1	1696097	1697335
GCA_001697205.1	GCA_001697205.1_01664	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP012394.1	1697743	1698375
GCA_001697205.1	GCA_001697205.1_01666	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP012394.1	1699200	1700768
GCA_001697205.1	GCA_001697205.1_01875	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP012394.1	1916792	1918318
GCA_021849105.1	GCA_021849105.1_02396	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	302	98.01	72.24	299	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAJZTI010000064.1	1972	2889
GCA_021849105.1	GCA_021849105.1_02635	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	133	98.50	71.97	132	WP_063851233.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	JAJZTI010000021.1	44768	45187
GCA_018499465.1	GCA_018499465.1_00595	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.01	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAHDAA010000001.1	104809	106545
GCA_018499465.1	GCA_018499465.1_00596	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.61	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAHDAA010000001.1	106547	108271
GCA_000759315.1	GCA_000759315.1_01200	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	345	321	90.97	100.00	292	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JRNU01000022.1	37553	38590
GCA_000759315.1	GCA_000759315.1_01699	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JRNU01000050.1	923	2848
GCA_021366525.1	GCA_021366525.1_00947	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	PARTIALP	76	104	71.15	95.95	74	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAHCQD010000002.1	79806	80036
GCA_021366525.1	GCA_021366525.1_00948	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.28	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCQD010000002.1	80118	81410
GCA_021366525.1	GCA_021366525.1_00955	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCQD010000002.1	86662	87951
GCA_021366525.1	GCA_021366525.1_02257	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAHCQD010000013.1	1062	2441
GCA_021366525.1	GCA_021366525.1_02263	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645013.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAHCQD010000015.1	680	1165
GCA_003254295.1	GCA_003254295.1_02838	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	153	147	97.28	48.61	144	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	QKZO01000010.1	25438	25899
GCA_022347435.1	GCA_022347435.1_00155	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRNA010000012.1	291	1145
GCA_022347435.1	GCA_022347435.1_00157	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAKRNA010000012.1	1655	2830
GCA_022347435.1	GCA_022347435.1_00159	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAKRNA010000012.1	3034	3870
GCA_022347435.1	GCA_022347435.1_00160	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JAKRNA010000012.1	3870	4289
GCA_022347435.1	GCA_022347435.1_00163	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAKRNA010000012.1	5974	6789
GCA_022347435.1	GCA_022347435.1_00566	srtB	class B sortase SrtB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	329	329	100.00	93.62	329	CAE48738.1	class B sortase SrtB	NA	NA	JAKRNA010000019.1	9321	10310
GCA_014266065.1	GCA_014266065.1_00632	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACMVC010000002.1	574803	575876
GCA_014266065.1	GCA_014266065.1_00682	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JACMVC010000002.1	635076	635498
GCA_014266065.1	GCA_014266065.1_01126	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVC010000004.1	55423	56712
GCA_014266065.1	GCA_014266065.1_01406	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACMVC010000007.1	5609	6004
GCA_014266065.1	GCA_014266065.1_01407	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVC010000007.1	6021	7313
GCA_014266065.1	GCA_014266065.1_01411	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMVC010000007.1	10996	11343
GCA_014266065.1	GCA_014266065.1_01508	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMVC010000009.1	17353	18198
GCA_014266065.1	GCA_014266065.1_01509	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMVC010000009.1	18305	20062
GCA_014266065.1	GCA_014266065.1_01510	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMVC010000009.1	20052	20432
GCA_027686485.1	GCA_027686485.1_00765	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	297	300	95.33	49.31	288	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAQCSP010000017.1	69940	70833
GCA_027686485.1	GCA_027686485.1_01300	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAQCSP010000025.1	38819	40744
GCA_027686485.1	GCA_027686485.1_02577	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	JAQCSP010000005.1	73380	74585
GCA_027686485.1	GCA_027686485.1_02578	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	JAQCSP010000005.1	74610	75122
GCA_027686485.1	GCA_027686485.1_02852	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.55	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	JAQCSP010000059.1	229	2154
GCA_027686485.1	GCA_027686485.1_03443	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	261	266	98.12	98.47	261	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAQCSP010000094.1	173	958
GCA_022689775.1	GCA_022689775.1_00002	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCWP010000010.1	947	1507
GCA_022689775.1	GCA_022689775.1_00003	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCWP010000010.1	1691	3235
GCA_022689775.1	GCA_022689775.1_00015	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	354	350	97.71	53.64	343	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCWP010000010.1	14078	15142
GCA_022689775.1	GCA_022689775.1_00066	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JALCWP010000012.1	18630	19529
GCA_022689775.1	GCA_022689775.1_00067	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCWP010000012.1	19628	21094
GCA_022689775.1	GCA_022689775.1_00098	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JALCWP010000014.1	12715	13113
GCA_022689775.1	GCA_022689775.1_00099	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JALCWP010000014.1	13336	14079
GCA_022689775.1	GCA_022689775.1_00126	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCWP010000017.1	86	931
GCA_022689775.1	GCA_022689775.1_00127	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCWP010000017.1	1038	2795
GCA_022689775.1	GCA_022689775.1_00128	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCWP010000017.1	2785	3165
GCA_022689775.1	GCA_022689775.1_01706	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWP010000003.1	143465	144757
GCA_022689775.1	GCA_022689775.1_01710	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWP010000003.1	148440	148787
GCA_022689775.1	GCA_022689775.1_02331	fosB	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_032488468.1	fosfomycin resistance bacillithiol transferase FosB	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	JALCWP010000009.1	15961	16380
GCA_000471945.1	GCA_000471945.1_01006	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP003941.1	1118465	1120384
GCA_025150845.1	GCA_025150845.1_01094	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.85	41.31	472	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXTN010000018.1	44040	45434
GCA_013277055.1	GCA_013277055.1_00022	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMME01000010.1	55	1188
GCA_013277055.1	GCA_013277055.1_00447	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.90	639	WP_000691746.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMME01000019.1	55987	57906
GCA_013277055.1	GCA_013277055.1_00783	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	VMME01000003.1	49124	49861
GCA_024917115.1	GCA_024917115.1_00262	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	267	268	99.63	62.59	270	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP103783.1	228030	228833
GCA_024917115.1	GCA_024917115.1_00304	mphK	macrolide 2-phosphotransferase MphK	core	AMR	AMR	MACROLIDE	TELITHROMYCIN/TYLOSIN	EXACTP	306	306	100.00	100.00	306	WP_003246254.1	macrolide 2-phosphotransferase MphK	NA	NA	CP103783.1	275318	276238
GCA_024917115.1	GCA_024917115.1_00645	vmlR	ABC-F type ribosomal protection protein VmlR	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOMYCIN/TIAMULIN/VIRGINIAMYCIN M	EXACTP	547	547	100.00	100.00	547	WP_003234144.1	ABC-F type ribosomal protection protein VmlR	NA	NA	CP103783.1	604215	605858
GCA_024917115.1	GCA_024917115.1_01962	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	144	140	100.00	75.00	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP103783.1	1916121	1916555
GCA_024917115.1	GCA_024917115.1_02067	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	309	98.06	66.99	306	WP_011053164.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	CP103783.1	2047991	2048911
GCA_024917115.1	GCA_024917115.1_02807	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	139	139	100.00	100.00	139	CAB14519.1	thioredoxin-dependent arsenate reductase	NA	NA	CP103783.1	2654672	2655091
GCA_024917115.1	GCA_024917115.1_02808	acr3	arsenite efflux transporter Acr3	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	346	346	100.00	100.00	346	CAB14520.2	arsenite efflux transporter Acr3	NA	NA	CP103783.1	2655103	2656143
GCA_024917115.1	GCA_024917115.1_02909	aadK	aminoglycoside 6-adenylyltransferase AadK	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	284	284	100.00	100.00	284	WP_003229862.1	aminoglycoside 6-adenylyltransferase AadK	NF000312.1	aminoglycoside 6-adenylyltransferase AadK	CP103783.1	2735032	2735886
GCA_024917115.1	GCA_024917115.1_04402	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	173	173	100.00	100.00	173	WP_003242546.1	streptothricin N-acetyltransferase SatA	NA	NA	CP103783.1	4184312	4184833
GCA_024917115.1	GCA_024917115.1_04405	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_003242953.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP103783.1	4186833	4188209
GCA_019375795.1	GCA_019375795.1_00711	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCR010000017.1	11842	12807
GCA_019375795.1	GCA_019375795.1_00968	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCR010000001.1	154723	155523
GCA_019375795.1	GCA_019375795.1_01167	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCR010000020.1	9409	11334
GCA_027474985.1	GCA_027474985.1_01302	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	207	207	100.00	81.64	207	WP_002570989.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP101411.1	1333380	1334003
GCA_000931755.1	GCA_000931755.1_00320	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001112624.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	BBTN01000028.1	7678	8466
GCA_000931755.1	GCA_000931755.1_00522	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	91.67	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	BBTN01000024.1	21694	22128
GCA_000931755.1	GCA_000931755.1_00523	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	BBTN01000024.1	22867	23292
GCA_000931755.1	GCA_000931755.1_00524	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	96.26	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BBTN01000024.1	23331	25016
GCA_000931755.1	GCA_000931755.1_00605	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	BBTN01000023.1	45554	46369
GCA_000931755.1	GCA_000931755.1_00797	amvA	multidrug efflux MFS transporter AmvA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	492	492	100.00	98.98	492	ACQ82816.1	multidrug efflux MFS transporter AmvA	NA	NA	BBTN01000020.1	60557	62035
GCA_000931755.1	GCA_000931755.1_02404	abaF	fosfomycin efflux MFS transporter AbaF	plus	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	429	429	100.00	100.00	429	ABO11759.2	fosfomycin efflux MFS transporter AbaF	NA	NA	BBTN01000005.1	104246	105535
GCA_000931755.1	GCA_000931755.1_03022	nreB	nickel resistance MFS transporter NreB	plus	STRESS	METAL	NICKEL	NICKEL	BLASTP	416	416	100.00	98.08	416	ADY84088.1	nickel resistance MFS transporter NreB	NA	NA	BBTN01000003.1	323634	324884
GCA_000931755.1	GCA_000931755.1_03125	blaOXA-98	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	274	274	100.00	100.00	274	WP_001021777.1	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-98	NF000268.2	OXA-51 family carbapenem-hydrolyzing class D beta-lactamase	BBTN01000002.1	78344	79168
GCA_000931755.1	GCA_000931755.1_03551	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	397	397	100.00	100.00	397	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	BBTN01000001.1	82646	83839
GCA_000931755.1	GCA_000931755.1_03738	blaADC-158	extended-spectrum class C beta-lactamase ADC-158	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	383	383	100.00	100.00	383	WP_001211227.1	extended-spectrum class C beta-lactamase ADC-158	NF000425.2	ADC family extended-spectrum class C beta-lactamase	BBTN01000001.1	292300	293451
GCA_028328025.1	GCA_028328025.1_00372	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMNI010000018.1	15661	17580
GCA_028328025.1	GCA_028328025.1_01164	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.85	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAQMNI010000038.1	17022	18500
GCA_028328025.1	GCA_028328025.1_01625	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	152	243	56.38	98.54	137	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	NA	JAQMNI010000005.1	70771	71229
GCA_000010445.1	GCA_000010445.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	AP009324.1	40198	40602
GCA_000010445.1	GCA_000010445.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	AP009324.1	40819	41562
GCA_000010445.1	GCA_000010445.1_00041	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	AP009324.1	44992	46998
GCA_000010445.1	GCA_000010445.1_00042	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	AP009324.1	47098	48855
GCA_000010445.1	GCA_000010445.1_00043	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	123	123	100.00	99.19	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	AP009324.1	48855	49226
GCA_000010445.1	GCA_000010445.1_00052	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	AP009324.1	55963	56694
GCA_000010445.1	GCA_000010445.1_00053	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	AP009324.1	56820	57602
GCA_000010445.1	GCA_000010445.1_00134	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	AP009324.1	151594	152952
GCA_000010445.1	GCA_000010445.1_00332	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	AP009324.1	380461	381816
GCA_000010445.1	GCA_000010445.1_00370	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	AP009324.1	415122	415733
GCA_000010445.1	GCA_000010445.1_00400	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AP009324.1	439868	441787
GCA_000010445.1	GCA_000010445.1_01718	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	AP009324.1	1763657	1764388
GCA_000010445.1	GCA_000010445.1_01719	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	AP009324.1	1764514	1765296
GCA_000010445.1	GCA_000010445.1_01843	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP009324.1	1910330	1911622
GCA_000010445.1	GCA_000010445.1_01882	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	AP009324.1	1942755	1943477
GCA_000010445.1	GCA_000010445.1_01883	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	AP009324.1	1943602	1944309
GCA_000010445.1	GCA_000010445.1_01888	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	AP009324.1	1948439	1949422
GCA_000010445.1	GCA_000010445.1_01889	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	AP009324.1	1949424	1950359
GCA_000010445.1	GCA_000010445.1_01897	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	AP009324.1	1956561	1957316
GCA_000010445.1	GCA_000010445.1_01898	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	AP009324.1	1957355	1957750
GCA_000010445.1	GCA_000010445.1_01900	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	AP009324.1	1958280	1959008
GCA_000010445.1	GCA_000010445.1_01901	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	AP009324.1	1959043	1959762
GCA_000010445.1	GCA_000010445.1_01902	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	AP009324.1	1960043	1960807
GCA_000010445.1	GCA_000010445.1_02057	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	AP009324.1	2085714	2086064
GCA_000010445.1	GCA_000010445.1_02061	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	AP009324.1	2087561	2088052
GCA_000010445.1	GCA_000010445.1_02065	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	AP009324.1	2089761	2090534
GCA_000010445.1	GCA_000010445.1_02127	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	AP009324.1	2135216	2135938
GCA_000010445.1	GCA_000010445.1_02128	sec3	staphylococcal enterotoxin type C3	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	BAB43097.1	staphylococcal enterotoxin type C3	NA	NA	AP009324.1	2136107	2136907
GCA_000010445.1	GCA_000010445.1_02130	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	99.15	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	AP009324.1	2139133	2139837
GCA_000010445.1	GCA_000010445.1_02155	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	AP009324.1	2157144	2157278
GCA_000010445.1	GCA_000010445.1_02300	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	AP009324.1	2308901	2310343
GCA_000010445.1	GCA_000010445.1_02473	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AP009324.1	2460466	2460885
GCA_000010445.1	GCA_000010445.1_02559	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	AP009324.1	2550708	2551673
GCA_000010445.1	GCA_000010445.1_02560	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	AP009324.1	2552240	2553187
GCA_000010445.1	GCA_000010445.1_02561	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	AP009324.1	2553189	2554166
GCA_000010445.1	GCA_000010445.1_02639	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1115	1115	100.00	100.00	1115	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	AP009324.1	2632535	2635882
GCA_000010445.1	GCA_000010445.1_02787	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	AP009324.1	2793354	2794883
GCA_000010445.1	GCA_000010445.1_02821	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AP009324.1	2838213	2839265
GCA_008831325.1	GCA_008831325.1_02020	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	221	245	90.20	99.55	221	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP044494.1	671	1336
GCA_008831325.1	GCA_008831325.1_02023	tet(C)	tetracycline efflux MFS transporter Tet(C)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	396	396	100.00	100.00	396	WP_001297013.1	tetracycline efflux MFS transporter Tet(C)	NF012191.0	tetracycline efflux MFS transporter Tet(C)	CP044494.1	2380	3570
GCA_008831325.1	GCA_008831325.1_02024	catA1	type A-1 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	219	219	100.00	100.00	219	WP_000412211.1	type A-1 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP044494.1	4604	5263
GCA_008831325.1	GCA_008831325.1_02031	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP044494.1	9740	10477
GCA_008831325.1	GCA_008831325.1_02034	tet(C)	tetracycline efflux MFS transporter Tet(C)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	396	396	100.00	100.00	396	WP_001297013.1	tetracycline efflux MFS transporter Tet(C)	NF012191.0	tetracycline efflux MFS transporter Tet(C)	CP044494.1	11450	12640
GCA_029691775.1	GCA_029691775.1_00069	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121483.1	69911	70756
GCA_029691775.1	GCA_029691775.1_00072	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121483.1	72609	72989
GCA_029691775.1	GCA_029691775.1_01696	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121483.1	1729304	1730596
GCA_029691775.1	GCA_029691775.1_01700	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP121483.1	1734279	1734626
GCA_029691775.1	GCA_029691775.1_01765	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	95.77	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP121483.1	1809249	1809677
GCA_030516195.1	GCA_030516195.1_01663	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.42	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100381.1	1732644	1733498
GCA_003355275.1	GCA_003355275.1_00333	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP031331.1	325610	326989
GCA_003355275.1	GCA_003355275.1_01070	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP031331.1	1086644	1087549
GCA_003355275.1	GCA_003355275.1_01196	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP031331.1	1223527	1224765
GCA_003355275.1	GCA_003355275.1_01197	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP031331.1	1225169	1225801
GCA_003355275.1	GCA_003355275.1_01199	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP031331.1	1226626	1228194
GCA_003355275.1	GCA_003355275.1_01460	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	508	99.61	97.83	506	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP031331.1	1484788	1486311
GCA_016406625.1	GCA_016406625.1_00076	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP066376.1	76330	77619
GCA_016406625.1	GCA_016406625.1_00079	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP066376.1	79797	80144
GCA_016406625.1	GCA_016406625.1_00153	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP066376.1	159919	160347
GCA_015255615.1	GCA_015255615.1_00856	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JABZNQ010000062.1	1996	3213
GCA_015255615.1	GCA_015255615.1_00857	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JABZNQ010000062.1	3333	4796
GCA_028326405.1	GCA_028326405.1_00049	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMMT010000010.1	49640	51559
GCA_028326405.1	GCA_028326405.1_01848	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMMT010000008.1	70517	71248
GCA_000155955.1	GCA_000155955.1_00003	tet(C)	tetracycline efflux MFS transporter Tet(C)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	372	396	93.94	99.73	372	WP_001297013.1	tetracycline efflux MFS transporter Tet(C)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	GG697145.2	40	1158
GCA_000155955.1	GCA_000155955.1_02138	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	100.00	43.09	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	GG697141.2	1105901	1106254
GCA_001814655.1	GCA_001814655.1_01072	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV817391.1	148784	150424
GCA_001807365.1	GCA_001807365.1_00333	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV788595.1	4800	5654
GCA_001570845.1	GCA_001570845.1_02796	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BCSL01000044.1	20243	21643
GCA_009379585.1	GCA_009379585.1_00286	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXDI01000012.1	112366	113307
GCA_000478155.1	GCA_000478155.1_02384	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515772.1	252	1106
GCA_003493605.1	GCA_003493605.1_00239	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQKA01000001.1	244487	245881
GCA_002096535.1	GCA_002096535.1_01298	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NCUN01000006.1	49666	50403
GCA_002096535.1	GCA_002096535.1_01299	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	NCUN01000006.1	51510	53429
GCA_000738165.1	GCA_000738165.1_01873	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JFCI01000035.1	138742	140163
GCA_000738165.1	GCA_000738165.1_01883	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.18	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCI01000035.1	146746	147600
GCA_951230325.1	GCA_951230325.1_00762	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CATNVF010000032.1	2350	3540
GCA_022815345.1	GCA_022815345.1_01313	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JALGYM010000012.1	2560	4566
GCA_022815345.1	GCA_022815345.1_01314	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JALGYM010000012.1	4666	5652
GCA_022815345.1	GCA_022815345.1_01371	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALGYM010000016.1	11	856
GCA_022815345.1	GCA_022815345.1_01372	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALGYM010000016.1	963	2720
GCA_022815345.1	GCA_022815345.1_01373	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALGYM010000016.1	2710	3090
GCA_022815345.1	GCA_022815345.1_01376	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALGYM010000016.1	4876	5436
GCA_022815345.1	GCA_022815345.1_01377	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALGYM010000016.1	5620	7164
GCA_022815345.1	GCA_022815345.1_01700	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALGYM010000002.1	287529	288821
GCA_022815345.1	GCA_022815345.1_01734	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JALGYM010000021.1	1106	4180
GCA_022815345.1	GCA_022815345.1_01737	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	PARTIALP	105	134	78.36	99.05	105	WP_001242578.1	bleomycin binding protein	NA	NA	JALGYM010000023.1	35	352
GCA_022815345.1	GCA_022815345.1_01739	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	159	244	65.16	99.37	159	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NA	NA	JALGYM010000024.1	23	502
GCA_022815345.1	GCA_022815345.1_02017	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JALGYM010000030.1	270	1013
GCA_022815345.1	GCA_022815345.1_02500	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JALGYM010000008.1	49587	50084
GCA_029959705.1	GCA_029959705.1_00247	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	392	393	100.00	88.80	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	JASCOS010000117.1	6766	7944
GCA_029959705.1	GCA_029959705.1_00757	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	263	303	88.45	58.30	271	WP_063857820.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	JASCOS010000154.1	5267	6058
GCA_029959705.1	GCA_029959705.1_00766	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	348	345	93.91	36.25	331	WP_063842277.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JASCOS010000156.1	2596	3642
GCA_029959705.1	GCA_029959705.1_00796	aadA13	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA13	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	265	265	100.00	100.00	265	WP_001424636.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA13	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	JASCOS010000015.1	7806	8603
GCA_029959705.1	GCA_029959705.1_01005	aph(6)-I	APH(6)-I family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	269	270	99.63	74.35	269	WP_063841666.1	APH(6)-I family aminoglycoside O-phosphotransferase	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JASCOS010000170.1	2170	2979
GCA_029959705.1	GCA_029959705.1_02080	blaCESS	CESS family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	HMM	296	297	99.66	72.97	296	WP_062166693.1	CESS family extended-spectrum class A beta-lactamase	NF050797.1	CESS family extended-spectrum class A beta-lactamase	JASCOS010000035.1	16216	17106
GCA_029959705.1	GCA_029959705.1_02412	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	414	396	99.24	66.75	394	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	JASCOS010000044.1	3007	4251
GCA_029959705.1	GCA_029959705.1_02439	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	346	345	95.94	36.09	338	WP_063842277.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JASCOS010000045.1	10459	11499
GCA_029959705.1	GCA_029959705.1_03077	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	93.94	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	JASCOS010000006.1	7396	7893
GCA_029959705.1	GCA_029959705.1_03078	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	571	571	100.00	91.24	571	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	JASCOS010000006.1	7890	9605
GCA_029959705.1	GCA_029959705.1_03079	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	95.89	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	JASCOS010000006.1	9609	10049
GCA_029959705.1	GCA_029959705.1_03081	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	99.01	95.02	201	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	JASCOS010000006.1	11264	11875
GCA_029959705.1	GCA_029959705.1_03082	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	94.24	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	JASCOS010000006.1	11973	12860
GCA_029959705.1	GCA_029959705.1_03083	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	96.71	304	APX31172.1	heat resistance protein YfdX1	NA	NA	JASCOS010000006.1	12963	13877
GCA_029959705.1	GCA_029959705.1_03084	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	99.34	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	JASCOS010000006.1	13900	14358
GCA_029959705.1	GCA_029959705.1_03087	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.47	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	JASCOS010000006.1	17738	20587
GCA_916050405.1	GCA_916050405.1_01412	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAJZKV010000052.1	16674	17864
GCA_916050405.1	GCA_916050405.1_02222	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAJZKV010000136.1	862	1827
GCA_024759865.1	GCA_024759865.1_00236	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103206.1	206588	208513
GCA_024759865.1	GCA_024759865.1_01207	blaMUN	MUN family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	291	302	96.36	100.00	291	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	CP103206.1	1236283	1237158
GCA_024759865.1	GCA_024759865.1_01639	blaMUN	MUN family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	207	302	68.54	100.00	207	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF033103.1	class A beta-lactamase	CP103206.1	1697659	1698282
GCA_024759865.1	GCA_024759865.1_01843	blaMUN	MUN family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	291	302	96.36	100.00	291	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	CP103206.1	1885135	1886010
GCA_024759865.1	GCA_024759865.1_03505	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	408	408	100.00	98.28	408	WP_012102963.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP103206.1	3520455	3521681
GCA_024759865.1	GCA_024759865.1_03507	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	PARTIALP	413	487	80.49	96.94	392	WP_000420317.1	ABC-F type ribosomal protection protein Msr(D)	NA	NA	CP103206.1	3521976	3523217
GCA_024759865.1	GCA_024759865.1_03513	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	PARTIALP	194	244	77.46	99.47	189	WP_014387027.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP103206.1	3527069	3527653
GCA_024759865.1	GCA_024759865.1_03940	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	97.50	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103206.1	3952134	3954059
GCA_024759865.1	GCA_024759865.1_04113	blaMUN	MUN family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	291	302	96.36	100.00	291	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	CP103206.1	4109906	4110781
GCA_024759865.1	GCA_024759865.1_04552	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.10	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103206.1	4500932	4502263
GCA_024759865.1	GCA_024759865.1_05942	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	CP103206.1	5725730	5726593
GCA_024759865.1	GCA_024759865.1_05943	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	378	388	97.42	100.00	378	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	CP103206.1	5726769	5727905
GCA_024759865.1	GCA_024759865.1_05944	tet(X1)	tetracycline-inactivating monooxygenase Tet(X1)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	379	379	100.00	99.74	379	WP_204376222.1	tetracycline-inactivating monooxygenase Tet(X1)	NA	NA	CP103206.1	5728104	5729243
GCA_024759865.1	GCA_024759865.1_06734	blaMUN	MUN family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	291	302	96.36	100.00	291	WP_206340447.1	MUN family extended-spectrum class A beta-lactamase MUN-1	NF045651.1	MUN family extended-spectrum class A beta-lactamase	CP103206.1	6440581	6441456
GCA_000506685.1	GCA_000506685.1_01198	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	98.48	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AYRO01000013.1	16112	17533
GCA_003495225.1	GCA_003495225.1_00256	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	QQEZ01000005.1	23492	24871
GCA_003495225.1	GCA_003495225.1_00516	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQEZ01000006.1	79784	81022
GCA_003495225.1	GCA_003495225.1_00517	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQEZ01000006.1	81272	81904
GCA_003495225.1	GCA_003495225.1_01612	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.24	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQEZ01000002.1	132040	133566
GCA_003495225.1	GCA_003495225.1_02009	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQEZ01000003.1	280011	280916
GCA_012396315.1	GCA_012396315.1_00191	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAAXPF010000001.1	183559	184413
GCA_012396315.1	GCA_012396315.1_00961	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	95.13	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JAAXPF010000002.1	185268	186809
GCA_012396315.1	GCA_012396315.1_00962	tetB	tetracycline efflux ABC transporter TetAB subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	601	528	55.68	97.28	294	WP_011116970.1	tetracycline efflux ABC transporter TetAB subunit B	NA	NA	JAAXPF010000002.1	186810	188615
GCA_016804245.1	GCA_016804245.1_00024	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP060160.1	26866	27939
GCA_016804245.1	GCA_016804245.1_00158	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP060160.1	170582	171874
GCA_016804245.1	GCA_016804245.1_01288	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP060160.1	1287897	1288679
GCA_016804245.1	GCA_016804245.1_01289	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP060160.1	1288805	1289536
GCA_016804245.1	GCA_016804245.1_02119	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP060160.1	2110122	2110541
GCA_027475005.1	GCA_027475005.1_00494	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP101412.1	494904	496823
GCA_022569015.1	GCA_022569015.1_00158	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKI010000001.1	158097	159170
GCA_022569015.1	GCA_022569015.1_00291	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKI010000001.1	301756	303048
GCA_022569015.1	GCA_022569015.1_00438	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKRKI010000001.1	449772	450617
GCA_022569015.1	GCA_022569015.1_00439	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKRKI010000001.1	450724	452481
GCA_022569015.1	GCA_022569015.1_00440	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKRKI010000001.1	452471	452851
GCA_022569015.1	GCA_022569015.1_01937	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKI010000006.1	47524	47943
GCA_017355045.1	GCA_017355045.1_00045	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP071505.1	50251	50643
GCA_017355045.1	GCA_017355045.1_00046	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	88.58	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP071505.1	50661	51950
GCA_017355045.1	GCA_017355045.1_00129	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP071505.1	122940	124232
GCA_017355045.1	GCA_017355045.1_00925	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP071505.1	867730	868371
GCA_017355045.1	GCA_017355045.1_02143	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP071505.1	2059300	2060940
GCA_017355045.1	GCA_017355045.1_02161	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP071505.1	2078475	2079035
GCA_017355045.1	GCA_017355045.1_02162	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP071505.1	2079219	2080763
GCA_017355045.1	GCA_017355045.1_02473	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP071506.1	33672	34232
GCA_017355045.1	GCA_017355045.1_02474	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP071506.1	34416	35960
GCA_001810695.1	GCA_001810695.1_00321	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV802424.1	102114	102968
GCA_001837245.1	GCA_001837245.1_01057	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV831899.1	7329	8969
GCA_003956025.1	GCA_003956025.1_00288	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	233	281	81.49	56.77	229	WP_000733274.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP033735.1	274190	274891
GCA_003956025.1	GCA_003956025.1_00297	fusF	fusidic acid resistance EF-G-binding protein FusF	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	PARTIALP	131	214	60.28	98.45	129	WP_063851267.1	fusidic acid resistance EF-G-binding protein FusF	NA	NA	CP033735.1	281356	281751
GCA_003956025.1	GCA_003956025.1_00594	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	100.00	76.26	139	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP033735.1	559611	560030
GCA_003956025.1	GCA_003956025.1_00606	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	85.05	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	CP033735.1	567415	567738
GCA_003956025.1	GCA_003956025.1_00754	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.54	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP033735.1	682482	683771
GCA_003956025.1	GCA_003956025.1_01408	sal	Sal family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	HMM	543	543	100.00	69.43	543	WP_096809342.1	Sal family ABC-F type ribosomal protection protein	NF000169.2	Sal family ABC-F type ribosomal protection protein	CP033735.1	1360474	1362105
GCA_003956025.1	GCA_003956025.1_02441	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	142	150	89.33	55.22	134	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP033735.1	2362408	2362836
GCA_003956025.1	GCA_003956025.1_02483	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	98.27	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	CP033735.1	2401241	2402674
GCA_003956025.1	GCA_003956025.1_02505	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP033735.1	2421465	2421812
GCA_003956025.1	GCA_003956025.1_02509	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	91.84	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP033735.1	2425495	2426787
GCA_003956025.1	GCA_003956025.1_02737	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	PARTIALP	356	488	72.95	99.72	356	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NA	NA	CP033734.1	5763	6833
GCA_030176715.1	GCA_030176715.1_00999	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVN010000022.1	27001	27855
GCA_000257925.1	GCA_000257925.1_01865	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	AJIN01000058.1	147731	148921
GCA_028322445.1	GCA_028322445.1_00794	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	598	593	98.99	33.50	603	WP_012705551.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	JAQLYB010000001.1	341219	343015
GCA_003367335.1	GCA_003367335.1_00839	tet(V)	tetracycline efflux MFS transporter Tet(V)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	416	419	97.85	68.29	410	WP_003896589.1	tetracycline efflux MFS transporter Tet(V)	NF012178.0	tetracycline efflux MFS transporter Tet(V)	CP031414.1	863117	864367
GCA_003367335.1	GCA_003367335.1_01175	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	391	96.68	61.64	378	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	CP031414.1	1226943	1228118
GCA_003367335.1	GCA_003367335.1_02747	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	294	98.98	64.98	297	WP_063842628.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP031414.1	2877871	2878782
GCA_016808995.1	GCA_016808995.1_00453	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	QVUS01000006.1	98999	99418
GCA_016808995.1	GCA_016808995.1_01043	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	QVUS01000008.1	263269	263649
GCA_016808995.1	GCA_016808995.1_01044	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	QVUS01000008.1	263639	265396
GCA_016808995.1	GCA_016808995.1_01045	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	QVUS01000008.1	265503	266348
GCA_016808995.1	GCA_016808995.1_01541	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	QVUS01000003.1	90304	91377
GCA_016808995.1	GCA_016808995.1_01676	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	QVUS01000003.1	234016	235308
GCA_025150665.1	GCA_025150665.1_01826	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.85	41.31	472	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXTC010000037.1	2116	3510
GCA_030435915.1	GCA_030435915.1_00097	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP129365.1	111749	112177
GCA_030435915.1	GCA_030435915.1_00159	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP129365.1	181145	181492
GCA_030435915.1	GCA_030435915.1_00162	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP129365.1	183670	184959
GCA_030435915.1	GCA_030435915.1_00200	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP129365.1	228413	230419
GCA_030435915.1	GCA_030435915.1_00852	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP129365.1	887767	888612
GCA_030435915.1	GCA_030435915.1_00853	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP129365.1	888719	890476
GCA_030435915.1	GCA_030435915.1_00854	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP129365.1	890466	890846
GCA_030435915.1	GCA_030435915.1_01883	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP129365.1	1946656	1947153
GCA_030435915.1	GCA_030435915.1_02346	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_001829870.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CP129366.1	6098	6583
GCA_030435915.1	GCA_030435915.1_02348	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP129366.1	7718	8461
GCA_030435915.1	GCA_030435915.1_02351	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP129366.1	10537	11916
GCA_030435915.1	GCA_030435915.1_02365	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP129366.1	23308	24747
GCA_030435915.1	GCA_030435915.1_02367	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP129366.1	25664	26224
GCA_030435915.1	GCA_030435915.1_02368	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP129366.1	26408	27952
GCA_030435915.1	GCA_030435915.1_02384	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP129368.1	1289	2023
GCA_021367155.1	GCA_021367155.1_01596	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCPB010000006.1	62946	64238
GCA_021367155.1	GCA_021367155.1_02568	spd	ANT(9) family aminoglycoside nucleotidyltransferase Spd	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	257	257	100.00	100.00	257	WP_021285909.1	ANT(9) family aminoglycoside nucleotidyltransferase Spd	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JAHCPB010000022.1	2611	3384
GCA_021367155.1	GCA_021367155.1_02571	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_000700648.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAHCPB010000023.1	2099	2584
GCA_021367155.1	GCA_021367155.1_02575	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JAHCPB010000025.1	1544	2278
GCA_030232785.1	GCA_030232785.1_01848	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPHX010000007.1	821	1675
GCA_000963255.1	GCA_000963255.1_00472	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JYOV01000005.1	134722	136641
GCA_000963255.1	GCA_000963255.1_00834	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JYOV01000010.1	70386	70814
GCA_022075545.1	GCA_022075545.1_01381	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP038252.1	1291199	1292398
GCA_001806915.1	GCA_001806915.1_00674	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV786418.1	25721	27640
GCA_001806915.1	GCA_001806915.1_00915	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV786423.1	42764	44404
GCA_001806915.1	GCA_001806915.1_01406	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	97.24	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	KV786430.1	8856	10595
GCA_001806915.1	GCA_001806915.1_01407	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	93.26	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	KV786430.1	10592	12331
GCA_001806915.1	GCA_001806915.1_01800	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	61.36	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KV786436.1	105160	105588
GCA_022346085.1	GCA_022346085.1_02309	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.59	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDI010000009.1	935	1789
GCA_018456105.1	GCA_018456105.1_00217	fusC	FusC family fusidic acid resistance EF-G-binding protein	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	BLASTP	212	212	100.00	99.53	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	JAGMUC010000001.1	210712	211350
GCA_018456105.1	GCA_018456105.1_00234	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGMUC010000001.1	235736	237028
GCA_018456105.1	GCA_018456105.1_00238	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAGMUC010000001.1	240711	241058
GCA_018456105.1	GCA_018456105.1_00284	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	99.30	78.64	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGMUC010000001.1	290023	291312
GCA_018456105.1	GCA_018456105.1_00327	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.96	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAGMUC010000001.1	330634	332277
GCA_018456105.1	GCA_018456105.1_02310	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAGMUC010000002.1	16507	16887
GCA_018456105.1	GCA_018456105.1_02311	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAGMUC010000002.1	16877	18634
GCA_018456105.1	GCA_018456105.1_02312	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	209	281	74.38	99.52	209	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033103.1	class A beta-lactamase	JAGMUC010000002.1	18956	19585
GCA_030176355.1	GCA_030176355.1_00540	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUL010000019.1	807	1661
GCA_011714835.1	GCA_011714835.1_01398	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXS01000039.1	2299	3432
GCA_011714835.1	GCA_011714835.1_02227	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RXXS01000008.1	30340	31077
GCA_011714835.1	GCA_011714835.1_02228	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RXXS01000008.1	32184	34103
GCA_001807725.1	GCA_001807725.1_00561	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV790849.1	26323	27963
GCA_001807725.1	GCA_001807725.1_01510	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	KV790870.1	5156	5893
GCA_001807725.1	GCA_001807725.1_01511	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV790870.1	7000	8919
GCA_000722765.2	GCA_000722765.2_00850	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	98.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP028415.1	799874	801664
GCA_000722765.2	GCA_000722765.2_00997	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP028415.1	972009	973472
GCA_000722765.2	GCA_000722765.2_00998	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP028415.1	973592	974809
GCA_006439125.1	GCA_006439125.1_01336	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	SDPJ01000037.1	14016	15410
GCA_014335185.1	GCA_014335185.1_00177	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PDHD01000002.1	185371	186795
GCA_020554365.1	GCA_020554365.1_00128	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.15	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAJCHF010000001.1	138785	140521
GCA_020554365.1	GCA_020554365.1_00129	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.91	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAJCHF010000001.1	140523	142247
GCA_020554365.1	GCA_020554365.1_00518	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAJCHF010000015.1	28399	29862
GCA_020554365.1	GCA_020554365.1_00519	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAJCHF010000015.1	29982	31199
GCA_959021785.1	GCA_959021785.1_00631	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.28	639	WP_011860841.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAUEWK010000001.1	638376	640295
GCA_029851005.1	GCA_029851005.1_00486	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAOVAU010000001.1	304150	305790
GCA_023109915.1	GCA_023109915.1_00657	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALGPU010000001.1	633392	635311
GCA_023109915.1	GCA_023109915.1_00668	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JALGPU010000001.1	645229	645966
GCA_001809345.1	GCA_001809345.1_01020	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV797456.1	303126	304766
GCA_024462435.1	GCA_024462435.1_00010	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANGBM010000001.1	12814	14739
GCA_024462435.1	GCA_024462435.1_01734	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	331	300	97.00	50.17	291	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JANGBM010000004.1	74337	75332
GCA_003354825.1	GCA_003354825.1_00748	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP025838.1	691968	693407
GCA_003354825.1	GCA_003354825.1_00946	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP025838.1	877950	879149
GCA_003354825.1	GCA_003354825.1_01237	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP025838.1	1163641	1164378
GCA_003354825.1	GCA_003354825.1_01248	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP025838.1	1174248	1176167
GCA_003354825.1	GCA_003354825.1_01249	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP025838.1	1177274	1178011
GCA_003493245.1	GCA_003493245.1_01679	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQKS01000005.1	135435	136829
GCA_002096175.1	GCA_002096175.1_00326	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	NCUV01000024.1	309668	310096
GCA_002096175.1	GCA_002096175.1_00726	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NCUV01000018.1	94429	96324
GCA_013276425.1	GCA_013276425.1_01834	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	99.73	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMLA01000007.1	242	1375
GCA_019048305.1	GCA_019048305.1_01404	blaOXA-283	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	276	276	100.00	100.00	276	WP_004647119.1	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	NF000436.2	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	CP077336.1	1459080	1459910
GCA_019048305.1	GCA_019048305.1_02306	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	97.23	76.68	386	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP077336.1	2394954	2396174
GCA_019048305.1	GCA_019048305.1_03324	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	95.07	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CP077338.1	158360	158971
GCA_019048305.1	GCA_019048305.1_03325	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	94.92	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP077338.1	159068	159955
GCA_019048305.1	GCA_019048305.1_03326	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.57	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP077338.1	160165	163014
GCA_019048305.1	GCA_019048305.1_03417	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP077339.1	14232	14468
GCA_019048305.1	GCA_019048305.1_03418	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP077339.1	14465	14830
GCA_019048305.1	GCA_019048305.1_03419	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	97.50	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP077339.1	14848	16533
GCA_019048305.1	GCA_019048305.1_03420	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP077339.1	16572	16997
GCA_019048305.1	GCA_019048305.1_03421	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	84.62	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP077339.1	17025	17300
GCA_019048305.1	GCA_019048305.1_03422	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	94.83	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP077339.1	17314	17664
GCA_019048305.1	GCA_019048305.1_03423	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.25	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP077339.1	17736	18191
GCA_022346805.1	GCA_022346805.1_01682	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	410	414	95.89	71.36	398	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	JAKREJ010000001.1	750912	752144
GCA_022346805.1	GCA_022346805.1_01906	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	57.47	261	WP_003161096.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	JAKREJ010000002.1	95016	95798
GCA_022346805.1	GCA_022346805.1_04046	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family B	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	183	186	91.94	64.33	171	AAN67541.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	NF040504.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	JAKREJ010000008.1	14723	15274
GCA_022346805.1	GCA_022346805.1_04381	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	98.72	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	JAKREJ010000009.1	78843	79079
GCA_022346805.1	GCA_022346805.1_04382	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	JAKREJ010000009.1	79076	79441
GCA_022346805.1	GCA_022346805.1_04383	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.57	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKREJ010000009.1	79459	81144
GCA_022346805.1	GCA_022346805.1_04384	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JAKREJ010000009.1	81216	81491
GCA_022346805.1	GCA_022346805.1_04385	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	JAKREJ010000009.1	81504	81854
GCA_022346805.1	GCA_022346805.1_04386	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	JAKREJ010000009.1	81926	82360
GCA_008728795.1	GCA_008728795.1_01305	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP041727.1	1256487	1256906
GCA_008728795.1	GCA_008728795.1_01794	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP041727.1	1768634	1769707
GCA_008728795.1	GCA_008728795.1_01942	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP041727.1	1929358	1930650
GCA_023109195.1	GCA_023109195.1_00601	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDUB010000001.1	591011	592474
GCA_023109195.1	GCA_023109195.1_00602	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDUB010000001.1	592594	593811
GCA_962729065.1	GCA_962729065.1_00427	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.73	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIZE010000002.1	134276	135655
GCA_962729065.1	GCA_962729065.1_00592	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.36	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIZE010000003.1	79892	81130
GCA_962729065.1	GCA_962729065.1_00593	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIZE010000003.1	81380	82012
GCA_962729065.1	GCA_962729065.1_00728	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIZE010000004.1	56053	57579
GCA_962729065.1	GCA_962729065.1_02021	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CAUIZE010000026.1	10497	11333
GCA_962729065.1	GCA_962729065.1_02022	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CAUIZE010000026.1	11333	11752
GCA_962729065.1	GCA_962729065.1_02026	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089072.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CAUIZE010000027.1	1304	2509
GCA_001223985.1	GCA_001223985.1_00105	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	427	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUES01000001.1	98470	99753
GCA_001223985.1	GCA_001223985.1_01720	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CUES01000007.1	78291	78605
GCA_001223985.1	GCA_001223985.1_01721	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.90	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUES01000007.1	78605	79894
GCA_001223985.1	GCA_001223985.1_01722	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CUES01000007.1	79912	80307
GCA_027497935.1	GCA_027497935.1_00265	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAJNSB010000013.1	48353	49816
GCA_027497935.1	GCA_027497935.1_00266	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAJNSB010000013.1	49837	51054
GCA_027497935.1	GCA_027497935.1_00633	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JAJNSB010000001.1	105350	106549
GCA_027497935.1	GCA_027497935.1_01736	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.25	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAJNSB010000007.1	53902	55797
GCA_015262545.1	GCA_015262545.1_00120	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JABZSO010000003.1	121948	122913
GCA_015262545.1	GCA_015262545.1_00419	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZSO010000004.1	162095	163285
GCA_021189315.1	GCA_021189315.1_01567	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JAIBNO010000002.1	260493	260990
GCA_021189315.1	GCA_021189315.1_01598	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAIBNO010000002.1	291416	292708
GCA_021189315.1	GCA_021189315.1_02126	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAIBNO010000004.1	182681	184687
GCA_021189315.1	GCA_021189315.1_02127	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JAIBNO010000004.1	184787	185773
GCA_021189315.1	GCA_021189315.1_02195	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JAIBNO010000005.1	47933	48574
GCA_021189315.1	GCA_021189315.1_02457	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAIBNO010000008.1	19371	20216
GCA_021189315.1	GCA_021189315.1_02458	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.63	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAIBNO010000008.1	20323	22080
GCA_021189315.1	GCA_021189315.1_02459	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAIBNO010000008.1	22070	22450
GCA_021189315.1	GCA_021189315.1_02461	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAIBNO010000008.1	23538	25004
GCA_021189315.1	GCA_021189315.1_02475	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAIBNO010000010.1	1159	1482
GCA_021189315.1	GCA_021189315.1_02476	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645013.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAIBNO010000011.1	1221	1706
GCA_015711285.1	GCA_015711285.1_00325	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.66	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	JACBLI010000015.1	34763	36001
GCA_015711285.1	GCA_015711285.1_00348	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	JACBLI010000016.1	19383	20288
GCA_015711285.1	GCA_015711285.1_00531	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	JACBLI010000001.1	33851	35230
GCA_015711285.1	GCA_015711285.1_01565	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	JACBLI010000004.1	122492	124018
GCA_003474615.1	GCA_003474615.1_02363	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	598	593	98.99	34.33	603	WP_012705551.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	QRON01000005.1	58531	60327
GCA_003474615.1	GCA_003474615.1_02719	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	HMM	164	164	100.00	89.02	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	QRON01000007.1	59448	59942
GCA_003474615.1	GCA_003474615.1_02738	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	QRON01000007.1	77923	79842
GCA_003474615.1	GCA_003474615.1_02739	tet(40)	tetracycline efflux MFS transporter Tet(40)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	406	406	100.00	100.00	406	WP_024407615.1	tetracycline efflux MFS transporter Tet(40)	NF000049.1	tetracycline efflux MFS transporter Tet(40)	QRON01000007.1	79893	81113
GCA_016889365.1	GCA_016889365.1_01864	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	43.09	123	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP069509.1	2087162	2087530
GCA_009716995.1	GCA_009716995.1_00384	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMXQ01000001.1	303123	304340
GCA_009716995.1	GCA_009716995.1_00385	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMXQ01000001.1	304460	305923
GCA_009716995.1	GCA_009716995.1_00390	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMXQ01000001.1	307790	308218
GCA_003263915.2	GCA_003263915.2_01680	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	123	100.00	45.60	125	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040938.1	1675435	1675809
GCA_002285175.1	GCA_002285175.1_02076	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	NSGM01000007.1	3431	4285
GCA_028325505.1	GCA_028325505.1_01192	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQMJJ010000002.1	335116	336333
GCA_028325505.1	GCA_028325505.1_01193	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQMJJ010000002.1	336453	337916
GCA_028325505.1	GCA_028325505.1_01605	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAQMJJ010000003.1	138537	140015
GCA_002073395.2	GCA_002073395.2_01734	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP020406.2	1744028	1744447
GCA_002073395.2	GCA_002073395.2_02226	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP020406.2	2251165	2252238
GCA_002073395.2	GCA_002073395.2_02367	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP020406.2	2403305	2404597
GCA_018378595.1	GCA_018378595.1_01518	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAGZXD010000004.1	139357	140547
GCA_000191765.2	GCA_000191765.2_00818	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	AEXO01000095.1	266381	267577
GCA_000191765.2	GCA_000191765.2_01096	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	AEXO01000076.1	3785	5710
GCA_000191765.2	GCA_000191765.2_02251	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	AEXO01000021.1	82	1047
GCA_022815255.1	GCA_022815255.1_00737	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALGYR010000014.1	11	856
GCA_022815255.1	GCA_022815255.1_00738	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALGYR010000014.1	963	2720
GCA_022815255.1	GCA_022815255.1_00739	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALGYR010000014.1	2710	3090
GCA_022815255.1	GCA_022815255.1_00742	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALGYR010000014.1	4876	5436
GCA_022815255.1	GCA_022815255.1_00743	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALGYR010000014.1	5620	7164
GCA_022815255.1	GCA_022815255.1_00767	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JALGYR010000015.1	2557	4563
GCA_022815255.1	GCA_022815255.1_00768	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JALGYR010000015.1	4663	5649
GCA_022815255.1	GCA_022815255.1_01431	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JALGYR010000021.1	982	1725
GCA_022815255.1	GCA_022815255.1_01432	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JALGYR010000021.1	1948	2346
GCA_022815255.1	GCA_022815255.1_01434	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JALGYR010000022.1	268	3342
GCA_022815255.1	GCA_022815255.1_01442	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	159	244	65.16	99.37	159	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NA	NA	JALGYR010000025.1	45	524
GCA_022815255.1	GCA_022815255.1_01492	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALGYR010000003.1	29457	30749
GCA_022815255.1	GCA_022815255.1_02608	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JALGYR010000009.1	45666	46163
GCA_023109465.1	GCA_023109465.1_00946	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_003505402.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JALDUL010000002.1	214933	216852
GCA_023109465.1	GCA_023109465.1_01394	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALDUL010000003.1	79553	81448
GCA_030180765.1	GCA_030180765.1_00502	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAMGTK010000013.1	47951	49870
GCA_016726305.1	GCA_016726305.1_02263	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	94.58	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP068174.1	2781097	2782428
GCA_016726305.1	GCA_016726305.1_02904	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	300	96.00	74.74	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP068174.1	3472022	3472912
GCA_005706435.1	GCA_005706435.1_00072	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP035541.1	70705	72711
GCA_005706435.1	GCA_005706435.1_00125	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP035541.1	119067	119468
GCA_005706435.1	GCA_005706435.1_00126	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP035541.1	119486	120775
GCA_005706435.1	GCA_005706435.1_00146	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP035541.1	139286	139678
GCA_005706435.1	GCA_005706435.1_00147	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP035541.1	139696	140988
GCA_005706435.1	GCA_005706435.1_00227	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP035541.1	214634	215926
GCA_005706435.1	GCA_005706435.1_00752	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP035541.1	758902	759399
GCA_005706435.1	GCA_005706435.1_01181	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP035541.1	1112497	1114416
GCA_005706435.1	GCA_005706435.1_01588	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP035541.1	1527937	1529376
GCA_005706435.1	GCA_005706435.1_01939	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP035541.1	1872500	1872880
GCA_005706435.1	GCA_005706435.1_01940	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP035541.1	1872870	1874627
GCA_005706435.1	GCA_005706435.1_01941	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.22	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP035541.1	1874734	1875579
GCA_005706435.1	GCA_005706435.1_02145	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP035541.1	2061770	2062411
GCA_005706435.1	GCA_005706435.1_02359	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP035541.1	2264194	2265660
GCA_005706435.1	GCA_005706435.1_02360	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP035541.1	2265759	2266658
GCA_005706435.1	GCA_005706435.1_02646	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	PARTIALP	167	180	82.22	98.65	148	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NA	NA	CP035541.1	2531055	2531558
GCA_005706435.1	GCA_005706435.1_02659	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP035541.1	2540394	2540732
GCA_005706435.1	GCA_005706435.1_02660	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	547	547	100.00	99.82	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP035541.1	2540790	2542433
GCA_005706435.1	GCA_005706435.1_02661	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP035541.1	2542515	2543165
GCA_005706435.1	GCA_005706435.1_02666	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP035541.1	2547410	2547808
GCA_005706435.1	GCA_005706435.1_02667	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP035541.1	2548031	2548774
GCA_005706435.1	GCA_005706435.1_02692	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP035541.1	2572260	2572994
GCA_013277505.1	GCA_013277505.1_01529	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	100.00	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMNC01000052.1	97	1230
GCA_013277505.1	GCA_013277505.1_01738	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMNC01000060.1	51	1970
GCA_013277505.1	GCA_013277505.1_01824	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	VMNC01000007.1	9855	10592
GCA_030815625.1	GCA_030815625.1_01718	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	266	267	94.76	54.15	253	WP_001082319.1	APH(3) family aminoglycoside O-phosphotransferase	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	JAUSWZ010000001.1	1805750	1806550
GCA_030815625.1	GCA_030815625.1_03228	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	82.52	57.63	118	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	JAUSWZ010000001.1	3463730	3464125
GCA_030815625.1	GCA_030815625.1_03313	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	295	99.66	89.80	294	WP_063842263.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAUSWZ010000001.1	3562392	3563276
GCA_030815625.1	GCA_030815625.1_04226	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	280	271	94.46	50.00	258	WP_064808881.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	JAUSWZ010000001.1	4507335	4508177
GCA_030815625.1	GCA_030815625.1_06046	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	399	399	94.99	54.86	381	WP_063855983.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	JAUSWZ010000001.1	6499882	6501081
GCA_002954055.1	GCA_002954055.1_00151	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP014132.1	182421	183488
GCA_002954055.1	GCA_002954055.1_00204	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP014132.1	242677	243105
GCA_002954055.1	GCA_002954055.1_00281	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP014132.1	332702	333049
GCA_002954055.1	GCA_002954055.1_00284	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP014132.1	335227	336516
GCA_002954055.1	GCA_002954055.1_01890	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP014132.1	1982506	1982886
GCA_002954055.1	GCA_002954055.1_01891	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP014132.1	1982876	1984633
GCA_002954055.1	GCA_002954055.1_01892	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP014132.1	1984740	1985585
GCA_002954055.1	GCA_002954055.1_02417	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP014130.1	3574	5040
GCA_002954055.1	GCA_002954055.1_02418	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP014130.1	5139	6038
GCA_002954055.1	GCA_002954055.1_02420	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP014130.1	7342	7902
GCA_002954055.1	GCA_002954055.1_02421	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP014130.1	8086	9630
GCA_000377625.1	GCA_000377625.1_01473	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	KB898331.1	12889	14079
GCA_001815375.1	GCA_001815375.1_00780	blaROB-1	broad-spectrum class A beta-lactamase ROB-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	305	305	100.00	100.00	305	WP_005618523.1	broad-spectrum class A beta-lactamase ROB-1	NF033568.1	ROB family class A beta-lactamase	KV820404.1	69	986
GCA_001815375.1	GCA_001815375.1_02143	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV820422.1	319039	320679
GCA_001314975.1	GCA_001314975.1_02110	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	99.55	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP012937.1	2599256	2600587
GCA_001314975.1	GCA_001314975.1_02444	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	45.63	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP012937.1	2966569	2966895
GCA_001314975.1	GCA_001314975.1_03602	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.33	76.12	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP012937.1	4411453	4412334
GCA_000505785.1	GCA_000505785.1_02309	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	153	147	97.28	46.53	144	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	AYPR01000020.1	526164	526625
GCA_024104955.1	GCA_024104955.1_01630	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTU010000005.1	164361	164771
GCA_003351945.1	GCA_003351945.1_01013	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_063856111.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP022615.1	1079873	1081792
GCA_001813755.1	GCA_001813755.1_00752	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV813889.1	157400	158254
GCA_001813755.1	GCA_001813755.1_01873	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV813932.1	2214	3638
GCA_009378685.1	GCA_009378685.1_01344	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCN01000020.1	54816	55757
GCA_029924965.1	GCA_029924965.1_00072	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREHX010000011.1	7306	8151
GCA_029924965.1	GCA_029924965.1_00073	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREHX010000011.1	8258	10015
GCA_029924965.1	GCA_029924965.1_00074	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREHX010000011.1	10005	10385
GCA_029924965.1	GCA_029924965.1_00229	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JAREHX010000014.1	8354	8971
GCA_029924965.1	GCA_029924965.1_00270	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.39	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAREHX010000015.1	12437	12997
GCA_029924965.1	GCA_029924965.1_00271	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	504	514	98.05	99.01	504	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAREHX010000015.1	13211	14725
GCA_029924965.1	GCA_029924965.1_00276	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	98.13	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAREHX010000016.1	288	611
GCA_029924965.1	GCA_029924965.1_01877	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREHX010000004.1	18943	20016
GCA_029924965.1	GCA_029924965.1_01920	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAREHX010000004.1	73419	73841
GCA_029924965.1	GCA_029924965.1_01978	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREHX010000004.1	137712	138059
GCA_029924965.1	GCA_029924965.1_01982	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHX010000004.1	140225	141514
GCA_029924965.1	GCA_029924965.1_02486	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHX010000007.1	60451	61740
GCA_002082765.1	GCA_002082765.1_00098	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	CP020566.1	109702	110196
GCA_001433955.1	GCA_001433955.1_00479	blaOXA-85	oxacillin-hydrolyzing class D beta-lactamase OXA-85	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	261	261	100.00	100.00	261	WP_032835180.1	oxacillin-hydrolyzing class D beta-lactamase OXA-85	NF000502.2	OXA-85 family oxacillin-hydrolyzing class D beta-lactamase	CP013121.1	500950	501735
GCA_003857115.1	GCA_003857115.1_00857	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	RCTN01000013.1	19841	20914
GCA_003857115.1	GCA_003857115.1_00969	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	RCTN01000013.1	162037	163326
GCA_003857115.1	GCA_003857115.1_00970	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	RCTN01000013.1	163344	163745
GCA_003857115.1	GCA_003857115.1_01083	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	RCTN01000017.1	60360	61649
GCA_003436905.1	GCA_003436905.1_01415	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	QSQZ01000003.1	126935	128854
GCA_000722775.1	GCA_000722775.1_00856	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JPFZ01000009.1	343304	344503
GCA_002091675.1	GCA_002091675.1_02678	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	410	414	95.89	71.36	398	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	BDAE01000010.1	101758	102990
GCA_002091675.1	GCA_002091675.1_03995	blaLUT-3	class A beta-lactamase LUT-3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	296	296	100.00	100.00	296	WP_063860829.1	class A beta-lactamase LUT-3	NF000324.2	LUT family class A beta-lactamase	BDAE01000021.1	17392	18282
GCA_002091675.1	GCA_002091675.1_04559	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	BDAE01000030.1	32574	33008
GCA_002091675.1	GCA_002091675.1_04560	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	BDAE01000030.1	33080	33430
GCA_002091675.1	GCA_002091675.1_04561	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	BDAE01000030.1	33443	33718
GCA_002091675.1	GCA_002091675.1_04562	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.57	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BDAE01000030.1	33790	35475
GCA_002091675.1	GCA_002091675.1_04563	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	BDAE01000030.1	35493	35858
GCA_002091675.1	GCA_002091675.1_04564	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	BDAE01000030.1	35855	36091
GCA_002091675.1	GCA_002091675.1_04779	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	58.62	261	WP_003161096.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	BDAE01000038.1	6241	7023
GCA_002091675.1	GCA_002091675.1_04840	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	HMM	964	949	99.16	87.20	945	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	BDAE01000040.1	10055	12949
GCA_015326085.1	GCA_015326085.1_01896	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	77.86	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP064058.1	1917001	1918293
GCA_003971325.1	GCA_003971325.1_01702	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	CP034662.1	1761156	1762097
GCA_014610855.1	GCA_014610855.1_01130	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	46.20	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PGGF01000004.1	863157	864599
GCA_014610855.1	GCA_014610855.1_02397	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.61	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	PGGF01000007.1	128742	130283
GCA_946997945.1	GCA_946997945.1_00475	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.43	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAMPXN010000002.1	115782	117260
GCA_025151385.1	GCA_025151385.1_00640	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP102287.1	661717	662682
GCA_025151385.1	GCA_025151385.1_00881	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP102287.1	957884	958210
GCA_025151385.1	GCA_025151385.1_01858	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP102287.1	2074467	2076392
GCA_030014105.1	GCA_030014105.1_00039	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	335	459	72.98	100.00	335	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NA	NA	CP118834.1	36249	37256
GCA_030014105.1	GCA_030014105.1_00050	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	PARTIALP	88	122	72.13	96.59	88	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP118834.1	47213	47479
GCA_030014105.1	GCA_030014105.1_00057	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP118834.1	54721	56727
GCA_030014105.1	GCA_030014105.1_00058	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP118834.1	56827	58584
GCA_030014105.1	GCA_030014105.1_00059	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP118834.1	58584	58955
GCA_030014105.1	GCA_030014105.1_00133	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP118834.1	129504	130793
GCA_030014105.1	GCA_030014105.1_00136	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP118834.1	132971	133318
GCA_030014105.1	GCA_030014105.1_00215	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP118834.1	215685	216113
GCA_030014105.1	GCA_030014105.1_01016	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP118834.1	944861	945502
GCA_030014105.1	GCA_030014105.1_01040	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	223	281	79.36	95.96	223	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033103.1	class A beta-lactamase	CP118834.1	969700	970371
GCA_030014105.1	GCA_030014105.1_01041	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP118834.1	970478	972235
GCA_030014105.1	GCA_030014105.1_01042	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP118834.1	972225	972605
GCA_022690425.1	GCA_022690425.1_00092	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCVO010000012.1	3717	5183
GCA_022690425.1	GCA_022690425.1_00095	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCVO010000012.1	6984	7364
GCA_022690425.1	GCA_022690425.1_00096	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCVO010000012.1	7354	9111
GCA_022690425.1	GCA_022690425.1_00097	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCVO010000012.1	9218	10063
GCA_022690425.1	GCA_022690425.1_01715	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.96	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALCVO010000003.1	8922	10565
GCA_022690425.1	GCA_022690425.1_01770	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	99.30	78.64	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVO010000003.1	56640	57929
GCA_022690425.1	GCA_022690425.1_01823	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVO010000003.1	114397	114744
GCA_022690425.1	GCA_022690425.1_01827	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVO010000003.1	118421	119713
GCA_000759045.1	GCA_000759045.1_01808	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.84	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JRNF01000051.1	14323	16248
GCA_000759045.1	GCA_000759045.1_02117	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JRNF01000104.1	1999	2799
GCA_022531845.1	GCA_022531845.1_00099	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP092857.1	108336	109118
GCA_022531845.1	GCA_022531845.1_00100	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP092857.1	109244	109975
GCA_022531845.1	GCA_022531845.1_00109	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP092857.1	116686	117057
GCA_022531845.1	GCA_022531845.1_00110	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP092857.1	117057	118814
GCA_022531845.1	GCA_022531845.1_00111	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP092857.1	118914	120920
GCA_022531845.1	GCA_022531845.1_00116	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP092857.1	124310	125053
GCA_022531845.1	GCA_022531845.1_00117	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP092857.1	125270	125674
GCA_022531845.1	GCA_022531845.1_00123	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP092857.1	130160	130582
GCA_022531845.1	GCA_022531845.1_00164	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP092857.1	183985	185058
GCA_022531845.1	GCA_022531845.1_00898	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP092857.1	935293	936732
GCA_022531845.1	GCA_022531845.1_00901	cfr	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	core	AMR	AMR	LINCOSAMIDE/OXAZOLIDINONE/PHENICOL/PLEUROMUTILIN/STREPTOGRAMIN	CHLORAMPHENICOL/CLINDAMYCIN/FLORFENICOL/LINEZOLID/STREPTOGRAMIN B/TIAMULIN/VIRGINIAMYCIN	BLASTP	349	349	100.00	99.71	349	WP_001010505.1	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	CP092857.1	938823	939872
GCA_022531845.1	GCA_022531845.1_00929	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP092857.1	963082	963567
GCA_022531845.1	GCA_022531845.1_00932	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP092857.1	965323	966762
GCA_022531845.1	GCA_022531845.1_01048	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092857.1	1046982	1048271
GCA_022531845.1	GCA_022531845.1_01367	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP092857.1	1343735	1344517
GCA_022531845.1	GCA_022531845.1_01368	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP092857.1	1344643	1345374
GCA_022531845.1	GCA_022531845.1_02615	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP092858.1	22953	23798
GCA_022531845.1	GCA_022531845.1_02616	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP092858.1	23905	25662
GCA_022531845.1	GCA_022531845.1_02617	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP092858.1	25652	26032
GCA_022531845.1	GCA_022531845.1_02638	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP092859.1	13047	14486
GCA_022531845.1	GCA_022531845.1_02643	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP092859.1	17104	17664
GCA_022531845.1	GCA_022531845.1_02644	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP092859.1	17848	19392
GCA_020555445.1	GCA_020555445.1_01956	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	331	300	97.00	50.17	291	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAJCIW010000005.1	119279	120274
GCA_020555445.1	GCA_020555445.1_02382	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAJCIW010000008.1	12814	14739
GCA_022068525.1	GCA_022068525.1_00894	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035260.1	860848	862047
GCA_000470865.1	GCA_000470865.1_00036	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP003604.1	40397	42403
GCA_000470865.1	GCA_000470865.1_00037	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP003604.1	42503	43489
GCA_000470865.1	GCA_000470865.1_00110	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP003604.1	123212	124570
GCA_000470865.1	GCA_000470865.1_00296	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP003604.1	343169	344524
GCA_000470865.1	GCA_000470865.1_00334	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	94.58	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP003604.1	379963	380574
GCA_000470865.1	GCA_000470865.1_00800	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.59	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP003604.1	848353	849081
GCA_000470865.1	GCA_000470865.1_00801	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.17	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP003604.1	849105	849833
GCA_000470865.1	GCA_000470865.1_00821	seb	staphylococcal enterotoxin type B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	AAA88550.1	staphylococcal enterotoxin type B	NA	NA	CP003604.1	860028	860828
GCA_000470865.1	GCA_000470865.1_01716	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP003604.1	1811951	1813243
GCA_000470865.1	GCA_000470865.1_01751	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP003604.1	1844128	1844478
GCA_000470865.1	GCA_000470865.1_01921	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	96.15	26	AGU62139.1	delta-hemolysin	NA	NA	CP003604.1	1986086	1986220
GCA_000470865.1	GCA_000470865.1_02074	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	PARTIALP	287	480	59.79	96.86	287	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP003604.1	2140827	2141690
GCA_000470865.1	GCA_000470865.1_02332	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP003604.1	2381788	2382753
GCA_000470865.1	GCA_000470865.1_02333	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.78	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP003604.1	2383321	2384268
GCA_000470865.1	GCA_000470865.1_02334	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP003604.1	2384270	2385247
GCA_000470865.1	GCA_000470865.1_02474	sey	staphylococcal enterotoxin type Y	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	221	221	100.00	99.55	221	BAS21358.1	staphylococcal enterotoxin type Y	NA	NA	CP003604.1	2532776	2533441
GCA_000470865.1	GCA_000470865.1_02570	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP003604.1	2635616	2637145
GCA_000470865.1	GCA_000470865.1_02606	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP003604.1	2683789	2684841
GCA_000011525.1	GCA_000011525.1_00046	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	BX571857.1	52820	53458
GCA_000011525.1	GCA_000011525.1_00052	seh	staphylococcal enterotoxin type H	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	241	241	100.00	100.00	241	AAA19777.1	staphylococcal enterotoxin type H	NA	NA	BX571857.1	60231	60956
GCA_000011525.1	GCA_000011525.1_00110	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	450	450	100.00	100.00	450	WP_001100294.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	BX571857.1	127810	129162
GCA_000011525.1	GCA_000011525.1_00314	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.33	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	BX571857.1	359090	360445
GCA_000011525.1	GCA_000011525.1_01759	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BX571857.1	1848281	1849573
GCA_000011525.1	GCA_000011525.1_01800	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA	BX571857.1	1884610	1885332
GCA_000011525.1	GCA_000011525.1_01801	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	99.57	235	ABD31004.1	serine protease SplA	NA	NA	BX571857.1	1885457	1886164
GCA_000011525.1	GCA_000011525.1_01811	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	BX571857.1	1897813	1898796
GCA_000011525.1	GCA_000011525.1_01812	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	BX571857.1	1898798	1899733
GCA_000011525.1	GCA_000011525.1_01969	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	BX571857.1	2026654	2027004
GCA_000011525.1	GCA_000011525.1_01973	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	BX571857.1	2028502	2028993
GCA_000011525.1	GCA_000011525.1_01977	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	BX571857.1	2030702	2031475
GCA_000011525.1	GCA_000011525.1_02025	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	98.76	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	BX571857.1	2065390	2066118
GCA_000011525.1	GCA_000011525.1_02026	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	99.59	97.10	241	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	BX571857.1	2066142	2066870
GCA_000011525.1	GCA_000011525.1_02045	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	96.15	26	AGU62139.1	delta-hemolysin	NA	NA	BX571857.1	2086804	2086938
GCA_000011525.1	GCA_000011525.1_02190	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.38	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	BX571857.1	2236608	2238050
GCA_000011525.1	GCA_000011525.1_02440	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	BX571857.1	2470537	2471502
GCA_000011525.1	GCA_000011525.1_02441	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	BX571857.1	2472070	2473017
GCA_000011525.1	GCA_000011525.1_02442	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	BX571857.1	2473019	2473996
GCA_000011525.1	GCA_000011525.1_02662	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	BX571857.1	2709540	2711069
GCA_000011525.1	GCA_000011525.1_02696	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	BX571857.1	2754977	2756029
GCA_000011525.1	GCA_000011525.1_02720	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	98.73	1183	BAB96477.1	collagen adhesin Cna	NA	NA	BX571857.1	2777716	2781267
GCA_000011525.1	GCA_000011525.1_02751	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	99.51	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	BX571858.1	8010	8627
GCA_000011525.1	GCA_000011525.1_02759	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	BX571858.1	13640	14020
GCA_000011525.1	GCA_000011525.1_02760	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.56	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	BX571858.1	14010	15767
GCA_000011525.1	GCA_000011525.1_02761	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733289.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	BX571858.1	15874	16719
GCA_002891235.1	GCA_002891235.1_00013	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	88.81	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	POWA01000006.1	10121	11014
GCA_002891235.1	GCA_002891235.1_02537	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	122	102	100.00	66.94	124	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	POWA01000006.1	2621159	2621527
GCA_002891235.1	GCA_002891235.1_03102	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	100.00	78.01	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	POWA01000006.1	3165558	3165989
GCA_002891235.1	GCA_002891235.1_03141	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.99	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	POWA01000006.1	3213626	3214741
GCA_002891235.1	GCA_002891235.1_03142	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	90.71	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	POWA01000006.1	3214883	3218542
GCA_002891235.1	GCA_002891235.1_03145	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	94.34	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	POWA01000006.1	3220958	3223132
GCA_002891235.1	GCA_002891235.1_04008	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	95.74	141	WP_038415208.1	fosfomycin resistance glutathione transferase FosA	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	POWA01000006.1	4115510	4115935
GCA_002891235.1	GCA_002891235.1_04146	ampC-Ecan	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	381	381	100.00	99.21	381	WP_006178946.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	NF041666.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	POWA01000006.1	4258201	4259346
GCA_001618905.1	GCA_001618905.1_01270	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP014786.1	1223270	1225189
GCA_001618905.1	GCA_001618905.1_02100	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	458	458	100.00	98.91	458	WP_002294500.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP014786.1	2029433	2030809
GCA_001618905.1	GCA_001618905.1_02145	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP014786.1	2064053	2064550
GCA_011038575.1	GCA_011038575.1_00242	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP035643.1	252900	254192
GCA_011038575.1	GCA_011038575.1_01042	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP035643.1	1070955	1071440
GCA_011038575.1	GCA_011038575.1_01053	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP035643.1	1083925	1085364
GCA_011038575.1	GCA_011038575.1_01263	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP035643.1	1313117	1313848
GCA_011038575.1	GCA_011038575.1_01264	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP035643.1	1313974	1314756
GCA_011038575.1	GCA_011038575.1_01534	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP035643.1	1577365	1577745
GCA_011038575.1	GCA_011038575.1_01535	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP035643.1	1577735	1579492
GCA_011038575.1	GCA_011038575.1_01536	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP035643.1	1579599	1580444
GCA_011038575.1	GCA_011038575.1_01557	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP035643.1	1599259	1599900
GCA_011038575.1	GCA_011038575.1_02220	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP035643.1	2265373	2266440
GCA_011038575.1	GCA_011038575.1_02272	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP035643.1	2325822	2326058
GCA_011038575.1	GCA_011038575.1_02352	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP035643.1	2416091	2416438
GCA_011038575.1	GCA_011038575.1_02356	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP035643.1	2420121	2421413
GCA_011038575.1	GCA_011038575.1_02375	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP035643.1	2438466	2439452
GCA_011038575.1	GCA_011038575.1_02376	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP035643.1	2439552	2441558
GCA_008693785.1	GCA_008693785.1_00088	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	91.53	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP044114.1	79237	80124
GCA_008693785.1	GCA_008693785.1_00089	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	PARTIALP	160	304	52.63	96.88	160	APX31172.1	heat resistance protein YfdX1	NA	NA	CP044114.1	80227	80709
GCA_008693785.1	GCA_008693785.1_03966	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	305	97.38	54.13	303	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP044117.1	3513470	3514390
GCA_019330185.1	GCA_019330185.1_00825	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073895.1	803838	804323
GCA_019330185.1	GCA_019330185.1_00828	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073895.1	806079	807518
GCA_019330185.1	GCA_019330185.1_00949	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073895.1	883146	883787
GCA_019330185.1	GCA_019330185.1_00970	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073895.1	902607	903452
GCA_019330185.1	GCA_019330185.1_00971	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073895.1	903559	905316
GCA_019330185.1	GCA_019330185.1_00972	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073895.1	905306	905686
GCA_019330185.1	GCA_019330185.1_02462	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073895.1	2422040	2423107
GCA_019330185.1	GCA_019330185.1_02513	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073895.1	2480905	2481141
GCA_019330185.1	GCA_019330185.1_02590	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073895.1	2563779	2564126
GCA_019330185.1	GCA_019330185.1_02593	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073895.1	2566295	2567593
GCA_019330185.1	GCA_019330185.1_02603	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073895.1	2576379	2577029
GCA_019330185.1	GCA_019330185.1_02604	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073895.1	2577111	2578754
GCA_019330185.1	GCA_019330185.1_02605	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073895.1	2578812	2579150
GCA_019330185.1	GCA_019330185.1_02651	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073895.1	2618116	2618487
GCA_019330185.1	GCA_019330185.1_02652	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073895.1	2618487	2620244
GCA_019330185.1	GCA_019330185.1_02653	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073895.1	2620344	2622350
GCA_019330185.1	GCA_019330185.1_02782	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073896.1	7682	8242
GCA_019330185.1	GCA_019330185.1_02783	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073896.1	8427	9971
GCA_008244525.1	GCA_008244525.1_00196	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VTFJ01000001.1	222805	224226
GCA_008244525.1	GCA_008244525.1_00371	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	VTFJ01000001.1	431684	432499
GCA_008244525.1	GCA_008244525.1_00373	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	VTFJ01000001.1	434538	434957
GCA_008244525.1	GCA_008244525.1_00374	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	209	278	75.18	99.52	209	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	VTFJ01000001.1	435164	435793
GCA_008244525.1	GCA_008244525.1_00375	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VTFJ01000001.1	435997	437172
GCA_008244525.1	GCA_008244525.1_00400	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.16	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VTFJ01000001.1	462771	464552
GCA_008244525.1	GCA_008244525.1_02001	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VTFJ01000007.1	3081	3935
GCA_018375015.1	GCA_018375015.1_00375	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAHAED010000026.1	775	1629
GCA_018375015.1	GCA_018375015.1_01724	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHAED010000016.1	1735	2145
GCA_000421205.1	GCA_000421205.1_00092	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	ATWK01000001.1	130593	131789
GCA_030515655.1	GCA_030515655.1_01964	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.77	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100362.1	2134901	2135755
GCA_019929925.1	GCA_019929925.1_00790	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZQK010000002.1	172804	173232
GCA_000178095.1	GCA_000178095.1_01356	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	ADJN01000018.1	41	1960
GCA_022690065.1	GCA_022690065.1_00779	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWC010000002.1	133858	135150
GCA_022690065.1	GCA_022690065.1_00783	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWC010000002.1	138833	139180
GCA_022690065.1	GCA_022690065.1_01496	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCWC010000004.1	256398	256778
GCA_022690065.1	GCA_022690065.1_01497	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCWC010000004.1	256768	258525
GCA_022690065.1	GCA_022690065.1_01498	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCWC010000004.1	258632	259477
GCA_000185385.1	GCA_000185385.1_01474	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	77.44	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	GL622296.1	1563143	1564621
GCA_021193625.2	GCA_021193625.2_00403	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	459	459	100.00	100.00	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP106817.1	390994	392373
GCA_021193625.2	GCA_021193625.2_01290	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	280	301	91.36	98.18	275	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP106817.1	1241675	1242517
GCA_021193625.2	GCA_021193625.2_01408	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	412	412	100.00	100.00	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP106817.1	1367301	1368539
GCA_021193625.2	GCA_021193625.2_01409	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	99.52	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP106817.1	1368790	1369422
GCA_021193625.2	GCA_021193625.2_01411	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	99.23	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP106817.1	1370059	1371627
GCA_021193625.2	GCA_021193625.2_01764	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	507	100.00	99.61	507	AAD54074.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP106817.1	1700196	1701719
GCA_011714745.1	GCA_011714745.1_00419	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_063856112.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RXXM01000018.1	40176	42095
GCA_011714745.1	GCA_011714745.1_00957	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXM01000028.1	28210	29343
GCA_011714745.1	GCA_011714745.1_01119	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RXXM01000031.1	1083	1820
GCA_013423845.1	GCA_013423845.1_01421	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP058970.1	1537709	1538164
GCA_013423845.1	GCA_013423845.1_01422	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP058970.1	1538236	1538586
GCA_013423845.1	GCA_013423845.1_01423	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	94.51	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP058970.1	1538602	1538877
GCA_013423845.1	GCA_013423845.1_01424	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	135	140	98.57	78.99	138	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP058970.1	1538905	1539312
GCA_013423845.1	GCA_013423845.1_01425	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	99.47	89.78	558	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP058970.1	1539351	1541033
GCA_013423845.1	GCA_013423845.1_01426	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP058970.1	1541051	1541416
GCA_013423845.1	GCA_013423845.1_01427	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	93.59	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP058970.1	1541413	1541649
GCA_013423845.1	GCA_013423845.1_02268	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	302	99.34	54.93	304	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP058970.1	2453946	2454857
GCA_013423845.1	GCA_013423845.1_02297	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	268	96.64	70.66	259	WP_114268491.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP058970.1	2488130	2488930
GCA_013423845.1	GCA_013423845.1_04450	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	275	94.91	59.39	261	WP_125064048.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP058970.1	4744962	4745744
GCA_013423845.1	GCA_013423845.1_05455	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	79.00	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP058970.1	5817430	5819118
GCA_013423845.1	GCA_013423845.1_05456	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	65.22	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP058970.1	5819130	5819408
GCA_018128145.1	GCA_018128145.1_00025	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072370.1	22222	23412
GCA_001591365.1	GCA_001591365.1_03380	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	82.52	56.78	118	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	BCUT01000002.1	392607	393002
GCA_001591365.1	GCA_001591365.1_03562	ant(3)	ANT(3)-I family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	HMM	269	262	97.71	66.02	256	WP_004356282.1	ANT(3)-I family aminoglycoside nucleotidyltransferase	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	BCUT01000002.1	586952	587761
GCA_001591365.1	GCA_001591365.1_03785	aac(3)-I	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	163	165	91.52	67.55	151	WP_063840260.1	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	BCUT01000002.1	812870	813361
GCA_001591365.1	GCA_001591365.1_05485	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	295	97.63	71.92	292	WP_063842263.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	BCUT01000007.1	316001	316900
GCA_000507765.1	GCA_000507765.1_00558	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KI669401.1	542841	544058
GCA_000507765.1	GCA_000507765.1_00559	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KI669401.1	544178	545641
GCA_000507765.1	GCA_000507765.1_00962	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	KI669401.1	972284	974020
GCA_000507765.1	GCA_000507765.1_00963	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.39	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	KI669401.1	974022	975746
GCA_001640865.1	GCA_001640865.1_01821	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP011531.1	2334067	2335992
GCA_001640865.1	GCA_001640865.1_02561	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	CP011531.1	3248956	3250161
GCA_001640865.1	GCA_001640865.1_02562	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	CP011531.1	3250186	3250698
GCA_001640865.1	GCA_001640865.1_03536	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	308	300	98.00	51.85	297	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP011531.1	4306307	4307233
GCA_016028715.1	GCA_016028715.1_00505	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.66	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP065726.1	516578	517816
GCA_016028715.1	GCA_016028715.1_01241	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP065726.1	1275966	1277345
GCA_016028715.1	GCA_016028715.1_01667	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.64	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP065726.1	1680191	1681717
GCA_009707995.1	GCA_009707995.1_01773	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	VIOF01000004.1	114495	116036
GCA_009707995.1	GCA_009707995.1_01774	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VIOF01000004.1	116242	117096
GCA_001838325.1	GCA_001838325.1_00233	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV836280.1	69316	70170
GCA_001838325.1	GCA_001838325.1_00611	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	45.03	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV836284.1	83030	84454
GCA_963393175.1	GCA_963393175.1_00424	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJOB010000002.1	124550	126076
GCA_963393175.1	GCA_963393175.1_00641	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJOB010000003.1	80624	81862
GCA_963393175.1	GCA_963393175.1_00642	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJOB010000003.1	81879	82742
GCA_963393175.1	GCA_963393175.1_00849	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJOB010000004.1	77013	78392
GCA_963393175.1	GCA_963393175.1_01765	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	303	301	99.67	94.33	300	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJOB010000012.1	23496	24407
GCA_016117815.1	GCA_016117815.1_01797	cblA	CblA family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	296	296	100.00	100.00	296	WP_005827792.1	CblA family class A beta-lactamase	NF033098.1	CblA family class A beta-lactamase	CP065889.1	2197722	2198612
GCA_003492345.1	GCA_003492345.1_00859	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQML01000002.1	413244	414149
GCA_003492345.1	GCA_003492345.1_01427	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.90	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQML01000005.1	25292	26530
GCA_003492345.1	GCA_003492345.1_01431	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	QQML01000005.1	28201	29769
GCA_003492345.1	GCA_003492345.1_01898	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQML01000008.1	48975	50501
GCA_011058735.1	GCA_011058735.1_00944	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP049226.1	928407	930326
GCA_011058735.1	GCA_011058735.1_01022	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	86.79	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP049226.1	1021327	1022805
GCA_003351585.1	GCA_003351585.1_01421	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.77	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031254.1	1418488	1419882
GCA_003351585.1	GCA_003351585.1_01745	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	97.56	43.33	120	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP031254.1	1707475	1707840
GCA_003571725.1	GCA_003571725.1_02535	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	209	281	74.38	99.52	209	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033103.1	class A beta-lactamase	CP032158.1	192	821
GCA_003571725.1	GCA_003571725.1_02558	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP032158.1	20357	21823
GCA_003571725.1	GCA_003571725.1_02561	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP032158.1	23628	24008
GCA_003571725.1	GCA_003571725.1_02562	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP032158.1	23998	25755
GCA_000009005.1	GCA_000009005.1_00032	selZ	staphylococcal enterotoxin type Z	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	259	259	100.00	95.75	259	SUK32596.1	staphylococcal enterotoxin type Z	NA	NA	AJ938182.1	36930	37709
GCA_000009005.1	GCA_000009005.1_00084	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	AJ938182.1	95230	96588
GCA_000009005.1	GCA_000009005.1_00306	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.23	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	AJ938182.1	334767	336122
GCA_000009005.1	GCA_000009005.1_00342	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	AJ938182.1	369384	369995
GCA_000009005.1	GCA_000009005.1_00382	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	96.58	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	AJ938182.1	399750	400454
GCA_000009005.1	GCA_000009005.1_00385	sec1	staphylococcal enterotoxin type C1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	266	266	100.00	98.87	266	CAA29260.1	staphylococcal enterotoxin type C1	NA	NA	AJ938182.1	402667	403467
GCA_000009005.1	GCA_000009005.1_00386	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	AJ938182.1	403634	404356
GCA_000009005.1	GCA_000009005.1_01745	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.65	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AJ938182.1	1777941	1779233
GCA_000009005.1	GCA_000009005.1_01790	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	95.83	240	ABD31003.1	serine protease SplB	NA	NA	AJ938182.1	1817428	1818150
GCA_000009005.1	GCA_000009005.1_01791	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	183	235	77.87	96.17	183	ABD31004.1	serine protease SplA	NA	NA	AJ938182.1	1818275	1818826
GCA_000009005.1	GCA_000009005.1_01803	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.04	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	AJ938182.1	1831611	1832546
GCA_000009005.1	GCA_000009005.1_01810	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	96.41	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	AJ938182.1	1839538	1840293
GCA_000009005.1	GCA_000009005.1_01811	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	99.23	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	AJ938182.1	1840332	1841117
GCA_000009005.1	GCA_000009005.1_01812	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	96.28	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	AJ938182.1	1841271	1841999
GCA_000009005.1	GCA_000009005.1_01814	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	153	239	61.92	93.92	148	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	AJ938182.1	1842206	1842667
GCA_000009005.1	GCA_000009005.1_02223	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.29	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	AJ938182.1	2193362	2194804
GCA_000009005.1	GCA_000009005.1_02481	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	AJ938182.1	2430659	2431624
GCA_000009005.1	GCA_000009005.1_02482	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	AJ938182.1	2432192	2433139
GCA_000009005.1	GCA_000009005.1_02602	sey	staphylococcal enterotoxin type Y	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	221	221	100.00	100.00	221	BAS21358.1	staphylococcal enterotoxin type Y	NA	NA	AJ938182.1	2556895	2557560
GCA_000009005.1	GCA_000009005.1_02696	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	AJ938182.1	2656287	2657816
GCA_000009005.1	GCA_000009005.1_02734	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AJ938182.1	2699714	2700766
GCA_003384615.1	GCA_003384615.1_02636	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	PCZR01000004.1	70123	70545
GCA_030219285.1	GCA_030219285.1_00342	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JASOSC010000001.1	320701	321432
GCA_030219285.1	GCA_030219285.1_01614	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JASOSC010000006.1	39452	41371
GCA_013276335.1	GCA_013276335.1_00887	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	VMKV01000031.1	40347	41084
GCA_013276335.1	GCA_013276335.1_00898	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.90	639	WP_000691746.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMKV01000031.1	50991	52910
GCA_013276335.1	GCA_013276335.1_01592	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMKV01000057.1	13734	14867
GCA_000025205.1	GCA_000025205.1_00480	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP001849.1	543286	544764
GCA_000025205.1	GCA_000025205.1_00854	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP001849.1	987304	988521
GCA_000025205.1	GCA_000025205.1_00855	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP001849.1	988641	990104
GCA_018373215.1	GCA_018373215.1_00284	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JAHAHO010000001.1	252525	253919
GCA_002901765.1	GCA_002901765.1_01476	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPPW01000005.1	288404	289696
GCA_030180945.1	GCA_030180945.1_02282	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JARWID010000003.1	6356	7171
GCA_030180945.1	GCA_030180945.1_02283	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JARWID010000003.1	7232	8035
GCA_030180945.1	GCA_030180945.1_02284	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JARWID010000003.1	8035	8871
GCA_030180945.1	GCA_030180945.1_02285	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JARWID010000003.1	9373	10233
GCA_002871615.1	GCA_002871615.1_00197	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	PNGT01000001.1	185520	186737
GCA_002871615.1	GCA_002871615.1_00198	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	PNGT01000001.1	186857	188320
GCA_000738255.1	GCA_000738255.1_00329	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JFCJ01000010.1	2009	3790
GCA_000738255.1	GCA_000738255.1_01791	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.18	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCJ01000077.1	27113	27967
GCA_000426585.1	GCA_000426585.1_00123	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	AUFQ01000001.1	137917	139842
GCA_000426585.1	GCA_000426585.1_01301	nimI	5-nitroimidazole reductase NimI	core	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	BLASTP	161	172	93.60	98.14	161	WP_021588763.1	5-nitroimidazole reductase NimI	NF000262.1	NimIJ family 5-nitroimidazole reductase	AUFQ01000007.1	10658	11143
GCA_900475885.1	GCA_900475885.1_01397	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LS483429.1	1308274	1309668
GCA_009730515.1	GCA_009730515.1_00832	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP046335.1	798088	799287
GCA_009730515.1	GCA_009730515.1_01554	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP046335.1	1578664	1580322
GCA_014196225.1	GCA_014196225.1_00680	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	79.67	43.88	98	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACIDI010000003.1	206819	207172
GCA_900573895.1	GCA_900573895.1_01831	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	92.31	66.67	204	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	UPSF01000002.1	292358	293005
GCA_030408555.1	GCA_030408555.1_01011	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP047048.1	1039547	1040971
GCA_016728105.1	GCA_016728105.1_00027	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	CP068158.1	24724	25170
GCA_016728105.1	GCA_016728105.1_00030	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP068158.1	27295	28149
GCA_016728105.1	GCA_016728105.1_00234	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP068158.1	234949	236391
GCA_918258265.1	GCA_918258265.1_01396	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.56	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	OU901070.1	1920602	1921483
GCA_918258265.1	GCA_918258265.1_01710	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	43.27	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	OU901070.1	2268736	2269062
GCA_918258265.1	GCA_918258265.1_03021	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	91.87	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	OU901070.1	3807976	3809307
GCA_002073575.2	GCA_002073575.2_00551	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP020420.2	544627	546006
GCA_002073575.2	GCA_002073575.2_01610	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.21	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP020420.2	1597336	1598862
GCA_002073575.2	GCA_002073575.2_01802	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP020420.2	1798893	1800461
GCA_002073575.2	GCA_002073575.2_01804	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP020420.2	1801284	1801916
GCA_002073575.2	GCA_002073575.2_01805	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.57	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP020420.2	1802320	1803558
GCA_002073575.2	GCA_002073575.2_01980	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP020420.2	1975352	1976257
GCA_019928935.1	GCA_019928935.1_01304	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHZOS010000003.1	35743	37662
GCA_003943245.1	GCA_003943245.1_01646	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJOY01000041.1	1256	1684
GCA_000263775.1	GCA_000263775.1_01051	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AJTH01000004.1	59520	59942
GCA_000263775.1	GCA_000263775.1_01102	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AJTH01000004.1	119142	120215
GCA_000263775.1	GCA_000263775.1_01861	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AJTH01000007.1	55741	57030
GCA_000263775.1	GCA_000263775.1_02377	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	AJTH01000018.1	5533	5928
GCA_000263775.1	GCA_000263775.1_02378	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AJTH01000018.1	5945	7237
GCA_000263775.1	GCA_000263775.1_02382	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AJTH01000018.1	10920	11267
GCA_030229545.1	GCA_030229545.1_00195	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPIH010000014.1	4140	4994
GCA_030229545.1	GCA_030229545.1_00199	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPIH010000014.1	6716	8137
GCA_030229545.1	GCA_030229545.1_00243	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.26	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPIH010000017.1	2061	3485
GCA_028609885.1	GCA_028609885.1_00426	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP063195.1	492019	493800
GCA_028609885.1	GCA_028609885.1_00430	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP063195.1	497313	499094
GCA_028609885.1	GCA_028609885.1_00647	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	483	513	94.15	96.69	483	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CP063195.1	738878	740329
GCA_028609885.1	GCA_028609885.1_01522	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP063195.1	1708811	1709986
GCA_028609885.1	GCA_028609885.1_01554	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.13	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP063195.1	1737731	1738585
GCA_028609885.1	GCA_028609885.1_01559	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP063195.1	1743045	1744466
GCA_028609885.1	GCA_028609885.1_01847	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP063195.1	2038390	2039565
GCA_024204765.1	GCA_024204765.1_00034	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP093179.1	38097	38495
GCA_024204765.1	GCA_024204765.1_00035	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP093179.1	38718	39461
GCA_024204765.1	GCA_024204765.1_00040	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP093179.1	42811	44817
GCA_024204765.1	GCA_024204765.1_00041	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP093179.1	44917	46674
GCA_024204765.1	GCA_024204765.1_00042	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP093179.1	46674	47045
GCA_024204765.1	GCA_024204765.1_00086	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP093179.1	82498	83148
GCA_024204765.1	GCA_024204765.1_00087	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP093179.1	83230	84873
GCA_024204765.1	GCA_024204765.1_00088	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	CP093179.1	84931	85266
GCA_024204765.1	GCA_024204765.1_00112	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093179.1	106489	107220
GCA_024204765.1	GCA_024204765.1_00113	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093179.1	107346	108128
GCA_024204765.1	GCA_024204765.1_00658	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093179.1	647929	648660
GCA_024204765.1	GCA_024204765.1_00659	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093179.1	648786	649568
GCA_024204765.1	GCA_024204765.1_01421	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093179.1	1433437	1434168
GCA_024204765.1	GCA_024204765.1_01422	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093179.1	1434294	1435076
GCA_024204765.1	GCA_024204765.1_01742	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093179.1	1734296	1734676
GCA_024204765.1	GCA_024204765.1_01743	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093179.1	1734666	1736423
GCA_024204765.1	GCA_024204765.1_01744	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093179.1	1736530	1737375
GCA_024204765.1	GCA_024204765.1_01864	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP093179.1	1817121	1818560
GCA_024204765.1	GCA_024204765.1_01867	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP093179.1	1820316	1820801
GCA_024204765.1	GCA_024204765.1_02381	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093179.1	2328909	2329691
GCA_024204765.1	GCA_024204765.1_02382	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093179.1	2329817	2330548
GCA_024204765.1	GCA_024204765.1_02560	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP093179.1	2540031	2541098
GCA_024204765.1	GCA_024204765.1_02610	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP093179.1	2598895	2599131
GCA_024204765.1	GCA_024204765.1_02688	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP093179.1	2680836	2681183
GCA_024204765.1	GCA_024204765.1_02691	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP093179.1	2683361	2684650
GCA_024204765.1	GCA_024204765.1_02737	fosD	fosfomycin resistance bacillithiol transferase FosD	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000616116.1	fosfomycin resistance bacillithiol transferase FosD	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP093180.1	15929	16348
GCA_024204765.1	GCA_024204765.1_02741	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP093180.1	18337	18897
GCA_024204765.1	GCA_024204765.1_02742	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP093180.1	19081	20625
GCA_900638695.1	GCA_900638695.1_00021	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LR134536.1	15520	17526
GCA_900638695.1	GCA_900638695.1_00022	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	LR134536.1	17626	19383
GCA_900638695.1	GCA_900638695.1_00023	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	LR134536.1	19383	19754
GCA_900638695.1	GCA_900638695.1_00069	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	LR134536.1	58720	59058
GCA_900638695.1	GCA_900638695.1_00070	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LR134536.1	59116	60759
GCA_900638695.1	GCA_900638695.1_00071	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	LR134536.1	60841	61491
GCA_900638695.1	GCA_900638695.1_00080	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR134536.1	68945	70243
GCA_900638695.1	GCA_900638695.1_00083	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LR134536.1	72412	72759
GCA_900638695.1	GCA_900638695.1_00160	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	LR134536.1	155128	155364
GCA_900638695.1	GCA_900638695.1_00211	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	LR134536.1	213162	214229
GCA_900638695.1	GCA_900638695.1_01695	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LR134536.1	1727672	1728052
GCA_900638695.1	GCA_900638695.1_01696	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LR134536.1	1728042	1729799
GCA_900638695.1	GCA_900638695.1_01697	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LR134536.1	1729906	1730751
GCA_900638695.1	GCA_900638695.1_01718	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	LR134536.1	1749571	1750212
GCA_900638695.1	GCA_900638695.1_01839	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	LR134536.1	1825840	1827279
GCA_900638695.1	GCA_900638695.1_01842	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	LR134536.1	1829034	1829519
GCA_004291175.2	GCA_004291175.2_01048	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	62	25	100.00	92.00	25	AAC21574.1	delta-hemolysin	NA	NA	CP068031.1	864518	864706
GCA_019929745.1	GCA_019929745.1_00166	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZQB010000001.1	167778	168206
GCA_017570505.1	GCA_017570505.1_00248	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	295	303	88.45	40.30	268	WP_041881964.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP071886.1	287280	288167
GCA_017570505.1	GCA_017570505.1_01859	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002321849.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP071886.1	2188747	2189484
GCA_003462285.1	GCA_003462285.1_00097	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.25	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	QTYS01000001.1	76664	77464
GCA_003462285.1	GCA_003462285.1_02987	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	170	170	100.00	99.41	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	QTYS01000049.1	1899	2411
GCA_003462285.1	GCA_003462285.1_02988	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	QTYS01000049.1	2436	3641
GCA_003462285.1	GCA_003462285.1_03384	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	QTYS01000007.1	58116	59075
GCA_005844225.1	GCA_005844225.1_00116	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	SPHG01000012.1	2741	3706
GCA_005844225.1	GCA_005844225.1_01782	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	170	170	100.00	99.41	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	SPHG01000003.1	508179	508691
GCA_005844225.1	GCA_005844225.1_01783	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	SPHG01000003.1	508716	509921
GCA_020558055.1	GCA_020558055.1_00183	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAJCJY010000010.1	7684	8415
GCA_020558055.1	GCA_020558055.1_01324	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.06	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAJCJY010000036.1	2776	4254
GCA_020558055.1	GCA_020558055.1_01673	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAJCJY010000006.1	70785	72704
GCA_030225585.1	GCA_030225585.1_01351	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JASOZM010000049.1	1316	3235
GCA_020907165.1	GCA_020907165.1_00040	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003264.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JAJJQE010000011.1	1386	2120
GCA_020907165.1	GCA_020907165.1_01894	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJJQE010000004.1	7273	8562
GCA_020907165.1	GCA_020907165.1_01895	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAJJQE010000004.1	8580	8981
GCA_020907165.1	GCA_020907165.1_02101	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAJJQE010000005.1	19526	20599
GCA_020907165.1	GCA_020907165.1_02369	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJJQE010000007.1	60525	61814
GCA_000963345.1	GCA_000963345.1_01532	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.90	639	WP_000691737.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JYOZ01000006.1	278988	280907
GCA_022347345.1	GCA_022347345.1_01298	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAKRNC010000035.1	88	903
GCA_022347345.1	GCA_022347345.1_01727	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAKRNC010000004.1	183079	184254
GCA_022347345.1	GCA_022347345.1_01729	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAKRNC010000004.1	184458	185294
GCA_022347345.1	GCA_022347345.1_01730	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JAKRNC010000004.1	185294	185713
GCA_016026915.1	GCA_016026915.1_00546	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.31	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP065656.1	531303	532148
GCA_016026915.1	GCA_016026915.1_00547	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.21	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP065656.1	532255	534012
GCA_016026915.1	GCA_016026915.1_00548	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP065656.1	534002	534382
GCA_016026915.1	GCA_016026915.1_01950	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP065656.1	1974377	1974805
GCA_016026915.1	GCA_016026915.1_02030	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP065656.1	2063802	2064149
GCA_016026915.1	GCA_016026915.1_02033	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP065656.1	2066327	2067616
GCA_016026915.1	GCA_016026915.1_02077	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP065656.1	2108697	2109347
GCA_016026915.1	GCA_016026915.1_02078	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP065656.1	2109429	2111072
GCA_016026915.1	GCA_016026915.1_02079	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	CP065656.1	2111130	2111465
GCA_016026915.1	GCA_016026915.1_02438	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP065654.1	2736	4115
GCA_016026915.1	GCA_016026915.1_02538	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP065660.1	9913	10758
GCA_016026915.1	GCA_016026915.1_02539	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.15	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP065660.1	10865	12622
GCA_016026915.1	GCA_016026915.1_02540	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP065660.1	12612	12992
GCA_016026915.1	GCA_016026915.1_02571	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	164	281	58.36	99.39	164	WP_000733275.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	NA	CP065660.1	36919	37413
GCA_016026915.1	GCA_016026915.1_02574	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP065660.1	39604	39984
GCA_000740775.1	GCA_000740775.1_02942	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	74.96	46.03	478	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JFGS01000027.1	3587	5029
GCA_024181185.1	GCA_024181185.1_00110	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	93.21	65.53	206	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP051196.1	121941	122588
GCA_005696695.1	GCA_005696695.1_01589	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP040006.1	1799611	1800465
GCA_030223965.1	GCA_030223965.1_00215	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JASOTL010000001.1	162653	164572
GCA_030223965.1	GCA_030223965.1_01755	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JASOTL010000008.1	50284	51015
GCA_024296025.1	GCA_024296025.1_00205	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOO010000001.1	191440	191868
GCA_024296025.1	GCA_024296025.1_00210	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOO010000001.1	193609	195072
GCA_024296025.1	GCA_024296025.1_00211	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOO010000001.1	195192	196409
GCA_024296025.1	GCA_024296025.1_01122	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCOO010000003.1	302711	304606
GCA_024296025.1	GCA_024296025.1_01275	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCOO010000004.1	111454	113178
GCA_024296025.1	GCA_024296025.1_01276	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCOO010000004.1	113180	114916
GCA_024296025.1	GCA_024296025.1_01593	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCOO010000005.1	180663	182582
GCA_902364015.1	GCA_902364015.1_00372	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CABJCF010000001.1	368100	368837
GCA_001552395.1	GCA_001552395.1_00800	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BCRC01000003.1	232873	234297
GCA_001593525.1	GCA_001593525.1_00503	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LBFD01000037.1	101698	103356
GCA_006439215.1	GCA_006439215.1_01583	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.26	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	SDPD01000009.1	182178	183572
GCA_013344645.1	GCA_013344645.1_02089	lsa(A)	ABC-F type ribosomal protection protein Lsa(A)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	EXACTP	498	498	100.00	100.00	498	WP_002365053.1	ABC-F type ribosomal protection protein Lsa(A)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP046112.1	2085967	2087463
GCA_013344645.1	GCA_013344645.1_02172	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	234	233	99.57	67.09	234	WP_003436401.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	CP046112.1	2164095	2164799
GCA_013344645.1	GCA_013344645.1_02233	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP046112.1	2221559	2223478
GCA_013344645.1	GCA_013344645.1_02519	cadC	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	119	119	100.00	100.00	119	BCA86950.1	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP046112.1	2528180	2528539
GCA_013344645.1	GCA_013344645.1_02520	cadA	cadmium-translocating P-type ATPase CadA	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	705	705	100.00	99.86	705	BCA86951.1	cadmium-translocating P-type ATPase CadA	NA	NA	CP046112.1	2528536	2530653
GCA_000763725.1	GCA_000763725.1_00462	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JQHA01000003.1	122869	124161
GCA_000763725.1	GCA_000763725.1_00542	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.87	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JQHA01000003.1	197580	198872
GCA_000763725.1	GCA_000763725.1_00543	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JQHA01000003.1	198890	199282
GCA_000763725.1	GCA_000763725.1_00549	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JQHA01000004.1	3793	5259
GCA_000763725.1	GCA_000763725.1_00550	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JQHA01000004.1	5358	6257
GCA_000763725.1	GCA_000763725.1_00552	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JQHA01000004.1	7556	8116
GCA_000763725.1	GCA_000763725.1_00553	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JQHA01000004.1	8300	9844
GCA_000763725.1	GCA_000763725.1_00956	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JQHA01000008.1	45092	47098
GCA_000763725.1	GCA_000763725.1_00967	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JQHA01000008.1	55924	56271
GCA_000763725.1	GCA_000763725.1_00971	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JQHA01000008.1	59957	61246
GCA_000763725.1	GCA_000763725.1_01907	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JQHA01000024.1	42109	42954
GCA_000763725.1	GCA_000763725.1_01908	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.06	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JQHA01000024.1	43061	44818
GCA_000763725.1	GCA_000763725.1_01909	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.83	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JQHA01000024.1	44808	45188
GCA_013747035.1	GCA_013747035.1_00445	blaACT-55	cephalosporin-hydrolyzing class C beta-lactamase ACT-55	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	381	381	100.00	100.00	381	WP_047052637.1	cephalosporin-hydrolyzing class C beta-lactamase ACT-55	NF000385.4	ACT family cephalosporin-hydrolyzing class C beta-lactamase	CP056707.1	437310	438455
GCA_013747035.1	GCA_013747035.1_01523	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	99.29	87.86	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP056707.1	1521258	1521689
GCA_013747035.1	GCA_013747035.1_02124	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	101	102	100.00	77.14	105	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP056707.1	2080146	2080451
GCA_013747035.1	GCA_013747035.1_02139	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	225	217	94.01	65.37	205	WP_063843208.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP056707.1	2095992	2096669
GCA_013747035.1	GCA_013747035.1_03222	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	100.00	96.38	1050	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP056707.1	3243162	3246314
GCA_013747035.1	GCA_013747035.1_04387	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	92.36	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	CP056707.1	4359822	4360256
GCA_013747035.1	GCA_013747035.1_04388	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP056707.1	4360474	4361874
GCA_013747035.1	GCA_013747035.1_04389	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP056707.1	4361871	4362551
GCA_013747035.1	GCA_013747035.1_04390	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP056707.1	4362606	4363535
GCA_013747035.1	GCA_013747035.1_04391	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP056707.1	4363540	4363920
GCA_013747035.1	GCA_013747035.1_04392	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP056707.1	4363960	4364856
GCA_013747035.1	GCA_013747035.1_04393	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.83	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP056707.1	4364856	4366673
GCA_013747035.1	GCA_013747035.1_04397	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	813	824	98.79	98.28	814	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP056707.1	4368655	4371096
GCA_013747035.1	GCA_013747035.1_04399	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	99.43	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP056707.1	4371751	4374897
GCA_013747035.1	GCA_013747035.1_04400	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	98.37	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP056707.1	4374908	4376200
GCA_013747035.1	GCA_013747035.1_04401	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP056707.1	4376314	4376667
GCA_013747035.1	GCA_013747035.1_04402	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.26	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP056707.1	4376696	4378081
GCA_013747035.1	GCA_013747035.1_04403	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	99.56	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP056707.1	4378271	4378951
GCA_013747035.1	GCA_013747035.1_04404	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	493	491	100.00	97.56	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP056707.1	4378944	4380425
GCA_013747035.1	GCA_013747035.1_04405	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	EXACTP	143	143	100.00	100.00	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP056707.1	4380670	4381101
GCA_013747035.1	GCA_013747035.1_04571	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	294	300	97.33	90.41	292	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	CP056707.1	4572194	4573078
GCA_013747035.1	GCA_013747035.1_04714	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	99.47	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	CP056708.1	15324	15893
GCA_013747035.1	GCA_013747035.1_04715	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	98.63	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP056708.1	15999	18848
GCA_013747035.1	GCA_013747035.1_04719	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	EXACTP	152	152	100.00	100.00	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	CP056708.1	20015	20473
GCA_013747035.1	GCA_013747035.1_04720	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.01	304	APX31172.1	heat resistance protein YfdX1	NA	NA	CP056708.1	20496	21410
GCA_013747035.1	GCA_013747035.1_04721	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	98.98	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP056708.1	21513	22400
GCA_013747035.1	GCA_013747035.1_04722	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	98.03	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CP056708.1	22490	23101
GCA_013747035.1	GCA_013747035.1_04724	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	EXACTP	146	146	100.00	100.00	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	CP056708.1	24316	24756
GCA_013747035.1	GCA_013747035.1_04725	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	571	571	100.00	99.12	571	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	CP056708.1	24760	26475
GCA_013747035.1	GCA_013747035.1_04726	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	95.76	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	CP056708.1	26472	26969
GCA_000232985.2	GCA_000232985.2_01348	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AGPU01000002.1	323452	325242
GCA_000232985.2	GCA_000232985.2_01790	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AGPU01000001.1	162968	164431
GCA_000232985.2	GCA_000232985.2_01791	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AGPU01000001.1	164452	165669
GCA_030515835.1	GCA_030515835.1_01943	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.42	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100371.1	2080848	2081702
GCA_001228845.1	GCA_001228845.1_00700	fosD	fosfomycin resistance bacillithiol transferase FosD	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000616116.1	fosfomycin resistance bacillithiol transferase FosD	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CUFO01000002.1	149285	149704
GCA_001228845.1	GCA_001228845.1_01151	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CUFO01000004.1	116365	117147
GCA_001228845.1	GCA_001228845.1_01152	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CUFO01000004.1	117273	118004
GCA_001228845.1	GCA_001228845.1_01389	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.79	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUFO01000006.1	80515	81807
GCA_001228845.1	GCA_001228845.1_01680	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	96.10	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CUFO01000009.1	53881	54498
GCA_001228845.1	GCA_001228845.1_02181	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CUFO01000015.1	15391	15771
GCA_001228845.1	GCA_001228845.1_02182	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CUFO01000015.1	15761	17518
GCA_001228845.1	GCA_001228845.1_02183	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CUFO01000015.1	17625	18470
GCA_001228845.1	GCA_001228845.1_02257	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUFO01000016.1	39884	41176
GCA_001228845.1	GCA_001228845.1_02261	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CUFO01000016.1	43339	43686
GCA_001228845.1	GCA_001228845.1_02515	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	97.54	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CUFO01000024.1	2452	2820
GCA_001228845.1	GCA_001228845.1_02518	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CUFO01000024.1	4668	5048
GCA_001228845.1	GCA_001228845.1_02526	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CUFO01000026.1	739	2745
GCA_001228845.1	GCA_001228845.1_02537	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	CUFO01000029.1	1171	1494
GCA_001228845.1	GCA_001228845.1_02539	fosB	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	97.84	139	WP_053032028.1	fosfomycin resistance bacillithiol transferase FosB4	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	CUFO01000030.1	21	440
GCA_022486125.1	GCA_022486125.1_01553	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAKVFR010000035.1	6523	7902
GCA_022486125.1	GCA_022486125.1_01555	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JAKVFR010000035.1	8882	9625
GCA_022486125.1	GCA_022486125.1_01559	catA	type A-8 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	215	215	100.00	100.00	215	WP_000143686.1	type A-8 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JAKVFR010000036.1	3242	3889
GCA_022486125.1	GCA_022486125.1_02455	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFR010000009.1	3461	4753
GCA_022486125.1	GCA_022486125.1_02532	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	95.10	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFR010000009.1	74472	75764
GCA_022486125.1	GCA_022486125.1_02533	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVFR010000009.1	75782	76183
GCA_016028175.1	GCA_016028175.1_01150	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP065706.1	1172977	1173405
GCA_016028175.1	GCA_016028175.1_01160	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP065706.1	1181294	1182757
GCA_016028175.1	GCA_016028175.1_01161	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP065706.1	1182877	1184094
GCA_000314795.2	GCA_000314795.2_00003	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KB373314.1	1107	2324
GCA_000314795.2	GCA_000314795.2_00004	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KB373314.1	2444	3907
GCA_000314795.2	GCA_000314795.2_00013	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KB373314.1	9818	10246
GCA_000314795.2	GCA_000314795.2_00293	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KB373314.1	256664	257881
GCA_000314795.2	GCA_000314795.2_00294	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KB373314.1	258001	259464
GCA_000314795.2	GCA_000314795.2_00572	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KB373314.1	533488	535128
GCA_000314795.2	GCA_000314795.2_02248	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KB373316.1	384977	386194
GCA_000314795.2	GCA_000314795.2_02249	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KB373316.1	386314	387777
GCA_003944415.1	GCA_003944415.1_00356	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJMH01000001.1	344504	344932
GCA_003944415.1	GCA_003944415.1_01360	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	RJMH01000003.1	16169	17809
GCA_008693965.1	GCA_008693965.1_00994	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	58.62	261	WP_003161096.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP044086.1	1028064	1028846
GCA_008693965.1	GCA_008693965.1_01658	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	410	414	95.89	71.11	398	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP044086.1	1631847	1633079
GCA_008693965.1	GCA_008693965.1_03494	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	135	98.52	69.17	133	WP_003082280.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP044086.1	3578435	3578842
GCA_008693965.1	GCA_008693965.1_04905	blaLUT	LUT family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	296	296	100.00	99.32	296	WP_010798607.1	extended-spectrum class A beta-lactamase LUT-1	NF000324.2	LUT family class A beta-lactamase	CP044085.1	826009	826899
GCA_008693965.1	GCA_008693965.1_05204	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	268	277	94.58	55.34	262	WP_337883258.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP044084.1	209617	210423
GCA_008693965.1	GCA_008693965.1_05209	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP044084.1	215425	215661
GCA_008693965.1	GCA_008693965.1_05210	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	98.35	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP044084.1	215658	216023
GCA_008693965.1	GCA_008693965.1_05211	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	548	561	100.00	85.38	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP044084.1	216040	217686
GCA_008693965.1	GCA_008693965.1_05212	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	81	81	100.00	100.00	81	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	CP044084.1	217683	217928
GCA_008693965.1	GCA_008693965.1_05213	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	98.90	93.33	90	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP044084.1	217931	218206
GCA_008693965.1	GCA_008693965.1_05214	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	AAA98222.1	mercuric transport protein MerT	NA	NA	CP044084.1	218222	218572
GCA_008693965.1	GCA_008693965.1_05215	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	94.44	144	AAC38229.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP044084.1	218644	219078
GCA_008693965.1	GCA_008693965.1_05217	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family B	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	183	186	91.94	64.33	171	AAN67541.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	NF040504.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	CP044084.1	219988	220539
GCA_008693965.1	GCA_008693965.1_05317	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	77.17	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP044084.1	308442	308720
GCA_008693965.1	GCA_008693965.1_05318	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	143	141	97.16	68.61	137	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP044084.1	308733	309164
GCA_008693965.1	GCA_008693965.1_05319	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	100.00	77.72	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP044084.1	309177	310859
GCA_008693965.1	GCA_008693965.1_05322	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	98.72	50.65	77	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP044084.1	311651	311887
GCA_008693965.1	GCA_008693965.1_05554	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	77.17	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP044084.1	525854	526132
GCA_008693965.1	GCA_008693965.1_05555	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	143	141	97.16	68.61	137	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP044084.1	526145	526576
GCA_008693965.1	GCA_008693965.1_05556	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	100.00	77.72	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP044084.1	526589	528271
GCA_008693965.1	GCA_008693965.1_05559	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	98.72	50.65	77	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP044084.1	529063	529299
GCA_008693965.1	GCA_008693965.1_05566	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family B	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	184	186	92.47	63.95	172	AAN67541.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	NF040504.1	arsinothricin resistance N-acetyltransferase ArsN1 family B	CP044084.1	536312	536866
GCA_008693965.1	GCA_008693965.1_05661	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	98.72	50.65	77	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP044087.1	17091	17327
GCA_008693965.1	GCA_008693965.1_05664	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	100.00	77.72	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP044087.1	18119	19801
GCA_008693965.1	GCA_008693965.1_05665	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	143	141	97.16	68.61	137	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP044087.1	19814	20245
GCA_008693965.1	GCA_008693965.1_05666	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	77.17	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP044087.1	20258	20536
GCA_008693965.1	GCA_008693965.1_05764	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	98.72	50.65	77	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP044087.1	92804	93040
GCA_008693965.1	GCA_008693965.1_05767	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	100.00	77.72	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP044087.1	93832	95514
GCA_008693965.1	GCA_008693965.1_05768	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	143	141	97.16	68.61	137	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP044087.1	95527	95958
GCA_008693965.1	GCA_008693965.1_05769	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	77.17	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP044087.1	95971	96249
GCA_000568515.1	GCA_000568515.1_02002	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	277	272	99.26	59.35	278	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	AVBM01000008.1	89830	90663
GCA_000568515.1	GCA_000568515.1_02826	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	754	631	85.90	42.47	551	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AVBM01000014.1	28170	30434
GCA_009717105.1	GCA_009717105.1_00357	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMXY01000001.1	271435	271863
GCA_009717105.1	GCA_009717105.1_00362	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMXY01000001.1	273730	275193
GCA_009717105.1	GCA_009717105.1_00363	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMXY01000001.1	275313	276530
GCA_029928745.1	GCA_029928745.1_00053	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREFI010000011.1	4007	4387
GCA_029928745.1	GCA_029928745.1_00054	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREFI010000011.1	4377	6134
GCA_029928745.1	GCA_029928745.1_00055	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREFI010000011.1	6241	7086
GCA_029928745.1	GCA_029928745.1_00064	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	99.07	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JAREFI010000013.1	572	1222
GCA_029928745.1	GCA_029928745.1_00065	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAREFI010000013.1	1304	2947
GCA_029928745.1	GCA_029928745.1_00066	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	JAREFI010000013.1	3005	3343
GCA_029928745.1	GCA_029928745.1_01477	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREFI010000002.1	605851	606924
GCA_029928745.1	GCA_029928745.1_02111	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFI010000005.1	62046	63335
GCA_029928745.1	GCA_029928745.1_02291	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFI010000006.1	108303	109595
GCA_029928745.1	GCA_029928745.1_02295	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREFI010000006.1	113278	113625
GCA_029928745.1	GCA_029928745.1_02318	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	69.06	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAREFI010000007.1	8828	9265
GCA_001646625.1	GCA_001646625.1_00100	blaSHV-1	broad-spectrum class A beta-lactamase SHV-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_001620095.1	broad-spectrum class A beta-lactamase SHV-1	NF000285.3	SHV family class A beta-lactamase	CP015753.1	102915	103775
GCA_001646625.1	GCA_001646625.1_00474	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	116	102	100.00	56.91	123	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP015753.1	487800	488150
GCA_001646625.1	GCA_001646625.1_00865	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	97.87	141	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP015753.1	901990	902415
GCA_001646625.1	GCA_001646625.1_00866	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.07	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP015753.1	902428	903717
GCA_001646625.1	GCA_001646625.1_00867	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	96.91	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP015753.1	903765	905516
GCA_001646625.1	GCA_001646625.1_00868	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	93.33	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP015753.1	905534	905896
GCA_001646625.1	GCA_001646625.1_00869	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	116	116	100.00	93.97	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP015753.1	905944	906294
GCA_001646625.1	GCA_001646625.1_01442	oqxA	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	EXACTP	391	391	100.00	100.00	391	WP_002914189.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NF000272.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	CP015753.1	1543870	1545045
GCA_001646625.1	GCA_001646625.1_01443	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	100.00	99.90	1050	WP_021312368.1	multidrug efflux RND transporter permease subunit OqxB20	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP015753.1	1545069	1548221
GCA_001646625.1	GCA_001646625.1_01781	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	140	141	98.58	77.70	139	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP015753.1	1903417	1903839
GCA_001646625.1	GCA_001646625.1_02532	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.49	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP015753.1	2681234	2682418
GCA_001646625.1	GCA_001646625.1_02672	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP015753.1	2831732	2832634
GCA_001646625.1	GCA_001646625.1_03244	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_004146118.1	FosA5 family fosfomycin resistance glutathione transferase	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP015753.1	3450239	3450658
GCA_001646625.1	GCA_001646625.1_04218	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	410	410	100.00	100.00	410	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP015753.1	4496989	4498221
GCA_001646625.1	GCA_001646625.1_04929	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.67	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP015754.1	34350	36152
GCA_001646625.1	GCA_001646625.1_04930	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	570	600	95.00	99.30	570	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP015754.1	36139	37851
GCA_001646625.1	GCA_001646625.1_05056	dfrA50	trimethoprim-resistant dihydrofolate reductase DfrA50	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	158	158	100.00	98.73	158	WP_040203768.1	trimethoprim-resistant dihydrofolate reductase DfrA50	NF047323.1	trimethoprim-resistant dihydrofolate reductase DfrA50	CP015755.1	8052	8528
GCA_023973105.1	GCA_023973105.1_02165	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	98.74	79.08	392	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP099548.1	2237078	2238271
GCA_023973105.1	GCA_023973105.1_03210	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	407	392	100.00	75.51	392	WP_430673475.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP099548.1	3281009	3282232
GCA_000463395.1	GCA_000463395.1_01336	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP003800.1	1275322	1277241
GCA_018128325.1	GCA_018128325.1_01033	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	381	70.60	45.35	269	WP_009950391.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP072384.1	1115395	1116243
GCA_011714925.1	GCA_011714925.1_00617	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RXXU01000001.1	103496	104713
GCA_011714925.1	GCA_011714925.1_00618	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RXXU01000001.1	104734	106197
GCA_011714925.1	GCA_011714925.1_00655	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RXXU01000001.1	137063	138982
GCA_011714925.1	GCA_011714925.1_01451	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXU01000043.1	10933	12354
GCA_900068995.1	GCA_900068995.1_00762	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CZWH01000024.1	55443	56732
GCA_900068995.1	GCA_900068995.1_01113	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CZWH01000005.1	30454	31743
GCA_900068995.1	GCA_900068995.1_01114	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CZWH01000005.1	31761	32162
GCA_900068995.1	GCA_900068995.1_01165	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CZWH01000003.1	19681	20754
GCA_900068995.1	GCA_900068995.1_01728	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CZWH01000011.1	402	1841
GCA_900068995.1	GCA_900068995.1_02239	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CZWH01000021.1	167550	169556
GCA_023522295.1	GCA_023522295.1_01011	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	QFFX01000027.1	132	932
GCA_023522295.1	GCA_023522295.1_01144	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	648	641	99.53	97.81	638	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	QFFX01000002.1	30511	32457
GCA_023522295.1	GCA_023522295.1_02051	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	QFFX01000005.1	77593	78558
GCA_000219475.3	GCA_000219475.3_00029	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP024781.1	29047	30966
GCA_000219475.3	GCA_000219475.3_00196	erm(T)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	98.36	244	WP_002345002.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP024781.1	183386	184120
GCA_000219475.3	GCA_000219475.3_01602	spw	ANT(9) family aminoglycoside nucleotidyltransferase Spw	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	269	269	100.00	100.00	269	WP_002294509.1	ANT(9) family aminoglycoside nucleotidyltransferase Spw	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP024781.1	1553414	1554223
GCA_000931485.1	GCA_000931485.1_00170	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JXXP01000014.1	64681	65754
GCA_000931485.1	GCA_000931485.1_01290	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JXXP01000025.1	4050	4397
GCA_000931485.1	GCA_000931485.1_01294	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JXXP01000025.1	8080	9372
GCA_000931485.1	GCA_000931485.1_01310	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JXXP01000027.1	291	1136
GCA_000931485.1	GCA_000931485.1_01311	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JXXP01000027.1	1243	3000
GCA_000931485.1	GCA_000931485.1_01312	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JXXP01000027.1	2990	3370
GCA_000931485.1	GCA_000931485.1_01425	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JXXP01000032.1	1789	3255
GCA_000931485.1	GCA_000931485.1_01806	qnrD1	quinolone resistance pentapeptide repeat protein QnrD1	core	AMR	AMR	QUINOLONE	QUINOLONE	ALLELEP	214	214	100.00	100.00	214	WP_012634451.1	quinolone resistance pentapeptide repeat protein QnrD1	NF000139.2	QnrD family quinolone resistance pentapeptide repeat protein	JXXP01000043.1	758	1402
GCA_000931485.1	GCA_000931485.1_01814	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JXXP01000049.1	122	607
GCA_000931485.1	GCA_000931485.1_02040	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JXXP01000052.1	62027	63316
GCA_000931485.1	GCA_000931485.1_02121	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JXXP01000056.1	500	1243
GCA_000931485.1	GCA_000931485.1_02621	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JXXP01000008.1	2950	4956
GCA_000931485.1	GCA_000931485.1_02667	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JXXP01000008.1	57003	57395
GCA_000931485.1	GCA_000931485.1_02668	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JXXP01000008.1	57413	58705
GCA_030229185.1	GCA_030229185.1_00132	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPGK010000013.1	693	1544
GCA_030229185.1	GCA_030229185.1_00141	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPGK010000013.1	9426	10280
GCA_030229185.1	GCA_030229185.1_01119	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPGK010000003.1	575	1750
GCA_001553565.1	GCA_001553565.1_00499	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	43.97	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP014228.1	579290	580714
GCA_001553565.1	GCA_001553565.1_01036	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.82	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP014228.1	1216111	1216533
GCA_001063695.1	GCA_001063695.1_00577	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JVCF01000009.1	119274	120347
GCA_001063695.1	GCA_001063695.1_00599	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JVCF01000010.1	1833	3839
GCA_001063695.1	GCA_001063695.1_00600	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JVCF01000010.1	3939	5696
GCA_001063695.1	GCA_001063695.1_00601	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JVCF01000010.1	5696	6067
GCA_001063695.1	GCA_001063695.1_00610	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JVCF01000010.1	12804	13535
GCA_001063695.1	GCA_001063695.1_00611	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JVCF01000010.1	13661	14443
GCA_001063695.1	GCA_001063695.1_00654	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JVCF01000014.1	3822	4226
GCA_001063695.1	GCA_001063695.1_00655	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JVCF01000014.1	4443	5186
GCA_001063695.1	GCA_001063695.1_00854	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JVCF01000020.1	33558	34340
GCA_001063695.1	GCA_001063695.1_00855	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JVCF01000020.1	34466	35197
GCA_001063695.1	GCA_001063695.1_01277	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JVCF01000026.1	12569	13858
GCA_001063695.1	GCA_001063695.1_01339	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JVCF01000028.1	1724	3163
GCA_001063695.1	GCA_001063695.1_01447	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JVCF01000029.1	133161	133943
GCA_001063695.1	GCA_001063695.1_01448	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JVCF01000029.1	134069	134800
GCA_001063695.1	GCA_001063695.1_01812	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JVCF01000031.1	293088	293819
GCA_001063695.1	GCA_001063695.1_01813	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JVCF01000031.1	293945	294727
GCA_001063695.1	GCA_001063695.1_01829	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JVCF01000032.1	11161	11541
GCA_001063695.1	GCA_001063695.1_01830	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JVCF01000032.1	11531	13288
GCA_001063695.1	GCA_001063695.1_01831	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JVCF01000032.1	13395	14240
GCA_000590475.1	GCA_000590475.1_02317	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	409	414	94.44	73.98	392	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP007441.1	2434148	2435377
GCA_000590475.1	GCA_000590475.1_04332	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	387	396	93.94	55.11	372	WP_280147732.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP007441.1	4643636	4644799
GCA_900033555.1	GCA_900033555.1_00968	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	FDPE01000003.1	198912	200201
GCA_900033555.1	GCA_900033555.1_00972	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	FDPE01000003.1	203887	204234
GCA_900033555.1	GCA_900033555.1_01076	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.96	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FDPE01000003.1	307732	309375
GCA_900033555.1	GCA_900033555.1_02208	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	96.72	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	FDPE01000013.1	2556	2924
GCA_900033555.1	GCA_900033555.1_02211	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	FDPE01000013.1	4777	5157
GCA_900033555.1	GCA_900033555.1_02212	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	FDPE01000013.1	5147	6904
GCA_900033555.1	GCA_900033555.1_02213	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	289	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	FDPE01000013.1	7011	7880
GCA_900033555.1	GCA_900033555.1_02217	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	FDPE01000013.1	9781	10104
GCA_900033555.1	GCA_900033555.1_02224	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	FDPE01000013.1	16633	17274
GCA_025151925.1	GCA_025151925.1_03217	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXVT010000099.1	5837	7237
GCA_016127715.1	GCA_016127715.1_00843	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	356	350	100.00	74.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP066042.1	674288	675358
GCA_023110445.1	GCA_023110445.1_00437	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.74	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JALDVZ010000001.1	413865	415064
GCA_023110445.1	GCA_023110445.1_00597	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDVZ010000001.1	587702	589165
GCA_023110445.1	GCA_023110445.1_00598	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDVZ010000001.1	589285	590502
GCA_023110445.1	GCA_023110445.1_01203	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALDVZ010000002.1	411716	413635
GCA_900476505.1	GCA_900476505.1_00991	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	LS483451.1	947933	949132
GCA_900476505.1	GCA_900476505.1_01079	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	LS483451.1	1020561	1020989
GCA_003492765.1	GCA_003492765.1_01290	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQLS01000006.1	131838	132743
GCA_003492765.1	GCA_003492765.1_01833	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	95.67	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQLS01000012.1	45795	47321
GCA_003492765.1	GCA_003492765.1_02000	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	99.05	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQLS01000016.1	20838	21470
GCA_003492765.1	GCA_003492765.1_02001	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.84	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQLS01000016.1	21717	22955
GCA_000960005.1	GCA_000960005.1_00696	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.49	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JYGP01000002.1	407987	409186
GCA_019047825.1	GCA_019047825.1_00438	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP077259.1	476515	478173
GCA_019047825.1	GCA_019047825.1_01560	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP077259.1	1564798	1565997
GCA_002988215.2	GCA_002988215.2_01339	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP116489.1	1336289	1337683
GCA_019334565.1	GCA_019334565.1_01002	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP079724.1	999184	999612
GCA_900155925.1	GCA_900155925.1_01729	helR	RNA polymerase recycling motor ATPase HelR	plus	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	791	722	97.51	63.94	757	CCA59315.1	RNA polymerase recycling motor ATPase HelR	NF041254.1	RNA polymerase recycling motor ATPase HelR	FTMI01000003.1	83946	86321
GCA_900155925.1	GCA_900155925.1_03063	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	394	391	99.74	63.45	394	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	FTMI01000005.1	305373	306557
GCA_900155925.1	GCA_900155925.1_03227	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	136	150	84.00	50.39	129	WP_063857695.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	FTMI01000007.1	117415	117825
GCA_001679175.1	GCA_001679175.1_00744	icr-Mo	phosphoethanolamine--lipid A transferase ICR-Mo	plus	AMR	AMR	COLISTIN	COLISTIN	BLASTP	548	558	98.21	100.00	548	WP_082741435.1	phosphoethanolamine--lipid A transferase ICR-Mo	NA	NA	LZDO01000014.1	66757	68403
GCA_001611425.1	GCA_001611425.1_00079	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP012970.1	93255	94613
GCA_001611425.1	GCA_001611425.1_00280	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.56	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP012970.1	324395	325750
GCA_001611425.1	GCA_001611425.1_01750	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP012970.1	1821915	1823207
GCA_001611425.1	GCA_001611425.1_01796	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	99.58	238	ABD30999.1	serine protease SplE	NA	NA	CP012970.1	1860646	1861362
GCA_001611425.1	GCA_001611425.1_01799	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA	CP012970.1	1863137	1863859
GCA_001611425.1	GCA_001611425.1_01800	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	230	235	97.87	95.22	230	ABD31004.1	serine protease SplA	NA	NA	CP012970.1	1863984	1864676
GCA_001611425.1	GCA_001611425.1_01805	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP012970.1	1868809	1869792
GCA_001611425.1	GCA_001611425.1_01806	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP012970.1	1869794	1870714
GCA_001611425.1	GCA_001611425.1_01963	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP012970.1	1997562	1997912
GCA_001611425.1	GCA_001611425.1_01980	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP012970.1	2014997	2015131
GCA_001611425.1	GCA_001611425.1_02127	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.38	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP012970.1	2167566	2169008
GCA_001611425.1	GCA_001611425.1_02294	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	98.56	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP012970.1	2314170	2314589
GCA_001611425.1	GCA_001611425.1_02379	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP012970.1	2402725	2403690
GCA_001611425.1	GCA_001611425.1_02380	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP012970.1	2404257	2405204
GCA_001611425.1	GCA_001611425.1_02381	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP012970.1	2405206	2406183
GCA_001611425.1	GCA_001611425.1_02600	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP012970.1	2640705	2642234
GCA_001611425.1	GCA_001611425.1_02635	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP012970.1	2683768	2684820
GCA_001611425.1	GCA_001611425.1_02689	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	99.51	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP012971.1	5485	6102
GCA_001611425.1	GCA_001611425.1_02697	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP012971.1	11019	11399
GCA_001611425.1	GCA_001611425.1_02699	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	459	585	78.46	94.77	459	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	CP012971.1	11767	13146
GCA_001611425.1	GCA_001611425.1_02700	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733289.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP012971.1	13253	14098
GCA_013333895.2	GCA_013333895.2_02067	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	381	70.60	45.35	269	WP_009950391.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JABCNY020000144.1	1336	2184
GCA_900445095.1	GCA_900445095.1_00795	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	UFSK01000001.1	735768	737882
GCA_900445095.1	GCA_900445095.1_01093	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	75.72	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UFSK01000001.1	1042247	1043887
GCA_900445095.1	GCA_900445095.1_01095	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	HMM	73	81	79.01	59.38	64	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	UFSK01000001.1	1044550	1044771
GCA_030027035.1	GCA_030027035.1_00881	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASENE010000002.1	1462	3102
GCA_030027035.1	GCA_030027035.1_01282	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	454	458	97.82	99.55	448	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	JASENE010000003.1	59686	61050
GCA_030027035.1	GCA_030027035.1_01283	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_024052575.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JASENE010000003.1	61508	63427
GCA_030027035.1	GCA_030027035.1_01399	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	98.36	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JASENE010000003.1	174696	176159
GCA_030027035.1	GCA_030027035.1_01400	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.26	405	WP_018374806.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JASENE010000003.1	176279	177496
GCA_030027035.1	GCA_030027035.1_01533	dfrF	trimethoprim-resistant dihydrofolate reductase DfrF	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	164	164	100.00	100.00	164	WP_002322211.1	trimethoprim-resistant dihydrofolate reductase DfrF	NF000333.1	trimethoprim-resistant dihydrofolate reductase DfrF	JASENE010000004.1	87974	88468
GCA_016127955.1	GCA_016127955.1_02592	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.10	46.40	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP066060.1	3064133	3065557
GCA_002149965.1	GCA_002149965.1_01756	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	321	299	100.00	55.99	309	WP_038576754.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	MSQB01000002.1	9181	10146
GCA_002149965.1	GCA_002149965.1_05180	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	143	144	94.44	52.55	137	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	MSQB01000009.1	120790	121221
GCA_938040075.1	GCA_938040075.1_01214	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CALHXA010000082.1	8717	9934
GCA_938040075.1	GCA_938040075.1_01215	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CALHXA010000082.1	10054	11517
GCA_024329925.1	GCA_024329925.1_01928	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	99.18	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	JANDXG010000040.1	12772	13506
GCA_024329925.1	GCA_024329925.1_02602	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANDXG010000066.1	199	1164
GCA_014931495.1	GCA_014931495.1_00771	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.77	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP063127.1	757174	758568
GCA_024089355.1	GCA_024089355.1_00997	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP089949.1	936785	937984
GCA_030440045.1	GCA_030440045.1_00075	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAQFJL010000011.1	6706	8625
GCA_030440045.1	GCA_030440045.1_00107	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQFJL010000011.1	36906	38630
GCA_030440045.1	GCA_030440045.1_00108	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.88	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQFJL010000011.1	38632	40368
GCA_030440045.1	GCA_030440045.1_00574	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038792.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQFJL010000001.1	17288	18025
GCA_030440045.1	GCA_030440045.1_00576	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAQFJL010000001.1	18746	19654
GCA_030440045.1	GCA_030440045.1_00577	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAQFJL010000001.1	19651	20193
GCA_030440045.1	GCA_030440045.1_00578	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAQFJL010000001.1	20286	21080
GCA_030440045.1	GCA_030440045.1_00584	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAQFJL010000001.1	23057	24496
GCA_030440045.1	GCA_030440045.1_00856	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQFJL010000001.1	289354	290817
GCA_030440045.1	GCA_030440045.1_00857	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQFJL010000001.1	290937	292154
GCA_029928985.1	GCA_029928985.1_01607	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JARECZ010000003.1	19879	20952
GCA_029928985.1	GCA_029928985.1_01719	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JARECZ010000003.1	162840	164129
GCA_029928985.1	GCA_029928985.1_01720	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JARECZ010000003.1	164147	164548
GCA_029928985.1	GCA_029928985.1_02328	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JARECZ010000006.1	60515	61804
GCA_029928985.1	GCA_029928985.1_02457	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JARECZ010000009.1	28505	29350
GCA_029928985.1	GCA_029928985.1_02458	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JARECZ010000009.1	29519	31276
GCA_029928985.1	GCA_029928985.1_02459	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JARECZ010000009.1	31266	31646
GCA_012926745.1	GCA_012926745.1_00532	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JABBMM010000003.1	60415	61704
GCA_012926745.1	GCA_012926745.1_00667	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JABBMM010000004.1	73176	73817
GCA_012926745.1	GCA_012926745.1_00853	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JABBMM010000008.1	22145	22525
GCA_012926745.1	GCA_012926745.1_00854	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JABBMM010000008.1	22515	24272
GCA_012926745.1	GCA_012926745.1_00855	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JABBMM010000008.1	24379	25224
GCA_012926745.1	GCA_012926745.1_00945	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JABBMM010000012.1	759	1181
GCA_012926745.1	GCA_012926745.1_00986	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JABBMM010000012.1	54584	55657
GCA_012926745.1	GCA_012926745.1_01325	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JABBMM010000013.1	14320	15864
GCA_012926745.1	GCA_012926745.1_01326	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JABBMM010000013.1	16048	16608
GCA_012926745.1	GCA_012926745.1_01354	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JABBMM010000015.1	5387	5758
GCA_012926745.1	GCA_012926745.1_01355	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JABBMM010000015.1	5758	7515
GCA_012926745.1	GCA_012926745.1_01356	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JABBMM010000015.1	7615	9621
GCA_012926745.1	GCA_012926745.1_01361	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	228	243	100.00	93.83	243	WP_001072201.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JABBMM010000016.1	1402	2088
GCA_012926745.1	GCA_012926745.1_01362	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JABBMM010000016.1	2214	2996
GCA_012926745.1	GCA_012926745.1_01369	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JABBMM010000017.1	3053	3457
GCA_012926745.1	GCA_012926745.1_01370	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JABBMM010000017.1	3674	4417
GCA_012926745.1	GCA_012926745.1_01382	cfr	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	core	AMR	AMR	LINCOSAMIDE/OXAZOLIDINONE/PHENICOL/PLEUROMUTILIN/STREPTOGRAMIN	CHLORAMPHENICOL/CLINDAMYCIN/FLORFENICOL/LINEZOLID/STREPTOGRAMIN B/TIAMULIN/VIRGINIAMYCIN	BLASTP	349	349	100.00	99.71	349	WP_001010505.1	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	JABBMM010000021.1	367	1416
GCA_012926745.1	GCA_012926745.1_01715	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JABBMM010000025.1	1133	1618
GCA_012926745.1	GCA_012926745.1_01716	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JABBMM010000026.1	48	1487
GCA_003202355.1	GCA_003202355.1_01588	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	NRIP01000023.1	9998	11539
GCA_003202355.1	GCA_003202355.1_01817	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	276	279	98.92	99.64	276	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	NRIP01000037.1	6107	6937
GCA_003202355.1	GCA_003202355.1_01826	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NRIP01000024.1	4836	6278
GCA_003202355.1	GCA_003202355.1_01841	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	555	639	86.85	99.82	555	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NA	NA	NRIP01000041.1	156	1823
GCA_003202355.1	GCA_003202355.1_01847	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	NRIP01000042.1	249	1085
GCA_003202355.1	GCA_003202355.1_01848	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	398	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NRIP01000042.1	1085	2281
GCA_003202355.1	GCA_003202355.1_02082	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NRIP01000045.1	209	1024
GCA_003202355.1	GCA_003202355.1_02414	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	NRIP01000002.1	69	923
GCA_003202355.1	GCA_003202355.1_02545	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	NRIP01000029.1	57	1232
GCA_019349055.1	GCA_019349055.1_00016	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JAASKZ010000001.1	8483	9217
GCA_019349055.1	GCA_019349055.1_00087	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	195	244	76.23	96.77	186	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAASKZ010000002.1	15672	16259
GCA_019349055.1	GCA_019349055.1_00113	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	195	244	76.23	96.77	186	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAASKZ010000002.1	36590	37177
GCA_019349055.1	GCA_019349055.1_00126	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JAASKZ010000003.1	6671	7405
GCA_019349055.1	GCA_019349055.1_00154	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	195	244	76.23	96.77	186	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAASKZ010000003.1	27566	28153
GCA_019349055.1	GCA_019349055.1_01487	aac(6)-Ie	AAC(6)-Ie family aminoglycoside N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	HMM	173	479	35.49	99.41	170	WP_032490744.1	AAC(6)-Ie family aminoglycoside N-acetyltransferase	NF033693.0	AAC(6)-Ie family aminoglycoside N-acetyltransferase	JAASKZ010000005.1	1137315	1137836
GCA_019349055.1	GCA_019349055.1_01973	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JAASKZ010000005.1	1570816	1571457
GCA_019349055.1	GCA_019349055.1_02205	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	445	479	91.86	98.64	440	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAASKZ010000005.1	1782490	1783827
GCA_019349055.1	GCA_019349055.1_02210	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAASKZ010000005.1	1787384	1788850
GCA_019349055.1	GCA_019349055.1_02211	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAASKZ010000005.1	1788948	1789847
GCA_019349055.1	GCA_019349055.1_02448	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAASKZ010000005.1	2021619	2022413
GCA_019349055.1	GCA_019349055.1_02449	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAASKZ010000005.1	2022506	2023048
GCA_019349055.1	GCA_019349055.1_02450	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	199	302	65.89	99.50	199	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	NA	JAASKZ010000005.1	2023045	2023644
GCA_019349055.1	GCA_019349055.1_02455	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	JAASKZ010000005.1	2026674	2026997
GCA_019349055.1	GCA_019349055.1_02462	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAASKZ010000005.1	2033555	2033935
GCA_019349055.1	GCA_019349055.1_02463	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAASKZ010000005.1	2033925	2035682
GCA_019349055.1	GCA_019349055.1_02464	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAASKZ010000005.1	2035789	2036634
GCA_019349055.1	GCA_019349055.1_02579	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAASKZ010000005.1	2143242	2144531
GCA_019349055.1	GCA_019349055.1_02582	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAASKZ010000005.1	2145828	2147834
GCA_019349055.1	GCA_019349055.1_02601	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAASKZ010000005.1	2163506	2163907
GCA_019349055.1	GCA_019349055.1_02602	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAASKZ010000005.1	2163925	2165217
GCA_019349055.1	GCA_019349055.1_02688	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	420	429	96.97	79.09	416	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAASKZ010000005.1	2240255	2241517
GCA_000463895.2	GCA_000463895.2_00219	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	142	150	94.00	49.65	141	WP_033959319.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	AUNW02000028.1	8571	8999
GCA_022690485.1	GCA_022690485.1_01693	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	99.07	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JALCVG010000041.1	716	1039
GCA_022690485.1	GCA_022690485.1_02190	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	BLASTP	299	299	100.00	99.67	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JALCVG010000007.1	29933	30832
GCA_022690485.1	GCA_022690485.1_02191	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCVG010000007.1	30931	32397
GCA_001808865.1	GCA_001808865.1_00783	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV795009.1	13075	14994
GCA_001808865.1	GCA_001808865.1_00798	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KV795009.1	28396	29874
GCA_001808865.1	GCA_001808865.1_01362	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV795019.1	121934	123397
GCA_001808865.1	GCA_001808865.1_01363	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV795019.1	123517	124734
GCA_016728705.1	GCA_016728705.1_02198	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP068166.1	2296305	2297729
GCA_022486365.1	GCA_022486365.1_00003	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKVGJ010000010.1	3210	4055
GCA_022486365.1	GCA_022486365.1_00004	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKVGJ010000010.1	4162	5919
GCA_022486365.1	GCA_022486365.1_00005	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKVGJ010000010.1	5909	6289
GCA_022486365.1	GCA_022486365.1_00008	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKVGJ010000010.1	8094	9560
GCA_022486365.1	GCA_022486365.1_00020	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKVGJ010000011.1	2600	4606
GCA_022486365.1	GCA_022486365.1_00023	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAKVGJ010000013.1	79	564
GCA_022486365.1	GCA_022486365.1_00340	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	139	99.28	75.36	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKVGJ010000001.1	303931	304347
GCA_022486365.1	GCA_022486365.1_01102	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAKVGJ010000001.1	1016913	1017227
GCA_022486365.1	GCA_022486365.1_01103	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.90	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVGJ010000001.1	1017227	1018516
GCA_022486365.1	GCA_022486365.1_01104	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVGJ010000001.1	1018534	1018929
GCA_022486365.1	GCA_022486365.1_01884	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.19	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVGJ010000003.1	132186	133478
GCA_022486365.1	GCA_022486365.1_01963	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVGJ010000003.1	206054	207346
GCA_022486365.1	GCA_022486365.1_01964	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVGJ010000003.1	207364	207756
GCA_022486365.1	GCA_022486365.1_01983	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVGJ010000003.1	225015	226304
GCA_022486365.1	GCA_022486365.1_01984	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVGJ010000003.1	226322	226723
GCA_022835475.1	GCA_022835475.1_02618	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	249	93.57	46.61	236	WP_197749418.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	BQOJ01000001.1	3065920	3066696
GCA_022922955.1	GCA_022922955.1_01064	copP	copper-binding metallochaperone CopP	plus	STRESS	METAL	COPPER	COPPER	BLASTP	66	66	100.00	93.94	66	AAD05936.1	copper-binding metallochaperone CopP	NF033781.1	copper-binding metallochaperone CopP	CP094101.1	1087716	1087916
GCA_020561985.1	GCA_020561985.1_00376	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAJCOL010000001.1	376154	377617
GCA_020561985.1	GCA_020561985.1_00377	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAJCOL010000001.1	377737	378954
GCA_030229785.1	GCA_030229785.1_02020	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPGR010000006.1	184477	185331
GCA_028335645.1	GCA_028335645.1_00672	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	501	500	99.40	80.68	497	WP_002296175.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP116579.1	745666	747171
GCA_028335645.1	GCA_028335645.1_01971	copB	copper/silver-translocating P-type ATPase CopB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	786	745	95.57	83.08	733	AFM70730.1	copper/silver-translocating P-type ATPase CopB	NA	NA	CP116579.1	2066021	2068381
GCA_028335645.1	GCA_028335645.1_02373	aac(6)-I	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	183	183	100.00	99.45	183	WP_005880220.1	aminoglycoside N-acetyltransferase AAC(6)-Iih	NF000165.3	aminoglycoside 6-N-acetyltransferase	CP116579.1	2498609	2499160
GCA_028335645.1	GCA_028335645.1_02878	poxtA	ABC-F type ribosomal protection protein PoxtA	core	AMR	AMR	OXAZOLIDINONE/PHENICOL	CHLORAMPHENICOL/FLORFENICOL/LINEZOLID	EXACTP	542	542	100.00	100.00	542	WP_002415638.1	ABC-F type ribosomal protection protein PoxtA	NA	NA	CP116580.1	3018	4646
GCA_028335645.1	GCA_028335645.1_02895	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_001574275.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP116580.1	18319	20238
GCA_028335645.1	GCA_028335645.1_02896	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	458	458	100.00	98.69	458	WP_002294500.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP116580.1	20432	21808
GCA_028335645.1	GCA_028335645.1_02902	fexB	chloramphenicol/florfenicol efflux MFS transporter FexB	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	PARTIALP	354	469	75.48	100.00	354	WP_002415211.1	chloramphenicol/florfenicol efflux MFS transporter FexB	NA	NA	CP116580.1	26733	27797
GCA_014266935.1	GCA_014266935.1_00115	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMUO010000013.1	2710	3270
GCA_014266935.1	GCA_014266935.1_00116	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMUO010000013.1	3454	4998
GCA_014266935.1	GCA_014266935.1_00189	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMUO010000016.1	7103	7450
GCA_014266935.1	GCA_014266935.1_00193	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMUO010000016.1	11133	12425
GCA_014266935.1	GCA_014266935.1_00211	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMUO010000018.1	2397	4403
GCA_014266935.1	GCA_014266935.1_00212	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMUO010000018.1	4503	6260
GCA_014266935.1	GCA_014266935.1_00213	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMUO010000018.1	6260	6631
GCA_014266935.1	GCA_014266935.1_00217	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMUO010000019.1	238	981
GCA_014266935.1	GCA_014266935.1_00218	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMUO010000019.1	1198	1602
GCA_014266935.1	GCA_014266935.1_00223	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMUO010000021.1	421	1155
GCA_014266935.1	GCA_014266935.1_00914	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMUO010000005.1	53166	54806
GCA_014266935.1	GCA_014266935.1_01004	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMUO010000006.1	42420	43712
GCA_014266935.1	GCA_014266935.1_01055	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMUO010000007.1	10298	10678
GCA_014266935.1	GCA_014266935.1_01056	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMUO010000007.1	10668	12425
GCA_014266935.1	GCA_014266935.1_01057	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMUO010000007.1	12532	13377
GCA_000477675.1	GCA_000477675.1_00804	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	43.38	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KI515688.1	845310	845720
GCA_900120125.1	GCA_900120125.1_00447	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.24	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	LT635544.1	467129	468607
GCA_001546875.1	GCA_001546875.1_00071	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KQ958215.1	24001	24411
GCA_019929985.1	GCA_019929985.1_00768	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZQN010000002.1	159095	159523
GCA_962746765.1	GCA_962746765.1_00120	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIZG010000001.1	138452	139084
GCA_962746765.1	GCA_962746765.1_00121	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.36	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIZG010000001.1	139334	140572
GCA_962746765.1	GCA_962746765.1_00266	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.73	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIZG010000002.1	62764	64143
GCA_962746765.1	GCA_962746765.1_00577	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIZG010000004.1	40222	41748
GCA_962746765.1	GCA_962746765.1_01601	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIZG010000016.1	26811	27716
GCA_023278185.1	GCA_023278185.1_02328	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	305	97.38	54.21	297	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP066356.1	2413151	2414050
GCA_023278185.1	GCA_023278185.1_02385	blaBJP	BJP family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	295	294	99.66	85.32	293	WP_011088970.1	BJP family subclass B3 metallo-beta-lactamase	NF012140.0	BJP family subclass B3 metallo-beta-lactamase	CP066356.1	2481597	2482484
GCA_023278185.1	GCA_023278185.1_04106	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	272	99.26	69.26	270	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP066356.1	4205788	4206597
GCA_023109885.1	GCA_023109885.1_00685	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDUZ010000001.1	680230	681693
GCA_023109885.1	GCA_023109885.1_00686	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDUZ010000001.1	681813	683030
GCA_000145315.2	GCA_000145315.2_00928	bla	subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	258	249	93.57	46.19	236	WP_197749418.1	subclass B1 metallo-beta-lactamase	NF033088.2	subclass B1 metallo-beta-lactamase	ADDR02000001.1	114322	115098
GCA_019930905.1	GCA_019930905.1_01197	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP082857.1	1102796	1104190
GCA_030232325.1	GCA_030232325.1_00436	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJM010000001.1	162209	163063
GCA_030232325.1	GCA_030232325.1_00440	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASPJM010000001.1	164785	166209
GCA_003862485.1	GCA_003862485.1_00624	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	123	100.00	44.12	136	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	RRCM01000001.1	631490	631912
GCA_003862485.1	GCA_003862485.1_02466	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RRCM01000003.1	96073	97992
GCA_014201615.1	GCA_014201615.1_00935	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	411	95.38	60.46	392	WP_011552636.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	JACHEU010000001.1	954604	955797
GCA_014201615.1	GCA_014201615.1_01570	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	273	277	93.50	57.53	259	WP_337883258.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	JACHEU010000001.1	1616800	1617621
GCA_014201615.1	GCA_014201615.1_02070	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	631	73.38	47.00	466	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACHEU010000001.1	2142995	2144416
GCA_946223055.1	GCA_946223055.1_01014	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAMIDF010000013.1	17177	18367
GCA_009717705.1	GCA_009717705.1_00048	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	WMZB01000011.1	6041	7960
GCA_009717705.1	GCA_009717705.1_00080	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMZB01000011.1	34994	36718
GCA_009717705.1	GCA_009717705.1_00081	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMZB01000011.1	36720	38456
GCA_009717705.1	GCA_009717705.1_00703	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMZB01000020.1	1930	3393
GCA_009717705.1	GCA_009717705.1_00704	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMZB01000020.1	3513	4730
GCA_009717705.1	GCA_009717705.1_01475	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	PARTIALP	286	492	58.13	99.30	286	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NA	NA	WMZB01000049.1	73	933
GCA_003040715.1	GCA_003040715.1_01020	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	PZDI01000016.1	41803	42648
GCA_003040715.1	GCA_003040715.1_01536	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	80.89	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PZDI01000034.1	7366	8655
GCA_003040715.1	GCA_003040715.1_02178	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645013.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	PZDI01000089.1	1350	1835
GCA_003040715.1	GCA_003040715.1_02195	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	97.12	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	PZDI01000097.1	18	332
GCA_003040715.1	GCA_003040715.1_02196	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PZDI01000097.1	332	1621
GCA_003040715.1	GCA_003040715.1_02197	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	PZDI01000097.1	1639	2040
GCA_003040715.1	GCA_003040715.1_02233	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	PZDI01000114.1	19	399
GCA_003040715.1	GCA_003040715.1_02234	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	320	585	54.70	100.00	320	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	PZDI01000114.1	389	1351
GCA_001055405.1	GCA_001055405.1_00802	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVBA01000058.1	287	1729
GCA_001055405.1	GCA_001055405.1_01059	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JVBA01000077.1	254	1108
GCA_001055405.1	GCA_001055405.1_01067	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JVBA01000083.1	3545	5326
GCA_900635715.1	GCA_900635715.1_00879	ymoA	expression modulating protein YmoA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	67	67	100.00	100.00	67	AAQ90017.1	expression modulating protein YmoA	NA	NA	LR134160.1	953293	953496
GCA_900635715.1	GCA_900635715.1_01582	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.67	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	LR134160.1	1719733	1721535
GCA_900635715.1	GCA_900635715.1_01583	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	600	600	100.00	100.00	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	LR134160.1	1721522	1723324
GCA_900635715.1	GCA_900635715.1_02183	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	100	102	97.06	50.00	112	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	LR134160.1	2335698	2336000
GCA_900635715.1	GCA_900635715.1_02308	yfeA	iron/manganese ABC transporter substrate-binding protein YfeA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	322	322	100.00	100.00	322	AAC46147.1	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	LR134160.1	2462728	2463696
GCA_900635715.1	GCA_900635715.1_02309	yfeB	iron/manganese ABC transporter ATP-binding protein YfeB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	296	296	100.00	100.00	296	AAC46148.1	iron/manganese ABC transporter ATP-binding protein YfeB	NA	NA	LR134160.1	2463693	2464583
GCA_900635715.1	GCA_900635715.1_02311	yfeD	iron/manganese ABC transporter permease subunit YfeD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	297	100.00	99.66	297	AAC46150.1	iron/manganese ABC transporter permease subunit YfeD	NA	NA	LR134160.1	2465464	2466357
GCA_900635715.1	GCA_900635715.1_02966	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	121	102	100.00	53.28	122	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	LR134160.1	3176559	3176924
GCA_000212375.1	GCA_000212375.1_01443	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP002689.1	1774059	1774385
GCA_027662445.1	GCA_027662445.1_01338	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQDJS010000024.1	222	1076
GCA_027662445.1	GCA_027662445.1_01706	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQDJS010000004.1	194571	194972
GCA_027662445.1	GCA_027662445.1_01913	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQDJS010000006.1	10610	11020
GCA_007814385.1	GCA_007814385.1_00112	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	145	140	99.29	69.06	139	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP031271.1	129814	130251
GCA_007814385.1	GCA_007814385.1_00180	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP031271.1	220403	221476
GCA_007814385.1	GCA_007814385.1_00941	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	69.57	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP031271.1	974377	974796
GCA_007814385.1	GCA_007814385.1_00958	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP031271.1	993606	994895
GCA_007814385.1	GCA_007814385.1_02696	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP031272.1	15629	16009
GCA_007814385.1	GCA_007814385.1_02697	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP031272.1	15999	17756
GCA_007814385.1	GCA_007814385.1_02698	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP031272.1	17863	18708
GCA_037890135.1	GCA_037890135.1_01309	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.45	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP084158.1	1370353	1371831
GCA_000015545.1	GCA_000015545.1_01410	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP000539.1	1368196	1369884
GCA_000015545.1	GCA_000015545.1_01411	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP000539.1	1369895	1370182
GCA_000015545.1	GCA_000015545.1_01598	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	94	91	97.80	62.92	89	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP000539.1	1532372	1532656
GCA_000015545.1	GCA_000015545.1_02480	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	302	97.68	57.14	301	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP000539.1	2469674	2470564
GCA_000238115.1	GCA_000238115.1_01965	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_003505402.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JH414563.1	25471	27390
GCA_017655705.1	GCA_017655705.1_00786	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040410.1	811344	811718
GCA_011058795.1	GCA_011058795.1_00882	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP049231.1	855460	857379
GCA_011058795.1	GCA_011058795.1_00960	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	86.59	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP049231.1	954479	955957
GCA_000279855.1	GCA_000279855.1_00152	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	ALCT01000002.1	135180	136643
GCA_000279855.1	GCA_000279855.1_00153	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	ALCT01000002.1	136664	137881
GCA_000279855.1	GCA_000279855.1_01318	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	ALCT01000003.1	534701	536491
GCA_019334745.1	GCA_019334745.1_02311	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP079819.1	2603587	2605227
GCA_025147485.1	GCA_025147485.1_03083	cblA	CblA family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	296	296	100.00	100.00	296	WP_005827792.1	CblA family class A beta-lactamase	NF033098.1	CblA family class A beta-lactamase	CP102263.1	3702194	3703084
GCA_019149255.1	GCA_019149255.1_00662	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHSUW010000001.1	462080	463369
GCA_008726175.1	GCA_008726175.1_01493	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	45.03	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VYVD01000003.1	77460	78884
GCA_008726175.1	GCA_008726175.1_01667	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.49	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VYVD01000049.1	151	1932
GCA_023508855.1	GCA_023508855.1_00024	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP048007.1	26866	27939
GCA_023508855.1	GCA_023508855.1_00036	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP048007.1	38981	40987
GCA_023508855.1	GCA_023508855.1_00224	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP048007.1	244223	245515
GCA_023508855.1	GCA_023508855.1_00372	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP048007.1	392220	393065
GCA_023508855.1	GCA_023508855.1_00373	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP048007.1	393172	394929
GCA_023508855.1	GCA_023508855.1_00374	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP048007.1	394919	395299
GCA_023508855.1	GCA_023508855.1_02131	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP048007.1	2145195	2145614
GCA_030232145.1	GCA_030232145.1_00089	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJB010000013.1	12697	13551
GCA_001374975.1	GCA_001374975.1_01056	aph(3)-IIb	aminoglycoside O-phosphotransferase APH(3)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	267	268	100.00	99.25	268	WP_003113011.1	aminoglycoside O-phosphotransferase APH(3)-IIb	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CTDU01000024.1	107046	107849
GCA_001374975.1	GCA_001374975.1_01065	blaPDC-34	class C beta-lactamase PDC-34	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	397	397	100.00	100.00	397	WP_003137570.1	class C beta-lactamase PDC-34	NF000422.6	PDC family class C beta-lactamase	CTDU01000024.1	120205	121398
GCA_001374975.1	GCA_001374975.1_01248	blaOXA-488	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-488	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	262	262	100.00	100.00	262	WP_003097028.1	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase OXA-488	NF000432.2	OXA-50 family oxacillin-hydrolyzing class D beta-lactamase	CTDU01000025.1	97616	98404
GCA_001374975.1	GCA_001374975.1_02710	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CTDU01000036.1	92432	92668
GCA_001374975.1	GCA_001374975.1_02711	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CTDU01000036.1	92665	93030
GCA_001374975.1	GCA_001374975.1_02712	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.40	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CTDU01000036.1	93048	94733
GCA_001374975.1	GCA_001374975.1_02713	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CTDU01000036.1	94805	95080
GCA_001374975.1	GCA_001374975.1_02714	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CTDU01000036.1	95093	95443
GCA_001374975.1	GCA_001374975.1_02715	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CTDU01000036.1	95515	95949
GCA_001374975.1	GCA_001374975.1_04064	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	135	135	100.00	100.00	135	WP_003082280.1	FosA family fosfomycin resistance glutathione transferase	NF000094.1	FosA family fosfomycin resistance glutathione transferase	CTDU01000050.1	22961	23368
GCA_001374975.1	GCA_001374975.1_04549	mexX	multidrug efflux RND transporter periplasmic adaptor subunit MexX	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	396	396	100.00	98.99	396	AAF14522.1	multidrug efflux RND transporter periplasmic adaptor subunit MexX	NA	NA	CTDU01000055.1	39928	41118
GCA_001374975.1	GCA_001374975.1_04815	mexA	multidrug efflux RND transporter periplasmic adaptor subunit MexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	383	383	100.00	100.00	383	AAA74436.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	NF033834.1	multidrug efflux RND transporter periplasmic adaptor subunit MexA	CTDU01000057.1	244692	245843
GCA_001374975.1	GCA_001374975.1_05591	catB7	type B-4 chloramphenicol O-acetyltransferase CatB7	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	PARTIALP	177	212	83.49	98.87	177	WP_003112709.1	type B-4 chloramphenicol O-acetyltransferase CatB7	NF000490.1	type B chloramphenicol O-acetyltransferase	CTDU01000071.1	239440	239973
GCA_001374975.1	GCA_001374975.1_06042	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	414	414	100.00	100.00	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CTDU01000072.1	421631	422875
GCA_000241525.2	GCA_000241525.2_01046	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	302	97.02	52.70	296	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	AHIL01000043.1	336837	337742
GCA_000241525.2	GCA_000241525.2_02987	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	239	275	85.82	65.68	236	WP_117407753.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	AHIL01000026.1	303144	303863
GCA_000241525.2	GCA_000241525.2_04351	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	93.59	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	AHIL01000007.1	8821	9057
GCA_000241525.2	GCA_000241525.2_04352	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	AHIL01000007.1	9054	9419
GCA_000241525.2	GCA_000241525.2_04353	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	99.47	89.78	558	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AHIL01000007.1	9437	11119
GCA_000241525.2	GCA_000241525.2_04354	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	135	140	98.57	78.99	138	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	AHIL01000007.1	11158	11565
GCA_000241525.2	GCA_000241525.2_04355	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	94.51	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	AHIL01000007.1	11593	11868
GCA_000241525.2	GCA_000241525.2_04356	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	CAA70196.1	mercuric transport protein MerT	NA	NA	AHIL01000007.1	11884	12234
GCA_000241525.2	GCA_000241525.2_04357	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	AHIL01000007.1	12306	12761
GCA_030180215.1	GCA_030180215.1_00353	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JARXSK010000153.1	33	836
GCA_030180215.1	GCA_030180215.1_00354	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JARXSK010000153.1	836	1672
GCA_030180215.1	GCA_030180215.1_01911	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JARXSK010000082.1	84	899
GCA_030180215.1	GCA_030180215.1_01913	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JARXSK010000082.1	2133	2993
GCA_030180215.1	GCA_030180215.1_01969	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089072.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	JARXSK010000089.1	4159	5364
GCA_001402715.1	GCA_001402715.1_00899	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	153	147	97.28	48.61	144	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	LLVU01000005.1	162723	163184
GCA_030844935.1	GCA_030844935.1_00119	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASNMM010000001.1	129030	130949
GCA_030844935.1	GCA_030844935.1_01570	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASNMM010000001.1	1682282	1684063
GCA_030844935.1	GCA_030844935.1_01583	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNMM010000001.1	1696925	1697779
GCA_002906595.1	GCA_002906595.1_00069	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP024809.1	67843	69132
GCA_002906595.1	GCA_002906595.1_00072	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP024809.1	70429	72435
GCA_002906595.1	GCA_002906595.1_00091	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP024809.1	88205	88606
GCA_002906595.1	GCA_002906595.1_00092	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP024809.1	88624	89916
GCA_002906595.1	GCA_002906595.1_00176	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP024809.1	164745	166037
GCA_002906595.1	GCA_002906595.1_01220	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP024809.1	1184546	1185043
GCA_002906595.1	GCA_002906595.1_01712	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP024809.1	1678136	1679575
GCA_002906595.1	GCA_002906595.1_02305	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP024809.1	2266835	2268274
GCA_002906595.1	GCA_002906595.1_02309	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP024809.1	2271833	2273299
GCA_002906595.1	GCA_002906595.1_02310	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP024809.1	2273398	2274297
GCA_002906595.1	GCA_002906595.1_02312	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP024809.1	2275596	2276156
GCA_002906595.1	GCA_002906595.1_02313	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP024809.1	2276340	2277884
GCA_002906595.1	GCA_002906595.1_02534	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP024809.1	2503419	2504213
GCA_002906595.1	GCA_002906595.1_02535	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP024809.1	2504306	2504848
GCA_002906595.1	GCA_002906595.1_02540	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	CP024809.1	2508474	2508797
GCA_002906595.1	GCA_002906595.1_02542	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP024809.1	2510043	2510888
GCA_002906595.1	GCA_002906595.1_02543	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP024809.1	2510995	2512752
GCA_002906595.1	GCA_002906595.1_02544	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP024809.1	2512742	2513122
GCA_009717525.1	GCA_009717525.1_00320	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.91	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	WMYS01000001.1	322051	323775
GCA_009717525.1	GCA_009717525.1_00321	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.84	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	WMYS01000001.1	323777	325513
GCA_009717525.1	GCA_009717525.1_01037	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMYS01000002.1	352224	352652
GCA_009717525.1	GCA_009717525.1_01213	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYS01000002.1	516817	518034
GCA_009717525.1	GCA_009717525.1_01214	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYS01000002.1	518154	519617
GCA_000025085.1	GCA_000025085.1_00174	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP001837.1	186935	188227
GCA_000025085.1	GCA_000025085.1_00904	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP001837.1	948476	948856
GCA_000025085.1	GCA_000025085.1_00905	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP001837.1	948846	950603
GCA_000025085.1	GCA_000025085.1_00906	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP001837.1	950710	951555
GCA_000025085.1	GCA_000025085.1_01702	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP001837.1	1721240	1722085
GCA_000025085.1	GCA_000025085.1_01703	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP001837.1	1722192	1723949
GCA_000025085.1	GCA_000025085.1_01704	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP001837.1	1723939	1724319
GCA_000025085.1	GCA_000025085.1_02082	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP001837.1	2100440	2100859
GCA_000025085.1	GCA_000025085.1_02632	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP001837.1	2652257	2653330
GCA_027670365.1	GCA_027670365.1_01141	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	100.00	43.90	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQEBV010000029.1	27748	28101
GCA_022345785.1	GCA_022345785.1_01163	tet(33)	tetracycline efflux MFS transporter Tet(33)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	419	407	100.00	99.26	407	WP_109545038.1	tetracycline efflux MFS transporter Tet(33)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	JAKRDP010000027.1	7529	8788
GCA_022345785.1	GCA_022345785.1_01174	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JAKRDP010000029.1	3622	5403
GCA_022345785.1	GCA_022345785.1_02397	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	469	547	84.28	46.09	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRDP010000008.1	651	2060
GCA_022345785.1	GCA_022345785.1_02412	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDP010000008.1	18481	19335
GCA_001647855.1	GCA_001647855.1_01290	catA2	type A-2 chloramphenicol O-acetyltransferase CatII	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	213	213	100.00	100.00	213	WP_011751353.1	type A-2 chloramphenicol O-acetyltransferase CatII	NF000491.1	type A chloramphenicol O-acetyltransferase	CP015431.1	1274172	1274813
GCA_001647855.1	GCA_001647855.1_01297	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089068.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CP015431.1	1279500	1280705
GCA_001647855.1	GCA_001647855.1_01337	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP015431.1	1309337	1310977
GCA_019929015.1	GCA_019929015.1_01349	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHZOU010000003.1	179505	181145
GCA_019929015.1	GCA_019929015.1_01858	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHZOU010000004.1	214716	216635
GCA_019929015.1	GCA_019929015.1_01859	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAHZOU010000004.1	217743	218480
GCA_000448685.2	GCA_000448685.2_00639	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP013216.1	628198	629415
GCA_000448685.2	GCA_000448685.2_00640	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP013216.1	629535	630998
GCA_010223255.1	GCA_010223255.1_00243	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	295	303	88.45	40.67	268	WP_041881964.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP027011.1	282770	283657
GCA_021496365.1	GCA_021496365.1_00013	blaOXA	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	274	274	100.00	97.45	274	WP_240067726.1	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase OXA-1044	NF000417.2	OXA-211 family carbapenem-hydrolyzing class D beta-lactamase	CP045103.1	15164	15988
GCA_021496365.1	GCA_021496365.1_01099	blaOXA-1006	class D beta-lactamase OXA-1006	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	275	275	100.00	100.00	275	WP_231869629.1	class D beta-lactamase OXA-1006	NF012161.0	class D beta-lactamase	CP045103.1	1159680	1160507
GCA_021496365.1	GCA_021496365.1_01297	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	96.98	76.36	385	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP045103.1	1368621	1369841
GCA_009717165.1	GCA_009717165.1_00307	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYA01000001.1	201452	202669
GCA_009717165.1	GCA_009717165.1_00308	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYA01000001.1	202789	204252
GCA_009717165.1	GCA_009717165.1_00313	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMYA01000001.1	206119	206547
GCA_014161995.1	GCA_014161995.1_00057	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	213	221	95.02	68.57	210	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	AP022213.1	52340	52981
GCA_014161995.1	GCA_014161995.1_02561	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	260	259	99.61	41.76	261	WP_014386410.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	AP022213.1	2681411	2682193
GCA_014161995.1	GCA_014161995.1_02761	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	414	100.00	75.48	416	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	AP022213.1	2936376	2937617
GCA_014161995.1	GCA_014161995.1_02839	blaPOM-1	subclass B3 metallo-beta-lactamase POM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	286	286	100.00	100.00	286	WP_044403015.1	subclass B3 metallo-beta-lactamase POM-1	NF000438.2	POM family subclass B3 metallo-beta-lactamase	AP022213.1	3016666	3017526
GCA_000251605.2	GCA_000251605.2_00275	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	100.00	346	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	AIKC01000006.1	930	1970
GCA_000251605.2	GCA_000251605.2_00282	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AIKC01000006.1	5277	6494
GCA_000251605.2	GCA_000251605.2_00426	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	AIKC01000005.1	54022	54759
GCA_000251605.2	GCA_000251605.2_01541	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AIKC01000004.1	1038449	1038877
GCA_000251605.2	GCA_000251605.2_01636	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	596	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AIKC01000004.1	1118616	1120406
GCA_019703655.1	GCA_019703655.1_01549	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.98	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018776.1	1565485	1566879
GCA_005221325.1	GCA_005221325.1_00717	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	274	269	92.57	52.11	261	WP_338424127.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP039888.1	696208	697032
GCA_005221325.1	GCA_005221325.1_02080	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	151	146	94.52	55.80	138	WP_044030410.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP039888.1	2036656	2037111
GCA_005221325.1	GCA_005221325.1_03024	catB1	type B-1 chloramphenicol O-acetyltransferase CatB1	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	209	209	100.00	98.09	209	WP_010974114.1	type B-1 chloramphenicol O-acetyltransferase CatB1	NF000490.1	type B chloramphenicol O-acetyltransferase	CP039889.1	84875	85504
GCA_005221325.1	GCA_005221325.1_04889	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	385	396	96.97	51.17	385	WP_280147732.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP039889.1	2131151	2132308
GCA_005221325.1	GCA_005221325.1_05046	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	145	147	98.64	56.55	145	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP039890.1	16824	17261
GCA_005221325.1	GCA_005221325.1_05489	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	313	147	92.52	55.15	136	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP039891.1	29632	30573
GCA_962747755.1	GCA_962747755.1_00007	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIZQ010000001.1	8073	8978
GCA_962747755.1	GCA_962747755.1_00373	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIZQ010000003.1	76470	77849
GCA_962747755.1	GCA_962747755.1_00939	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIZQ010000008.1	46589	48115
GCA_962747755.1	GCA_962747755.1_01566	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	251	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIZQ010000018.1	20860	21615
GCA_962747755.1	GCA_962747755.1_01567	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIZQ010000018.1	21732	22970
GCA_018291825.1	GCA_018291825.1_00962	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.33	76.12	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP072242.1	1323764	1324645
GCA_018291825.1	GCA_018291825.1_01105	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	CP072242.1	1503286	1504491
GCA_018291825.1	GCA_018291825.1_01106	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	CP072242.1	1504516	1505028
GCA_018291825.1	GCA_018291825.1_02246	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	99.32	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP072242.1	2946438	2947769
GCA_018291825.1	GCA_018291825.1_03382	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP072242.1	4307083	4309008
GCA_020091305.1	GCA_020091305.1_02260	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.33	75.09	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP081898.1	3011126	3012007
GCA_020091305.1	GCA_020091305.1_03515	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	44.66	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP081898.1	4568503	4568829
GCA_020091305.1	GCA_020091305.1_03710	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	CP081898.1	4794493	4795356
GCA_020091305.1	GCA_020091305.1_03711	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	378	388	97.42	99.74	378	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	CP081898.1	4795532	4796668
GCA_020091305.1	GCA_020091305.1_03712	tet(X1)	tetracycline-inactivating monooxygenase Tet(X1)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	379	379	100.00	99.74	379	WP_204376222.1	tetracycline-inactivating monooxygenase Tet(X1)	NA	NA	CP081898.1	4796867	4798006
GCA_020091305.1	GCA_020091305.1_03713	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_063844771.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP081898.1	4798312	4799112
GCA_020091305.1	GCA_020091305.1_03723	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	97.66	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP081898.1	4813190	4815115
GCA_020091305.1	GCA_020091305.1_03835	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	99.77	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP081898.1	4917706	4919037
GCA_020091305.1	GCA_020091305.1_04432	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP081898.1	5613227	5615152
GCA_001633025.1	GCA_001633025.1_00173	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	107	99.07	46.23	106	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LWMH01000001.1	154128	154487
GCA_001633025.1	GCA_001633025.1_00184	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family A	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	175	169	97.63	64.24	165	AIQ64103.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	NF040503.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	LWMH01000001.1	164702	165229
GCA_001633025.1	GCA_001633025.1_00501	merB1	organomercurial lyase MerB1	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	218	218	100.00	100.00	218	BAA82061.2	organomercurial lyase MerB1	NF033555.1	organomercurial lyase MerB	LWMH01000001.1	463928	464584
GCA_001633025.1	GCA_001633025.1_00502	merB2	organomercurial lyase MerB2	plus	STRESS	METAL	NA	NA	EXACTP	209	209	100.00	100.00	209	BAA89007.1	organomercurial lyase MerB2	NA	NA	LWMH01000001.1	464734	465363
GCA_001633025.1	GCA_001633025.1_00503	merR2	mercury resistance transcriptional regulator MerR2	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	129	129	100.00	100.00	129	AAD25959.1	mercury resistance transcriptional regulator MerR2	NA	NA	LWMH01000001.1	465360	465749
GCA_001633025.1	GCA_001633025.1_00504	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	99.21	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LWMH01000001.1	466650	468545
GCA_001633025.1	GCA_001633025.1_00506	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	98	98	100.00	100.00	98	AAA83975.1	mercuric transport protein MerT	NF033560.1	mercuric transport protein MerT	LWMH01000001.1	468962	469258
GCA_001633025.1	GCA_001633025.1_00508	merR1	mercury resistance transcriptional regulator MerR1	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	132	132	100.00	100.00	132	AAA83973.1	mercury resistance transcriptional regulator MerR1	NA	NA	LWMH01000001.1	469539	469937
GCA_001633025.1	GCA_001633025.1_00509	merB3	organomercurial lyase MerB3	plus	STRESS	METAL	NA	NA	EXACTP	242	242	100.00	100.00	242	BAA89005.2	organomercurial lyase MerB3	NA	NA	LWMH01000001.1	470015	470743
GCA_001633025.1	GCA_001633025.1_01560	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	312	304	92.11	66.90	287	WP_087344360.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	LWMH01000001.1	1555025	1555963
GCA_001633025.1	GCA_001633025.1_02932	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	97.56	44.29	280	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	LWMH01000001.1	3130888	3131751
GCA_001633025.1	GCA_001633025.1_04357	aac(2)-IIb	kasugamycin N-acetyltransferase AAC(2)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	HMM	239	240	99.58	66.53	239	WP_071224044.1	kasugamycin N-acetyltransferase AAC(2)-IIb	NF033472.1	kasugamycin N-acetyltransferase AAC(2)-IIb	LWMH01000001.1	4627066	4627785
GCA_001633025.1	GCA_001633025.1_04529	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	67.59	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	LWMH01000001.1	4816703	4817353
GCA_001633025.1	GCA_001633025.1_04677	msr	Msr family ABC-F type ribosomal protection protein	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	486	487	98.77	66.32	481	WP_000420313.1	Msr family ABC-F type ribosomal protection protein	NF000168.2	Msr family ABC-F type ribosomal protection protein	LWMH01000001.1	4979924	4981384
GCA_001633025.1	GCA_001633025.1_05627	taeA	ABC-F type ribosomal protection protein TaeA	core	AMR	AMR	PLEUROMUTILIN	TIAMULIN	BLASTP	651	648	100.00	91.71	651	WP_071223118.1	ABC-F type ribosomal protection protein TaeA	NA	NA	LWMH01000002.1	861255	863210
GCA_001633025.1	GCA_001633025.1_05808	tetB(58)	tetracycline efflux ABC transporter Tet(58) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	271	271	100.00	91.88	271	WP_071223302.1	tetracycline efflux ABC transporter Tet(58) subunit B	NA	NA	LWMH01000002.1	1072978	1073793
GCA_001633025.1	GCA_001633025.1_06370	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	498	494	99.60	62.20	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	LWMH01000003.1	145114	146610
GCA_001633025.1	GCA_001633025.1_06470	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	267	86.52	52.56	234	WP_003235647.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	LWMH01000003.1	251678	252487
GCA_001633025.1	GCA_001633025.1_06551	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	211	212	99.53	76.78	211	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	LWMH01000003.1	327911	328546
GCA_016808715.1	GCA_016808715.1_00933	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	105	104	100.00	97.12	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	QVVG01000019.1	10704	11021
GCA_016808715.1	GCA_016808715.1_00934	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	QVVG01000019.1	11018	12307
GCA_016808715.1	GCA_016808715.1_00935	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	QVVG01000019.1	12325	12720
GCA_001469295.1	GCA_001469295.1_00781	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KQ759747.1	174413	174841
GCA_963394945.1	GCA_963394945.1_00450	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.42	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPJ010000002.1	76152	77390
GCA_963394945.1	GCA_963394945.1_00658	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPJ010000003.1	81805	83184
GCA_963394945.1	GCA_963394945.1_00833	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.64	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPJ010000004.1	52270	53796
GCA_916720605.1	GCA_916720605.1_00082	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAKARO010000002.1	19124	20764
GCA_002940975.1	GCA_002940975.1_00627	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	PNFS01000013.1	1908	2231
GCA_002940975.1	GCA_002940975.1_01445	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PNFS01000003.1	292563	293855
GCA_002940975.1	GCA_002940975.1_02555	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	PNFS01000008.1	15097	15942
GCA_002940975.1	GCA_002940975.1_02556	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.04	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	PNFS01000008.1	16049	17806
GCA_002940975.1	GCA_002940975.1_02557	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	PNFS01000008.1	17796	18176
GCA_002860785.1	GCA_002860785.1_01358	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	PKIA01000003.1	222388	223605
GCA_002860785.1	GCA_002860785.1_01359	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	PKIA01000003.1	223725	225188
GCA_002860785.1	GCA_002860785.1_01447	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.29	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PKIA01000004.1	95539	97179
GCA_029991895.1	GCA_029991895.1_00585	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	SSCH01000014.1	21963	22904
GCA_001431425.1	GCA_001431425.1_00134	blaCESS	CESS family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	HMM	296	297	99.66	73.99	296	WP_062166693.1	CESS family extended-spectrum class A beta-lactamase	NF050797.1	CESS family extended-spectrum class A beta-lactamase	LDJG01000001.1	129696	130586
GCA_001431425.1	GCA_001431425.1_00234	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	324	303	97.36	55.74	305	WP_063857820.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	LDJG01000010.1	58519	59493
GCA_001431425.1	GCA_001431425.1_00603	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	414	396	99.24	67.01	394	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	LDJG01000014.1	61704	62948
GCA_001431425.1	GCA_001431425.1_01085	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LDJG01000017.1	148291	149979
GCA_001431425.1	GCA_001431425.1_01086	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	LDJG01000017.1	149990	150277
GCA_001431425.1	GCA_001431425.1_01103	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	346	345	93.91	36.45	332	WP_063842277.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	LDJG01000018.1	1167	2207
GCA_001431425.1	GCA_001431425.1_01337	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	346	345	95.94	35.80	338	WP_063842277.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	LDJG01000002.1	10605	11645
GCA_001431425.1	GCA_001431425.1_02079	aph(6)-I	APH(6)-I family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	269	270	99.26	74.25	268	WP_063841666.1	APH(6)-I family aminoglycoside O-phosphotransferase	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	LDJG01000003.1	15884	16693
GCA_001431425.1	GCA_001431425.1_02115	copB	copper-binding protein CopB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	425	422	100.00	94.59	425	ADR70748.1	copper-binding protein CopB	NA	NA	LDJG01000003.1	61001	62278
GCA_001431425.1	GCA_001431425.1_02116	copA	laccase-like oxidase CopA	plus	STRESS	METAL	COPPER	COPPER	PARTIALP	556	623	89.25	98.74	556	ADR70747.1	laccase-like oxidase CopA	NA	NA	LDJG01000003.1	62275	63945
GCA_001431425.1	GCA_001431425.1_03569	ble	BLMT family bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	HMM	120	126	94.44	89.92	119	WP_000131935.1	BLMT family bleomycin binding protein	NF000005.4	BLMT family bleomycin binding protein	LDJG01000008.1	197897	198259
GCA_001431425.1	GCA_001431425.1_03597	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	276	141	96.45	58.82	136	AAB09628.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	LDJG01000008.1	221951	222781
GCA_003992175.1	GCA_003992175.1_00284	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_003505402.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	RQVM01000001.1	302597	304516
GCA_027158175.1	GCA_027158175.1_00765	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	145	147	95.24	46.43	140	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	JAPVLY010000012.1	14670	15107
GCA_027158175.1	GCA_027158175.1_02606	catB	type B chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	209	210	99.05	73.56	208	WP_031281281.1	type B chloramphenicol O-acetyltransferase	NF000490.1	type B chloramphenicol O-acetyltransferase	JAPVLY010000005.1	292690	293319
GCA_027158175.1	GCA_027158175.1_02641	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	302	98.68	43.46	306	WP_105777201.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAPVLY010000005.1	327990	328874
GCA_900475515.1	GCA_900475515.1_00906	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	LS483390.1	867580	868779
GCA_000613325.1	GCA_000613325.1_01096	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	BAIP01000012.1	64038	65228
GCA_009379305.1	GCA_009379305.1_01566	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXDH01000008.1	110529	111470
GCA_000210935.1	GCA_000210935.1_00918	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417517.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	FQ312029.1	885994	887211
GCA_000210935.1	GCA_000210935.1_00919	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420317.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	FQ312029.1	887331	888794
GCA_000210935.1	GCA_000210935.1_00938	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	FQ312029.1	901975	903174
GCA_005888205.1	GCA_005888205.1_00174	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LNKN01000014.1	3843	5237
GCA_018407745.1	GCA_018407745.1_00558	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAGSXC010000001.1	568678	569751
GCA_018407745.1	GCA_018407745.1_00599	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAGSXC010000001.1	623023	623445
GCA_018407745.1	GCA_018407745.1_02026	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JAGSXC010000005.1	19591	20232
GCA_018407745.1	GCA_018407745.1_02051	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAGSXC010000005.1	45181	46026
GCA_018407745.1	GCA_018407745.1_02052	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.89	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAGSXC010000005.1	46133	47890
GCA_018407745.1	GCA_018407745.1_02053	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAGSXC010000005.1	47880	48260
GCA_018407745.1	GCA_018407745.1_02055	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGSXC010000005.1	48567	49856
GCA_018407745.1	GCA_018407745.1_02440	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	86.01	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGSXC010000011.1	22532	23821
GCA_018407745.1	GCA_018407745.1_02513	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JAGSXC010000016.1	475	1092
GCA_002966715.1	GCA_002966715.1_00137	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP020013.1	128994	129854
GCA_002966715.1	GCA_002966715.1_01437	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP020013.1	1413804	1415198
GCA_000279495.1	GCA_000279495.1_00123	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	ALCJ01000003.1	91524	92741
GCA_000279495.1	GCA_000279495.1_00124	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	ALCJ01000003.1	92861	94324
GCA_000279495.1	GCA_000279495.1_00931	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	ALCJ01000004.1	84949	86148
GCA_900474705.1	GCA_900474705.1_00024	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	LS483312.1	26865	27938
GCA_900474705.1	GCA_900474705.1_00173	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.54	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LS483312.1	194268	195560
GCA_017167635.1	GCA_017167635.1_00141	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAFDPM010000015.1	415	1314
GCA_017167635.1	GCA_017167635.1_00142	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAFDPM010000015.1	1413	2879
GCA_017167635.1	GCA_017167635.1_01247	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFDPM010000003.1	126353	127645
GCA_016903575.1	GCA_016903575.1_01012	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP069954.1	1109243	1110310
GCA_016903575.1	GCA_016903575.1_01064	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP069954.1	1169495	1169923
GCA_016903575.1	GCA_016903575.1_01464	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP069954.1	1577929	1578426
GCA_016903575.1	GCA_016903575.1_02009	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP069954.1	2090522	2091019
GCA_016903575.1	GCA_016903575.1_02063	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP069954.1	2133780	2134625
GCA_016903575.1	GCA_016903575.1_02064	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP069954.1	2134732	2136489
GCA_016903575.1	GCA_016903575.1_02065	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP069954.1	2136479	2136859
GCA_016903575.1	GCA_016903575.1_02343	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	BLASTP	122	122	100.00	96.72	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP069956.1	17270	17638
GCA_016903575.1	GCA_016903575.1_02376	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP069955.1	14393	15937
GCA_016903575.1	GCA_016903575.1_02377	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP069955.1	16121	16681
GCA_000016805.1	GCA_000016805.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP000703.1	38743	40749
GCA_000016805.1	GCA_000016805.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP000703.1	40849	42606
GCA_000016805.1	GCA_000016805.1_00036	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP000703.1	42606	42977
GCA_000016805.1	GCA_000016805.1_00045	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP000703.1	49676	50407
GCA_000016805.1	GCA_000016805.1_00046	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP000703.1	50533	51315
GCA_000016805.1	GCA_000016805.1_00128	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP000703.1	145477	146835
GCA_000016805.1	GCA_000016805.1_00392	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP000703.1	417280	418635
GCA_000016805.1	GCA_000016805.1_00429	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP000703.1	451943	452554
GCA_000016805.1	GCA_000016805.1_01791	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP000703.1	1810620	1811351
GCA_000016805.1	GCA_000016805.1_01792	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP000703.1	1811477	1812259
GCA_000016805.1	GCA_000016805.1_01910	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP000703.1	1954260	1955552
GCA_000016805.1	GCA_000016805.1_01948	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	CP000703.1	1985809	1986531
GCA_000016805.1	GCA_000016805.1_01949	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP000703.1	1986656	1987363
GCA_000016805.1	GCA_000016805.1_01954	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP000703.1	1991494	1992477
GCA_000016805.1	GCA_000016805.1_01955	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.36	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP000703.1	1992479	1993414
GCA_000016805.1	GCA_000016805.1_01963	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP000703.1	1999616	2000371
GCA_000016805.1	GCA_000016805.1_01964	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP000703.1	2000410	2000805
GCA_000016805.1	GCA_000016805.1_01966	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP000703.1	2001335	2002063
GCA_000016805.1	GCA_000016805.1_01967	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP000703.1	2002098	2002817
GCA_000016805.1	GCA_000016805.1_01968	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP000703.1	2003098	2003862
GCA_000016805.1	GCA_000016805.1_02126	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP000703.1	2130160	2130510
GCA_000016805.1	GCA_000016805.1_02131	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP000703.1	2132724	2133215
GCA_000016805.1	GCA_000016805.1_02204	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP000703.1	2185424	2185558
GCA_000016805.1	GCA_000016805.1_02350	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP000703.1	2337278	2338720
GCA_000016805.1	GCA_000016805.1_02524	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP000703.1	2490583	2491002
GCA_000016805.1	GCA_000016805.1_02609	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP000703.1	2579329	2580294
GCA_000016805.1	GCA_000016805.1_02610	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP000703.1	2580861	2581808
GCA_000016805.1	GCA_000016805.1_02611	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP000703.1	2581810	2582787
GCA_000016805.1	GCA_000016805.1_02835	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP000703.1	2819942	2821471
GCA_000016805.1	GCA_000016805.1_02869	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP000703.1	2864801	2865853
GCA_000016805.1	GCA_000016805.1_02926	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP000704.1	9571	9951
GCA_000016805.1	GCA_000016805.1_02927	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	96.58	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP000704.1	9941	11698
GCA_000016805.1	GCA_000016805.1_02928	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733275.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP000704.1	11805	12650
GCA_000016805.1	GCA_000016805.1_02933	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP000704.1	15476	16093
GCA_000016805.1	GCA_000016805.1_02943	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP000704.1	23272	24711
GCA_900461385.1	GCA_900461385.1_00431	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UFXE01000004.1	416720	418144
GCA_900454095.1	GCA_900454095.1_01144	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	UGRN01000001.1	1188931	1189836
GCA_900454095.1	GCA_900454095.1_01278	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	UGRN01000001.1	1349502	1350740
GCA_900454095.1	GCA_900454095.1_01279	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	UGRN01000001.1	1350987	1351619
GCA_900454095.1	GCA_900454095.1_01471	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	UGRN01000001.1	1551191	1552717
GCA_003789135.1	GCA_003789135.1_00042	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	731	100.00	83.04	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	RHFN01000001.1	55384	57582
GCA_003789135.1	GCA_003789135.1_00848	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	96.67	91.03	290	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	RHFN01000013.1	65754	66647
GCA_003789135.1	GCA_003789135.1_01614	blaCTX-M	CTX-M family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	291	291	100.00	99.31	291	WP_063860092.1	extended-spectrum class A beta-lactamase CTX-M-95	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	RHFN01000002.1	100568	101443
GCA_003789135.1	GCA_003789135.1_03896	blaKPC-2	carbapenem-hydrolyzing class A beta-lactamase KPC-2	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	293	293	100.00	100.00	293	WP_004199234.1	carbapenem-hydrolyzing class A beta-lactamase KPC-2	NF012141.1	KPC family carbapenem-hydrolyzing class A beta-lactamase	RHFN01000045.1	14215	15096
GCA_003789135.1	GCA_003789135.1_03958	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	AAB09624.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	RHFN01000049.1	403	756
GCA_003789135.1	GCA_003789135.1_03959	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	98.33	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	RHFN01000049.1	804	1166
GCA_003789135.1	GCA_003789135.1_03960	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	98.97	583	AAB09626.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	RHFN01000049.1	1184	2935
GCA_003789135.1	GCA_003789135.1_03961	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.14	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	RHFN01000049.1	2984	4273
GCA_003789135.1	GCA_003789135.1_03962	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	99.29	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	RHFN01000049.1	4286	4711
GCA_003789135.1	GCA_003789135.1_04881	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	94.79	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	RHFN01000008.1	4708	5286
GCA_003789135.1	GCA_003789135.1_04885	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	193	193	100.00	92.23	193	AAA86846.1	tellurium resistance-associated protein TerZ	NA	NA	RHFN01000008.1	8033	8614
GCA_003789135.1	GCA_003789135.1_04892	terW	tellurium resistance protein TerW	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	155	155	100.00	94.19	155	AAC44736.1	tellurium resistance protein TerW	NA	NA	RHFN01000008.1	15183	15650
GCA_003789135.1	GCA_003789135.1_05134	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	142	139	99.28	83.33	138	WP_004857515.1	FosA family fosfomycin resistance glutathione transferase	NF000221.4	FosA family fosfomycin resistance glutathione transferase	RHFN01000009.1	23454	23882
GCA_015254865.1	GCA_015254865.1_00604	tet(A)	tetracycline efflux MFS transporter Tet(A)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	424	399	100.00	99.75	399	WP_011645018.1	tetracycline efflux MFS transporter Tet(A)	NF012193.0	tetracycline efflux MFS transporter Tet(A)	JABZPH010000024.1	27617	28891
GCA_916720155.1	GCA_916720155.1_01995	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	271	270	100.00	56.46	271	WP_311033295.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAKAQJ010000123.1	833	1648
GCA_028325655.1	GCA_028325655.1_01419	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAQMJK010000004.1	138537	140015
GCA_028325655.1	GCA_028325655.1_01852	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQMJK010000006.1	128545	130008
GCA_028325655.1	GCA_028325655.1_01853	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQMJK010000006.1	130128	131345
GCA_025145775.1	GCA_025145775.1_03204	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXLT010000090.1	8945	10345
GCA_030439935.1	GCA_030439935.1_01350	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQFJC010000004.1	157892	159109
GCA_030439935.1	GCA_030439935.1_01351	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQFJC010000004.1	159229	160692
GCA_002861865.1	GCA_002861865.1_01594	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	392	100.00	51.39	395	WP_003971483.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	PKJA01000001.1	1777322	1778497
GCA_002861865.1	GCA_002861865.1_01609	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	268	272	92.28	56.57	251	WP_063840676.1	APH(3) family aminoglycoside O-phosphotransferase	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	PKJA01000001.1	1798406	1799212
GCA_002861865.1	GCA_002861865.1_02173	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	274	272	99.63	52.92	274	WP_063840676.1	APH(3) family aminoglycoside O-phosphotransferase	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	PKJA01000003.1	60049	60873
GCA_002861865.1	GCA_002861865.1_02222	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	387	392	95.41	53.99	376	WP_003971483.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	PKJA01000003.1	106127	107290
GCA_002861865.1	GCA_002861865.1_02248	tet(65)	tetracycline efflux MFS transporter Tet(65)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	384	383	100.00	99.74	383	WP_152609570.1	tetracycline efflux MFS transporter Tet(65)	NF045684.1	tetracycline efflux MFS transporter Tet(65)	PKJA01000003.1	134969	136123
GCA_013726395.1	GCA_013726395.1_00449	blaACT-55	cephalosporin-hydrolyzing class C beta-lactamase ACT-55	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	381	381	100.00	100.00	381	WP_047052637.1	cephalosporin-hydrolyzing class C beta-lactamase ACT-55	NF000385.4	ACT family cephalosporin-hydrolyzing class C beta-lactamase	CP056132.1	448048	449193
GCA_013726395.1	GCA_013726395.1_01471	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	99.29	87.14	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP056132.1	1499293	1499724
GCA_013726395.1	GCA_013726395.1_02006	ncrY	nickel resistance OB fold protein NcrY	plus	STRESS	METAL	NICKEL	NICKEL	PARTIALP	129	140	84.29	100.00	118	ABF61437.1	nickel resistance OB fold protein NcrY	NA	NA	CP056132.1	1987134	1987523
GCA_013726395.1	GCA_013726395.1_02007	ncrC	Ni(II)/Co(II) efflux transporter permease subunit NcrC	plus	STRESS	METAL	COPPER/NICKEL	COPPER/NICKEL	EXACTP	376	376	100.00	100.00	376	ADF64798.1	Ni(II)/Co(II) efflux transporter permease subunit NcrC	NA	NA	CP056132.1	1987697	1988827
GCA_013726395.1	GCA_013726395.1_02008	ncrB	nickel-sensing transcriptional repressor NcrB	plus	STRESS	METAL	NICKEL	NICKEL	EXACTP	89	89	100.00	100.00	89	ABF61435.1	nickel-sensing transcriptional repressor NcrB	NA	NA	CP056132.1	1988840	1989109
GCA_013726395.1	GCA_013726395.1_02009	ncrA	Metal Resistance	plus	STRESS	METAL	NICKEL	NICKEL	EXACTP	432	432	100.00	100.00	432	ABF61434.1	Metal Resistance	NA	NA	CP056132.1	1989215	1990513
GCA_013726395.1	GCA_013726395.1_02144	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	101	102	100.00	77.14	105	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP056132.1	2101522	2101827
GCA_013726395.1	GCA_013726395.1_02159	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	225	217	94.01	65.37	205	WP_063843208.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP056132.1	2117368	2118045
GCA_013726395.1	GCA_013726395.1_03275	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	100.00	96.38	1050	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP056132.1	3298311	3301463
GCA_013726395.1	GCA_013726395.1_04414	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	92.36	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	CP056132.1	4428288	4428722
GCA_013726395.1	GCA_013726395.1_04415	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP056132.1	4428940	4430340
GCA_013726395.1	GCA_013726395.1_04416	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP056132.1	4430337	4431017
GCA_013726395.1	GCA_013726395.1_04417	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP056132.1	4431072	4432001
GCA_013726395.1	GCA_013726395.1_04418	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP056132.1	4432006	4432386
GCA_013726395.1	GCA_013726395.1_04419	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP056132.1	4432426	4433322
GCA_013726395.1	GCA_013726395.1_04420	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.83	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP056132.1	4433322	4435139
GCA_013726395.1	GCA_013726395.1_04424	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	813	824	98.79	98.28	814	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP056132.1	4437121	4439562
GCA_013726395.1	GCA_013726395.1_04426	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	99.43	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP056132.1	4440217	4443363
GCA_013726395.1	GCA_013726395.1_04427	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	98.37	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP056132.1	4443374	4444666
GCA_013726395.1	GCA_013726395.1_04428	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP056132.1	4444780	4445133
GCA_013726395.1	GCA_013726395.1_04429	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.26	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP056132.1	4445162	4446547
GCA_013726395.1	GCA_013726395.1_04430	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	98.23	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP056132.1	4446737	4447417
GCA_013726395.1	GCA_013726395.1_04431	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	493	491	100.00	97.56	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP056132.1	4447410	4448891
GCA_013726395.1	GCA_013726395.1_04432	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	EXACTP	143	143	100.00	100.00	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP056132.1	4449136	4449567
GCA_013726395.1	GCA_013726395.1_04594	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	294	300	97.33	90.41	292	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	CP056132.1	4639311	4640195
GCA_013726395.1	GCA_013726395.1_04735	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	98.94	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	CP056133.1	12191	12760
GCA_013726395.1	GCA_013726395.1_04736	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	99.16	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP056133.1	12866	15715
GCA_013726395.1	GCA_013726395.1_04738	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	99.34	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	CP056133.1	15943	16401
GCA_013726395.1	GCA_013726395.1_04739	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.34	304	APX31172.1	heat resistance protein YfdX1	NA	NA	CP056133.1	16424	17338
GCA_013726395.1	GCA_013726395.1_04740	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	98.98	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP056133.1	17441	18328
GCA_013726395.1	GCA_013726395.1_04741	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	213	203	100.00	96.06	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CP056133.1	18418	19059
GCA_013726395.1	GCA_013726395.1_04743	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	EXACTP	146	146	100.00	100.00	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	CP056133.1	20243	20683
GCA_013726395.1	GCA_013726395.1_04744	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	569	571	99.65	99.12	569	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	CP056133.1	20687	22396
GCA_013726395.1	GCA_013726395.1_04745	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	95.15	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	CP056133.1	22399	22896
GCA_900086615.2	GCA_900086615.2_00048	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LT571449.1	47287	47667
GCA_900086615.2	GCA_900086615.2_00050	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LT571449.1	49517	50362
GCA_900086615.2	GCA_900086615.2_00293	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LT571449.1	307082	308374
GCA_900086615.2	GCA_900086615.2_01726	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LT571449.1	1720989	1721369
GCA_900086615.2	GCA_900086615.2_01727	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LT571449.1	1721359	1723116
GCA_900086615.2	GCA_900086615.2_01728	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LT571449.1	1723223	1724068
GCA_900086615.2	GCA_900086615.2_01751	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	LT571449.1	1744558	1745199
GCA_900086615.2	GCA_900086615.2_01870	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	LT571449.1	1819586	1821025
GCA_900086615.2	GCA_900086615.2_02566	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	LT571449.1	2542699	2543766
GCA_900086615.2	GCA_900086615.2_02616	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	LT571449.1	2601563	2601799
GCA_900086615.2	GCA_900086615.2_02693	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LT571449.1	2682677	2683024
GCA_900086615.2	GCA_900086615.2_02696	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LT571449.1	2685193	2686491
GCA_900086615.2	GCA_900086615.2_02705	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	LT571449.1	2693945	2694595
GCA_900086615.2	GCA_900086615.2_02706	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LT571449.1	2694677	2696320
GCA_900086615.2	GCA_900086615.2_02707	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	LT571449.1	2696378	2696716
GCA_900086615.2	GCA_900086615.2_02776	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	LT571449.1	2756158	2756529
GCA_900086615.2	GCA_900086615.2_02777	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	LT571449.1	2756529	2758286
GCA_900086615.2	GCA_900086615.2_02778	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LT571449.1	2758386	2760392
GCA_900086615.2	GCA_900086615.2_02783	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	LT571449.1	2763862	2764605
GCA_900086615.2	GCA_900086615.2_02784	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	LT571449.1	2764828	2765226
GCA_900086615.2	GCA_900086615.2_02836	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	LT571450.1	27879	30953
GCA_900086615.2	GCA_900086615.2_02853	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	LT571451.1	1185	1919
GCA_900086615.2	GCA_900086615.2_02864	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	LR736240.1	8997	9557
GCA_900086615.2	GCA_900086615.2_02865	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	LR736240.1	9741	11285
GCA_019653615.1	GCA_019653615.1_00037	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	668	668	100.00	99.85	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP077098.1	41207	43213
GCA_019653615.1	GCA_019653615.1_00114	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	99.78	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP077098.1	123523	124881
GCA_019653615.1	GCA_019653615.1_00322	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP077098.1	357942	359297
GCA_019653615.1	GCA_019653615.1_00360	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP077098.1	392525	393136
GCA_019653615.1	GCA_019653615.1_00833	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	242	242	100.00	100.00	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP077098.1	863609	864337
GCA_019653615.1	GCA_019653615.1_00834	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.17	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP077098.1	864361	865089
GCA_019653615.1	GCA_019653615.1_00854	seb	staphylococcal enterotoxin type B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	AAA88550.1	staphylococcal enterotoxin type B	NA	NA	CP077098.1	875287	876087
GCA_019653615.1	GCA_019653615.1_01218	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP077098.1	1245207	1246646
GCA_019653615.1	GCA_019653615.1_01481	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP077098.1	1544034	1544531
GCA_019653615.1	GCA_019653615.1_01656	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP077098.1	1689511	1690263
GCA_019653615.1	GCA_019653615.1_01837	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP077098.1	1891540	1892832
GCA_019653615.1	GCA_019653615.1_01886	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP077098.1	1934466	1935182
GCA_019653615.1	GCA_019653615.1_01889	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP077098.1	1936957	1937679
GCA_019653615.1	GCA_019653615.1_01890	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP077098.1	1937804	1938511
GCA_019653615.1	GCA_019653615.1_01900	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP077098.1	1950160	1951143
GCA_019653615.1	GCA_019653615.1_01901	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP077098.1	1951145	1952080
GCA_019653615.1	GCA_019653615.1_02123	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP077098.1	2122923	2123273
GCA_019653615.1	GCA_019653615.1_02127	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	CP077098.1	2124769	2125260
GCA_019653615.1	GCA_019653615.1_02131	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP077098.1	2126969	2127742
GCA_019653615.1	GCA_019653615.1_02233	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP077098.1	2197691	2197825
GCA_019653615.1	GCA_019653615.1_02379	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	96.67	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP077098.1	2349094	2350536
GCA_019653615.1	GCA_019653615.1_02641	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP077098.1	2586487	2587452
GCA_019653615.1	GCA_019653615.1_02642	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	98.41	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP077098.1	2588020	2588967
GCA_019653615.1	GCA_019653615.1_02643	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	99.69	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP077098.1	2588969	2589946
GCA_019653615.1	GCA_019653615.1_02855	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.52	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP077098.1	2816652	2818181
GCA_019653615.1	GCA_019653615.1_02890	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	98.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP077098.1	2863583	2864635
GCA_019653615.1	GCA_019653615.1_02908	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.30	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP077098.1	2881284	2884835
GCA_919946725.1	GCA_919946725.1_01559	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	OV040584.1	1563685	1565079
GCA_028326465.1	GCA_028326465.1_00013	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMMU010000010.1	10819	12738
GCA_028326465.1	GCA_028326465.1_01723	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMMU010000007.1	5401	6132
GCA_025558605.1	GCA_025558605.1_00026	fusC	FusC family fusidic acid resistance EF-G-binding protein	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	BLASTP	212	212	100.00	99.53	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	CP094724.1	29638	30276
GCA_025558605.1	GCA_025558605.1_00061	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094724.1	61833	63122
GCA_025558605.1	GCA_025558605.1_00064	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP094724.1	65301	65648
GCA_017299035.1	GCA_017299035.1_01054	smdA	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	591	591	100.00	98.48	591	BAF79679.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	NA	NA	CP071226.1	1099705	1101480
GCA_017299035.1	GCA_017299035.1_01055	smdB	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	592	592	100.00	98.65	592	BAF79680.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	NA	NA	CP071226.1	1101473	1103251
GCA_017299035.1	GCA_017299035.1_01070	sdeY	multidrug efflux RND transporter permease subunit SdeY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1048	1051	99.43	95.70	1046	BAC77251.1	multidrug efflux RND transporter permease subunit SdeY	NA	NA	CP071226.1	1112541	1115687
GCA_017299035.1	GCA_017299035.1_01956	sdeB	multidrug efflux RND transporter permease subunit SdeB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1047	1047	100.00	99.62	1047	AAO18187.2	multidrug efflux RND transporter permease subunit SdeB	NA	NA	CP071226.1	2018182	2021325
GCA_017299035.1	GCA_017299035.1_01957	sdeA	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	395	395	100.00	99.75	395	AAS55383.1	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	CP071226.1	2021350	2022537
GCA_017299035.1	GCA_017299035.1_02296	blaSRT	SRT/SST family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	378	378	100.00	99.47	378	WP_063864750.1	cephalosporin-hydrolyzing class C beta-lactamase SST-1	NF000423.2	SRT/SST family class C beta-lactamase	CP071226.1	2345851	2346987
GCA_017299035.1	GCA_017299035.1_02529	tet(41)	tetracycline efflux MFS transporter Tet(41)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	388	393	98.73	95.62	388	WP_063855881.1	tetracycline efflux MFS transporter Tet(41)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP071226.1	2615298	2616464
GCA_017299035.1	GCA_017299035.1_02613	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	91	102	90.20	71.58	95	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP071226.1	2705533	2705808
GCA_017299035.1	GCA_017299035.1_02627	ssmE	multidrug efflux SMR transporter SsmE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	106	110	96.36	100.00	106	BAF80121.1	multidrug efflux SMR transporter SsmE	NA	NA	CP071226.1	2720936	2721256
GCA_017299035.1	GCA_017299035.1_02729	smfY	multidrug efflux MFS transporter SmfY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	490	490	100.00	98.37	490	BAE79899.1	multidrug efflux MFS transporter SmfY	NA	NA	CP071226.1	2836722	2838194
GCA_017299035.1	GCA_017299035.1_02876	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	139	98.56	67.15	137	WP_004857515.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP071226.1	2978288	2978695
GCA_017299035.1	GCA_017299035.1_04304	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	146	146	100.00	100.00	146	WP_033639326.1	aminoglycoside 6-N-acetyltransferase	NF000021.4	aminoglycoside 6-N-acetyltransferase	CP071226.1	4464265	4464705
GCA_017299035.1	GCA_017299035.1_04800	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	81.27	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP071226.1	4987057	4987959
GCA_002556585.1	GCA_002556585.1_00858	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP023814.1	865626	867005
GCA_002556585.1	GCA_002556585.1_01595	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP023814.1	1626666	1627571
GCA_002556585.1	GCA_002556585.1_01720	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP023814.1	1763550	1764788
GCA_002556585.1	GCA_002556585.1_01721	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP023814.1	1765192	1765824
GCA_002556585.1	GCA_002556585.1_01723	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP023814.1	1766649	1768217
GCA_002556585.1	GCA_002556585.1_01985	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	508	99.61	97.83	506	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP023814.1	2024812	2026335
GCA_900636255.1	GCA_900636255.1_00429	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR134242.1	470455	471747
GCA_018127845.1	GCA_018127845.1_01041	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	EXACTP	266	266	100.00	100.00	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP072335.1	1199603	1200403
GCA_030435975.1	GCA_030435975.1_00059	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP129372.1	67719	69011
GCA_030435975.1	GCA_030435975.1_00063	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP129372.1	72694	73041
GCA_030435975.1	GCA_030435975.1_00140	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	93.66	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP129372.1	167183	167611
GCA_030435975.1	GCA_030435975.1_00854	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP129372.1	916121	916966
GCA_030435975.1	GCA_030435975.1_00855	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.06	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP129372.1	917073	918830
GCA_030435975.1	GCA_030435975.1_00856	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP129372.1	918820	919200
GCA_030435975.1	GCA_030435975.1_01945	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	97.08	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	CP129372.1	2017933	2018655
GCA_030435975.1	GCA_030435975.1_02195	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.44	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP129372.1	2260392	2261684
GCA_030435975.1	GCA_030435975.1_02434	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP129373.1	7126	8592
GCA_030435975.1	GCA_030435975.1_02437	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP129373.1	10393	10773
GCA_030435975.1	GCA_030435975.1_02438	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP129373.1	10763	12520
GCA_030435975.1	GCA_030435975.1_02439	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP129373.1	12627	13472
GCA_030435975.1	GCA_030435975.1_02443	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP129373.1	15575	16216
GCA_030435975.1	GCA_030435975.1_02457	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	1024	1024	100.00	99.90	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP129373.1	26504	29578
GCA_001697805.1	GCA_001697805.1_00746	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016669.1	759116	760495
GCA_001697805.1	GCA_001697805.1_01457	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016669.1	1502107	1503012
GCA_001697805.1	GCA_001697805.1_01582	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016669.1	1636933	1638171
GCA_001697805.1	GCA_001697805.1_01583	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016669.1	1638579	1639211
GCA_001697805.1	GCA_001697805.1_01585	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016669.1	1640036	1641604
GCA_001697805.1	GCA_001697805.1_01785	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016669.1	1851164	1852690
GCA_003625785.1	GCA_003625785.1_00836	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHX01000003.1	112459	113400
GCA_022069485.1	GCA_022069485.1_01199	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035246.1	1162548	1163747
GCA_003939335.2	GCA_003939335.2_02032	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	120	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP078018.1	2104195	2104557
GCA_003939335.2	GCA_003939335.2_02033	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	95.37	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP078018.1	2104574	2106259
GCA_003939335.2	GCA_003939335.2_02034	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	79.43	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP078018.1	2106298	2106723
GCA_003939335.2	GCA_003939335.2_02036	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	92.36	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP078018.1	2107462	2107896
GCA_003939335.2	GCA_003939335.2_02312	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	98.74	79.08	392	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP078018.1	2348441	2349634
GCA_003939335.2	GCA_003939335.2_03318	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	409	392	100.00	74.37	394	WP_430673475.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP078018.1	3350513	3351742
GCA_003939335.2	GCA_003939335.2_03407	dfrA44	trimethoprim-resistant dihydrofolate reductase DfrA44	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	176	170	100.00	100.00	170	WP_031380727.1	trimethoprim-resistant dihydrofolate reductase DfrA44	NA	NA	CP078019.1	4665	5195
GCA_003939335.2	GCA_003939335.2_03501	tet(X3)	tetracycline-inactivating monooxygenase Tet(X3)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	388	388	100.00	100.00	388	WP_024160783.1	tetracycline-inactivating monooxygenase Tet(X3)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	CP078019.1	118748	119914
GCA_003939335.2	GCA_003939335.2_03506	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP078019.1	123290	124105
GCA_003939335.2	GCA_003939335.2_03548	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	267	100.00	99.63	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP078019.1	170821	171624
GCA_003939335.2	GCA_003939335.2_03549	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.28	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP078019.1	171624	172460
GCA_003939335.2	GCA_003939335.2_03560	msr(E)	ABC-F type ribosomal protection protein Msr(E)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN	EXACTP	491	491	100.00	100.00	491	WP_000052512.1	ABC-F type ribosomal protection protein Msr(E)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP078019.1	177584	179059
GCA_003939335.2	GCA_003939335.2_03561	mph(E)	Mph(E) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EXACTP	294	294	100.00	100.00	294	WP_000155092.1	Mph(E) family macrolide 2-phosphotransferase	NF012158.1	Mph(E) family macrolide 2-phosphotransferase	CP078019.1	179115	179999
GCA_003939335.2	GCA_003939335.2_03600	blaNDM-1	subclass B1 metallo-beta-lactamase NDM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	270	270	100.00	100.00	270	WP_004201164.1	subclass B1 metallo-beta-lactamase NDM-1	NF000259.2	NDM family subclass B1 metallo-beta-lactamase	CP078019.1	205110	205922
GCA_003939335.2	GCA_003939335.2_03605	arr-3	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	EXACTP	150	150	100.00	100.00	150	WP_001749986.1	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP078019.1	208060	208512
GCA_003939335.2	GCA_003939335.2_03606	aac(6)-Ib	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	BLASTP	172	184	93.48	100.00	172	WP_003159191.1	aminoglycoside N-acetyltransferase AAC(6)-Ib4	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP078019.1	208687	209205
GCA_003939335.2	GCA_003939335.2_03607	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP078019.1	209374	209721
GCA_003939335.2	GCA_003939335.2_03608	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP078019.1	209715	210554
GCA_003939335.2	GCA_003939335.2_03622	aph(3)-VIa	aminoglycoside O-phosphotransferase APH(3)-VIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	259	259	100.00	100.00	259	WP_000422636.1	aminoglycoside O-phosphotransferase APH(3)-VIa	NF033062.0	APH(3)-VI family aminoglycoside O-phosphotransferase	CP078019.1	220359	221138
GCA_003939335.2	GCA_003939335.2_03713	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP078019.1	303412	303867
GCA_003939335.2	GCA_003939335.2_03715	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	79.43	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP078019.1	304606	305031
GCA_003939335.2	GCA_003939335.2_03716	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	97.50	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP078019.1	305070	306755
GCA_003939335.2	GCA_003939335.2_03717	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	128	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP078019.1	306752	307138
GCA_003939335.2	GCA_003939335.2_03726	mph(E)	Mph(E) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EXACTP	294	294	100.00	100.00	294	WP_000155092.1	Mph(E) family macrolide 2-phosphotransferase	NF012158.1	Mph(E) family macrolide 2-phosphotransferase	CP078019.1	315746	316630
GCA_003939335.2	GCA_003939335.2_03727	msr(E)	ABC-F type ribosomal protection protein Msr(E)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN	EXACTP	491	491	100.00	100.00	491	WP_000052512.1	ABC-F type ribosomal protection protein Msr(E)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP078019.1	316686	318161
GCA_003939335.2	GCA_003939335.2_03738	blaOXA	OXA-58 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	257	280	91.79	100.00	257	WP_002002480.1	carbapenem-hydrolyzing class D beta-lactamase OXA-58	NF012161.0	class D beta-lactamase	CP078019.1	324590	325363
GCA_030175965.1	GCA_030175965.1_00930	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUZ010000002.1	119460	120314
GCA_015556095.1	GCA_015556095.1_00734	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADNLT010000001.1	443486	444703
GCA_015556095.1	GCA_015556095.1_00735	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADNLT010000001.1	444823	446286
GCA_015556095.1	GCA_015556095.1_01745	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.74	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JADNLT010000005.1	156481	158205
GCA_015556095.1	GCA_015556095.1_01746	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.32	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JADNLT010000005.1	158207	159943
GCA_016535385.1	GCA_016535385.1_01505	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JAEKFY010000002.1	51669	53063
GCA_016535385.1	GCA_016535385.1_01816	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JAEKFY010000002.1	380860	381720
GCA_009717435.1	GCA_009717435.1_00540	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMYO01000001.1	221442	222905
GCA_009717435.1	GCA_009717435.1_00541	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMYO01000001.1	223025	224242
GCA_024105125.1	GCA_024105125.1_01011	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDUE010000023.1	1763	2173
GCA_024105125.1	GCA_024105125.1_02071	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAHDUE010000006.1	40661	41515
GCA_001062425.1	GCA_001062425.1_01101	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	75.54	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVXS01000107.1	7781	9421
GCA_022569075.1	GCA_022569075.1_00974	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKM010000001.1	958638	959057
GCA_022569075.1	GCA_022569075.1_01413	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKM010000002.1	146293	147366
GCA_022569075.1	GCA_022569075.1_01564	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKM010000002.1	307223	308515
GCA_003856455.1	GCA_003856455.1_00691	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP034115.1	677477	679483
GCA_003856455.1	GCA_003856455.1_00787	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP034115.1	776163	777452
GCA_003856455.1	GCA_003856455.1_00790	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP034115.1	779630	779977
GCA_003856455.1	GCA_003856455.1_00864	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	98.59	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP034115.1	863089	863517
GCA_003856455.1	GCA_003856455.1_00916	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP034115.1	922713	923780
GCA_003856455.1	GCA_003856455.1_01572	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP034115.1	1588470	1589111
GCA_003856455.1	GCA_003856455.1_01595	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP034115.1	1609594	1610439
GCA_003856455.1	GCA_003856455.1_01596	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP034115.1	1610546	1612303
GCA_003856455.1	GCA_003856455.1_01597	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP034115.1	1612293	1612673
GCA_003856455.1	GCA_003856455.1_02486	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP034116.1	13770	16844
GCA_003856455.1	GCA_003856455.1_02491	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	CP034116.1	19504	19827
GCA_900637065.1	GCA_900637065.1_02088	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LR134339.1	2204113	2205537
GCA_001808955.1	GCA_001808955.1_00223	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	639	92.80	98.82	593	WP_050618045.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV795239.1	494	2281
GCA_001808955.1	GCA_001808955.1_01402	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV795256.1	371877	373535
GCA_023109975.1	GCA_023109975.1_01355	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALDVE010000002.1	342488	344407
GCA_003397635.1	GCA_003397635.1_00490	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	QJUW01000001.1	558187	559665
GCA_003942765.1	GCA_003942765.1_00028	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJNW01000001.1	26249	27466
GCA_003942765.1	GCA_003942765.1_00029	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJNW01000001.1	27586	29049
GCA_003942765.1	GCA_003942765.1_00219	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.99	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RJNW01000001.1	231863	233062
GCA_003942765.1	GCA_003942765.1_01443	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	RJNW01000004.1	133714	135609
GCA_024790365.1	GCA_024790365.1_02010	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	628	641	97.82	99.84	627	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUTO010000001.1	1963776	1965662
GCA_024790365.1	GCA_024790365.1_04201	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	298	300	72.00	53.70	216	WP_032579291.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JANUTO010000002.1	350229	351125
GCA_024790365.1	GCA_024790365.1_05317	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	42.72	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANUTO010000002.1	1413910	1414236
GCA_003798405.1	GCA_003798405.1_00220	yfeD	iron/manganese ABC transporter permease subunit YfeD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	297	100.00	99.66	297	AAC46150.1	iron/manganese ABC transporter permease subunit YfeD	NA	NA	CP033711.1	241367	242260
GCA_003798405.1	GCA_003798405.1_00222	yfeB	iron/manganese ABC transporter ATP-binding protein YfeB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	296	296	100.00	100.00	296	AAC46148.1	iron/manganese ABC transporter ATP-binding protein YfeB	NA	NA	CP033711.1	243141	244031
GCA_003798405.1	GCA_003798405.1_00223	yfeA	iron/manganese ABC transporter substrate-binding protein YfeA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	322	322	100.00	100.00	322	AAC46147.1	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	CP033711.1	244028	244996
GCA_003798405.1	GCA_003798405.1_00428	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	104	102	97.06	48.28	116	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP033711.1	423522	423836
GCA_003798405.1	GCA_003798405.1_01038	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	600	600	100.00	100.00	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP033711.1	1054009	1055811
GCA_003798405.1	GCA_003798405.1_01039	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.67	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP033711.1	1055798	1057600
GCA_003798405.1	GCA_003798405.1_01733	ymoA	expression modulating protein YmoA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	67	67	100.00	100.00	67	AAQ90017.1	expression modulating protein YmoA	NA	NA	CP033711.1	1823145	1823348
GCA_003798405.1	GCA_003798405.1_03988	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	121	102	100.00	53.28	122	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP033711.1	4290397	4290762
GCA_003798405.1	GCA_003798405.1_04438	yopD	type III secretion system translocon subunit YopD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	306	100.00	97.71	306	AAK69210.1	type III secretion system translocon subunit YopD	NA	NA	CP033710.1	5422	6342
GCA_003798405.1	GCA_003798405.1_04439	yopB	type III secretion system translocon subunit YopB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	401	401	100.00	96.51	401	AAK69211.1	type III secretion system translocon subunit YopB	NA	NA	CP033710.1	6361	7566
GCA_003798405.1	GCA_003798405.1_04441	lcrV	type III secretion system needle tip protein LcrV	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	326	329	99.70	95.43	328	CNC59088.1	type III secretion system needle tip protein LcrV	NA	NA	CP033710.1	8063	9043
GCA_003798405.1	GCA_003798405.1_04460	virF	virulence regulon transcriptional activator VirF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	271	271	100.00	97.79	271	AAD16833.1	virulence regulon transcriptional activator VirF	NA	NA	CP033710.1	22240	23055
GCA_003798405.1	GCA_003798405.1_04474	yopH	T3SS effector protein-tyrosine-phosphatase YopH	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	468	468	100.00	98.50	468	AJJ21453.1	T3SS effector protein-tyrosine-phosphatase YopH	NA	NA	CP033710.1	33237	34643
GCA_003798405.1	GCA_003798405.1_04476	yopJ	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	288	288	100.00	100.00	288	AKN09807.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	NF040632.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	CP033710.1	36146	37012
GCA_003798405.1	GCA_003798405.1_04477	yopO	type III secretion system effector protein kinase YopO/YpkA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	729	100.00	97.39	729	CFQ25321.1	type III secretion system effector protein kinase YopO/YpkA	NA	NA	CP033710.1	37408	39606
GCA_003798405.1	GCA_003798405.1_04489	yadA	trimeric autotransporter adhesin YadA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	432	487	100.00	77.80	491	CNC65351.1	trimeric autotransporter adhesin YadA	NF033478.1	trimeric autotransporter adhesin YadA	CP033710.1	46499	47797
GCA_003798405.1	GCA_003798405.1_04503	yopE	type III secretion system effector GTPase activator YopE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	219	219	100.00	94.06	219	AJJ21471.1	type III secretion system effector GTPase activator YopE	NA	NA	CP033710.1	57685	58344
GCA_003798405.1	GCA_003798405.1_04515	yopT	T3SS effector cysteine protease YopT	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	322	322	100.00	92.55	322	AJJ21466.1	T3SS effector cysteine protease YopT	NA	NA	CP033710.1	66876	67844
GCA_963394855.1	GCA_963394855.1_00089	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPE010000001.1	80812	82338
GCA_963394855.1	GCA_963394855.1_01088	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPE010000008.1	79942	81180
GCA_963394855.1	GCA_963394855.1_01089	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJPE010000008.1	81197	82060
GCA_963394855.1	GCA_963394855.1_01202	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPE010000009.1	77746	79125
GCA_963394855.1	GCA_963394855.1_01343	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJPE010000011.1	18589	19494
GCA_023277465.1	GCA_023277465.1_00543	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP080457.1	539886	540266
GCA_023277465.1	GCA_023277465.1_00544	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.21	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP080457.1	540256	542013
GCA_023277465.1	GCA_023277465.1_00545	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP080457.1	542120	542965
GCA_023277465.1	GCA_023277465.1_00768	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP080457.1	774011	774358
GCA_023277465.1	GCA_023277465.1_00772	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP080457.1	778041	779333
GCA_900176625.1	GCA_900176625.1_00040	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	207	207	100.00	81.64	207	WP_002570989.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	LT838825.1	2280	2903
GCA_900176625.1	GCA_900176625.1_00124	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LT838833.1	8405	10324
GCA_001807785.1	GCA_001807785.1_00478	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KV790965.1	151770	152198
GCA_001588905.1	GCA_001588905.1_00449	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.28	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LAWH01000019.1	41968	43887
GCA_022689225.1	GCA_022689225.1_00097	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXR010000011.1	14427	15500
GCA_022689225.1	GCA_022689225.1_00545	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCXR010000017.1	40834	41214
GCA_022689225.1	GCA_022689225.1_00546	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCXR010000017.1	41204	42961
GCA_022689225.1	GCA_022689225.1_00547	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCXR010000017.1	43068	43913
GCA_022689225.1	GCA_022689225.1_00996	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXR010000001.1	361410	361829
GCA_022689225.1	GCA_022689225.1_01424	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXR010000002.1	140755	142047
GCA_022485285.1	GCA_022485285.1_00120	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVEH010000012.1	98500	99792
GCA_022485285.1	GCA_022485285.1_01358	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JAKVEH010000019.1	48625	49266
GCA_022485285.1	GCA_022485285.1_02158	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	BLASTP	299	299	100.00	99.67	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAKVEH010000030.1	6067	6966
GCA_022485285.1	GCA_022485285.1_02159	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.59	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKVEH010000030.1	7065	8531
GCA_022485285.1	GCA_022485285.1_02236	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKVEH010000033.1	7235	7615
GCA_022485285.1	GCA_022485285.1_02237	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKVEH010000033.1	7605	9362
GCA_022485285.1	GCA_022485285.1_02238	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKVEH010000033.1	9469	10314
GCA_022485285.1	GCA_022485285.1_02244	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	445	479	92.48	99.10	443	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAKVEH010000033.1	15346	16683
GCA_022485285.1	GCA_022485285.1_02406	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_001829870.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAKVEH010000008.1	517	1002
GCA_007559235.1	GCA_007559235.1_00824	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	VMHH01000016.1	515	1318
GCA_007559235.1	GCA_007559235.1_00825	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	VMHH01000016.1	1318	2154
GCA_007559235.1	GCA_007559235.1_00826	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VMHH01000016.1	2358	3533
GCA_007559235.1	GCA_007559235.1_01147	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VMHH01000002.1	278557	279411
GCA_007559235.1	GCA_007559235.1_01486	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	97.86	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	VMHH01000003.1	198286	199827
GCA_011714895.1	GCA_011714895.1_00461	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.49	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXT01000019.1	20004	21425
GCA_011714895.1	GCA_011714895.1_01013	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RXXT01000002.1	27141	29060
GCA_011714895.1	GCA_011714895.1_01050	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RXXT01000002.1	59927	61390
GCA_011714895.1	GCA_011714895.1_01051	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RXXT01000002.1	61411	62628
GCA_000014365.2	GCA_000014365.2_00913	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP000410.2	873742	874941
GCA_023110175.1	GCA_023110175.1_00445	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JALDVN010000015.1	25171	26907
GCA_023110175.1	GCA_023110175.1_00446	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.39	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JALDVN010000015.1	26909	28633
GCA_023110175.1	GCA_023110175.1_01313	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JALDVN010000002.1	181347	183266
GCA_023110175.1	GCA_023110175.1_01496	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDVN010000003.1	139899	141362
GCA_023110175.1	GCA_023110175.1_01497	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDVN010000003.1	141482	142699
GCA_024295545.1	GCA_024295545.1_00210	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPH010000001.1	205638	206855
GCA_024295545.1	GCA_024295545.1_00211	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPH010000001.1	206975	208438
GCA_024295545.1	GCA_024295545.1_00216	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPH010000001.1	210179	210607
GCA_024295545.1	GCA_024295545.1_01065	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCPH010000003.1	158289	160013
GCA_024295545.1	GCA_024295545.1_01066	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCPH010000003.1	160015	161751
GCA_024295545.1	GCA_024295545.1_01347	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCPH010000004.1	180663	182582
GCA_024295545.1	GCA_024295545.1_01617	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCPH010000005.1	222671	224566
GCA_016791525.1	GCA_016791525.1_02516	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	62	25	100.00	92.00	25	AAC21574.1	delta-hemolysin	NA	NA	JAENGW010000004.1	82531	82719
GCA_017347365.1	GCA_017347365.1_00630	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.80	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	AP024489.1	646029	647555
GCA_017347365.1	GCA_017347365.1_00819	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	AP024489.1	849625	851193
GCA_017347365.1	GCA_017347365.1_00821	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	AP024489.1	851832	852464
GCA_017347365.1	GCA_017347365.1_00822	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.79	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	AP024489.1	852868	854106
GCA_017347365.1	GCA_017347365.1_01648	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	AP024489.1	1733838	1735217
GCA_001895805.1	GCA_001895805.1_00276	aac(2)-Ic	aminoglycoside N-acetyltransferase AAC(2)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	181	181	100.00	100.00	181	WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	NF000034.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	CP018302.1	314420	314965
GCA_001895805.1	GCA_001895805.1_02078	erm(37)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	150	179	83.80	99.33	150	WP_003900446.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	NA	NA	CP018302.1	2222038	2222490
GCA_001895805.1	GCA_001895805.1_02162	blaC	class A beta-lactamase BlaC	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	307	307	100.00	100.00	307	WP_003410677.1	class A beta-lactamase BlaC	NF041154.1	class A beta-lactamase BlaC	CP018302.1	2317509	2318432
GCA_000158015.1	GCA_000158015.1_00018	tet(C)	tetracycline efflux MFS transporter Tet(C)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	261	396	65.91	100.00	261	WP_001297013.1	tetracycline efflux MFS transporter Tet(C)	NA	NA	GG729832.1	82	867
GCA_029691405.1	GCA_029691405.1_01663	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP121467.1	1672487	1674406
GCA_029691405.1	GCA_029691405.1_01674	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP121467.1	1684324	1685061
GCA_901543815.1	GCA_901543815.1_00807	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	90.73	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CABEIU010000002.1	790600	791799
GCA_013004615.1	GCA_013004615.1_00229	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.47	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	JABEMD010000001.1	227871	230720
GCA_013004615.1	GCA_013004615.1_00352	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	561	100.00	83.63	562	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JABEMD010000010.1	8895	10583
GCA_013004615.1	GCA_013004615.1_00354	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	93	91	100.00	80.65	93	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JABEMD010000010.1	11069	11350
GCA_013004615.1	GCA_013004615.1_00356	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	HMM	141	144	93.75	87.41	135	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	JABEMD010000010.1	11786	12211
GCA_013004615.1	GCA_013004615.1_01083	aac(3)-IV	AAC(3)-IV family aminoglycoside N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	262	265	96.98	82.10	257	WP_149317372.1	AAC(3)-IV family aminoglycoside N-acetyltransferase	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	JABEMD010000015.1	69624	70412
GCA_013004615.1	GCA_013004615.1_01275	blaOXA	OXA-837 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	301	100.00	82.62	305	WP_148281568.1	OXA-837 family class D beta-lactamase	NF042983.1	OXA-837 family class D beta-lactamase	JABEMD010000017.1	40463	41380
GCA_013004615.1	GCA_013004615.1_01865	mcr-5.1	phosphoethanolamine--lipid A transferase MCR-5.1	core	AMR	AMR	COLISTIN	COLISTIN	ALLELEP	547	547	100.00	100.00	547	WP_053821788.1	phosphoethanolamine--lipid A transferase MCR-5.1	NF033463.1	MCR-5 family phosphoethanolamine--lipid A transferase	JABEMD010000022.1	47315	48958
GCA_013004615.1	GCA_013004615.1_01870	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	90	91	100.00	82.42	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JABEMD010000022.1	53135	53407
GCA_013004615.1	GCA_013004615.1_01871	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	139	141	100.00	70.92	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	JABEMD010000022.1	53436	53855
GCA_013004615.1	GCA_013004615.1_01872	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	561	561	100.00	82.17	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JABEMD010000022.1	53896	55581
GCA_013004615.1	GCA_013004615.1_02858	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	400	390	96.15	47.34	376	WP_063857697.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	JABEMD010000034.1	30489	31691
GCA_013277295.1	GCA_013277295.1_01041	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.49	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMMQ01000042.1	22607	24028
GCA_006546825.1	GCA_006546825.1_00544	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.10	46.40	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VICC01000001.1	647045	648469
GCA_002884815.1	GCA_002884815.1_00003	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.43	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	PNGX01000001.1	1555	3033
GCA_002884815.1	GCA_002884815.1_00255	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_063856111.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	PNGX01000001.1	266144	268063
GCA_002884815.1	GCA_002884815.1_01230	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.43	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	PNGX01000002.1	650228	651706
GCA_016725285.1	GCA_016725285.1_01272	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP068219.1	1239958	1240377
GCA_016725285.1	GCA_016725285.1_01899	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	98.86	53.31	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP068219.1	1853615	1854682
GCA_016725285.1	GCA_016725285.1_02248	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.55	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP068219.1	2237890	2239182
GCA_016725285.1	GCA_016725285.1_02551	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP068220.1	807	2096
GCA_016725285.1	GCA_016725285.1_02603	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	96.97	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP068220.1	50064	51353
GCA_016725285.1	GCA_016725285.1_02604	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	129	131	85.50	97.32	112	AAA27589.1	thioredoxin-dependent arsenate reductase	NA	NA	CP068220.1	51425	51814
GCA_009379215.1	GCA_009379215.1_01271	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXDC01000032.1	110717	111658
GCA_000223255.2	GCA_000223255.2_02218	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AFUT01000001.1	504762	505190
GCA_022346865.1	GCA_022346865.1_02057	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	43.38	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKREI010000005.1	104871	105281
GCA_000759555.1	GCA_000759555.1_01285	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	97.18	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP009046.1	1309779	1310207
GCA_000759555.1	GCA_000759555.1_01369	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP009046.1	1401529	1401876
GCA_000759555.1	GCA_000759555.1_01373	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP009046.1	1405559	1406851
GCA_900635805.1	GCA_900635805.1_00643	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089068.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	LR134171.1	626006	627211
GCA_900635805.1	GCA_900635805.1_01285	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LR134171.1	1275871	1277265
GCA_013267575.1	GCA_013267575.1_01951	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP054006.1	1892936	1893283
GCA_013267575.1	GCA_013267575.1_01954	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.38	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP054006.1	1895449	1896738
GCA_013267575.1	GCA_013267575.1_02257	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	1024	1024	100.00	99.90	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP054007.1	10879	13953
GCA_013267575.1	GCA_013267575.1_02261	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP054007.1	16693	17253
GCA_013267575.1	GCA_013267575.1_02262	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP054007.1	17437	18981
GCA_013267575.1	GCA_013267575.1_02299	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	PARTIALP	334	522	63.98	99.70	334	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NA	NA	CP054009.1	4747	5751
GCA_003992085.1	GCA_003992085.1_00238	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	261	245	100.00	99.59	245	WP_011861426.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RQVC01000002.1	59542	60327
GCA_003992085.1	GCA_003992085.1_00239	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	RQVC01000002.1	60665	61207
GCA_003992085.1	GCA_003992085.1_00240	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	RQVC01000002.1	61300	62094
GCA_003992085.1	GCA_003992085.1_00243	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RQVC01000002.1	63770	64507
GCA_003992085.1	GCA_003992085.1_00253	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RQVC01000002.1	74422	76341
GCA_000195005.1	GCA_000195005.1_01775	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.35	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	GL878528.1	82273	83667
GCA_001679445.1	GCA_001679445.1_00660	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	94.61	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LZOY01000007.1	244015	245409
GCA_024968205.1	GCA_024968205.1_00808	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_007929940.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP103885.1	814685	815536
GCA_024968205.1	GCA_024968205.1_00877	spaB	SpaA fimbrial minor subunit SpaB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	205	205	100.00	100.00	205	CAE50542.1	SpaA fimbrial minor subunit SpaB	NA	NA	CP103885.1	880395	881012
GCA_024968205.1	GCA_024968205.1_00878	srtA	class C sortase SrtA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	289	289	100.00	100.00	289	CAE50543.1	class C sortase SrtA	NA	NA	CP103885.1	881002	881871
GCA_024968205.1	GCA_024968205.1_00879	spaA	SpaA fimbrial major subunit SpaA	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	267	525	50.86	99.63	267	CAE50544.1	SpaA fimbrial major subunit SpaA	NA	NA	CP103885.1	881872	882675
GCA_024968205.1	GCA_024968205.1_00953	cbpA	type I collagen-binding adhesin CbpA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1225	951	90.22	99.88	858	CAE50621.1	type I collagen-binding adhesin CbpA	NA	NA	CP103885.1	956874	960551
GCA_024968205.1	GCA_024968205.1_01092	spaI	SpaH fimbrial minor subunit SpaI	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	215	269	73.23	97.46	197	CAE50750.1	SpaH fimbrial minor subunit SpaI	NA	NA	CP103885.1	1126891	1127538
GCA_024968205.1	GCA_024968205.1_01093	srtE	SpaH fimbrial biogenesis class C sortase SrtE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	335	348	96.26	99.70	335	CAE50751.1	SpaH fimbrial biogenesis class C sortase SrtE	NA	NA	CP103885.1	1127611	1128618
GCA_024968205.1	GCA_024968205.1_01094	srtD	SpaH fimbrial biogenesis class C sortase SrtD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	318	318	100.00	100.00	318	CAE50752.1	SpaH fimbrial biogenesis class C sortase SrtD	NA	NA	CP103885.1	1128641	1129597
GCA_024968205.1	GCA_024968205.1_01095	spaH	SpaH fimbrial major subunit SpaH	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	555	555	100.00	100.00	555	CAE50753.1	SpaH fimbrial major subunit SpaH	NA	NA	CP103885.1	1129787	1131454
GCA_024968205.1	GCA_024968205.1_01097	spaG	SpaH fimbrial tip protein SpaG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1114	1375	80.58	100.00	1108	CAE50754.1	SpaH fimbrial tip protein SpaG	NA	NA	CP103885.1	1132342	1135686
GCA_024968205.1	GCA_024968205.1_01447	spaD	SpaD fimbrial major subunit SpaD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	490	490	100.00	100.00	490	CAE48740.1	SpaD fimbrial major subunit SpaD	NA	NA	CP103885.1	1466314	1467786
GCA_024968205.1	GCA_024968205.1_01448	srtC	class C sortase SrtC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	CAE48741.1	class C sortase SrtC	NA	NA	CP103885.1	1467887	1468825
GCA_024968205.1	GCA_024968205.1_01449	spaE	SpaD fimbrial minor subunit SpaE	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	226	263	65.40	100.00	172	CAE48742.1	SpaD fimbrial minor subunit SpaE	NA	NA	CP103885.1	1468797	1469477
GCA_024968205.1	GCA_024968205.1_01450	spaF	SpaD fimbrial tip protein SpaF	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1039	1039	100.00	100.00	1039	CAE48743.1	SpaD fimbrial tip protein SpaF	NA	NA	CP103885.1	1469616	1472735
GCA_024968205.1	GCA_024968205.1_01768	nanH	exo-alpha-sialidase NanH	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	376	721	51.73	99.20	373	ARB89035.1	exo-alpha-sialidase NanH	NA	NA	CP103885.1	1781028	1782158
GCA_001588725.1	GCA_001588725.1_00306	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.84	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	LAWO01000014.1	10078	11814
GCA_001588725.1	GCA_001588725.1_00307	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.39	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	LAWO01000014.1	11816	13540
GCA_001697265.1	GCA_001697265.1_00101	mphK	macrolide 2-phosphotransferase MphK	core	AMR	AMR	MACROLIDE	TELITHROMYCIN/TYLOSIN	EXACTP	306	306	100.00	100.00	306	WP_003246254.1	macrolide 2-phosphotransferase MphK	NA	NA	CP015375.1	119738	120658
GCA_001697265.1	GCA_001697265.1_00143	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	267	268	99.63	62.59	270	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP015375.1	167144	167947
GCA_001697265.1	GCA_001697265.1_00433	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_003242953.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP015375.1	423053	424429
GCA_001697265.1	GCA_001697265.1_00436	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	173	173	100.00	100.00	173	WP_003242546.1	streptothricin N-acetyltransferase SatA	NA	NA	CP015375.1	426429	426950
GCA_001697265.1	GCA_001697265.1_01926	aadK	aminoglycoside 6-adenylyltransferase AadK	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	284	284	100.00	100.00	284	WP_003229862.1	aminoglycoside 6-adenylyltransferase AadK	NF000312.1	aminoglycoside 6-adenylyltransferase AadK	CP015375.1	1875601	1876455
GCA_001697265.1	GCA_001697265.1_02027	acr3	arsenite efflux transporter Acr3	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	346	346	100.00	100.00	346	CAB14520.2	arsenite efflux transporter Acr3	NA	NA	CP015375.1	1955345	1956385
GCA_001697265.1	GCA_001697265.1_02028	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	139	139	100.00	100.00	139	CAB14519.1	thioredoxin-dependent arsenate reductase	NA	NA	CP015375.1	1956397	1956816
GCA_001697265.1	GCA_001697265.1_02769	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	309	98.06	66.99	306	WP_011053164.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	CP015375.1	2562755	2563675
GCA_001697265.1	GCA_001697265.1_02875	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	144	140	100.00	75.00	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP015375.1	2690740	2691174
GCA_001697265.1	GCA_001697265.1_04191	vmlR	ABC-F type ribosomal protection protein VmlR	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOMYCIN/TIAMULIN/VIRGINIAMYCIN M	EXACTP	547	547	100.00	100.00	547	WP_003234144.1	ABC-F type ribosomal protection protein VmlR	NA	NA	CP015375.1	4001462	4003105
GCA_020388825.1	GCA_020388825.1_00060	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP077898.1	64562	65920
GCA_020388825.1	GCA_020388825.1_00261	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP077898.1	290631	291986
GCA_020388825.1	GCA_020388825.1_00749	sec2	staphylococcal enterotoxin type C2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	AAA26624.1	staphylococcal enterotoxin type C2	NA	NA	CP077898.1	775353	776153
GCA_020388825.1	GCA_020388825.1_00750	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	CP077898.1	776320	777042
GCA_020388825.1	GCA_020388825.1_01569	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP077898.1	1599785	1600537
GCA_020388825.1	GCA_020388825.1_01739	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.65	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP077898.1	1789958	1791250
GCA_020388825.1	GCA_020388825.1_01780	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP077898.1	1821894	1822649
GCA_020388825.1	GCA_020388825.1_01781	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	256	261	100.00	94.25	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP077898.1	1822688	1823458
GCA_020388825.1	GCA_020388825.1_01782	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.39	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP077898.1	1823612	1824340
GCA_020388825.1	GCA_020388825.1_01783	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP077898.1	1824375	1825094
GCA_020388825.1	GCA_020388825.1_01784	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP077898.1	1825375	1826139
GCA_020388825.1	GCA_020388825.1_01937	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP077898.1	1948918	1949268
GCA_020388825.1	GCA_020388825.1_01942	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP077898.1	1951482	1951973
GCA_020388825.1	GCA_020388825.1_02014	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP077898.1	2003918	2004052
GCA_020388825.1	GCA_020388825.1_02158	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	96.25	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP077898.1	2152560	2154002
GCA_020388825.1	GCA_020388825.1_02421	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP077898.1	2395723	2396688
GCA_020388825.1	GCA_020388825.1_02422	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP077898.1	2397256	2398203
GCA_020388825.1	GCA_020388825.1_02423	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	99.38	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP077898.1	2398205	2399182
GCA_020388825.1	GCA_020388825.1_02631	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.52	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP077898.1	2624219	2625748
GCA_020388825.1	GCA_020388825.1_02666	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP077898.1	2672585	2673637
GCA_019426365.1	GCA_019426365.1_00437	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	429	459	93.46	100.00	429	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAHLXS010000005.1	81733	83022
GCA_019426365.1	GCA_019426365.1_00443	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHLXS010000005.1	86940	88946
GCA_019426365.1	GCA_019426365.1_00481	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHLXS010000006.1	32543	32944
GCA_019426365.1	GCA_019426365.1_00482	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLXS010000006.1	32962	34254
GCA_019426365.1	GCA_019426365.1_00564	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLXS010000006.1	109043	110335
GCA_019426365.1	GCA_019426365.1_00797	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAHLXS010000008.1	1421	1963
GCA_019426365.1	GCA_019426365.1_00798	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAHLXS010000008.1	2056	2850
GCA_019426365.1	GCA_019426365.1_00839	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHLXS010000009.1	40011	40403
GCA_019426365.1	GCA_019426365.1_00840	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHLXS010000009.1	40421	41710
GCA_019426365.1	GCA_019426365.1_01634	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAHLXS010000020.1	6795	7355
GCA_019426365.1	GCA_019426365.1_01635	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAHLXS010000020.1	7539	9083
GCA_019426365.1	GCA_019426365.1_01638	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	PARTIALP	334	522	63.98	99.70	334	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NA	NA	JAHLXS010000021.1	71	1075
GCA_019426365.1	GCA_019426365.1_01643	vga(A)-LC	ABC-F type ribosomal protection protein Vga(A)-LC	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	522	522	100.00	100.00	522	WP_002449123.1	ABC-F type ribosomal protection protein Vga(A)-LC	NF000170.2	Vga family ABC-F type ribosomal protection protein	JAHLXS010000021.1	5563	7131
GCA_019426365.1	GCA_019426365.1_02155	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHLXS010000036.1	5868	6248
GCA_019426365.1	GCA_019426365.1_02156	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHLXS010000036.1	6238	7995
GCA_019426365.1	GCA_019426365.1_02157	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHLXS010000036.1	8102	8947
GCA_003985335.1	GCA_003985335.1_00334	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RYEQ01000011.1	110632	111573
GCA_029277405.1	GCA_029277405.1_01740	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	153	147	97.28	48.61	144	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP119563.1	1806303	1806764
GCA_003494655.1	GCA_003494655.1_00596	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	94.40	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQHM01000004.1	106735	108129
GCA_916619785.1	GCA_916619785.1_02043	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAKAKM010000003.1	123436	124653
GCA_916619785.1	GCA_916619785.1_02044	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAKAKM010000003.1	124773	126236
GCA_900446175.1	GCA_900446175.1_01083	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	397	396	98.48	87.95	390	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	UAQW01000006.1	75771	76964
GCA_900446175.1	GCA_900446175.1_01446	norM	multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	462	462	99.78	92.19	461	AAG27731.1	multidrug efflux MATE transporter NorM	NA	NA	UAQW01000006.1	460113	461501
GCA_900446175.1	GCA_900446175.1_02492	blaOXA	OXA-1043 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	100.00	84.76	269	WP_077021671.1	OXA-1043 family class D beta-lactamase	NF040600.1	OXA-1043 family class D beta-lactamase	UAQW01000001.1	281786	282595
GCA_900446175.1	GCA_900446175.1_02880	blaPEN-bcc	PEN family class A beta-lactamase, Bcc-type	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	312	312	100.00	100.00	312	WP_027789588.1	PEN family class A beta-lactamase, Bcc-type	NF000320.3	PEN family class A beta-lactamase, Bcc-type	UAQW01000001.1	714060	714998
GCA_900446175.1	GCA_900446175.1_03256	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	99.67	55.15	301	WP_105807557.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	UAQW01000001.1	1110860	1111759
GCA_900446175.1	GCA_900446175.1_05477	ant(3)	ANT(3)-I family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	HMM	270	262	99.62	63.98	261	WP_071846244.1	ANT(3)-I family aminoglycoside nucleotidyltransferase	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	UAQW01000008.1	272341	273153
GCA_900446175.1	GCA_900446175.1_05809	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	410	395	99.24	63.01	392	WP_031633255.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	UAQW01000008.1	636019	637251
GCA_900446175.1	GCA_900446175.1_06075	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	84.62	52.07	121	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	UAQW01000008.1	938148	938543
GCA_900446175.1	GCA_900446175.1_06921	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	389	408	92.16	56.76	377	WP_322881141.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	UAQW01000007.1	111833	113002
GCA_902850335.2	GCA_902850335.2_00700	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	OU540592.1	696337	697554
GCA_902850335.2	GCA_902850335.2_00701	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	OU540592.1	697674	699137
GCA_014874165.1	GCA_014874165.1_00021	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.76	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JADBEH010000001.1	13745	15166
GCA_014874165.1	GCA_014874165.1_00786	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	482	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JADBEH010000002.1	729652	731100
GCA_014874165.1	GCA_014874165.1_01724	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	481	631	74.01	45.93	479	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JADBEH010000002.1	1774109	1775554
GCA_019703385.1	GCA_019703385.1_01801	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018765.1	1737724	1739118
GCA_011682945.1	GCA_011682945.1_01532	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	VCPA01000028.1	10147	11688
GCA_011682945.1	GCA_011682945.1_01533	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VCPA01000028.1	11951	12805
GCA_011682945.1	GCA_011682945.1_01535	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	VCPA01000028.1	13605	14051
GCA_011682945.1	GCA_011682945.1_01824	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	VCPA01000034.1	1544	3463
GCA_011682945.1	GCA_011682945.1_01827	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VCPA01000034.1	6227	8008
GCA_011682945.1	GCA_011682945.1_02071	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	VCPA01000040.1	899	1318
GCA_011682945.1	GCA_011682945.1_02072	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	VCPA01000040.1	1318	2154
GCA_011682945.1	GCA_011682945.1_02074	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VCPA01000040.1	2358	3533
GCA_011682945.1	GCA_011682945.1_02440	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	VCPA01000062.1	183	998
GCA_017315685.1	GCA_017315685.1_00281	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFFRT010000026.1	60462	61751
GCA_017315685.1	GCA_017315685.1_01599	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAFFRT010000007.1	213724	214146
GCA_017315685.1	GCA_017315685.1_01650	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAFFRT010000007.1	273342	274415
GCA_000311825.1	GCA_000311825.1_00367	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	HE978566.1	393143	393874
GCA_000311825.1	GCA_000311825.1_01132	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	495	492	100.00	91.67	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	HE978567.1	269154	270641
GCA_900638055.1	GCA_900638055.1_00150	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LR134484.1	203587	205227
GCA_030284685.1	GCA_030284685.1_00747	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JASUZV010000001.1	228667	229404
GCA_002797155.1	GCA_002797155.1_01970	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	PENF01000002.1	232905	233705
GCA_002797155.1	GCA_002797155.1_01987	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	PENF01000002.1	249929	251854
GCA_002797155.1	GCA_002797155.1_02153	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	PENF01000002.1	450744	451709
GCA_002884635.1	GCA_002884635.1_01092	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	PNGJ01000019.1	16288	17088
GCA_002884635.1	GCA_002884635.1_02247	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.22	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	PNGJ01000005.1	204713	206638
GCA_002884635.1	GCA_002884635.1_02829	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	PNGJ01000009.1	98141	99106
GCA_007097445.1	GCA_007097445.1_00704	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	VKDH01000017.1	38152	39693
GCA_007097445.1	GCA_007097445.1_00705	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VKDH01000017.1	39898	40752
GCA_007097445.1	GCA_007097445.1_01218	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	VKDH01000036.1	88	903
GCA_007097445.1	GCA_007097445.1_02515	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	VKDH01000008.1	899	1318
GCA_007097445.1	GCA_007097445.1_02516	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	VKDH01000008.1	1318	2154
GCA_007097445.1	GCA_007097445.1_02518	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VKDH01000008.1	2358	3533
GCA_003264005.1	GCA_003264005.1_00430	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NAQR01000022.1	3596	3970
GCA_900476055.1	GCA_900476055.1_01550	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.15	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	LS483444.1	1504374	1506110
GCA_900476055.1	GCA_900476055.1_01551	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.30	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	LS483444.1	1506112	1507836
GCA_024295365.1	GCA_024295365.1_00211	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOP010000001.1	205885	207102
GCA_024295365.1	GCA_024295365.1_00212	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOP010000001.1	207222	208685
GCA_024295365.1	GCA_024295365.1_00217	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOP010000001.1	210426	210854
GCA_024295365.1	GCA_024295365.1_01033	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCOP010000003.1	158289	160013
GCA_024295365.1	GCA_024295365.1_01034	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCOP010000003.1	160015	161751
GCA_024295365.1	GCA_024295365.1_01351	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCOP010000004.1	180663	182582
GCA_024295365.1	GCA_024295365.1_01623	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCOP010000005.1	224935	226830
GCA_000361145.1	GCA_000361145.1_00077	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	KB821335.1	89773	91131
GCA_000361145.1	GCA_000361145.1_00273	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	KB821335.1	318460	319815
GCA_000361145.1	GCA_000361145.1_00310	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	KB821335.1	353123	353734
GCA_000361145.1	GCA_000361145.1_01609	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	KB821335.1	1665767	1666498
GCA_000361145.1	GCA_000361145.1_01610	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	KB821335.1	1666624	1667406
GCA_000361145.1	GCA_000361145.1_01729	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KB821335.1	1809407	1810699
GCA_000361145.1	GCA_000361145.1_01767	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	KB821335.1	1840955	1841677
GCA_000361145.1	GCA_000361145.1_01768	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	KB821335.1	1841802	1842509
GCA_000361145.1	GCA_000361145.1_01774	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.36	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	KB821335.1	1847625	1848560
GCA_000361145.1	GCA_000361145.1_01782	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	KB821335.1	1854762	1855517
GCA_000361145.1	GCA_000361145.1_01783	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	KB821335.1	1855556	1855951
GCA_000361145.1	GCA_000361145.1_01785	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	KB821335.1	1856481	1857209
GCA_000361145.1	GCA_000361145.1_01786	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	KB821335.1	1857244	1857963
GCA_000361145.1	GCA_000361145.1_01787	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	KB821335.1	1858244	1859008
GCA_000361145.1	GCA_000361145.1_01943	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	KB821335.1	1983845	1984195
GCA_000361145.1	GCA_000361145.1_01948	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	KB821335.1	1986409	1986900
GCA_000361145.1	GCA_000361145.1_02021	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	KB821335.1	2039110	2039244
GCA_000361145.1	GCA_000361145.1_02166	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	KB821335.1	2190955	2192397
GCA_000361145.1	GCA_000361145.1_02340	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	KB821335.1	2342740	2343159
GCA_000361145.1	GCA_000361145.1_02424	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	KB821335.1	2431535	2432500
GCA_000361145.1	GCA_000361145.1_02425	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	KB821335.1	2433067	2434014
GCA_000361145.1	GCA_000361145.1_02426	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	KB821335.1	2434016	2434993
GCA_000361145.1	GCA_000361145.1_02651	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	KB821335.1	2672148	2673677
GCA_000361145.1	GCA_000361145.1_02685	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KB821335.1	2717007	2718059
GCA_000361145.1	GCA_000361145.1_02762	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	KB821335.1	2798526	2798930
GCA_000361145.1	GCA_000361145.1_02763	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	KB821335.1	2799147	2799890
GCA_000361145.1	GCA_000361145.1_02766	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	KB821335.1	2801734	2803740
GCA_000361145.1	GCA_000361145.1_02767	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	KB821335.1	2803840	2805597
GCA_000361145.1	GCA_000361145.1_02768	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	KB821335.1	2805597	2805968
GCA_000361145.1	GCA_000361145.1_02778	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	KB821336.1	949	1566
GCA_000361145.1	GCA_000361145.1_02789	sed	staphylococcal enterotoxin type D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	258	258	100.00	99.61	258	AAB06195.1	staphylococcal enterotoxin type D	NA	NA	KB821336.1	11879	12655
GCA_000361145.1	GCA_000361145.1_02792	sej	staphylococcal enterotoxin type J	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	268	268	100.00	100.00	268	AAC78590.1	staphylococcal enterotoxin type J	NA	NA	KB821336.1	13550	14356
GCA_000361145.1	GCA_000361145.1_02793	ser	staphylococcal enterotoxin type R	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	259	259	100.00	99.61	259	EVY93839.1	staphylococcal enterotoxin type R	NA	NA	KB821336.1	14446	15225
GCA_000361145.1	GCA_000361145.1_02799	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	KB821336.1	19219	19599
GCA_000361145.1	GCA_000361145.1_02800	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	KB821336.1	19589	21346
GCA_000361145.1	GCA_000361145.1_02801	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	KB821336.1	21453	22298
GCA_009378225.1	GCA_009378225.1_01164	blaBRO-2	class A beta-lactamase BRO-2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003665544.1	class A beta-lactamase BRO-2	NF033103.1	class A beta-lactamase	NXCG01000003.1	54552	55493
GCA_001838295.1	GCA_001838295.1_00618	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV836270.1	390341	391762
GCA_030181115.1	GCA_030181115.1_02266	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JARWIH010000007.1	6359	7174
GCA_030181115.1	GCA_030181115.1_02267	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JARWIH010000007.1	7235	8038
GCA_030181115.1	GCA_030181115.1_02268	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JARWIH010000007.1	8038	8874
GCA_030181115.1	GCA_030181115.1_02269	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JARWIH010000007.1	9376	10236
GCA_018376515.1	GCA_018376515.1_00063	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	93.29	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAHABE010000001.1	68052	69530
GCA_018884205.1	GCA_018884205.1_01018	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	111	107	96.26	54.29	105	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP065522.1	974504	974839
GCA_900407385.1	GCA_900407385.1_00186	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.63	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	UETX01000042.1	44259	45653
GCA_018289035.1	GCA_018289035.1_00021	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	99.59	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	CP072212.1	16558	17292
GCA_018289035.1	GCA_018289035.1_00698	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	97.97	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP072212.1	815888	817813
GCA_018289035.1	GCA_018289035.1_01681	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP072212.1	1892513	1894438
GCA_018289035.1	GCA_018289035.1_01763	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	91.87	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP072212.1	1978120	1979451
GCA_018289035.1	GCA_018289035.1_05354	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	79.51	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP072212.1	6508931	6509812
GCA_018289035.1	GCA_018289035.1_05541	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP072214.1	37701	38501
GCA_018289035.1	GCA_018289035.1_05543	blaOXA-347	class D beta-lactamase OXA-347	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	274	274	100.00	100.00	274	WP_004295324.1	class D beta-lactamase OXA-347	NF012161.0	class D beta-lactamase	CP072214.1	38704	39528
GCA_018289035.1	GCA_018289035.1_05545	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	CP072214.1	41536	42399
GCA_018289035.1	GCA_018289035.1_05546	ere(D)	EreD family erythromycin esterase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	408	408	100.00	95.34	408	WP_015345560.1	EreD family erythromycin esterase	NF000516.1	EreD family erythromycin esterase	CP072214.1	42600	43826
GCA_018289035.1	GCA_018289035.1_05547	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	378	388	97.42	100.00	378	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	CP072214.1	44214	45350
GCA_030518775.1	GCA_030518775.1_00743	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	745	561	82.17	48.30	470	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP130430.1	814245	816482
GCA_030518775.1	GCA_030518775.1_02343	cml	Cml family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	397	397	100.00	92.95	397	WP_061345584.1	Cml family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP130431.1	190182	191375
GCA_030518775.1	GCA_030518775.1_02359	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	266	266	100.00	72.93	266	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP130431.1	206988	207788
GCA_030518775.1	GCA_030518775.1_03411	bepE	multidrug efflux RND transporter permease subunit BepE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1049	1051	99.71	94.37	1048	AAN29241.1	multidrug efflux RND transporter permease subunit BepE	NA	NA	CP130431.1	1283451	1286600
GCA_030518775.1	GCA_030518775.1_03827	blaOCH	OCH family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	390	390	100.00	98.21	390	WP_063860894.1	extended-spectrum class C beta-lactamase OCH-8	NF000264.2	OCH family extended-spectrum class C beta-lactamase	CP130431.1	1714135	1715307
GCA_916862695.1	GCA_916862695.1_01297	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAKASP010000003.1	117792	119432
GCA_916862695.1	GCA_916862695.1_01435	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.12	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CAKASP010000004.1	51804	53198
GCA_023109005.1	GCA_023109005.1_01631	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALDTU010000006.1	120777	122696
GCA_023109005.1	GCA_023109005.1_01636	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDTU010000006.1	124422	125885
GCA_023109005.1	GCA_023109005.1_01637	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDTU010000006.1	126005	127222
GCA_028596105.1	GCA_028596105.1_00181	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	133	98.50	71.97	132	WP_063851233.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP117193.1	207321	207740
GCA_028596105.1	GCA_028596105.1_01773	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	93.75	144	AAC38229.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP117193.1	1837085	1837519
GCA_028596105.1	GCA_028596105.1_01774	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	AAA98222.1	mercuric transport protein MerT	NA	NA	CP117193.1	1837591	1837941
GCA_028596105.1	GCA_028596105.1_01775	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	98.90	93.33	90	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP117193.1	1837957	1838232
GCA_028596105.1	GCA_028596105.1_01776	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	81	81	100.00	100.00	81	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	CP117193.1	1838235	1838480
GCA_028596105.1	GCA_028596105.1_01777	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	548	561	100.00	85.38	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP117193.1	1838477	1840123
GCA_028596105.1	GCA_028596105.1_01778	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	98.35	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP117193.1	1840139	1840504
GCA_028596105.1	GCA_028596105.1_01779	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP117193.1	1840501	1840737
GCA_028596105.1	GCA_028596105.1_02194	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	206	302	64.90	75.38	199	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP117193.1	2295373	2295993
GCA_028596105.1	GCA_028596105.1_02347	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	120	99.17	56.30	119	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP117193.1	2455364	2455723
GCA_028596105.1	GCA_028596105.1_02371	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.36	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP117193.1	2478416	2481265
GCA_028596105.1	GCA_028596105.1_02374	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	96.71	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	CP117193.1	2484645	2485103
GCA_028596105.1	GCA_028596105.1_02375	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	97.70	304	APX31172.1	heat resistance protein YfdX1	NA	NA	CP117193.1	2485126	2486040
GCA_028596105.1	GCA_028596105.1_02376	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	92.20	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP117193.1	2486143	2487030
GCA_028596105.1	GCA_028596105.1_02377	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	94.58	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CP117193.1	2487127	2487738
GCA_028596105.1	GCA_028596105.1_02379	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	94.52	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	CP117193.1	2488953	2489393
GCA_028596105.1	GCA_028596105.1_02380	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	571	571	99.82	91.58	570	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	CP117193.1	2489397	2491112
GCA_028596105.1	GCA_028596105.1_02381	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	89.09	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	CP117193.1	2491109	2491606
GCA_022834935.1	GCA_022834935.1_00195	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	292	304	97.04	39.39	297	WP_064964607.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	BQNI01000001.1	250247	251125
GCA_022834935.1	GCA_022834935.1_02334	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	BQNI01000001.1	2842051	2843976
GCA_022834935.1	GCA_022834935.1_02363	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	PARTIALP	167	266	62.78	97.60	167	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NA	NA	BQNI01000001.1	2874004	2874507
GCA_022485825.1	GCA_022485825.1_00185	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.19	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFF010000011.1	67977	69269
GCA_001069785.1	GCA_001069785.1_00020	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JVSR01000009.1	4651	5868
GCA_001069785.1	GCA_001069785.1_00021	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JVSR01000009.1	5988	7451
GCA_001069785.1	GCA_001069785.1_01408	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JVSR01000080.1	8981	10717
GCA_001069785.1	GCA_001069785.1_01409	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JVSR01000080.1	10719	12443
GCA_000194985.1	GCA_000194985.1_01068	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GL878519.1	1090370	1092265
GCA_000194985.1	GCA_000194985.1_01083	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	125	123	100.00	46.88	128	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	GL878519.1	1097926	1098303
GCA_000194985.1	GCA_000194985.1_01133	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	GL878519.1	1140344	1142263
GCA_018367605.1	GCA_018367605.1_01035	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.99	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAGZFV010000030.1	4329	6053
GCA_018367605.1	GCA_018367605.1_01036	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.80	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAGZFV010000030.1	6055	7791
GCA_009771075.1	GCA_009771075.1_01432	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	WNXV01000026.1	27766	29685
GCA_001697625.1	GCA_001697625.1_00052	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016660.1	55010	56578
GCA_001697625.1	GCA_001697625.1_00054	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016660.1	57403	58035
GCA_001697625.1	GCA_001697625.1_00055	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016660.1	58439	59677
GCA_001697625.1	GCA_001697625.1_00176	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016660.1	194998	195903
GCA_001697625.1	GCA_001697625.1_00922	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016660.1	957430	958809
GCA_001697625.1	GCA_001697625.1_02000	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.82	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016660.1	2026973	2028499
GCA_003041075.1	GCA_003041075.1_00073	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	PZDG01000001.1	82175	83248
GCA_003041075.1	GCA_003041075.1_01640	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PZDG01000008.1	56232	57521
GCA_022689405.1	GCA_022689405.1_00528	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXK010000018.1	3700	4989
GCA_022689405.1	GCA_022689405.1_00529	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALCXK010000018.1	5007	5408
GCA_022689405.1	GCA_022689405.1_01619	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXK010000003.1	242288	242707
GCA_022689405.1	GCA_022689405.1_02053	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXK010000006.1	10223	11296
GCA_022689405.1	GCA_022689405.1_02294	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXK010000007.1	115084	116376
GCA_900445725.1	GCA_900445725.1_01716	blaBOR-1	class A beta-lactamase BOR-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	305	305	100.00	100.00	305	WP_010926363.1	class A beta-lactamase BOR-1	NF040659.1	BOR family class A beta-lactamase	UFTS01000002.1	1825794	1826711
GCA_015839235.1	GCA_015839235.1_01226	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP046356.1	1180555	1181292
GCA_015839235.1	GCA_015839235.1_01237	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP046356.1	1191210	1193129
GCA_015839235.1	GCA_015839235.1_01305	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP046356.1	1252330	1253529
GCA_030225305.1	GCA_030225305.1_00001	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JASOVX010000028.1	170	493
GCA_030225305.1	GCA_030225305.1_00249	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASOVX010000013.1	34811	36103
GCA_030225305.1	GCA_030225305.1_00253	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASOVX010000013.1	39786	40133
GCA_030225305.1	GCA_030225305.1_00403	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JASOVX010000017.1	18314	19780
GCA_030225305.1	GCA_030225305.1_00406	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASOVX010000017.1	21585	21965
GCA_030225305.1	GCA_030225305.1_00407	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASOVX010000017.1	21955	23712
GCA_030225305.1	GCA_030225305.1_00408	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASOVX010000017.1	23819	24664
GCA_030225305.1	GCA_030225305.1_01562	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASOVX010000002.1	287137	288429
GCA_030225305.1	GCA_030225305.1_01591	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JASOVX010000025.1	1191	2570
GCA_001809585.1	GCA_001809585.1_01630	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV798021.1	144395	146035
GCA_009857205.1	GCA_009857205.1_01215	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	99.80	87.37	491	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	WWFC01000001.1	1179893	1181371
GCA_947089735.1	GCA_947089735.1_00387	nimK	5-nitroimidazole reductase NimK	core	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	BLASTP	164	168	97.62	100.00	164	WP_268871842.1	5-nitroimidazole reductase NimK	NA	NA	CAMULN010000003.1	56963	57457
GCA_947089735.1	GCA_947089735.1_01203	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAMULN010000016.1	13764	14729
GCA_002094005.1	GCA_002094005.1_01355	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LXOU01000007.1	1385272	1387191
GCA_002094005.1	GCA_002094005.1_01708	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	LXOU01000013.1	143055	144518
GCA_002094005.1	GCA_002094005.1_01709	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	LXOU01000013.1	144638	145855
GCA_002443115.1	GCA_002443115.1_01553	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP023482.1	1657216	1658070
GCA_002443115.1	GCA_002443115.1_01562	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP023482.1	1664151	1665326
GCA_002443115.1	GCA_002443115.1_01595	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP023482.1	1690341	1691516
GCA_000814205.1	GCA_000814205.1_00113	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	95.74	141	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP010377.1	108374	108799
GCA_000814205.1	GCA_000814205.1_00114	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP010377.1	108812	110101
GCA_000814205.1	GCA_000814205.1_00115	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	95.37	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP010377.1	110149	111900
GCA_000814205.1	GCA_000814205.1_00116	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	91.67	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP010377.1	111918	112280
GCA_000814205.1	GCA_000814205.1_00117	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	116	117	98.29	94.78	115	AAB09624.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP010377.1	112328	112678
GCA_000814205.1	GCA_000814205.1_00441	blaACT-37	cephalosporin-hydrolyzing class C beta-lactamase ACT-37	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	381	381	100.00	100.00	381	WP_039272978.1	cephalosporin-hydrolyzing class C beta-lactamase ACT-37	NF000385.4	ACT family cephalosporin-hydrolyzing class C beta-lactamase	CP010377.1	440321	441466
GCA_000814205.1	GCA_000814205.1_01534	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	99.29	87.86	140	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP010377.1	1532748	1533179
GCA_000814205.1	GCA_000814205.1_02078	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	101	102	100.00	77.14	105	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP010377.1	2069987	2070292
GCA_000814205.1	GCA_000814205.1_02097	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	225	217	94.01	66.34	205	WP_063843208.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP010377.1	2089818	2090495
GCA_000814205.1	GCA_000814205.1_03200	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	100.00	96.86	1050	WP_040224644.1	multidrug efflux RND transporter permease subunit OqxB27	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP010377.1	3272072	3275224
GCA_000814205.1	GCA_000814205.1_03721	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	141	141	100.00	86.52	141	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP010377.1	3805255	3805680
GCA_000814205.1	GCA_000814205.1_04228	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	92.36	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	CP010377.1	4302360	4302794
GCA_000814205.1	GCA_000814205.1_04229	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP010377.1	4303012	4304412
GCA_000814205.1	GCA_000814205.1_04230	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP010377.1	4304409	4305089
GCA_000814205.1	GCA_000814205.1_04231	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP010377.1	4305144	4306073
GCA_000814205.1	GCA_000814205.1_04232	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP010377.1	4306078	4306458
GCA_000814205.1	GCA_000814205.1_04233	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP010377.1	4306498	4307394
GCA_000814205.1	GCA_000814205.1_04234	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.67	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP010377.1	4307394	4309211
GCA_000814205.1	GCA_000814205.1_04238	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	95.10	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP010377.1	4311193	4313640
GCA_000814205.1	GCA_000814205.1_04240	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.66	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP010377.1	4314293	4317439
GCA_000814205.1	GCA_000814205.1_04241	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	96.28	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP010377.1	4317450	4318742
GCA_000814205.1	GCA_000814205.1_04242	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	97.44	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP010377.1	4318856	4319209
GCA_000814205.1	GCA_000814205.1_04243	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.05	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP010377.1	4319237	4320622
GCA_000814205.1	GCA_000814205.1_04244	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP010377.1	4320812	4321492
GCA_000814205.1	GCA_000814205.1_04245	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	493	491	100.00	98.37	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP010377.1	4321485	4322966
GCA_000814205.1	GCA_000814205.1_04246	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	EXACTP	143	143	100.00	100.00	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP010377.1	4323211	4323642
GCA_000814205.1	GCA_000814205.1_04404	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	294	300	97.67	89.42	293	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP010377.1	4511242	4512126
GCA_000814205.1	GCA_000814205.1_04733	terW	tellurium resistance protein TerW	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	155	155	100.00	100.00	155	AAC44736.1	tellurium resistance protein TerW	NA	NA	CP010380.1	204966	205433
GCA_000814205.1	GCA_000814205.1_04740	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	193	193	100.00	96.37	193	AAA86846.1	tellurium resistance-associated protein TerZ	NA	NA	CP010380.1	212006	212587
GCA_000814205.1	GCA_000814205.1_04744	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	95.83	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP010380.1	215334	215912
GCA_000814205.1	GCA_000814205.1_04880	blaKPC-2	carbapenem-hydrolyzing class A beta-lactamase KPC-2	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	293	293	100.00	100.00	293	WP_004199234.1	carbapenem-hydrolyzing class A beta-lactamase KPC-2	NF012141.1	KPC family carbapenem-hydrolyzing class A beta-lactamase	CP010379.1	13697	14578
GCA_000814205.1	GCA_000814205.1_04887	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP010379.1	23581	24441
GCA_000814205.1	GCA_000814205.1_04915	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	116	99.14	99.13	115	CAA70196.1	mercuric transport protein MerT	NA	NA	CP010378.1	420	785
GCA_000814205.1	GCA_000814205.1_04916	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	85.71	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP010378.1	801	1076
GCA_000814205.1	GCA_000814205.1_04917	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP010378.1	1104	1529
GCA_000814205.1	GCA_000814205.1_04918	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	93.23	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP010378.1	1568	3253
GCA_000814205.1	GCA_000814205.1_04919	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP010378.1	3271	3636
GCA_000814205.1	GCA_000814205.1_04920	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP010378.1	3633	3869
GCA_000814205.1	GCA_000814205.1_04924	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP010378.1	6284	7123
GCA_000814205.1	GCA_000814205.1_04926	qnrB2	quinolone resistance pentapeptide repeat protein QnrB2	core	AMR	AMR	QUINOLONE	QUINOLONE	ALLELEP	214	214	100.00	100.00	214	WP_012695489.1	quinolone resistance pentapeptide repeat protein QnrB2	NF000420.1	QnrB family quinolone resistance pentapeptide repeat protein	CP010378.1	7614	8258
GCA_000814205.1	GCA_000814205.1_04934	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP010378.1	15673	16512
GCA_000814205.1	GCA_000814205.1_04935	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP010378.1	16506	16853
GCA_000814205.1	GCA_000814205.1_04936	dfrB3	trimethoprim-resistant dihydrofolate reductase DfrB3	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	78	78	100.00	100.00	78	WP_010890144.1	trimethoprim-resistant dihydrofolate reductase DfrB3	NF000331.2	trimethoprim-resistant dihydrofolate reductase DfrB	CP010378.1	17385	17621
GCA_030176595.1	GCA_030176595.1_01365	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUR010000002.1	163875	164729
GCA_014653575.1	GCA_014653575.1_00985	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	283	289	96.54	43.37	279	WP_063859390.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	BNAQ01000001.1	1023158	1024009
GCA_958434595.1	GCA_958434595.1_00950	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAUBDA010000006.1	77398	79056
GCA_019329525.1	GCA_019329525.1_00827	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073840.1	805275	805760
GCA_019329525.1	GCA_019329525.1_00830	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073840.1	807516	808955
GCA_019329525.1	GCA_019329525.1_00951	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073840.1	884583	885224
GCA_019329525.1	GCA_019329525.1_00972	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073840.1	904044	904889
GCA_019329525.1	GCA_019329525.1_00973	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073840.1	904996	906753
GCA_019329525.1	GCA_019329525.1_00974	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073840.1	906743	907123
GCA_019329525.1	GCA_019329525.1_02463	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073840.1	2422204	2423271
GCA_019329525.1	GCA_019329525.1_02514	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073840.1	2481069	2481305
GCA_019329525.1	GCA_019329525.1_02591	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073840.1	2563943	2564290
GCA_019329525.1	GCA_019329525.1_02594	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073840.1	2566459	2567757
GCA_019329525.1	GCA_019329525.1_02604	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073840.1	2576543	2577193
GCA_019329525.1	GCA_019329525.1_02605	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073840.1	2577275	2578918
GCA_019329525.1	GCA_019329525.1_02606	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073840.1	2578976	2579314
GCA_019329525.1	GCA_019329525.1_02652	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073840.1	2618280	2618651
GCA_019329525.1	GCA_019329525.1_02653	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073840.1	2618651	2620408
GCA_019329525.1	GCA_019329525.1_02654	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073840.1	2620508	2622514
GCA_019329525.1	GCA_019329525.1_02751	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073839.1	7492	8052
GCA_019329525.1	GCA_019329525.1_02752	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073839.1	8237	9781
GCA_001632305.1	GCA_001632305.1_00250	taeA	ABC-F type ribosomal protection protein TaeA	core	AMR	AMR	PLEUROMUTILIN	TIAMULIN	BLASTP	651	648	100.00	91.86	651	WP_071223118.1	ABC-F type ribosomal protection protein TaeA	NA	NA	CP015286.1	256037	257992
GCA_001632305.1	GCA_001632305.1_00430	tetB(58)	tetracycline efflux ABC transporter Tet(58) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	271	271	100.00	91.88	271	WP_071223302.1	tetracycline efflux ABC transporter Tet(58) subunit B	NA	NA	CP015286.1	466128	466943
GCA_001632305.1	GCA_001632305.1_01781	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	312	304	92.11	66.90	287	WP_087344360.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	CP015286.1	1898728	1899666
GCA_001632305.1	GCA_001632305.1_03131	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	97.56	44.64	280	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP015286.1	3416018	3416881
GCA_001632305.1	GCA_001632305.1_04521	aac(2)-IIb	kasugamycin N-acetyltransferase AAC(2)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	HMM	239	240	99.58	66.95	239	WP_071224044.1	kasugamycin N-acetyltransferase AAC(2)-IIb	NF033472.1	kasugamycin N-acetyltransferase AAC(2)-IIb	CP015286.1	4879455	4880174
GCA_001632305.1	GCA_001632305.1_04692	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	68.06	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP015286.1	5070099	5070749
GCA_001147205.1	GCA_001147205.1_00203	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CKBD01000002.1	44005	45924
GCA_001147205.1	GCA_001147205.1_01374	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CKBD01000026.1	26476	27609
GCA_023299425.1	GCA_023299425.1_00448	lsa(A)	ABC-F type ribosomal protection protein Lsa(A)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	498	498	100.00	99.40	498	WP_002387187.1	ABC-F type ribosomal protection protein Lsa(A)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP097010.1	484798	486294
GCA_023299425.1	GCA_023299425.1_00593	optrA	ABC-F type ribosomal protection protein OptrA	core	AMR	AMR	OXAZOLIDINONE/PHENICOL	FLORFENICOL/OXAZOLIDINONE	BLASTP	637	655	97.25	99.69	637	WP_063854496.1	ABC-F type ribosomal protection protein OptrA	NF000514.1	ABC-F type ribosomal protection protein OptrA	CP097010.1	623058	624971
GCA_023299425.1	GCA_023299425.1_00595	fexA	chloramphenicol/florfenicol efflux MFS transporter FexA	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	475	475	100.00	99.37	475	WP_015585966.1	chloramphenicol/florfenicol efflux MFS transporter FexA	NF000218.1	chloramphenicol/florfenicol efflux MFS transporter FexA	CP097010.1	625712	627139
GCA_023299425.1	GCA_023299425.1_00598	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	HMM	243	243	99.59	85.54	242	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP097010.1	629262	629993
GCA_023299425.1	GCA_023299425.1_00599	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP097010.1	630118	630900
GCA_023299425.1	GCA_023299425.1_02690	catA	type A-8 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	215	215	100.00	97.21	215	WP_002352254.1	type A-8 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP097011.1	5809	6456
GCA_023299425.1	GCA_023299425.1_02692	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP097011.1	7498	8874
GCA_023299425.1	GCA_023299425.1_02693	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_001574275.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP097011.1	9068	10987
GCA_023299425.1	GCA_023299425.1_02732	tcrB	copper-translocating P-type ATPase TcrB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	710	710	100.00	99.86	710	AAL05407.1	copper-translocating P-type ATPase TcrB	NA	NA	CP097011.1	44159	46291
GCA_023299425.1	GCA_023299425.1_02772	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP097011.1	76223	76960
GCA_023299425.1	GCA_023299425.1_02773	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP097011.1	77710	78504
GCA_023299425.1	GCA_023299425.1_02774	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP097011.1	78597	79139
GCA_023299425.1	GCA_023299425.1_02775	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP097011.1	79136	80044
GCA_023299425.1	GCA_023299425.1_02780	lnu(B)	lincosamide nucleotidyltransferase Lnu(B)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	267	267	100.00	100.00	267	WP_002294514.1	lincosamide nucleotidyltransferase Lnu(B)	NF000235.3	lincosamide nucleotidyltransferase Lnu(B)	CP097011.1	83552	84355
GCA_023299425.1	GCA_023299425.1_02781	lsa(E)	ABC-F type ribosomal protection protein Lsa(E)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	PARTIALP	402	494	81.38	100.00	402	WP_002294513.1	ABC-F type ribosomal protection protein Lsa(E)	NA	NA	CP097011.1	84409	85617
GCA_023299425.1	GCA_023299425.1_02785	spw	ANT(9) family aminoglycoside nucleotidyltransferase Spw	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	269	269	100.00	100.00	269	WP_002294509.1	ANT(9) family aminoglycoside nucleotidyltransferase Spw	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP097011.1	87961	88770
GCA_023299425.1	GCA_023299425.1_02787	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	218	287	75.96	100.00	218	WP_002294505.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	NA	CP097011.1	89473	90129
GCA_023299425.1	GCA_023299425.1_02789	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP097011.1	90395	91834
GCA_023299425.1	GCA_023299425.1_02792	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP097011.1	92661	93398
GCA_023299425.1	GCA_023299425.1_02796	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	168	165	98.18	100.00	162	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP097011.1	95446	95952
GCA_023299425.1	GCA_023299425.1_02803	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP097011.1	99897	100634
GCA_003045035.1	GCA_003045035.1_00081	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	POXT01000001.1	79311	80690
GCA_003045035.1	GCA_003045035.1_00661	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.83	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	POXT01000003.1	145035	146561
GCA_003045035.1	GCA_003045035.1_00771	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	POXT01000004.1	79520	80758
GCA_003045035.1	GCA_003045035.1_00772	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	POXT01000004.1	81007	81639
GCA_003045035.1	GCA_003045035.1_01144	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	POXT01000016.1	23666	24571
GCA_009496035.1	GCA_009496035.1_01535	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJJ01000006.1	36919	38118
GCA_006094395.1	GCA_006094395.1_00029	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP035291.1	32060	33349
GCA_006094395.1	GCA_006094395.1_00127	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP035291.1	142188	143480
GCA_006094395.1	GCA_006094395.1_02469	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	PARTIALP	88	122	72.13	96.59	88	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP035292.1	21664	21930
GCA_902509515.1	GCA_902509515.1_00051	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	LR735437.1	56800	58806
GCA_902509515.1	GCA_902509515.1_00052	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	LR735437.1	58906	59892
GCA_902509515.1	GCA_902509515.1_00137	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR735437.1	151746	153035
GCA_902509515.1	GCA_902509515.1_00140	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LR735437.1	155213	155560
GCA_902509515.1	GCA_902509515.1_00215	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	LR735437.1	245020	245448
GCA_902509515.1	GCA_902509515.1_00946	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	LR735437.1	987897	988742
GCA_902509515.1	GCA_902509515.1_00947	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	LR735437.1	988849	990606
GCA_902509515.1	GCA_902509515.1_00948	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	LR735437.1	990596	990976
GCA_902509515.1	GCA_902509515.1_02515	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	LR735438.1	15617	16351
GCA_902509515.1	GCA_902509515.1_02519	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	LR735438.1	18131	18616
GCA_902509515.1	GCA_902509515.1_02527	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	LR735438.1	23788	25227
GCA_902509515.1	GCA_902509515.1_02539	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	LR735438.1	35298	35858
GCA_902509515.1	GCA_902509515.1_02540	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.42	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	LR735438.1	36041	37585
GCA_902509515.1	GCA_902509515.1_02544	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	LR735439.1	775	1098
GCA_020740115.1	GCA_020740115.1_00026	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	354	350	97.71	53.64	343	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAJGAY010000011.1	5076	6140
GCA_020740115.1	GCA_020740115.1_00038	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAJGAY010000011.1	16984	18528
GCA_020740115.1	GCA_020740115.1_00039	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAJGAY010000011.1	18712	19272
GCA_020740115.1	GCA_020740115.1_00041	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAJGAY010000012.1	138	983
GCA_020740115.1	GCA_020740115.1_00042	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAJGAY010000012.1	1090	2847
GCA_020740115.1	GCA_020740115.1_00043	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAJGAY010000012.1	2837	3217
GCA_020740115.1	GCA_020740115.1_00046	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAJGAY010000012.1	5022	6488
GCA_020740115.1	GCA_020740115.1_00096	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAJGAY010000016.1	600	1979
GCA_020740115.1	GCA_020740115.1_00106	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_001829870.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAJGAY010000018.1	2063	2548
GCA_020740115.1	GCA_020740115.1_00107	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JAJGAY010000019.1	334	975
GCA_020740115.1	GCA_020740115.1_01518	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAJGAY010000002.1	458214	458561
GCA_020740115.1	GCA_020740115.1_01522	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJGAY010000002.1	462244	463536
GCA_020740115.1	GCA_020740115.1_01574	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JAJGAY010000002.1	510876	511862
GCA_020740115.1	GCA_020740115.1_01575	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAJGAY010000002.1	511962	513968
GCA_009738225.1	GCA_009738225.1_00722	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP018187.1	693357	694574
GCA_009738225.1	GCA_009738225.1_00723	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.18	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP018187.1	694694	696157
GCA_009738225.1	GCA_009738225.1_00727	catA16	type A-16 chloramphenicol O-acetyltransferase CatQ	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	219	219	100.00	98.63	219	WP_063843221.1	type A-16 chloramphenicol O-acetyltransferase CatQ	NF000491.1	type A chloramphenicol O-acetyltransferase	CP018187.1	698252	698911
GCA_009738225.1	GCA_009738225.1_02281	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	CP018188.1	121181	121675
GCA_008305695.1	GCA_008305695.1_00460	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.28	639	WP_011860841.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP040804.1	397403	399322
GCA_008305695.1	GCA_008305695.1_00939	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP040804.1	863289	864506
GCA_008305695.1	GCA_008305695.1_00940	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP040804.1	864626	866089
GCA_019375605.1	GCA_019375605.1_02357	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	167	321	52.02	100.00	167	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NA	NA	JAHXCD010000006.1	181246	181749
GCA_019375605.1	GCA_019375605.1_02400	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCD010000007.1	61583	62773
GCA_013267755.1	GCA_013267755.1_01775	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_050824634.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP053940.1	2078101	2080020
GCA_001659645.1	GCA_001659645.1_00945	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	LXMC01000002.1	1007963	1009426
GCA_001659645.1	GCA_001659645.1_00946	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	LXMC01000002.1	1009546	1010763
GCA_014267295.1	GCA_014267295.1_00261	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMVL010000016.1	595	1161
GCA_014267295.1	GCA_014267295.1_00262	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMVL010000016.1	1339	2883
GCA_014267295.1	GCA_014267295.1_00411	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	86.25	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVL010000002.1	79605	80894
GCA_014267295.1	GCA_014267295.1_00605	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMVL010000002.1	281986	282831
GCA_014267295.1	GCA_014267295.1_00606	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMVL010000002.1	282938	284695
GCA_014267295.1	GCA_014267295.1_00607	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMVL010000002.1	284685	285065
GCA_000296595.1	GCA_000296595.1_00038	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP003808.1	41149	43155
GCA_000296595.1	GCA_000296595.1_00126	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP003808.1	133492	134850
GCA_000296595.1	GCA_000296595.1_00386	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.67	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP003808.1	406532	407887
GCA_000296595.1	GCA_000296595.1_00962	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP003808.1	980074	981993
GCA_000296595.1	GCA_000296595.1_01617	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	279	250	100.00	96.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP003808.1	1679122	1679961
GCA_000296595.1	GCA_000296595.1_01668	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	524	524	100.00	99.24	524	WP_063856936.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP003808.1	1731386	1732960
GCA_000296595.1	GCA_000296595.1_01787	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP003808.1	1875272	1876564
GCA_000296595.1	GCA_000296595.1_01967	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP003808.1	2019939	2020319
GCA_000296595.1	GCA_000296595.1_01968	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP003808.1	2020309	2022066
GCA_000296595.1	GCA_000296595.1_01969	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP003808.1	2022173	2023018
GCA_000296595.1	GCA_000296595.1_02004	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP003808.1	2057513	2057647
GCA_000296595.1	GCA_000296595.1_02166	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP003808.1	2221462	2222904
GCA_000296595.1	GCA_000296595.1_02423	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.03	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP003808.1	2460599	2461564
GCA_000296595.1	GCA_000296595.1_02424	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP003808.1	2462132	2463079
GCA_000296595.1	GCA_000296595.1_02425	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP003808.1	2463081	2464058
GCA_000296595.1	GCA_000296595.1_02640	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP003808.1	2693128	2694657
GCA_000296595.1	GCA_000296595.1_02676	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	98.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP003808.1	2741446	2742498
GCA_003493485.1	GCA_003493485.1_00542	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQKG01000001.1	542203	543597
GCA_003493485.1	GCA_003493485.1_01516	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	QQKG01000003.1	138655	139515
GCA_012911545.1	GCA_012911545.1_00046	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAALOC010000001.1	43251	44468
GCA_012911545.1	GCA_012911545.1_00047	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAALOC010000001.1	44588	46051
GCA_001462375.1	GCA_001462375.1_00068	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	LLVT01000001.1	72465	73319
GCA_001188045.2	GCA_001188045.2_00018	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP030102.1	14522	14836
GCA_001188045.2	GCA_001188045.2_00019	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.77	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP030102.1	14836	16125
GCA_001188045.2	GCA_001188045.2_00020	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	98.47	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP030102.1	16143	16538
GCA_001188045.2	GCA_001188045.2_00457	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	133	133	100.00	100.00	133	WP_003726635.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP030101.1	405816	406217
GCA_001188045.2	GCA_001188045.2_00543	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	96.62	296	AHJ03495.1	class 3 internalin InlC	NA	NA	CP030101.1	497466	498359
GCA_001188045.2	GCA_001188045.2_01214	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	388	388	100.00	94.59	388	AEO26812.1	class 3 internalin InlP	NA	NA	CP030101.1	1153561	1154727
GCA_001188045.2	GCA_001188045.2_01302	ami	autolysin Ami	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	917	917	100.00	99.13	917	ASH48222.1	autolysin Ami	NA	NA	CP030101.1	1244460	1247213
GCA_001188045.2	GCA_001188045.2_01958	vip	cell invasion LPXTG protein Vip	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	403	399	100.00	86.60	403	AEO24620.1	cell invasion LPXTG protein Vip	NF033201.1	cell invasion LPXTG protein Vip	CP030101.1	1897998	1899209
GCA_001188045.2	GCA_001188045.2_01969	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1781	1778	100.00	93.71	1781	AEO24631.1	class 1 internalin InlI	NA	NA	CP030101.1	1912787	1918132
GCA_001188045.2	GCA_001188045.2_02084	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	36.71	858	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA	CP030101.1	2015761	2018163
GCA_001188045.2	GCA_001188045.2_02085	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	95.56	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA	CP030101.1	2018248	2020140
GCA_001188045.2	GCA_001188045.2_02088	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	92.68	205	AEO24735.1	nuclear targeted protein LntA	NA	NA	CP030101.1	2021840	2022457
GCA_001188045.2	GCA_001188045.2_02155	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	609	605	100.00	94.30	614	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA	CP030101.1	2088471	2090300
GCA_001188045.2	GCA_001188045.2_02594	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	97.90	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP030101.1	2512688	2514259
GCA_001188045.2	GCA_001188045.2_02751	aut	peptidoglycan hydrolase Auto	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	572	572	100.00	98.78	572	ADB67911.1	peptidoglycan hydrolase Auto	NA	NA	CP030101.1	2657260	2658978
GCA_001188045.2	GCA_001188045.2_02971	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	606	598	100.00	90.76	606	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK	CP030101.1	2855172	2856992
GCA_000722845.1	GCA_000722845.1_00637	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JPGB01000004.1	378360	378788
GCA_000238095.2	GCA_000238095.2_01579	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.23	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JH815225.1	1771561	1773039
GCA_022689575.1	GCA_022689575.1_01747	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCXB010000003.1	87869	88216
GCA_022689575.1	GCA_022689575.1_01750	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXB010000003.1	90384	91673
GCA_028327985.1	GCA_028327985.1_01783	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMNG010000007.1	70517	71248
GCA_028327985.1	GCA_028327985.1_01874	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMNG010000009.1	20732	22651
GCA_000024105.1	GCA_000024105.1_00389	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	123	123	100.00	50.79	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP001708.1	403068	403439
GCA_000364825.1	GCA_000364825.1_00289	aac(2)-Ic	aminoglycoside N-acetyltransferase AAC(2)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	181	181	100.00	100.00	181	WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	NF000034.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	CP005082.1	314298	314843
GCA_000364825.1	GCA_000364825.1_02162	erm(37)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	150	179	83.80	99.33	150	WP_003900446.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	NA	NA	CP005082.1	2231576	2232028
GCA_000364825.1	GCA_000364825.1_02252	blaC	class A beta-lactamase BlaC	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	307	307	100.00	100.00	307	WP_003410677.1	class A beta-lactamase BlaC	NF041154.1	class A beta-lactamase BlaC	CP005082.1	2325688	2326611
GCA_000179335.1	GCA_000179335.1_00268	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AEAA01000121.1	6351	8270
GCA_018373895.1	GCA_018373895.1_01606	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	100.00	45.53	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHAGF010000011.1	19306	19671
GCA_013347325.1	GCA_013347325.1_00783	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	400	390	96.15	47.34	376	WP_063857697.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP054624.1	840472	841674
GCA_013347325.1	GCA_013347325.1_01558	blaOXA	OXA-837 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	301	100.00	82.30	305	WP_148281568.1	OXA-837 family class D beta-lactamase	NF042983.1	OXA-837 family class D beta-lactamase	CP054624.1	1703442	1704359
GCA_013347325.1	GCA_013347325.1_02751	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.15	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP054626.1	817541	820390
GCA_013347325.1	GCA_013347325.1_02755	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	166	165	93.33	88.31	154	APX31178.1	heat resistance protein PsiE-GI	NA	NA	CP054626.1	824261	824761
GCA_013347325.1	GCA_013347325.1_04329	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	266	267	94.76	72.73	253	WP_010890156.1	APH(3) family aminoglycoside O-phosphotransferase	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	CP054626.1	2562289	2563089
GCA_013347325.1	GCA_013347325.1_04816	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	561	561	100.00	82.17	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP054626.1	3094043	3095728
GCA_013347325.1	GCA_013347325.1_04817	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	139	141	100.00	70.92	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP054626.1	3095769	3096188
GCA_013347325.1	GCA_013347325.1_04818	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	90	91	100.00	82.42	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP054626.1	3096217	3096489
GCA_013347325.1	GCA_013347325.1_05084	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	97	91	97.80	65.22	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP054626.1	3377555	3377848
GCA_013347325.1	GCA_013347325.1_05173	aac(3)-IVb	aminoglycoside N-acetyltransferase AAC(3)-IVb	core	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	BLASTP	265	265	99.62	89.02	264	WP_149317372.1	aminoglycoside N-acetyltransferase AAC(3)-IVb	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	CP054626.1	3472611	3473408
GCA_003956005.1	GCA_003956005.1_00035	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP033814.1	32931	33428
GCA_003956005.1	GCA_003956005.1_00939	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP033814.1	898310	899749
GCA_003956005.1	GCA_003956005.1_00945	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP033814.1	903628	905094
GCA_003956005.1	GCA_003956005.1_00946	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP033814.1	905193	906092
GCA_003956005.1	GCA_003956005.1_01213	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP033814.1	1162679	1163524
GCA_003956005.1	GCA_003956005.1_01214	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP033814.1	1163631	1165388
GCA_003956005.1	GCA_003956005.1_01215	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP033814.1	1165378	1165758
GCA_003956005.1	GCA_003956005.1_01223	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	CP033814.1	1173111	1173434
GCA_003956005.1	GCA_003956005.1_01228	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	199	302	65.89	99.50	199	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	NA	CP033814.1	1176464	1177063
GCA_003956005.1	GCA_003956005.1_01229	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP033814.1	1177060	1177602
GCA_003956005.1	GCA_003956005.1_01230	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP033814.1	1177695	1178489
GCA_003956005.1	GCA_003956005.1_01364	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP033814.1	1306586	1308592
GCA_003956005.1	GCA_003956005.1_01381	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP033814.1	1320572	1321951
GCA_003956005.1	GCA_003956005.1_01412	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP033814.1	1345333	1345734
GCA_003956005.1	GCA_003956005.1_01413	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP033814.1	1345752	1347041
GCA_003956005.1	GCA_003956005.1_01420	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP033814.1	1353842	1354234
GCA_003956005.1	GCA_003956005.1_01421	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP033814.1	1354252	1355544
GCA_003956005.1	GCA_003956005.1_01504	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP033814.1	1430304	1431596
GCA_003956005.1	GCA_003956005.1_02800	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	PARTIALP	887	1024	86.62	100.00	887	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP033813.1	4959	7622
GCA_016907795.1	GCA_016907795.1_02069	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFBCR010000001.1	2325179	2326603
GCA_022688765.1	GCA_022688765.1_00013	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCYJ010000010.1	12519	12899
GCA_022688765.1	GCA_022688765.1_00014	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCYJ010000010.1	12889	14646
GCA_022688765.1	GCA_022688765.1_00015	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCYJ010000010.1	14753	15598
GCA_022688765.1	GCA_022688765.1_00050	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JALCYJ010000012.1	8418	9035
GCA_022688765.1	GCA_022688765.1_00061	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCYJ010000013.1	5139	5699
GCA_022688765.1	GCA_022688765.1_00062	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCYJ010000013.1	5883	7427
GCA_022688765.1	GCA_022688765.1_00084	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	522	522	100.00	100.00	522	WP_032492560.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	JALCYJ010000016.1	2071	3639
GCA_022688765.1	GCA_022688765.1_00094	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JALCYJ010000019.1	1616	1939
GCA_022688765.1	GCA_022688765.1_01672	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCYJ010000002.1	287620	288912
GCA_022688765.1	GCA_022688765.1_02058	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JALCYJ010000003.1	204655	205641
GCA_022688765.1	GCA_022688765.1_02059	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JALCYJ010000003.1	205741	207747
GCA_016027615.1	GCA_016027615.1_02256	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP065689.1	2405878	2407302
GCA_937957785.1	GCA_937957785.1_00010	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	309	147	93.88	43.48	138	ABG05788.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CALFFA010000001.1	7789	8718
GCA_937957785.1	GCA_937957785.1_00274	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	97.68	50.17	303	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CALFFA010000006.1	94407	95306
GCA_937957785.1	GCA_937957785.1_01219	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	72	78	76.92	80.00	60	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CALFFA010000019.1	1245	1463
GCA_937957785.1	GCA_937957785.1_01221	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	561	561	100.00	80.21	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CALFFA010000019.1	1826	3511
GCA_937957785.1	GCA_937957785.1_01222	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	148	140	95.00	77.44	133	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CALFFA010000019.1	3516	3962
GCA_937957785.1	GCA_937957785.1_01223	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	80.43	92	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CALFFA010000019.1	3978	4256
GCA_937957785.1	GCA_937957785.1_01224	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	91.38	116	CAC69249.1	mercuric transport protein MerT	NA	NA	CALFFA010000019.1	4269	4619
GCA_937957785.1	GCA_937957785.1_01232	aac(3)-I	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	158	156	91.03	66.90	142	WP_034006142.1	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CALFFA010000020.1	4487	4963
GCA_937957785.1	GCA_937957785.1_03676	aadA6	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA6	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	281	281	100.00	100.00	281	WP_022675713.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA6	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CALFFA010000061.1	47544	48389
GCA_017355025.1	GCA_017355025.1_00045	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP071512.1	50251	50643
GCA_017355025.1	GCA_017355025.1_00046	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	88.58	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP071512.1	50661	51950
GCA_017355025.1	GCA_017355025.1_00129	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP071512.1	122940	124232
GCA_017355025.1	GCA_017355025.1_00924	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP071512.1	867743	868384
GCA_017355025.1	GCA_017355025.1_02142	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP071512.1	2059372	2061012
GCA_017355025.1	GCA_017355025.1_02160	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP071512.1	2078547	2079107
GCA_017355025.1	GCA_017355025.1_02161	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP071512.1	2079291	2080835
GCA_017355025.1	GCA_017355025.1_02471	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP071513.1	35916	36476
GCA_017355025.1	GCA_017355025.1_02472	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP071513.1	36660	38204
GCA_017355025.1	GCA_017355025.1_02480	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP071514.1	4275	5090
GCA_000167275.1	GCA_000167275.1_00128	hasA	hyaluronan synthase HasA	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	366	427	85.71	99.73	366	KHA45933.1	hyaluronan synthase HasA	NA	NA	AAEP01000051.1	124096	125196
GCA_000167275.1	GCA_000167275.1_00140	cya	anthrax toxin edema factor	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	800	800	100.00	99.88	800	AJG68144.1	anthrax toxin edema factor	NA	NA	AAEP01000051.1	135280	137682
GCA_000167275.1	GCA_000167275.1_00145	atxA	anthrax toxin expression trans-acting transcriptional regulator AtxA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	475	475	100.00	100.00	475	AAD32423.1	anthrax toxin expression trans-acting transcriptional regulator AtxA	NA	NA	AAEP01000051.1	140437	141864
GCA_000167275.1	GCA_000167275.1_00155	pagA	anthrax toxin protective antigen	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	764	764	100.00	99.74	764	AAD32414.1	anthrax toxin protective antigen	NA	NA	AAEP01000051.1	156445	158739
GCA_000167275.1	GCA_000167275.1_00160	lef	anthrax toxin lethal factor	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	809	809	100.00	100.00	809	AAM26117.1	anthrax toxin lethal factor	NA	NA	AAEP01000051.1	162032	164461
GCA_000167275.1	GCA_000167275.1_00220	capE	capsule biosynthesis protein CapE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	47	47	100.00	100.00	47	AAF13659.1	capsule biosynthesis protein CapE	NA	NA	AAEP01000052.1	35630	35773
GCA_000167275.1	GCA_000167275.1_00221	capD	capsule biosynthesis gamma-glutamyltransferase CapD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	528	528	100.00	100.00	528	AAM26219.1	capsule biosynthesis gamma-glutamyltransferase CapD	NA	NA	AAEP01000052.1	35788	37374
GCA_000167275.1	GCA_000167275.1_00222	capA	capsular polyglutamate synthetase CapA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	411	411	100.00	100.00	411	AAM26220.1	capsular polyglutamate synthetase CapA	NA	NA	AAEP01000052.1	37371	38606
GCA_000167275.1	GCA_000167275.1_00223	capC	capsular polyglutamate amide ligase/translocase CapC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	149	149	100.00	100.00	149	AAM26221.1	capsular polyglutamate amide ligase/translocase CapC	NA	NA	AAEP01000052.1	38618	39067
GCA_000167275.1	GCA_000167275.1_00224	capB	capsule biosynthesis protein CapB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	464	464	100.00	100.00	464	AAF13663.1	capsule biosynthesis protein CapB	NA	NA	AAEP01000052.1	39082	40476
GCA_000167275.1	GCA_000167275.1_00758	plcR	transcriptional regulator PlcR	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	213	285	74.74	98.12	213	AAT61178.1	transcriptional regulator PlcR	NA	NA	AAEP01000040.1	30626	31267
GCA_000167275.1	GCA_000167275.1_01263	mphL	macrolide 2-phosphotransferase MphL	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	298	303	98.02	87.21	297	WP_002047670.1	macrolide 2-phosphotransferase MphL	NF038057.1	macrolide 2-phosphotransferase MphL	AAEP01000035.1	67072	67968
GCA_000167275.1	GCA_000167275.1_01563	nheA	non-hemolytic enterotoxin NHE subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	386	386	100.00	97.93	386	AAS40892.1	non-hemolytic enterotoxin NHE subunit A	NA	NA	AAEP01000035.1	342594	343754
GCA_000167275.1	GCA_000167275.1_01564	nheB	non-hemolytic enterotoxin NHE subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	402	402	100.00	98.51	402	AAS40893.1	non-hemolytic enterotoxin NHE subunit B	NA	NA	AAEP01000035.1	343786	344994
GCA_000167275.1	GCA_000167275.1_01627	entFM	enterotoxin EntFM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	420	421	100.00	98.81	421	AFH83235.1	enterotoxin EntFM	NF040678.1	enterotoxin EntFM	AAEP01000035.1	409986	411248
GCA_000167275.1	GCA_000167275.1_01653	sph	sphingomyelinase C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	333	338	98.52	99.70	333	AAP24691.1	sphingomyelinase C	NA	NA	AAEP01000034.1	10989	11990
GCA_000167275.1	GCA_000167275.1_01654	cerA	phospholipase CerA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	283	100.00	98.59	283	AAS39677.1	phospholipase CerA	NA	NA	AAEP01000034.1	12064	12915
GCA_000167275.1	GCA_000167275.1_01659	inhA2	M6 family metalloprotease immune inhibitor InhA2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	799	799	100.00	100.00	799	AAP24685.1	M6 family metalloprotease immune inhibitor InhA2	NA	NA	AAEP01000034.1	16781	19180
GCA_000167275.1	GCA_000167275.1_02782	fosB2	fosfomycin resistance bacillithiol transferase FosB2	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_000938987.1	fosfomycin resistance bacillithiol transferase FosB2	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AAEP01000031.1	326681	327100
GCA_000167275.1	GCA_000167275.1_02896	inhA1	M6 family metalloprotease immune inhibitor InhA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	795	796	100.00	96.61	796	ADH05944.1	M6 family metalloprotease immune inhibitor InhA1	NA	NA	AAEP01000030.1	46558	48945
GCA_000167275.1	GCA_000167275.1_03985	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	184	184	100.00	100.00	184	WP_000054744.1	streptothricin N-acetyltransferase SatA	NA	NA	AAEP01000026.1	219146	219700
GCA_000167275.1	GCA_000167275.1_04138	alo	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	512	512	100.00	99.80	512	AAP27127.1	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	NA	NA	AAEP01000026.1	372108	373646
GCA_000167275.1	GCA_000167275.1_04280	bla2	BcII family subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	EXACTP	256	256	100.00	100.00	256	WP_000799223.1	BcII family subclass B1 metallo-beta-lactamase	NF033095.1	BcII family subclass B1 metallo-beta-lactamase	AAEP01000026.1	502644	503414
GCA_000167275.1	GCA_000167275.1_04522	fosB	FosBx1 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	138	100.00	89.13	138	WP_000943772.1	FosBx1 family fosfomycin resistance bacillithiol transferase	NF041541.1	FosBx1 family fosfomycin resistance bacillithiol transferase	AAEP01000025.1	14530	14946
GCA_000167275.1	GCA_000167275.1_04882	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	219	98.63	57.87	216	WP_087344902.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	AAEP01000025.1	344985	345635
GCA_000167275.1	GCA_000167275.1_04971	bla	class A beta-lactamase Bla1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	306	309	99.03	99.67	306	WP_011053164.1	class A beta-lactamase Bla1	NF033096.1	class A beta-lactamase Bla1	AAEP01000025.1	426641	427561
GCA_000167275.1	GCA_000167275.1_04996	hlyII	hemolysin II HlyII	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	240	412	58.25	96.25	240	AAP10457.1	hemolysin II HlyII	NA	NA	AAEP01000025.1	451144	451866
GCA_000167275.1	GCA_000167275.1_04997	hlyIIR	hemolysin II regulator HlyIIR	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	201	201	100.00	99.50	201	AAO74585.1	hemolysin II regulator HlyIIR	NA	NA	AAEP01000025.1	452397	453002
GCA_000167275.1	GCA_000167275.1_04998	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	82.52	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	AAEP01000025.1	453144	454622
GCA_000167275.1	GCA_000167275.1_05099	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	210	210	98.10	66.67	207	WP_071218948.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	AAEP01000025.1	545976	546608
GCA_000167275.1	GCA_000167275.1_05627	plcA	phosphatidylinositol diacylglycerol-lyase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	329	329	100.00	100.00	329	AAP27624.1	phosphatidylinositol diacylglycerol-lyase	NA	NA	AAEP01000009.1	33994	34983
GCA_017306515.1	GCA_017306515.1_02053	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	220	218	78.44	52.63	171	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JAFKIG010000019.1	39548	40210
GCA_017306515.1	GCA_017306515.1_02054	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	478	631	73.06	45.24	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFKIG010000019.1	40245	41681
GCA_017306515.1	GCA_017306515.1_02100	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	140	137	88.32	50.40	125	WP_012695486.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	JAFKIG010000021.1	1355	1777
GCA_900699155.1	GCA_900699155.1_00216	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.57	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CAADHN010000001.1	202351	205200
GCA_900699155.1	GCA_900699155.1_00217	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	94.92	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CAADHN010000001.1	205410	206297
GCA_900699155.1	GCA_900699155.1_00218	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	95.07	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CAADHN010000001.1	206394	207005
GCA_900699155.1	GCA_900699155.1_00406	blaOXA-283	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	276	276	100.00	100.00	276	WP_004647119.1	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	NF000436.2	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	CAADHN010000002.1	186775	187605
GCA_900699155.1	GCA_900699155.1_02597	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	97.23	76.68	386	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CAADHN010000002.1	2416058	2417278
GCA_900699155.1	GCA_900699155.1_03400	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CAADHN010000002.1	3224308	3224544
GCA_900699155.1	GCA_900699155.1_03401	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CAADHN010000002.1	3224541	3224906
GCA_900699155.1	GCA_900699155.1_03402	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	97.50	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAADHN010000002.1	3224924	3226609
GCA_900699155.1	GCA_900699155.1_03403	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CAADHN010000002.1	3226648	3227073
GCA_900699155.1	GCA_900699155.1_03404	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	84.62	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CAADHN010000002.1	3227101	3227376
GCA_900699155.1	GCA_900699155.1_03405	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	94.83	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CAADHN010000002.1	3227390	3227740
GCA_900699155.1	GCA_900699155.1_03406	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.25	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CAADHN010000002.1	3227812	3228267
GCA_000012045.1	GCA_000012045.1_00035	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP000046.1	39643	41649
GCA_000012045.1	GCA_000012045.1_00036	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP000046.1	41749	42735
GCA_000012045.1	GCA_000012045.1_00115	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP000046.1	136982	138340
GCA_000012045.1	GCA_000012045.1_00391	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP000046.1	411374	412729
GCA_000012045.1	GCA_000012045.1_00429	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP000046.1	445958	446569
GCA_000012045.1	GCA_000012045.1_00880	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	242	242	100.00	100.00	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP000046.1	904800	905528
GCA_000012045.1	GCA_000012045.1_00881	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.17	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP000046.1	905552	906280
GCA_000012045.1	GCA_000012045.1_00901	seb	staphylococcal enterotoxin type B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	AAA88550.1	staphylococcal enterotoxin type B	NA	NA	CP000046.1	916478	917278
GCA_000012045.1	GCA_000012045.1_01636	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP000046.1	1685330	1686082
GCA_000012045.1	GCA_000012045.1_01809	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP000046.1	1878780	1880072
GCA_000012045.1	GCA_000012045.1_01853	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP000046.1	1917447	1918163
GCA_000012045.1	GCA_000012045.1_01856	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP000046.1	1919938	1920660
GCA_000012045.1	GCA_000012045.1_01857	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	235	100.00	98.74	238	ABD31004.1	serine protease SplA	NA	NA	CP000046.1	1920785	1921501
GCA_000012045.1	GCA_000012045.1_01869	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP000046.1	1934671	1935654
GCA_000012045.1	GCA_000012045.1_01870	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP000046.1	1935656	1936591
GCA_000012045.1	GCA_000012045.1_02045	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP000046.1	2082768	2082902
GCA_000012045.1	GCA_000012045.1_02192	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP000046.1	2235375	2236817
GCA_000012045.1	GCA_000012045.1_02368	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP000046.1	2388866	2389285
GCA_000012045.1	GCA_000012045.1_02455	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP000046.1	2478528	2479493
GCA_000012045.1	GCA_000012045.1_02456	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	96.83	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP000046.1	2480061	2481008
GCA_000012045.1	GCA_000012045.1_02457	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP000046.1	2481010	2481987
GCA_000012045.1	GCA_000012045.1_02533	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1243	1115	61.43	99.12	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP000046.1	2559220	2562951
GCA_000012045.1	GCA_000012045.1_02678	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP000046.1	2720850	2722379
GCA_000012045.1	GCA_000012045.1_02712	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	309	350	86.57	99.67	303	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP000046.1	2765683	2766612
GCA_000012045.1	GCA_000012045.1_02762	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP000045.2	1138	2517
GCA_019375775.1	GCA_019375775.1_00352	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCN010000015.1	49791	50756
GCA_019375775.1	GCA_019375775.1_02424	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCN010000071.1	2724	3524
GCA_019375775.1	GCA_019375775.1_02588	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCN010000008.1	19137	20327
GCA_000960085.1	GCA_000960085.1_01784	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JYGT01000010.1	256057	257274
GCA_000960085.1	GCA_000960085.1_01785	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JYGT01000010.1	257394	258857
GCA_027474965.1	GCA_027474965.1_01325	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	207	207	100.00	81.64	207	WP_002570989.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP101410.1	1354069	1354692
GCA_027663695.1	GCA_027663695.1_00394	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQDHM010000001.1	377004	377432
GCA_027663695.1	GCA_027663695.1_00967	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.26	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQDHM010000002.1	217430	219154
GCA_027663695.1	GCA_027663695.1_00968	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.49	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQDHM010000002.1	219156	220892
GCA_017315425.1	GCA_017315425.1_00597	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAFFRL010000001.1	576255	577328
GCA_017315425.1	GCA_017315425.1_00648	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAFFRL010000001.1	636526	636948
GCA_017315425.1	GCA_017315425.1_00770	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAFFRL010000014.1	416	1795
GCA_017315425.1	GCA_017315425.1_02140	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFFRL010000006.1	60462	61751
GCA_017315425.1	GCA_017315425.1_02465	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAFFRL010000009.1	33739	34086
GCA_017315425.1	GCA_017315425.1_02469	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFFRL010000009.1	37769	39061
GCA_017315425.1	GCA_017315425.1_02470	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAFFRL010000009.1	39078	39473
GCA_008330905.1	GCA_008330905.1_00450	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP021724.1	458513	459892
GCA_008330905.1	GCA_008330905.1_01160	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP021724.1	1206225	1207130
GCA_008330905.1	GCA_008330905.1_01280	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.57	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP021724.1	1338065	1339303
GCA_008330905.1	GCA_008330905.1_01281	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP021724.1	1339707	1340339
GCA_008330905.1	GCA_008330905.1_01283	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP021724.1	1341164	1342732
GCA_008330905.1	GCA_008330905.1_01473	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP021724.1	1546100	1547626
GCA_009378755.1	GCA_009378755.1_01354	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCJS01000004.1	102982	103923
GCA_022568975.1	GCA_022568975.1_00861	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKH010000002.1	146298	147371
GCA_022568975.1	GCA_022568975.1_00868	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	137	131	90.84	92.44	119	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKRKH010000002.1	153572	153985
GCA_022568975.1	GCA_022568975.1_01013	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKH010000002.1	309217	310509
GCA_022568975.1	GCA_022568975.1_01662	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKH010000004.1	123770	124189
GCA_030516175.1	GCA_030516175.1_01449	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.77	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100380.1	1525582	1526436
GCA_003355255.1	GCA_003355255.1_00640	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	508	99.61	97.83	506	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP031336.1	645567	647090
GCA_003355255.1	GCA_003355255.1_00836	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP031336.1	855871	857439
GCA_003355255.1	GCA_003355255.1_00838	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP031336.1	858264	858896
GCA_003355255.1	GCA_003355255.1_00839	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP031336.1	859304	860542
GCA_003355255.1	GCA_003355255.1_00966	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP031336.1	997494	998399
GCA_003355255.1	GCA_003355255.1_01693	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP031336.1	1750928	1752307
GCA_900454015.1	GCA_900454015.1_01425	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	UATE01000003.1	317839	319407
GCA_900215245.1	GCA_900215245.1_00950	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	256	267	96.25	56.81	257	WP_012479999.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	LT907842.1	995894	996664
GCA_900215245.1	GCA_900215245.1_03652	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	99.26	63.70	135	WP_015741374.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	LT907842.1	3901004	3901414
GCA_900215245.1	GCA_900215245.1_04945	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	413	100.00	80.05	416	CAK15125.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	LT907842.1	5270341	5271582
GCA_900215245.1	GCA_900215245.1_05421	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	380	397	94.21	58.82	374	WP_104009838.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	LT907842.1	5810213	5811355
GCA_002224675.1	GCA_002224675.1_00755	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	715	641	99.69	99.06	639	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	NMPZ01000004.1	26943	29090
GCA_002224675.1	GCA_002224675.1_01699	cfxA6	broad-spectrum class A beta-lactamase CfxA6	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	320	320	100.00	98.75	320	WP_117664257.1	broad-spectrum class A beta-lactamase CfxA6	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	NMPZ01000010.1	141876	142838
GCA_000613585.1	GCA_000613585.1_02786	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	430	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	BAJG01000001.1	282415	283707
GCA_900445105.1	GCA_900445105.1_00156	tcrB	copper-translocating P-type ATPase TcrB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	726	710	99.72	95.21	710	AAL05407.1	copper-translocating P-type ATPase TcrB	NA	NA	UAPS01000002.1	65504	67684
GCA_900445105.1	GCA_900445105.1_00413	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	UAPS01000002.1	330725	332839
GCA_019928825.1	GCA_019928825.1_00394	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHZOP010000001.1	394427	396346
GCA_001807345.1	GCA_001807345.1_01800	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	220	212	96.70	45.63	206	CAC86907.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	KV788588.1	377506	378168
GCA_001807345.1	GCA_001807345.1_01801	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV788588.1	378219	379640
GCA_001570825.1	GCA_001570825.1_00411	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	394	391	99.74	64.03	392	WP_005297378.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	BCSK01000007.1	4516	5700
GCA_001570825.1	GCA_001570825.1_01122	helR	RNA polymerase recycling motor ATPase HelR	plus	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	780	722	97.51	64.21	746	CCA59315.1	RNA polymerase recycling motor ATPase HelR	NF041254.1	RNA polymerase recycling motor ATPase HelR	BCSK01000018.1	56506	58848
GCA_001570825.1	GCA_001570825.1_02033	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	136	150	84.00	51.16	129	WP_063857695.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	BCSK01000032.1	54403	54813
GCA_001570825.1	GCA_001570825.1_03383	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	477	631	73.69	44.33	476	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	BCSK01000059.1	23901	25334
GCA_001570825.1	GCA_001570825.1_03384	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	224	218	93.12	50.98	204	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	BCSK01000059.1	25381	26055
GCA_003044395.1	GCA_003044395.1_00672	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	POWT01000005.1	81387	82766
GCA_009379565.1	GCA_009379565.1_01312	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCKP01000005.1	110675	111616
GCA_021172825.1	GCA_021172825.1_00350	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP089156.1	334917	335297
GCA_021172825.1	GCA_021172825.1_00351	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP089156.1	335287	337044
GCA_021172825.1	GCA_021172825.1_00352	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP089156.1	337151	337996
GCA_021172825.1	GCA_021172825.1_00377	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP089156.1	369824	371116
GCA_021172825.1	GCA_021172825.1_00423	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.06	238	ABD30999.1	serine protease SplE	NA	NA	CP089156.1	409981	410697
GCA_021172825.1	GCA_021172825.1_00436	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP089156.1	419680	420435
GCA_021172825.1	GCA_021172825.1_00437	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP089156.1	420474	421259
GCA_021172825.1	GCA_021172825.1_00438	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP089156.1	421413	422141
GCA_021172825.1	GCA_021172825.1_00439	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.65	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP089156.1	422176	422895
GCA_021172825.1	GCA_021172825.1_00674	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	98.72	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	CP089156.1	602400	603104
GCA_021172825.1	GCA_021172825.1_00702	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP089156.1	622407	622541
GCA_021172825.1	GCA_021172825.1_01028	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP089156.1	926643	927062
GCA_021172825.1	GCA_021172825.1_01124	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP089156.1	1021277	1022242
GCA_021172825.1	GCA_021172825.1_01125	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP089156.1	1022792	1023739
GCA_021172825.1	GCA_021172825.1_01126	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP089156.1	1023741	1024718
GCA_021172825.1	GCA_021172825.1_01333	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP089156.1	1247692	1249221
GCA_021172825.1	GCA_021172825.1_01368	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP089156.1	1290339	1291391
GCA_021172825.1	GCA_021172825.1_01501	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP089156.1	1437839	1439197
GCA_021172825.1	GCA_021172825.1_01692	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP089156.1	1661069	1662424
GCA_021172825.1	GCA_021172825.1_02066	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP089156.1	2027127	2027441
GCA_021172825.1	GCA_021172825.1_02067	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP089156.1	2027441	2028730
GCA_021172825.1	GCA_021172825.1_02068	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP089156.1	2028748	2029143
GCA_021172825.1	GCA_021172825.1_02093	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	CP089156.1	2047967	2049400
GCA_002096515.1	GCA_002096515.1_00317	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	NCUP01000009.1	323396	323824
GCA_002096515.1	GCA_002096515.1_01128	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	NCUP01000008.1	218385	220304
GCA_000478135.1	GCA_000478135.1_00522	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515758.1	553375	554229
GCA_000508285.1	GCA_000508285.1_01090	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP006958.1	1163921	1164208
GCA_000508285.1	GCA_000508285.1_01091	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP006958.1	1164219	1165907
GCA_000508285.1	GCA_000508285.1_02305	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	398	399	96.49	61.04	385	WP_000804064.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP006958.1	2514173	2515369
GCA_000508285.1	GCA_000508285.1_02596	catB	type B chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	210	98.10	81.55	206	WP_063843223.1	type B chloramphenicol O-acetyltransferase	NF000490.1	type B chloramphenicol O-acetyltransferase	CP006958.1	2826003	2826653
GCA_000508285.1	GCA_000508285.1_03459	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP006958.1	3799393	3800208
GCA_000508285.1	GCA_000508285.1_03606	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	261	266	97.74	42.15	261	WP_004861468.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	CP006958.1	3942500	3943285
GCA_000508285.1	GCA_000508285.1_04089	blaELC	ELC family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	HMM	430	450	100.00	87.78	450	WP_232734851.1	ELC family class C beta-lactamase	NF050047.1	ELC family class C beta-lactamase	CP006958.1	4457866	4459158
GCA_000508285.1	GCA_000508285.1_04191	blaOXA-114f	class D beta-lactamase OXA-114f	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	275	275	100.00	100.00	275	WP_024069684.1	class D beta-lactamase OXA-114f	NF033818.0	OXA-114 family class D beta-lactamase	CP006958.1	4589538	4590365
GCA_001546165.1	GCA_001546165.1_01049	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KQ955279.1	75664	77583
GCA_030913345.1	GCA_030913345.1_00522	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	98.74	78.83	392	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP133162.1	495308	496501
GCA_030913345.1	GCA_030913345.1_02782	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	407	392	100.00	74.74	392	WP_430673475.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP133162.1	2756380	2757603
GCA_030913345.1	GCA_030913345.1_03379	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	128	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP133163.1	9794	10180
GCA_030913345.1	GCA_030913345.1_03380	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	97.33	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP133163.1	10177	11862
GCA_030913345.1	GCA_030913345.1_03381	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	79.43	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP133163.1	11901	12326
GCA_030913345.1	GCA_030913345.1_03382	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP133163.1	13065	13520
GCA_016725205.1	GCA_016725205.1_01194	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.79	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP068216.1	1177289	1178581
GCA_016725205.1	GCA_016725205.1_01537	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	98.86	53.31	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP068216.1	1550611	1551678
GCA_016725205.1	GCA_016725205.1_02470	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.20	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP068217.1	19586	20875
GCA_016725205.1	GCA_016725205.1_02471	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	129	131	85.50	97.32	112	AAA27589.1	thioredoxin-dependent arsenate reductase	NA	NA	CP068217.1	20947	21336
GCA_016725205.1	GCA_016725205.1_02536	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP068217.1	75424	76713
GCA_016725205.1	GCA_016725205.1_02566	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP068218.1	2202	3581
GCA_028326025.1	GCA_028326025.1_00678	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQMJZ010000001.1	443789	445006
GCA_028326025.1	GCA_028326025.1_00679	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQMJZ010000001.1	445126	446589
GCA_028326025.1	GCA_028326025.1_01138	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.32	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQMJZ010000003.1	52005	53741
GCA_028326025.1	GCA_028326025.1_01139	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.74	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQMJZ010000003.1	53743	55467
GCA_017304535.1	GCA_017304535.1_00436	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	392	393	100.00	88.80	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	JAFKME010000005.1	490637	491815
GCA_017304535.1	GCA_017304535.1_01397	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	282	303	91.75	57.65	281	WP_063857820.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	JAFKME010000016.1	15466	16314
GCA_017304535.1	GCA_017304535.1_01755	aph(6)-I	APH(6)-I family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	269	270	99.26	74.63	268	WP_012480135.1	APH(6)-I family aminoglycoside O-phosphotransferase	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAFKME010000008.1	95653	96462
GCA_017304535.1	GCA_017304535.1_01928	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	346	345	95.94	35.80	338	WP_063842277.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAFKME010000017.1	27353	28393
GCA_017304535.1	GCA_017304535.1_02367	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	346	345	93.91	35.87	329	WP_063842277.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAFKME010000003.1	476430	477470
GCA_017304535.1	GCA_017304535.1_02431	blaCESS	CESS family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	HMM	296	297	99.66	72.30	296	WP_062166693.1	CESS family extended-spectrum class A beta-lactamase	NF050797.1	CESS family extended-spectrum class A beta-lactamase	JAFKME010000003.1	556854	557744
GCA_017304535.1	GCA_017304535.1_02719	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	414	396	99.75	67.17	396	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	JAFKME010000004.1	92229	93473
GCA_019931005.1	GCA_019931005.1_00501	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	97.58	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	CP082858.1	519929	521668
GCA_019931005.1	GCA_019931005.1_00502	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	92.92	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	CP082858.1	521665	523404
GCA_023523715.1	GCA_023523715.1_02164	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	133	95.49	58.59	128	WP_010989789.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP053180.1	2250136	2250546
GCA_023523715.1	GCA_023523715.1_02406	vanC	D-alanine--D-serine ligase VanC2/3	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	350	350	100.00	99.71	350	WP_063856670.1	D-alanine--D-serine ligase VanC2/3	NF012214.1	D-alanine--D-serine ligase VanC	CP053180.1	2467664	2468716
GCA_023523715.1	GCA_023523715.1_02407	vanXY-C	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	190	190	100.00	99.47	190	WP_010749757.1	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	NF000380.1	D,D-carboxypeptidase/D,D-dipeptidase VanXY	CP053180.1	2468713	2469285
GCA_023523715.1	GCA_023523715.1_02408	vanTc	membrane-bound serine racemase VanT	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	700	700	100.00	98.14	700	WP_063856759.1	membrane-bound serine racemase VanT	NF033132.1	membrane-bound serine racemase VanT	CP053180.1	2469282	2471384
GCA_023523715.1	GCA_023523715.1_02409	vanR-C	vancomycin resistance response regulator transcription factor VanR-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	231	231	100.00	99.57	231	WP_005228837.1	vancomycin resistance response regulator transcription factor VanR-C	NF000403.1	vancomycin resistance response regulator transcription factor VanR-C	CP053180.1	2471483	2472178
GCA_023523715.1	GCA_023523715.1_02410	vanS-C	vancomycin resistance histidine kinase VanS-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	376	376	100.00	99.20	376	WP_034869172.1	vancomycin resistance histidine kinase VanS-C	NF033091.0	vancomycin resistance histidine kinase VanS	CP053180.1	2472168	2473298
GCA_017655785.1	GCA_017655785.1_00138	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.78	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP040418.1	125992	127635
GCA_017655785.1	GCA_017655785.1_00548	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040418.1	526391	526765
GCA_029893715.1	GCA_029893715.1_00551	taeA	ABC-F type ribosomal protection protein TaeA	core	AMR	AMR	PLEUROMUTILIN	TIAMULIN	BLASTP	651	648	100.00	91.55	651	WP_071223118.1	ABC-F type ribosomal protection protein TaeA	NA	NA	JARXYU010000001.1	552939	554894
GCA_029893715.1	GCA_029893715.1_00727	tetB(58)	tetracycline efflux ABC transporter Tet(58) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	271	271	100.00	91.88	271	WP_071223302.1	tetracycline efflux ABC transporter Tet(58) subunit B	NA	NA	JARXYU010000001.1	749546	750361
GCA_029893715.1	GCA_029893715.1_01510	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	99.25	47.21	269	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	JARXYU010000002.1	503598	504407
GCA_029893715.1	GCA_029893715.1_01586	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	211	212	99.53	75.83	211	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	JARXYU010000002.1	576766	577401
GCA_029893715.1	GCA_029893715.1_01724	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family A	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	175	169	97.63	64.24	165	AIQ64103.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	NF040503.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	JARXYU010000002.1	738888	739415
GCA_029893715.1	GCA_029893715.1_02787	aac(2)-IIb	kasugamycin N-acetyltransferase AAC(2)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	HMM	239	240	99.58	66.53	239	WP_071224044.1	kasugamycin N-acetyltransferase AAC(2)-IIb	NF033472.1	kasugamycin N-acetyltransferase AAC(2)-IIb	JARXYU010000005.1	43974	44693
GCA_029893715.1	GCA_029893715.1_03181	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	97.56	44.29	280	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JARXYU010000006.1	115219	116082
GCA_029893715.1	GCA_029893715.1_04450	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	312	304	91.78	67.13	286	WP_087344360.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	JARXYU010000011.1	161541	162479
GCA_029893715.1	GCA_029893715.1_05591	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	67.59	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JARXYU010000019.1	89763	90413
GCA_029893715.1	GCA_029893715.1_05782	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	107	99.07	46.23	106	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JARXYU010000021.1	76415	76774
GCA_023109175.1	GCA_023109175.1_00904	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JALGPN010000001.1	921824	922555
GCA_023109175.1	GCA_023109175.1_01493	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALGPN010000003.1	155982	157901
GCA_008728775.1	GCA_008728775.1_01664	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP041726.1	1643017	1643436
GCA_008728775.1	GCA_008728775.1_02246	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP041726.1	2207485	2208558
GCA_008728775.1	GCA_008728775.1_02385	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP041726.1	2358574	2359866
GCA_003992005.1	GCA_003992005.1_00256	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.22	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RQVL01000002.1	479	2398
GCA_003992005.1	GCA_003992005.1_01117	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RQVL01000012.1	9681	10418
GCA_003992005.1	GCA_003992005.1_01120	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	RQVL01000012.1	12080	12874
GCA_003992005.1	GCA_003992005.1_01121	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	RQVL01000012.1	12967	13509
GCA_003992005.1	GCA_003992005.1_01122	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	261	245	100.00	100.00	245	WP_011861426.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RQVL01000012.1	13847	14632
GCA_900635795.1	GCA_900635795.1_01221	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.14	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LR134168.1	1213254	1214648
GCA_003049525.1	GCA_003049525.1_00132	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	215	100.00	68.84	215	WP_035203840.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	PYWL01000011.1	22283	22930
GCA_003049525.1	GCA_003049525.1_02190	vanR	VanR-ABDEGLN family response regulator transcription factor	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	228	232	98.71	71.74	230	WP_011461303.1	VanR-ABDEGLN family response regulator transcription factor	NF033117.2	VanR-ABDEGLN family response regulator transcription factor	PYWL01000002.1	38909	39595
GCA_003049525.1	GCA_003049525.1_02753	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	148	97.30	55.56	144	WP_128470137.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	PYWL01000002.1	596741	597175
GCA_003049525.1	GCA_003049525.1_03798	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	80.69	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	PYWL01000004.1	340768	342246
GCA_003049525.1	GCA_003049525.1_03973	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	141	142	97.18	77.54	138	WP_204376221.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	PYWL01000005.1	134660	135085
GCA_003049525.1	GCA_003049525.1_04070	msr	Msr family ABC-F type ribosomal protection protein	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	482	485	99.18	72.35	481	WP_101035417.1	Msr family ABC-F type ribosomal protection protein	NF000168.2	Msr family ABC-F type ribosomal protection protein	PYWL01000005.1	212557	214005
GCA_030545605.1	GCA_030545605.1_00665	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAUOMI010000001.1	582892	584109
GCA_030545605.1	GCA_030545605.1_00666	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAUOMI010000001.1	584229	585692
GCA_013276405.1	GCA_013276405.1_00471	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	99.73	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMKY01000014.1	744	1877
GCA_002096155.1	GCA_002096155.1_00135	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP020735.1	145602	146894
GCA_002096155.1	GCA_002096155.1_02018	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP020735.1	2033927	2034346
GCA_002096155.1	GCA_002096155.1_02104	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP020735.1	2116549	2116929
GCA_002096155.1	GCA_002096155.1_02105	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP020735.1	2116919	2118676
GCA_002096155.1	GCA_002096155.1_02106	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP020735.1	2118783	2119628
GCA_002096155.1	GCA_002096155.1_02441	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP020735.1	2461056	2461697
GCA_002096155.1	GCA_002096155.1_02541	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP020735.1	2555082	2556155
GCA_002096155.1	GCA_002096155.1_02570	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	137	131	90.84	92.44	119	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP020735.1	2584078	2584491
GCA_000506565.2	GCA_000506565.2_02336	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	153	147	97.28	46.53	144	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	AYQC01000019.1	383130	383591
GCA_000743455.1	GCA_000743455.1_03238	blaOXA	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	271	271	100.00	98.15	271	WP_063864500.1	carbapenem-hydrolyzing class D beta-lactamase OXA-60	NF000395.3	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	KN050646.1	3399674	3400489
GCA_000743455.1	GCA_000743455.1_03747	blaOXA	OXA-22 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	275	274	99.64	96.70	273	WP_063861776.1	benzylpenicillin-hydrolyzing class D beta-lactamase OXA-22	NF033509.1	OXA-22 family class D beta-lactamase	KN050646.1	3965488	3966315
GCA_000743455.1	GCA_000743455.1_04459	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	KN050646.1	4751277	4751513
GCA_000743455.1	GCA_000743455.1_04460	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	KN050646.1	4751510	4751875
GCA_000743455.1	GCA_000743455.1_04461	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KN050646.1	4751893	4753578
GCA_000743455.1	GCA_000743455.1_04462	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	KN050646.1	4753650	4753925
GCA_000743455.1	GCA_000743455.1_04463	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	KN050646.1	4753938	4754288
GCA_000743455.1	GCA_000743455.1_04464	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	KN050646.1	4754360	4754794
GCA_001999385.1	GCA_001999385.1_01375	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	483	513	94.15	96.69	483	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	MTGK01000048.1	7687	9138
GCA_001999385.1	GCA_001999385.1_01597	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	MTGK01000053.1	985	2160
GCA_001999385.1	GCA_001999385.1_01632	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	MTGK01000056.1	731	2512
GCA_001999385.1	GCA_001999385.1_01928	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.13	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	MTGK01000063.1	26780	27634
GCA_001999385.1	GCA_001999385.1_01933	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	MTGK01000063.1	32094	33515
GCA_003626155.1	GCA_003626155.1_01281	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZGZ01000004.1	101668	102609
GCA_030176335.1	GCA_030176335.1_01240	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUI010000035.1	385	1239
GCA_003043945.1	GCA_003043945.1_00509	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	PYXG01000001.1	555586	557511
GCA_000691525.1	GCA_000691525.1_01089	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	391	392	95.66	62.47	381	WP_003971483.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	JMDW01000005.1	237453	238628
GCA_000691525.1	GCA_000691525.1_02479	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	294	98.98	65.76	295	WP_063842628.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JMDW01000009.1	100756	101667
GCA_000691525.1	GCA_000691525.1_03742	tet(V)	tetracycline efflux MFS transporter Tet(V)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	416	419	98.09	67.40	411	WP_003896589.1	tetracycline efflux MFS transporter Tet(V)	NF012178.0	tetracycline efflux MFS transporter Tet(V)	JMDW01000012.1	219590	220840
GCA_001700965.1	GCA_001700965.1_00010	copA	laccase-like oxidase CopA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	623	623	100.00	98.88	623	ADR70747.1	laccase-like oxidase CopA	NA	NA	CP016756.1	8257	10128
GCA_001700965.1	GCA_001700965.1_00011	copB	copper-binding protein CopB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	425	422	100.00	94.59	425	ADR70748.1	copper-binding protein CopB	NA	NA	CP016756.1	10125	11402
GCA_001700965.1	GCA_001700965.1_00851	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	153	155	97.42	58.28	151	WP_262697082.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP016756.1	948589	949050
GCA_001700965.1	GCA_001700965.1_00962	blaCESS-1	extended-spectrum class A beta-lactamase CESS-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	297	297	100.00	100.00	297	WP_062166693.1	extended-spectrum class A beta-lactamase CESS-1	NF050797.1	CESS family extended-spectrum class A beta-lactamase	CP016756.1	1098911	1099804
GCA_001700965.1	GCA_001700965.1_01200	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	290	289	97.92	43.82	283	WP_063859390.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	CP016756.1	1392354	1393226
GCA_001700965.1	GCA_001700965.1_02993	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	276	141	96.45	58.82	136	AAB09628.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP016756.1	3451960	3452790
GCA_028607005.1	GCA_028607005.1_00811	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	111	107	96.26	55.24	105	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP117295.1	846403	846738
GCA_019973735.1	GCA_019973735.1_01017	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	381	70.60	45.35	269	WP_009950391.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	AP024463.1	1095937	1096785
GCA_000009865.1	GCA_000009865.1_00086	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	AP006716.1	98075	100081
GCA_000009865.1	GCA_000009865.1_00095	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	AP006716.1	105997	106398
GCA_000009865.1	GCA_000009865.1_00096	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP006716.1	106416	107705
GCA_000009865.1	GCA_000009865.1_00103	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP006716.1	112916	114208
GCA_000009865.1	GCA_000009865.1_00107	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	44.63	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP006716.1	116373	116720
GCA_000009865.1	GCA_000009865.1_00192	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP006716.1	193685	194977
GCA_000009865.1	GCA_000009865.1_01677	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	AP006716.1	1655142	1656581
GCA_000009865.1	GCA_000009865.1_01832	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AP006716.1	1827291	1827671
GCA_000009865.1	GCA_000009865.1_01833	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AP006716.1	1827661	1829418
GCA_000009865.1	GCA_000009865.1_01834	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AP006716.1	1829525	1830370
GCA_000009865.1	GCA_000009865.1_02381	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	AP006716.1	2333752	2335218
GCA_000009865.1	GCA_000009865.1_02382	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	AP006716.1	2335317	2336216
GCA_000009865.1	GCA_000009865.1_02767	fosB1	fosfomycin resistance bacillithiol transferase FosB1	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_011276918.1	fosfomycin resistance bacillithiol transferase FosB1	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	AP006717.1	122	541
GCA_000009865.1	GCA_000009865.1_02769	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_011276921.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	AP006718.1	319	1053
GCA_020554345.1	GCA_020554345.1_01467	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAJCHG010000004.1	60781	62244
GCA_020554345.1	GCA_020554345.1_01468	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAJCHG010000004.1	62364	63581
GCA_003944305.1	GCA_003944305.1_00494	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420317.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJPO01000002.1	177106	178569
GCA_003944305.1	GCA_003944305.1_00495	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.51	405	WP_000417517.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJPO01000002.1	178689	179906
GCA_004354345.1	GCA_004354345.1_02094	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	283	289	96.54	43.37	279	WP_063859390.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	CP037913.1	2239832	2240683
GCA_004354345.1	GCA_004354345.1_03911	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	144	144	100.00	69.44	144	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP037915.1	116934	117368
GCA_001556605.1	GCA_001556605.1_01209	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	LSJE01000036.1	24529	25992
GCA_001556605.1	GCA_001556605.1_01210	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	LSJE01000036.1	26112	27329
GCA_003294055.1	GCA_003294055.1_00528	blaOXA	OXA-1043 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	100.00	84.39	269	WP_077021671.1	OXA-1043 family class D beta-lactamase	NF040600.1	OXA-1043 family class D beta-lactamase	QMFZ01000012.1	151766	152575
GCA_003294055.1	GCA_003294055.1_00999	ant(3)	ANT(3)-I family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	HMM	288	262	98.85	63.32	259	WP_071846244.1	ANT(3)-I family aminoglycoside nucleotidyltransferase	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	QMFZ01000015.1	87726	88592
GCA_003294055.1	GCA_003294055.1_01101	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	294	99.32	55.78	294	WP_025370306.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	QMFZ01000016.1	22164	23063
GCA_003294055.1	GCA_003294055.1_01729	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	389	408	92.16	57.03	377	WP_322881141.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	QMFZ01000001.1	77232	78401
GCA_003294055.1	GCA_003294055.1_03434	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	411	396	98.48	88.46	390	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	QMFZ01000029.1	33530	34765
GCA_003294055.1	GCA_003294055.1_04752	norM	multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	462	462	99.78	91.97	461	AAG27731.1	multidrug efflux MATE transporter NorM	NA	NA	QMFZ01000003.1	25982	27370
GCA_003294055.1	GCA_003294055.1_06848	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	84.62	52.07	121	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	QMFZ01000068.1	22062	22457
GCA_003294055.1	GCA_003294055.1_07011	blaPEN-bcc	PEN family class A beta-lactamase, Bcc-type	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	312	312	100.00	97.76	312	WP_027789588.1	PEN family class A beta-lactamase, Bcc-type	NF000320.3	PEN family class A beta-lactamase, Bcc-type	QMFZ01000006.1	137163	138101
GCA_905187725.1	GCA_905187725.1_01641	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CAJJJA010000004.1	294269	296188
GCA_030585205.1	GCA_030585205.1_04805	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	270	272	99.26	68.89	270	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP126034.1	5188932	5189744
GCA_030585205.1	GCA_030585205.1_06588	blaBJP	BJP family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	295	294	99.66	85.32	293	WP_011088970.1	BJP family subclass B3 metallo-beta-lactamase	NF012140.0	BJP family subclass B3 metallo-beta-lactamase	CP126034.1	7001442	7002329
GCA_030585205.1	GCA_030585205.1_06645	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	305	97.38	54.21	297	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP126034.1	7069874	7070773
GCA_000724645.1	GCA_000724645.1_00433	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.91	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JMRV01000042.1	7916	9640
GCA_000724645.1	GCA_000724645.1_00434	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.88	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JMRV01000042.1	9642	11378
GCA_000724645.1	GCA_000724645.1_01364	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JMRV01000014.1	15591	17510
GCA_000724645.1	GCA_000724645.1_01365	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JMRV01000014.1	18619	19356
GCA_963393065.1	GCA_963393065.1_00117	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJOA010000001.1	137473	138336
GCA_963393065.1	GCA_963393065.1_00118	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJOA010000001.1	138353	139591
GCA_963393065.1	GCA_963393065.1_00235	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.55	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJOA010000002.1	39245	40624
GCA_963393065.1	GCA_963393065.1_00827	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJOA010000005.1	71591	73117
GCA_963393065.1	GCA_963393065.1_01684	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJOA010000014.1	24711	25616
GCA_000382825.1	GCA_000382825.1_00550	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAUK01000004.1	399802	401019
GCA_000382825.1	GCA_000382825.1_00551	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAUK01000004.1	401139	402602
GCA_000382825.1	GCA_000382825.1_00561	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CAUK01000004.1	410491	410919
GCA_001838215.1	GCA_001838215.1_00863	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV836063.1	55	1836
GCA_001838215.1	GCA_001838215.1_01597	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	200	267	74.91	99.50	200	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	KV836077.1	621	1223
GCA_001838215.1	GCA_001838215.1_01598	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	KV836077.1	1223	2059
GCA_001838215.1	GCA_001838215.1_01600	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	KV836077.1	2263	3438
GCA_001838215.1	GCA_001838215.1_01765	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	KV836081.1	126	941
GCA_001838215.1	GCA_001838215.1_01848	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV836084.1	66900	68321
GCA_001838215.1	GCA_001838215.1_01852	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV836084.1	70043	70897
GCA_024129415.1	GCA_024129415.1_01485	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	146	144	88.89	51.16	129	KTT96020.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	JAMXYE010000002.1	320446	320886
GCA_024129415.1	GCA_024129415.1_03043	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	294	97.28	42.28	298	WP_006027381.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAMXYE010000005.1	23832	24731
GCA_916439165.1	GCA_916439165.1_01421	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAKAHK010000002.1	1307220	1308185
GCA_025152445.1	GCA_025152445.1_00682	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALXXQ010000012.1	4936	5355
GCA_025152445.1	GCA_025152445.1_00817	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALXXQ010000015.1	87	467
GCA_025152445.1	GCA_025152445.1_00818	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALXXQ010000015.1	457	2214
GCA_025152445.1	GCA_025152445.1_00819	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALXXQ010000015.1	2321	3166
GCA_025152445.1	GCA_025152445.1_00976	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALXXQ010000002.1	140789	142081
GCA_025152445.1	GCA_025152445.1_01110	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALXXQ010000002.1	284724	285797
GCA_016889165.1	GCA_016889165.1_00649	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP069473.1	644132	646138
GCA_016889165.1	GCA_016889165.1_00650	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP069473.1	646238	647224
GCA_016889165.1	GCA_016889165.1_00669	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP069473.1	666683	667972
GCA_016889165.1	GCA_016889165.1_00743	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP069473.1	750664	751092
GCA_016889165.1	GCA_016889165.1_01446	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP069473.1	1470263	1471108
GCA_016889165.1	GCA_016889165.1_01447	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP069473.1	1471215	1472972
GCA_016889165.1	GCA_016889165.1_01448	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP069473.1	1472962	1473342
GCA_016889165.1	GCA_016889165.1_02445	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP069474.1	1579	2424
GCA_016889165.1	GCA_016889165.1_02448	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP069474.1	3771	5150
GCA_016889165.1	GCA_016889165.1_02453	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP069474.1	8216	9760
GCA_016889165.1	GCA_016889165.1_02470	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP069474.1	23535	24278
GCA_016889165.1	GCA_016889165.1_02471	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP069474.1	24501	24899
GCA_016889165.1	GCA_016889165.1_02478	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP069474.1	30244	30624
GCA_016889165.1	GCA_016889165.1_02509	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	522	522	100.00	99.81	522	WP_032492560.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP069477.1	1527	3095
GCA_016889165.1	GCA_016889165.1_02513	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003260.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP069478.1	25	759
GCA_009716795.1	GCA_009716795.1_00294	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	WMXI01000001.1	290690	291118
GCA_030503485.1	GCA_030503485.1_00051	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JAUKOW010000012.1	4260	7334
GCA_030503485.1	GCA_030503485.1_00058	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAUKOW010000012.1	15935	16495
GCA_030503485.1	GCA_030503485.1_00059	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAUKOW010000012.1	16679	18223
GCA_030503485.1	GCA_030503485.1_00077	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JAUKOW010000015.1	2162	2812
GCA_030503485.1	GCA_030503485.1_01135	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAUKOW010000002.1	446733	447080
GCA_030503485.1	GCA_030503485.1_01138	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAUKOW010000002.1	449248	450537
GCA_030644245.1	GCA_030644245.1_02262	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP128651.1	2202431	2203723
GCA_030644245.1	GCA_030644245.1_02345	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP128651.1	2278585	2279877
GCA_030644245.1	GCA_030644245.1_02346	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP128651.1	2279895	2280287
GCA_030644245.1	GCA_030644245.1_02366	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP128651.1	2298798	2300087
GCA_030644245.1	GCA_030644245.1_02367	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP128651.1	2300105	2300506
GCA_003493045.1	GCA_003493045.1_00477	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQLC01000002.1	75784	76689
GCA_003493045.1	GCA_003493045.1_01813	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	99.41	95.05	505	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQLC01000015.1	14773	16299
GCA_003493045.1	GCA_003493045.1_01944	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	283	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQLC01000018.1	18064	18915
GCA_003493045.1	GCA_003493045.1_01945	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQLC01000018.1	18945	20183
GCA_001650475.1	GCA_001650475.1_01571	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	LWCQ01000012.1	574489	575562
GCA_001650475.1	GCA_001650475.1_01621	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	LWCQ01000012.1	634762	635184
GCA_001650475.1	GCA_001650475.1_02096	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LWCQ01000027.1	60623	61912
GCA_001650475.1	GCA_001650475.1_02404	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LWCQ01000030.1	33915	34262
GCA_001650475.1	GCA_001650475.1_02408	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LWCQ01000030.1	37945	39237
GCA_001650475.1	GCA_001650475.1_02409	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	LWCQ01000030.1	39254	39649
GCA_000292915.1	GCA_000292915.1_02471	norM	multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	462	462	100.00	93.51	462	AAG27731.1	multidrug efflux MATE transporter NorM	NA	NA	CP003774.1	2662017	2663405
GCA_000292915.1	GCA_000292915.1_03566	blaPEN-F	PEN-F family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	297	297	100.00	91.58	297	WP_011659342.1	PEN-F family class A beta-lactamase	NF000320.3	PEN family class A beta-lactamase, Bcc-type	CP003775.1	365490	366383
GCA_000292915.1	GCA_000292915.1_03917	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	99.67	56.81	301	WP_105807557.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP003775.1	730626	731525
GCA_000292915.1	GCA_000292915.1_05387	blaOXA	OXA-1043 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	268	98.88	84.21	266	WP_077021671.1	OXA-1043 family class D beta-lactamase	NF040600.1	OXA-1043 family class D beta-lactamase	CP003775.1	2377798	2378703
GCA_022688945.1	GCA_022688945.1_01507	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCYG010000003.1	173447	174739
GCA_022688945.1	GCA_022688945.1_02387	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	69.57	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCYG010000008.1	78721	79140
GCA_900111835.1	GCA_900111835.1_00878	blaPOM	POM family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	286	286	100.00	99.30	286	WP_044403015.1	subclass B3 metallo-beta-lactamase POM-1	NF000438.2	POM family subclass B3 metallo-beta-lactamase	FOJP01000012.1	81655	82515
GCA_900111835.1	GCA_900111835.1_00954	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	414	100.00	75.00	416	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	FOJP01000012.1	158353	159594
GCA_900111835.1	GCA_900111835.1_01045	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	49.45	91	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	FOJP01000008.1	4047	4322
GCA_900111835.1	GCA_900111835.1_02380	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	260	259	99.61	41.76	261	WP_014386410.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	FOJP01000011.1	40035	40817
GCA_900111835.1	GCA_900111835.1_03986	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	213	221	95.02	68.57	210	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	FOJP01000007.1	217925	218566
GCA_900111835.1	GCA_900111835.1_05817	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	98.35	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	FOJP01000034.1	174	539
GCA_900111835.1	GCA_900111835.1_05818	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	FOJP01000034.1	536	772
GCA_900111835.1	GCA_900111835.1_05867	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	81	81	100.00	100.00	81	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	FOJP01000041.1	439	684
GCA_900111835.1	GCA_900111835.1_05868	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	98.90	93.33	90	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	FOJP01000041.1	687	962
GCA_900111835.1	GCA_900111835.1_05869	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	AAA98222.1	mercuric transport protein MerT	NA	NA	FOJP01000041.1	978	1328
GCA_900111835.1	GCA_900111835.1_05870	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	94.44	144	AAC38229.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	FOJP01000041.1	1400	1834
GCA_916438355.1	GCA_916438355.1_01301	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	285	284	100.00	94.39	285	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAKAEO010000008.1	190932	191789
GCA_001949885.1	GCA_001949885.1_00208	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	MPJK01000001.1	200744	201604
GCA_002156725.1	GCA_002156725.1_00070	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.24	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP020837.1	69460	70644
GCA_002156725.1	GCA_002156725.1_00212	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP020837.1	214316	215218
GCA_002156725.1	GCA_002156725.1_00767	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	98.56	139	WP_004146118.1	FosA5 family fosfomycin resistance glutathione transferase	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP020837.1	786207	786626
GCA_002156725.1	GCA_002156725.1_01868	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	100.00	99.76	410	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP020837.1	1909253	1910485
GCA_002156725.1	GCA_002156725.1_02396	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206356.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP020837.1	2434447	2435226
GCA_002156725.1	GCA_002156725.1_02397	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP020837.1	2435390	2435737
GCA_002156725.1	GCA_002156725.1_02398	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP020837.1	2435731	2436570
GCA_002156725.1	GCA_002156725.1_02719	blaSHV-11	broad-spectrum class A beta-lactamase SHV-11	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_004176269.1	broad-spectrum class A beta-lactamase SHV-11	NF000285.3	SHV family class A beta-lactamase	CP020837.1	2751511	2752371
GCA_002156725.1	GCA_002156725.1_03145	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	116	102	100.00	56.91	123	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP020837.1	3174527	3174877
GCA_002156725.1	GCA_002156725.1_03636	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.50	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP020837.1	3666136	3667938
GCA_002156725.1	GCA_002156725.1_03637	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	570	600	95.00	99.65	570	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP020837.1	3667925	3669637
GCA_002156725.1	GCA_002156725.1_03669	clbN	colibactin non-ribosomal peptide synthetase ClbN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1455	1455	100.00	100.00	1455	AMH08480.1	colibactin non-ribosomal peptide synthetase ClbN	NA	NA	CP020837.1	3717867	3722234
GCA_002156725.1	GCA_002156725.1_03681	clbB	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	3206	3206	100.00	100.00	3206	AMQ58400.1	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	NA	NA	CP020837.1	3752330	3761950
GCA_002156725.1	GCA_002156725.1_04335	oqxA	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	EXACTP	391	391	100.00	100.00	391	WP_002914189.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NF000272.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	CP020837.1	4444708	4445883
GCA_002156725.1	GCA_002156725.1_04336	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	EXACTP	1050	1050	100.00	100.00	1050	WP_000347934.1	multidrug efflux RND transporter permease subunit OqxB	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP020837.1	4445907	4449059
GCA_002156725.1	GCA_002156725.1_04672	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	140	141	98.58	78.42	139	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP020837.1	4785554	4785976
GCA_002156725.1	GCA_002156725.1_05508	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	182	189	96.30	99.45	182	CDY80020.1	small heat shock protein sHSP20	NA	NA	CP020838.1	9429	9977
GCA_002156725.1	GCA_002156725.1_05523	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP020838.1	22616	23431
GCA_002156725.1	GCA_002156725.1_05525	mph(A)	Mph(A) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	301	301	100.00	100.00	301	WP_000219391.1	Mph(A) family macrolide 2-phosphotransferase	NF000254.1	Mph(A) family macrolide 2-phosphotransferase	CP020838.1	24408	25313
GCA_002156725.1	GCA_002156725.1_05532	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP020838.1	30624	31463
GCA_002156725.1	GCA_002156725.1_05533	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP020838.1	31457	31804
GCA_002156725.1	GCA_002156725.1_05534	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206356.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP020838.1	31968	32747
GCA_002156725.1	GCA_002156725.1_05535	dfrA12	trimethoprim-resistant dihydrofolate reductase DfrA12	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_001083725.1	trimethoprim-resistant dihydrofolate reductase DfrA12	NF000053.2	trimethoprim-resistant dihydrofolate reductase DfrA12	CP020838.1	33167	33664
GCA_002156725.1	GCA_002156725.1_05542	catA1	type A-1 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	219	219	100.00	100.00	219	WP_000412211.1	type A-1 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP020838.1	39675	40334
GCA_002156725.1	GCA_002156725.1_05671	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	91.61	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP020838.1	167722	168153
GCA_002156725.1	GCA_002156725.1_05672	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	491	491	100.00	100.00	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP020838.1	168404	169879
GCA_002156725.1	GCA_002156725.1_05673	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	226	226	100.00	100.00	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP020838.1	169872	170552
GCA_002156725.1	GCA_002156725.1_05674	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	461	461	100.00	100.00	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP020838.1	170742	172127
GCA_002156725.1	GCA_002156725.1_05675	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP020838.1	172156	172509
GCA_002156725.1	GCA_002156725.1_05676	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	97.67	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP020838.1	172623	173915
GCA_002156725.1	GCA_002156725.1_05677	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.85	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP020838.1	173926	177072
GCA_002156725.1	GCA_002156725.1_05679	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	94.49	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP020838.1	177726	180173
GCA_002156725.1	GCA_002156725.1_05683	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	EXACTP	605	605	100.00	100.00	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP020838.1	182154	183971
GCA_002156725.1	GCA_002156725.1_05684	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP020838.1	183971	184867
GCA_002156725.1	GCA_002156725.1_05685	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP020838.1	184907	185287
GCA_002156725.1	GCA_002156725.1_05686	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	BLASTP	309	309	100.00	99.68	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP020838.1	185292	186221
GCA_002156725.1	GCA_002156725.1_05687	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP020838.1	186276	186956
GCA_002156725.1	GCA_002156725.1_05688	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.14	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP020838.1	186953	188353
GCA_002156725.1	GCA_002156725.1_05689	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	94.44	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	CP020838.1	188570	189004
GCA_002156725.1	GCA_002156725.1_05700	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	141	141	100.00	100.00	141	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP020838.1	197040	197465
GCA_002156725.1	GCA_002156725.1_05701	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	429	429	100.00	100.00	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP020838.1	197478	198767
GCA_002156725.1	GCA_002156725.1_05702	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	583	583	100.00	100.00	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP020838.1	198815	200566
GCA_002156725.1	GCA_002156725.1_05703	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	91.67	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP020838.1	200584	200946
GCA_002156725.1	GCA_002156725.1_05704	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	116	116	100.00	100.00	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP020838.1	200996	201346
GCA_002156725.1	GCA_002156725.1_05721	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	931	949	97.89	99.25	929	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP020838.1	210792	213587
GCA_002156725.1	GCA_002156725.1_05722	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	EXACTP	189	189	100.00	100.00	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	CP020838.1	213702	214271
GCA_002156725.1	GCA_002156725.1_05739	mph(A)	Mph(A) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	PARTIALP	216	301	63.79	100.00	192	WP_000219391.1	Mph(A) family macrolide 2-phosphotransferase	NA	NA	CP020838.1	226816	227466
GCA_002156725.1	GCA_002156725.1_05765	blaSHV-12	extended-spectrum class A beta-lactamase SHV-12	core	AMR	AMR	BETA-LACTAM	CEFIDEROCOL/CEPHALOSPORIN	ALLELEP	286	286	100.00	100.00	286	WP_002904004.1	extended-spectrum class A beta-lactamase SHV-12	NF000285.3	SHV family class A beta-lactamase	CP020839.1	18443	19303
GCA_002156725.1	GCA_002156725.1_05814	aac(6)-Ib	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	BLASTP	201	184	100.00	100.00	184	WP_063840280.1	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP020840.1	307	912
GCA_002849795.1	GCA_002849795.1_00082	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP023863.1	101092	102282
GCA_018786185.1	GCA_018786185.1_00388	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	WQRD01000012.1	7189	9114
GCA_018786185.1	GCA_018786185.1_01173	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	322	300	96.00	51.39	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	WQRD01000025.1	69642	70610
GCA_003252655.1	GCA_003252655.1_01627	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QEPL01000007.1	5731	7125
GCA_000165835.1	GCA_000165835.1_01076	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP002287.1	1147016	1147303
GCA_000165835.1	GCA_000165835.1_01077	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP002287.1	1147314	1149002
GCA_000165835.1	GCA_000165835.1_02536	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	147	153	96.08	61.90	147	WP_104467712.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP002287.1	2686565	2687008
GCA_000165835.1	GCA_000165835.1_03628	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	393	399	95.24	76.05	380	WP_000804064.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP002287.1	3887634	3888815
GCA_000165835.1	GCA_000165835.1_04296	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	383	396	95.71	68.41	383	WP_280147732.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP002287.1	4602380	4603531
GCA_029691935.1	GCA_029691935.1_00158	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP121527.1	141807	142448
GCA_029691935.1	GCA_029691935.1_00182	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121527.1	168805	169650
GCA_029691935.1	GCA_029691935.1_00183	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.46	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121527.1	169757	171514
GCA_029691935.1	GCA_029691935.1_00184	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121527.1	171504	171884
GCA_029691935.1	GCA_029691935.1_01777	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121527.1	1777226	1778515
GCA_029691935.1	GCA_029691935.1_01886	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP121527.1	1897087	1897515
GCA_003355435.1	GCA_003355435.1_00024	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP031333.1	19702	21081
GCA_003355435.1	GCA_003355435.1_00788	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP031333.1	807723	808628
GCA_003355435.1	GCA_003355435.1_00909	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.06	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP031333.1	940094	941332
GCA_003355435.1	GCA_003355435.1_00910	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	135	210	64.29	98.52	135	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP031333.1	941735	942142
GCA_003355435.1	GCA_003355435.1_00912	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP031333.1	943191	944759
GCA_003355435.1	GCA_003355435.1_01137	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.02	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP031333.1	1170269	1171795
GCA_001058455.1	GCA_001058455.1_00008	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JUSN01000015.1	3219	4661
GCA_016027075.1	GCA_016027075.1_00017	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	302	99.34	54.13	303	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP065668.1	15956	16867
GCA_016027075.1	GCA_016027075.1_00044	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	268	96.64	69.88	259	WP_114268491.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP065668.1	48262	49062
GCA_016027075.1	GCA_016027075.1_02144	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	275	94.91	59.77	261	WP_125064048.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP065668.1	2389044	2389826
GCA_030176155.1	GCA_030176155.1_00821	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.78	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASNVS010000001.1	224269	225711
GCA_030176155.1	GCA_030176155.1_00899	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVS010000020.1	806	1660
GCA_024400855.1	GCA_024400855.1_02718	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	144	100.00	63.19	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP038802.1	2885537	2885971
GCA_009496385.1	GCA_009496385.1_01285	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.09	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	WIJZ01000003.1	204999	206894
GCA_009496385.1	GCA_009496385.1_01852	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	97.49	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJZ01000007.1	93743	94942
GCA_015679925.1	GCA_015679925.1_00453	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030826.1	458558	459937
GCA_015679925.1	GCA_015679925.1_01207	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP030826.1	1223455	1224360
GCA_015679925.1	GCA_015679925.1_01336	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030826.1	1359573	1360811
GCA_015679925.1	GCA_015679925.1_01337	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030826.1	1361219	1361851
GCA_015679925.1	GCA_015679925.1_01339	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030826.1	1362676	1364244
GCA_015679925.1	GCA_015679925.1_01529	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030826.1	1566343	1567869
GCA_021496015.1	GCA_021496015.1_00033	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP090912.1	36459	37748
GCA_021496015.1	GCA_021496015.1_00036	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP090912.1	39926	40273
GCA_021496015.1	GCA_021496015.1_00811	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP090912.1	845539	846384
GCA_021496015.1	GCA_021496015.1_00812	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP090912.1	846491	848248
GCA_021496015.1	GCA_021496015.1_00813	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	97.62	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP090912.1	848238	848618
GCA_943914275.1	GCA_943914275.1_02062	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CALUBK010000075.1	969	2393
GCA_943914275.1	GCA_943914275.1_02115	erm(36)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(36)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	CLINDAMYCIN/ERYTHROMYCIN	EXACTP	281	281	100.00	100.00	281	WP_015345217.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(36)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CALUBK010000088.1	1967	2812
GCA_943914275.1	GCA_943914275.1_02126	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CALUBK010000091.1	1824	2678
GCA_000173935.1	GCA_000173935.1_00183	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.93	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	ACEN01000104.1	27489	29057
GCA_003944125.1	GCA_003944125.1_00112	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RJOV01000001.1	109930	110667
GCA_003944125.1	GCA_003944125.1_00113	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RJOV01000001.1	111776	113695
GCA_027664685.1	GCA_027664685.1_00053	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAQDFL010000001.1	54590	55012
GCA_027664685.1	GCA_027664685.1_00105	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAQDFL010000001.1	114205	115278
GCA_027664685.1	GCA_027664685.1_00729	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAQDFL010000010.1	23528	23923
GCA_027664685.1	GCA_027664685.1_00730	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.74	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAQDFL010000010.1	23940	25232
GCA_027664685.1	GCA_027664685.1_00734	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQDFL010000010.1	28914	29261
GCA_027664685.1	GCA_027664685.1_02339	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAQDFL010000008.1	13201	14490
GCA_019704115.1	GCA_019704115.1_00586	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	AP024309.1	634775	635629
GCA_019704115.1	GCA_019704115.1_02171	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP024309.1	2328999	2329409
GCA_000613765.1	GCA_000613765.1_00923	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	BAJP01000017.1	16348	18273
GCA_000613765.1	GCA_000613765.1_01755	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	397	321	91.28	98.63	293	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	BAJP01000003.1	4456	5649
GCA_030845035.1	GCA_030845035.1_01618	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASNMI010000001.1	1662611	1664530
GCA_030845035.1	GCA_030845035.1_02256	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASNMI010000001.1	2341850	2343631
GCA_030845035.1	GCA_030845035.1_02269	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNMI010000001.1	2356493	2357347
GCA_030845035.1	GCA_030845035.1_02281	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASNMI010000001.1	2368133	2369575
GCA_003691405.1	GCA_003691405.1_00423	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP033098.1	463171	464463
GCA_003691405.1	GCA_003691405.1_02601	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP033100.1	20035	20778
GCA_003691405.1	GCA_003691405.1_02602	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP033100.1	21001	21399
GCA_003691405.1	GCA_003691405.1_02605	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP033100.1	24410	25255
GCA_003691405.1	GCA_003691405.1_02606	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP033100.1	25362	27119
GCA_003691405.1	GCA_003691405.1_02607	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP033100.1	27109	27489
GCA_003691405.1	GCA_003691405.1_02610	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP033100.1	29294	30760
GCA_001064935.1	GCA_001064935.1_02254	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	86.18	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JVHH01000077.1	1769	3247
GCA_030228805.1	GCA_030228805.1_00024	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPGG010000010.1	21264	22118
GCA_001750825.1	GCA_001750825.1_00258	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP012694.1	237919	239298
GCA_001750825.1	GCA_001750825.1_00996	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP012694.1	986448	987353
GCA_001750825.1	GCA_001750825.1_01176	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.82	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP012694.1	1160067	1161305
GCA_001750825.1	GCA_001750825.1_01177	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.14	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP012694.1	1161709	1162341
GCA_001750825.1	GCA_001750825.1_01179	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.36	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP012694.1	1163163	1164731
GCA_001750825.1	GCA_001750825.1_01374	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.21	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP012694.1	1365035	1366561
GCA_001750825.1	GCA_001750825.1_01483	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_002244796.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	CP012694.1	1479700	1480905
GCA_947253095.1	GCA_947253095.1_00538	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAMXYA010000004.1	79874	80839
GCA_030166435.1	GCA_030166435.1_00057	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	213	221	95.02	68.57	210	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP126342.1	51765	52406
GCA_030166435.1	GCA_030166435.1_02467	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	260	259	99.61	41.76	261	WP_014386410.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	CP126342.1	2608199	2608981
GCA_030166435.1	GCA_030166435.1_02720	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	414	100.00	75.48	416	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP126342.1	2921280	2922521
GCA_030166435.1	GCA_030166435.1_02797	blaPOM	POM family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	286	286	100.00	99.30	286	WP_044403015.1	subclass B3 metallo-beta-lactamase POM-1	NF000438.2	POM family subclass B3 metallo-beta-lactamase	CP126342.1	3000914	3001774
GCA_000738325.1	GCA_000738325.1_00031	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JFCN01000003.1	2809	4590
GCA_000738325.1	GCA_000738325.1_00245	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JFCN01000007.1	1581	2000
GCA_000738325.1	GCA_000738325.1_00246	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	209	278	75.18	99.52	209	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	JFCN01000007.1	2207	2836
GCA_000738325.1	GCA_000738325.1_00248	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.49	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JFCN01000007.1	3040	4215
GCA_000738325.1	GCA_000738325.1_00288	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JFCN01000008.1	909	1724
GCA_000738325.1	GCA_000738325.1_01967	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JFCN01000065.1	13570	14991
GCA_000738325.1	GCA_000738325.1_01972	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCN01000065.1	19451	20305
GCA_003417445.1	GCA_003417445.1_00695	ampC-Kaer	AmpC-Kaer family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	386	381	100.00	98.69	381	WP_063406924.1	extended-spectrum class C beta-lactamase AmpC-Kaer-1	NF041662.1	AmpC-Kaer family extended-spectrum class C beta-lactamase	QVMZ01000002.1	72355	73515
GCA_003417445.1	GCA_003417445.1_01317	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.22	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	QVMZ01000003.1	158631	159746
GCA_003417445.1	GCA_003417445.1_01322	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	724	724	100.00	100.00	724	AEG95593.1	siderophore salmochelin receptor IroN	NA	NA	QVMZ01000003.1	165872	168046
GCA_003417445.1	GCA_003417445.1_01922	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	144	141	99.29	87.14	140	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	QVMZ01000004.1	317950	318384
GCA_003417445.1	GCA_003417445.1_02499	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	97.43	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	QVMZ01000006.1	91165	94317
GCA_003417445.1	GCA_003417445.1_02982	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	96.40	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	QVMZ01000007.1	275127	275546
GCA_003417445.1	GCA_003417445.1_03932	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	355	394	81.73	96.27	322	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	QVMZ01000014.1	19679	20746
GCA_003417445.1	GCA_003417445.1_04224	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	303	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	QVMZ01000017.1	35539	36450
GCA_003417445.1	GCA_003417445.1_04846	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	97.56	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	QVMZ01000024.1	64676	65908
GCA_017655965.1	GCA_017655965.1_00557	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	123	100.00	45.60	125	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040408.1	530780	531154
GCA_019375595.1	GCA_019375595.1_01949	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCG010000043.1	17734	18699
GCA_019375595.1	GCA_019375595.1_02365	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCG010000068.1	2131	2931
GCA_019375595.1	GCA_019375595.1_02482	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCG010000073.1	1866	3791
GCA_004342465.1	GCA_004342465.1_00839	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	309	147	93.88	43.48	138	ABG05788.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	SLXF01000002.1	151186	152115
GCA_004342465.1	GCA_004342465.1_01598	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	97.68	50.17	303	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	SLXF01000003.1	309283	310182
GCA_004342465.1	GCA_004342465.1_03674	aac(3)-I	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	158	156	91.03	66.90	142	WP_034006142.1	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	SLXF01000014.1	59441	59917
GCA_004342465.1	GCA_004342465.1_03795	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	97	91	97.80	65.22	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	SLXF01000019.1	7363	7656
GCA_004331935.1	GCA_004331935.1_00167	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP036529.1	146117	147316
GCA_023509315.1	GCA_023509315.1_02087	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP091865.1	2265196	2266047
GCA_023509315.1	GCA_023509315.1_02091	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP091865.1	2268895	2270070
GCA_023509315.1	GCA_023509315.1_02093	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP091865.1	2271273	2272127
GCA_006094315.1	GCA_006094315.1_00739	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	397	396	98.48	87.95	390	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP034553.1	777003	778196
GCA_006094315.1	GCA_006094315.1_01102	norM	multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	462	462	99.78	92.19	461	AAG27731.1	multidrug efflux MATE transporter NorM	NA	NA	CP034553.1	1161582	1162970
GCA_006094315.1	GCA_006094315.1_04216	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	84.62	52.07	121	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP034554.1	674542	674937
GCA_006094315.1	GCA_006094315.1_04483	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	410	395	99.24	63.01	392	WP_031633255.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP034554.1	975114	976346
GCA_006094315.1	GCA_006094315.1_04816	ant(3)	ANT(3)-I family aminoglycoside nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	HMM	270	262	99.62	63.98	261	WP_071846244.1	ANT(3)-I family aminoglycoside nucleotidyltransferase	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP034554.1	1339207	1340019
GCA_006094315.1	GCA_006094315.1_05660	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	302	99.67	55.15	301	WP_105807557.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP034554.1	2298425	2299324
GCA_006094315.1	GCA_006094315.1_06037	blaPEN-bcc	PEN family class A beta-lactamase, Bcc-type	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	312	312	100.00	100.00	312	WP_027789588.1	PEN family class A beta-lactamase, Bcc-type	NF000320.3	PEN family class A beta-lactamase, Bcc-type	CP034554.1	2695183	2696121
GCA_006094315.1	GCA_006094315.1_06425	blaOXA	OXA-1043 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	100.00	84.76	269	WP_077021671.1	OXA-1043 family class D beta-lactamase	NF040600.1	OXA-1043 family class D beta-lactamase	CP034554.1	3127581	3128390
GCA_006094315.1	GCA_006094315.1_06771	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	389	408	92.16	56.76	377	WP_322881141.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP034555.1	119156	120325
GCA_005502385.1	GCA_005502385.1_01535	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	SCOV01000004.1	81698	82258
GCA_005502385.1	GCA_005502385.1_01536	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	504	514	98.05	100.00	504	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	SCOV01000004.1	82473	83987
GCA_018379295.1	GCA_018379295.1_00370	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	95.47	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAGZVW010000001.1	106048	107772
GCA_018379295.1	GCA_018379295.1_00371	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.63	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAGZVW010000001.1	107774	109510
GCA_018379295.1	GCA_018379295.1_00661	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAGZVW010000018.1	10560	10988
GCA_018379295.1	GCA_018379295.1_00666	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAGZVW010000018.1	12729	14192
GCA_018379295.1	GCA_018379295.1_00667	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAGZVW010000018.1	14312	15529
GCA_963395045.1	GCA_963395045.1_00472	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.30	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPM010000002.1	168368	169747
GCA_963395045.1	GCA_963395045.1_00674	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	94.17	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPM010000003.1	77680	78918
GCA_963395045.1	GCA_963395045.1_01130	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPM010000005.1	99490	101016
GCA_001066195.1	GCA_001066195.1_00493	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JUTT01000041.1	20539	22458
GCA_025399565.1	GCA_025399565.1_01571	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	402	396	95.45	45.91	379	WP_128268282.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	JAODVC010000002.1	415036	416244
GCA_025399565.1	GCA_025399565.1_02680	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.47	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	JAODVC010000004.1	189271	192120
GCA_025399565.1	GCA_025399565.1_03162	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	97	91	97.80	65.22	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JAODVC010000005.1	119800	120093
GCA_025399565.1	GCA_025399565.1_03388	aac(3)-IVb	aminoglycoside N-acetyltransferase AAC(3)-IVb	core	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	BLASTP	265	265	99.62	88.26	264	WP_149317372.1	aminoglycoside N-acetyltransferase AAC(3)-IVb	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	JAODVC010000005.1	370878	371675
GCA_025399565.1	GCA_025399565.1_04370	blaOXA	OXA-837 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	301	100.00	82.30	305	WP_148281568.1	OXA-837 family class D beta-lactamase	NF042983.1	OXA-837 family class D beta-lactamase	JAODVC010000007.1	209156	210073
GCA_000248355.2	GCA_000248355.2_00034	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	PARTIALP	231	295	78.31	93.94	231	ASF80766.1	heat resistance protein YfdX2	NA	NA	AIEL01000193.1	119	814
GCA_000248355.2	GCA_000248355.2_00936	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	AIEL01000040.1	10566	10802
GCA_000248355.2	GCA_000248355.2_00937	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	AIEL01000040.1	10799	11164
GCA_000248355.2	GCA_000248355.2_00938	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	97.50	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AIEL01000040.1	11182	12867
GCA_000248355.2	GCA_000248355.2_00939	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	AIEL01000040.1	12906	13331
GCA_000248355.2	GCA_000248355.2_00940	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	84.62	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	AIEL01000040.1	13359	13634
GCA_000248355.2	GCA_000248355.2_00941	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	94.83	116	CAA70196.1	mercuric transport protein MerT	NA	NA	AIEL01000040.1	13648	13998
GCA_000248355.2	GCA_000248355.2_00942	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.25	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	AIEL01000040.1	14070	14525
GCA_000248355.2	GCA_000248355.2_01432	blaOXA-283	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	276	276	100.00	100.00	276	WP_004647119.1	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	NF000436.2	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	AIEL01000025.1	7661	8491
GCA_000248355.2	GCA_000248355.2_03346	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	97.23	76.68	386	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	AIEL01000001.1	149392	150612
GCA_030217915.1	GCA_030217915.1_00280	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	69.57	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JASOOT010000035.1	20668	21087
GCA_030217915.1	GCA_030217915.1_01108	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JASOOT010000042.1	29181	30254
GCA_030217915.1	GCA_030217915.1_01564	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASOOT010000011.1	10916	11296
GCA_030217915.1	GCA_030217915.1_01565	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASOOT010000011.1	11286	13043
GCA_030217915.1	GCA_030217915.1_01566	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASOOT010000011.1	13150	13995
GCA_030217915.1	GCA_030217915.1_01674	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASOOT010000050.1	5912	7201
GCA_023109355.1	GCA_023109355.1_00760	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDUG010000001.1	360982	362199
GCA_023109355.1	GCA_023109355.1_00761	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDUG010000001.1	362319	363782
GCA_023109355.1	GCA_023109355.1_01532	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JALDUG010000005.1	115638	116375
GCA_902362895.1	GCA_902362895.1_01087	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	296	98.99	42.66	293	WP_005827792.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CABIYG010000002.1	506735	507640
GCA_017298755.1	GCA_017298755.1_01054	smdA	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	591	591	100.00	98.48	591	BAF79679.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	NA	NA	CP071196.1	1099705	1101480
GCA_017298755.1	GCA_017298755.1_01055	smdB	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	592	592	100.00	98.65	592	BAF79680.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	NA	NA	CP071196.1	1101473	1103251
GCA_017298755.1	GCA_017298755.1_01070	sdeY	multidrug efflux RND transporter permease subunit SdeY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1048	1051	99.43	95.70	1046	BAC77251.1	multidrug efflux RND transporter permease subunit SdeY	NA	NA	CP071196.1	1112541	1115687
GCA_017298755.1	GCA_017298755.1_01956	sdeB	multidrug efflux RND transporter permease subunit SdeB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1047	1047	100.00	99.62	1047	AAO18187.2	multidrug efflux RND transporter permease subunit SdeB	NA	NA	CP071196.1	2018162	2021305
GCA_017298755.1	GCA_017298755.1_01957	sdeA	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	395	395	100.00	99.75	395	AAS55383.1	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	CP071196.1	2021330	2022517
GCA_017298755.1	GCA_017298755.1_02296	blaSRT	SRT/SST family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	378	378	100.00	99.47	378	WP_063864750.1	cephalosporin-hydrolyzing class C beta-lactamase SST-1	NF000423.2	SRT/SST family class C beta-lactamase	CP071196.1	2345831	2346967
GCA_017298755.1	GCA_017298755.1_02529	tet(41)	tetracycline efflux MFS transporter Tet(41)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	388	393	98.73	95.62	388	WP_063855881.1	tetracycline efflux MFS transporter Tet(41)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP071196.1	2615278	2616444
GCA_017298755.1	GCA_017298755.1_02613	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	91	102	90.20	71.58	95	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP071196.1	2705513	2705788
GCA_017298755.1	GCA_017298755.1_02627	ssmE	multidrug efflux SMR transporter SsmE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	106	110	96.36	100.00	106	BAF80121.1	multidrug efflux SMR transporter SsmE	NA	NA	CP071196.1	2720916	2721236
GCA_017298755.1	GCA_017298755.1_02729	smfY	multidrug efflux MFS transporter SmfY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	490	490	100.00	98.37	490	BAE79899.1	multidrug efflux MFS transporter SmfY	NA	NA	CP071196.1	2836702	2838174
GCA_017298755.1	GCA_017298755.1_02876	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	139	98.56	67.15	137	WP_004857515.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP071196.1	2978268	2978675
GCA_017298755.1	GCA_017298755.1_04303	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	146	146	100.00	100.00	146	WP_033639326.1	aminoglycoside 6-N-acetyltransferase	NF000021.4	aminoglycoside 6-N-acetyltransferase	CP071196.1	4464245	4464685
GCA_017298755.1	GCA_017298755.1_04799	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	81.27	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP071196.1	4987037	4987939
GCA_916438715.1	GCA_916438715.1_00511	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	353	459	69.93	98.75	321	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NA	NA	CAKAFK010000001.1	434153	435214
GCA_916438715.1	GCA_916438715.1_01269	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	487	492	98.17	86.54	483	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAKAFK010000001.1	1089690	1091153
GCA_008180065.1	GCA_008180065.1_00339	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VSZK01000001.1	391794	392648
GCA_008180065.1	GCA_008180065.1_00817	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VSZK01000001.1	915515	916936
GCA_008180065.1	GCA_008180065.1_01709	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	VSZK01000001.1	1928284	1929099
GCA_008180065.1	GCA_008180065.1_01713	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	VSZK01000001.1	1931137	1931556
GCA_008180065.1	GCA_008180065.1_01714	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	209	278	75.18	99.52	209	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	VSZK01000001.1	1931763	1932392
GCA_008180065.1	GCA_008180065.1_01715	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	VSZK01000001.1	1932596	1933771
GCA_008180065.1	GCA_008180065.1_01740	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.16	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VSZK01000001.1	1959369	1961150
GCA_934233785.1	GCA_934233785.1_00975	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	100.00	43.90	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAKQGP010000003.1	223141	223494
GCA_001064575.1	GCA_001064575.1_01319	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVLL01000193.1	4207	5865
GCA_902483495.1	GCA_902483495.1_00420	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABTDD010000021.1	52110	54029
GCA_902483495.1	GCA_902483495.1_01380	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CABTDD010000029.1	1026	1886
GCA_902483495.1	GCA_902483495.1_01573	senB	enterotoxin production-related protein TieB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	391	391	100.00	100.00	391	AAZ89288.1	enterotoxin production-related protein TieB	NA	NA	CABTDD010000042.1	6687	7862
GCA_001598795.1	GCA_001598795.1_01012	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	275	94.91	60.15	261	WP_125064048.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	BCZP01000003.1	110455	111237
GCA_001598795.1	GCA_001598795.1_02299	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	268	96.64	70.27	259	WP_114268491.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	BCZP01000007.1	188565	189365
GCA_001598795.1	GCA_001598795.1_02329	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	302	99.34	54.93	304	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	BCZP01000007.1	225950	226861
GCA_902385485.1	GCA_902385485.1_00731	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	100.00	92.56	578	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CABMFT010000001.1	764371	766107
GCA_902385485.1	GCA_902385485.1_00732	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.99	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CABMFT010000001.1	766109	767833
GCA_000014205.1	GCA_000014205.1_01449	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP000387.1	1465558	1465986
GCA_003626335.1	GCA_003626335.1_01305	blaBRO-2	class A beta-lactamase BRO-2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003665544.1	class A beta-lactamase BRO-2	NF033103.1	class A beta-lactamase	QZHK01000004.1	121803	122744
GCA_030176515.1	GCA_030176515.1_00233	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUO010000012.1	59860	60714
GCA_016802425.1	GCA_016802425.1_00397	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	99.78	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP048911.1	387926	389305
GCA_016802425.1	GCA_016802425.1_01289	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	301	301	100.00	100.00	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP048911.1	1238930	1239835
GCA_016802425.1	GCA_016802425.1_01408	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	99.51	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP048911.1	1364980	1366218
GCA_016802425.1	GCA_016802425.1_01409	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	210	210	100.00	100.00	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP048911.1	1366468	1367100
GCA_016802425.1	GCA_016802425.1_01411	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	99.43	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP048911.1	1367737	1369305
GCA_016802425.1	GCA_016802425.1_01756	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	507	100.00	99.41	507	AAD54074.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP048911.1	1694386	1695909
GCA_015559775.1	GCA_015559775.1_00879	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JADMQM010000001.1	213044	214969
GCA_002014795.1	GCA_002014795.1_00384	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	MUYO01000001.1	382926	384143
GCA_002014795.1	GCA_002014795.1_00385	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	MUYO01000001.1	384263	385726
GCA_002014795.1	GCA_002014795.1_00402	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	MUYO01000001.1	398918	399346
GCA_002014795.1	GCA_002014795.1_00601	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	MUYO01000001.1	609644	610843
GCA_029929625.1	GCA_029929625.1_01596	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDG010000002.1	317900	319192
GCA_029929625.1	GCA_029929625.1_02521	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAREDG010000009.1	11950	12264
GCA_029929625.1	GCA_029929625.1_02522	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDG010000009.1	12264	13553
GCA_029929625.1	GCA_029929625.1_02523	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREDG010000009.1	13571	13972
GCA_958435325.1	GCA_958435325.1_00045	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.15	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CAUBFW010000001.1	47183	48919
GCA_958435325.1	GCA_958435325.1_00046	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CAUBFW010000001.1	48921	50645
GCA_958435325.1	GCA_958435325.1_01468	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAUBFW010000030.1	1231	2448
GCA_000022305.1	GCA_000022305.1_01178	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	484	631	70.36	42.51	454	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP001392.1	1220984	1222438
GCA_000022305.1	GCA_000022305.1_01557	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	302	97.68	57.48	301	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP001392.1	1611992	1612882
GCA_000022305.1	GCA_000022305.1_02166	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	93.75	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP001392.1	2278571	2279005
GCA_000022305.1	GCA_000022305.1_02167	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	AAB59075.1	mercuric transport protein MerT	NA	NA	CP001392.1	2279077	2279427
GCA_000022305.1	GCA_000022305.1_02168	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	90.11	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP001392.1	2279441	2279716
GCA_000022305.1	GCA_000022305.1_02169	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	153	140	100.00	100.00	140	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP001392.1	2279713	2280174
GCA_000022305.1	GCA_000022305.1_02170	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	564	561	100.00	85.13	565	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP001392.1	2280226	2281920
GCA_000022305.1	GCA_000022305.1_02171	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	120	121	100.00	82.64	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP001392.1	2281938	2282300
GCA_000022305.1	GCA_000022305.1_02172	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	100.00	78.21	78	AAA88371.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP001392.1	2282297	2282533
GCA_000022305.1	GCA_000022305.1_02177	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	122	120	100.00	59.84	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP001392.1	2287046	2287414
GCA_023147335.1	GCA_023147335.1_01678	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHXPF010000004.1	294615	296039
GCA_013009555.1	GCA_013009555.1_01148	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	408	99.26	98.77	405	WP_012102963.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP046176.1	1425450	1426667
GCA_013009555.1	GCA_013009555.1_01150	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	219	212	93.40	65.83	199	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP046176.1	1427518	1428177
GCA_013009555.1	GCA_013009555.1_01153	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	225	244	91.80	96.43	224	WP_014387027.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP046176.1	1429150	1429827
GCA_013009555.1	GCA_013009555.1_02318	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	308	300	98.00	51.85	297	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP046176.1	2700348	2701274
GCA_013009555.1	GCA_013009555.1_04355	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP046176.1	5141073	5142998
GCA_024296005.1	GCA_024296005.1_00616	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JANCPD010000002.1	23487	25406
GCA_024296005.1	GCA_024296005.1_01505	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	89.44	61.42	127	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPD010000006.1	14011	14439
GCA_024296005.1	GCA_024296005.1_01510	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPD010000006.1	17410	18627
GCA_024296005.1	GCA_024296005.1_01511	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPD010000006.1	18747	20210
GCA_024296005.1	GCA_024296005.1_01516	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPD010000006.1	22160	22588
GCA_014076415.1	GCA_014076415.1_02296	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	302	97.02	51.86	295	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP043568.1	2490157	2491062
GCA_014076415.1	GCA_014076415.1_02663	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP043568.1	2909362	2909817
GCA_014076415.1	GCA_014076415.1_02664	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP043568.1	2909889	2910239
GCA_014076415.1	GCA_014076415.1_02665	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	94.51	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP043568.1	2910255	2910530
GCA_014076415.1	GCA_014076415.1_02666	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	135	140	98.57	78.99	138	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP043568.1	2910558	2910965
GCA_014076415.1	GCA_014076415.1_02667	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	560	561	99.47	89.78	558	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP043568.1	2911004	2912686
GCA_014076415.1	GCA_014076415.1_02668	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP043568.1	2912704	2913069
GCA_014076415.1	GCA_014076415.1_02669	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	93.59	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP043568.1	2913066	2913302
GCA_014076415.1	GCA_014076415.1_02982	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	275	86.55	65.13	238	WP_117407753.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP043568.1	3218270	3219070
GCA_014076415.1	GCA_014076415.1_03574	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP043568.1	3835977	3836816
GCA_014076415.1	GCA_014076415.1_03575	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP043568.1	3836810	3837157
GCA_014076415.1	GCA_014076415.1_03576	cmlA6	chloramphenicol efflux MFS transporter CmlA6	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	ALLELEP	419	419	100.00	100.00	419	WP_001256773.1	chloramphenicol efflux MFS transporter CmlA6	NF000509.1	CmlA family chloramphenicol efflux MFS transporter	CP043568.1	3837349	3838608
GCA_014076415.1	GCA_014076415.1_03577	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	269	263	100.00	100.00	263	WP_001261740.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP043568.1	3838870	3839679
GCA_014076415.1	GCA_014076415.1_03578	blaCARB-2	PSE family carbenicillin-hydrolyzing class A beta-lactamase CARB-2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	288	288	100.00	100.00	288	WP_001931474.1	PSE family carbenicillin-hydrolyzing class A beta-lactamase CARB-2	NF000480.2	PSE family carbenicillin-hydrolyzing class A beta-lactamase	CP043568.1	3839779	3840645
GCA_014076415.1	GCA_014076415.1_03579	dfrA16	trimethoprim-resistant dihydrofolate reductase DfrA16	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	PARTIALP	83	157	52.87	100.00	83	WP_032490158.1	trimethoprim-resistant dihydrofolate reductase DfrA16	NA	NA	CP043568.1	3840810	3841061
GCA_014076415.1	GCA_014076415.1_03584	tet(C)	tetracycline efflux MFS transporter Tet(C)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	396	396	100.00	100.00	396	WP_000841446.1	tetracycline efflux MFS transporter Tet(C)	NF012191.0	tetracycline efflux MFS transporter Tet(C)	CP043568.1	3844578	3845768
GCA_014076415.1	GCA_014076415.1_05519	mph(E)	Mph(E) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EXACTP	294	294	100.00	100.00	294	WP_000155092.1	Mph(E) family macrolide 2-phosphotransferase	NF012158.1	Mph(E) family macrolide 2-phosphotransferase	CP043569.1	648	1532
GCA_014076415.1	GCA_014076415.1_05520	msr(E)	ABC-F type ribosomal protection protein Msr(E)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN	EXACTP	491	491	100.00	100.00	491	WP_000052512.1	ABC-F type ribosomal protection protein Msr(E)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP043569.1	1588	3063
GCA_000759205.1	GCA_000759205.1_00020	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JRNO01000001.1	22936	24132
GCA_004332555.2	GCA_004332555.2_00401	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	99.78	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP032429.2	388887	390266
GCA_004332555.2	GCA_004332555.2_01302	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	301	301	100.00	100.00	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP032429.2	1246653	1247558
GCA_004332555.2	GCA_004332555.2_01422	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	99.51	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP032429.2	1372743	1373981
GCA_004332555.2	GCA_004332555.2_01423	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	210	210	100.00	100.00	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP032429.2	1374231	1374863
GCA_004332555.2	GCA_004332555.2_01425	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	99.23	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP032429.2	1375500	1377068
GCA_004332555.2	GCA_004332555.2_01781	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	507	100.00	99.80	507	AAD54074.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP032429.2	1705048	1706571
GCA_022346515.1	GCA_022346515.1_00506	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKREQ010000001.1	172097	173389
GCA_022070485.1	GCA_022070485.1_00935	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035234.1	894219	895418
GCA_023148415.1	GCA_023148415.1_01739	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHXNV010000002.1	287414	288706
GCA_013315195.1	GCA_013315195.1_00496	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JABUHC010000001.1	569905	571383
GCA_006228325.1	GCA_006228325.1_00948	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP040231.1	896438	897655
GCA_006228325.1	GCA_006228325.1_00949	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP040231.1	897775	899238
GCA_000482365.1	GCA_000482365.1_00012	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	KI535306.1	13104	14069
GCA_000482365.1	GCA_000482365.1_01785	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	AXVC01000034.1	10254	12179
GCA_001697885.1	GCA_001697885.1_00171	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016673.1	176974	178212
GCA_001697885.1	GCA_001697885.1_00172	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016673.1	178620	179252
GCA_001697885.1	GCA_001697885.1_00174	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016673.1	180077	181645
GCA_001697885.1	GCA_001697885.1_00374	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016673.1	392146	393672
GCA_001697885.1	GCA_001697885.1_01431	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016673.1	1471683	1473062
GCA_937919105.1	GCA_937919105.1_01310	aph(3)-IIa	aminoglycoside O-phosphotransferase APH(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_000572405.1	aminoglycoside O-phosphotransferase APH(3)-IIa	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CALFON010000165.1	197	991
GCA_937919105.1	GCA_937919105.1_01728	catA1	type A-1 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	219	219	100.00	100.00	219	WP_000412211.1	type A-1 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CALFON010000214.1	4184	4843
GCA_022689665.1	GCA_022689665.1_01195	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JALCWW010000027.1	537	860
GCA_022689665.1	GCA_022689665.1_01675	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWW010000003.1	50255	51544
GCA_022689665.1	GCA_022689665.1_01678	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWW010000003.1	53712	54059
GCA_030227185.1	GCA_030227185.1_01632	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPIU010000004.1	131496	132350
GCA_025143445.1	GCA_025143445.1_01150	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645013.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JALXPI010000011.1	6206	6691
GCA_025143445.1	GCA_025143445.1_01153	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JALXPI010000011.1	8412	11486
GCA_025143445.1	GCA_025143445.1_01161	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALXPI010000011.1	19833	20393
GCA_025143445.1	GCA_025143445.1_01162	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALXPI010000011.1	20578	22122
GCA_025143445.1	GCA_025143445.1_01174	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALXPI010000012.1	9898	10743
GCA_025143445.1	GCA_025143445.1_01175	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALXPI010000012.1	10850	12607
GCA_025143445.1	GCA_025143445.1_01176	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALXPI010000012.1	12597	12977
GCA_025143445.1	GCA_025143445.1_01179	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALXPI010000012.1	14778	16244
GCA_025143445.1	GCA_025143445.1_01212	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALXPI010000002.1	13725	15014
GCA_025143445.1	GCA_025143445.1_01215	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALXPI010000002.1	17182	17529
GCA_014435245.1	GCA_014435245.1_00226	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	JAAPAW010000010.1	68247	68741
GCA_014435245.1	GCA_014435245.1_00228	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAAPAW010000010.1	69947	71866
GCA_014435245.1	GCA_014435245.1_00234	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAAPAW010000010.1	78243	79682
GCA_014435245.1	GCA_014435245.1_00239	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAAPAW010000010.1	82099	82836
GCA_014435245.1	GCA_014435245.1_00473	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	474	574	82.58	91.35	474	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NA	NA	JAAPAW010000011.1	217424	218848
GCA_014435245.1	GCA_014435245.1_00474	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	92.03	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAAPAW010000011.1	218850	220586
GCA_916720955.1	GCA_916720955.1_00940	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAKASA010000005.1	141501	143159
GCA_916720955.1	GCA_916720955.1_01802	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CAKASA010000027.1	1611	2465
GCA_003492145.1	GCA_003492145.1_01220	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	QQMV01000005.1	74226	75131
GCA_003492145.1	GCA_003492145.1_01782	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	283	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	QQMV01000009.1	20045	20896
GCA_003492145.1	GCA_003492145.1_01783	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.87	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	QQMV01000009.1	20926	22164
GCA_003492145.1	GCA_003492145.1_01996	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	QQMV01000011.1	48555	50081
GCA_025558685.1	GCA_025558685.1_00071	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.68	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094729.1	79673	80962
GCA_025558685.1	GCA_025558685.1_00074	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP094729.1	83140	83487
GCA_025558685.1	GCA_025558685.1_00151	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	94.37	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP094729.1	177344	177772
GCA_025558685.1	GCA_025558685.1_00167	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP094729.1	203560	204057
GCA_025558685.1	GCA_025558685.1_00867	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP094729.1	925367	926212
GCA_025558685.1	GCA_025558685.1_00868	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP094729.1	926319	928076
GCA_025558685.1	GCA_025558685.1_00869	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP094729.1	928066	928446
GCA_025558685.1	GCA_025558685.1_02197	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094729.1	2255869	2257161
GCA_025558685.1	GCA_025558685.1_02431	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP094730.1	636	2015
GCA_022347325.1	GCA_022347325.1_01081	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRDU010000026.1	890	2314
GCA_015645205.1	GCA_015645205.1_01918	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JADOYF010000005.1	19729	20802
GCA_015645205.1	GCA_015645205.1_02055	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JADOYF010000006.1	55220	56509
GCA_015645205.1	GCA_015645205.1_02227	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JADOYF010000008.1	30472	31761
GCA_015645205.1	GCA_015645205.1_02228	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JADOYF010000008.1	31779	32180
GCA_015645205.1	GCA_015645205.1_02275	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JADOYF010000008.1	72428	74434
GCA_015645205.1	GCA_015645205.1_02484	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JADOYF010000012.1	7623	8468
GCA_015645205.1	GCA_015645205.1_02485	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JADOYF010000012.1	8575	10332
GCA_015645205.1	GCA_015645205.1_02486	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JADOYF010000012.1	10322	10702
GCA_015645205.1	GCA_015645205.1_02562	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JADOYF010000019.1	511	1950
GCA_015260635.1	GCA_015260635.1_00505	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZWF010000016.1	15150	16340
GCA_015260635.1	GCA_015260635.1_01984	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	241	321	75.08	100.00	241	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF012099.1	class A beta-lactamase, subclass A2	JABZWF010000069.1	4	729
GCA_024104395.1	GCA_024104395.1_01128	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAHAVE010000001.1	723494	723913
GCA_024104395.1	GCA_024104395.1_01313	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAHAVE010000023.1	2727	4733
GCA_024104395.1	GCA_024104395.1_01887	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHAVE010000003.1	175126	176418
GCA_024104395.1	GCA_024104395.1_02059	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAHAVE010000004.1	160864	161937
GCA_002073555.2	GCA_002073555.2_00051	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP020422.2	49095	50474
GCA_002073555.2	GCA_002073555.2_00558	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.21	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP020422.2	573620	575146
GCA_002073555.2	GCA_002073555.2_01430	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP020422.2	1431654	1433222
GCA_002073555.2	GCA_002073555.2_01434	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP020422.2	1434891	1435523
GCA_002073555.2	GCA_002073555.2_01435	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.54	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP020422.2	1435931	1437169
GCA_002073555.2	GCA_002073555.2_01555	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP020422.2	1572351	1573256
GCA_003425815.1	GCA_003425815.1_01568	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.41	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031691.1	1563008	1564402
GCA_024330295.1	GCA_024330295.1_01961	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	PARTIALP	172	244	65.16	99.37	159	WP_063844787.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NA	NA	JANDXA010000041.1	12918	13436
GCA_024330295.1	GCA_024330295.1_02475	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANDXA010000055.1	1290	2255
GCA_019928915.1	GCA_019928915.1_00932	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZOR010000002.1	86973	87401
GCA_000257275.1	GCA_000257275.1_00330	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	EXACTP	165	165	100.00	100.00	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	CP002291.1	306960	307457
GCA_000257275.1	GCA_000257275.1_00331	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	571	571	100.00	99.82	571	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	CP002291.1	307454	309169
GCA_000257275.1	GCA_000257275.1_00332	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	98.63	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	CP002291.1	309173	309613
GCA_000257275.1	GCA_000257275.1_00334	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	97.54	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CP002291.1	310828	311439
GCA_000257275.1	GCA_000257275.1_00335	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	98.98	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP002291.1	311529	312416
GCA_000257275.1	GCA_000257275.1_00336	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.67	304	APX31172.1	heat resistance protein YfdX1	NA	NA	CP002291.1	312519	313433
GCA_000257275.1	GCA_000257275.1_00337	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	EXACTP	152	152	100.00	100.00	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	CP002291.1	313456	313914
GCA_000257275.1	GCA_000257275.1_00340	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	EXACTP	949	949	100.00	100.00	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP002291.1	315981	318830
GCA_000257275.1	GCA_000257275.1_00341	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	98.94	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	CP002291.1	318936	319505
GCA_000257275.1	GCA_000257275.1_01315	emrE	multidrug efflux SMR transporter EmrE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	110	110	100.00	98.18	110	CAA77936.1	multidrug efflux SMR transporter EmrE	NF042984.1	multidrug efflux SMR transporter EmrE	CP002291.1	1229151	1229483
GCA_000257275.1	GCA_000257275.1_01726	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	PARTIALP	90	102	88.24	100.00	90	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP002291.1	1606342	1606614
GCA_000257275.1	GCA_000257275.1_03555	sslE	lipoprotein metalloprotease SslE	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	1520	1520	100.00	88.03	1521	ADE89421.1	lipoprotein metalloprotease SslE	NF037973.1	lipoprotein metalloprotease SslE	CP002291.1	3355383	3359945
GCA_000257275.1	GCA_000257275.1_04142	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	92.36	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	CP002291.1	3904129	3904563
GCA_000257275.1	GCA_000257275.1_04143	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.57	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP002291.1	3904781	3906181
GCA_000257275.1	GCA_000257275.1_04145	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	PARTIALP	182	226	64.60	99.32	146	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP002291.1	3906312	3906860
GCA_000257275.1	GCA_000257275.1_04146	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP002291.1	3906915	3907844
GCA_000257275.1	GCA_000257275.1_04147	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP002291.1	3907849	3908229
GCA_000257275.1	GCA_000257275.1_04148	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP002291.1	3908269	3909165
GCA_000257275.1	GCA_000257275.1_04149	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.83	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP002291.1	3909165	3910982
GCA_000257275.1	GCA_000257275.1_04157	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	751	824	91.26	96.94	752	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP002291.1	3915596	3917851
GCA_000257275.1	GCA_000257275.1_04159	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	99.43	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP002291.1	3918505	3921651
GCA_000257275.1	GCA_000257275.1_04160	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	98.37	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP002291.1	3921662	3922954
GCA_000257275.1	GCA_000257275.1_04161	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP002291.1	3923068	3923421
GCA_000257275.1	GCA_000257275.1_04162	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	97.61	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP002291.1	3923450	3924835
GCA_000257275.1	GCA_000257275.1_04163	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	98.23	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP002291.1	3925025	3925705
GCA_000257275.1	GCA_000257275.1_04164	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	493	491	100.00	97.56	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP002291.1	3925698	3927179
GCA_000257275.1	GCA_000257275.1_04165	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	99.30	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP002291.1	3927424	3927855
GCA_000257275.1	GCA_000257275.1_04185	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	117	117	100.00	99.15	117	BAE77793.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP002291.1	3950965	3951318
GCA_000257275.1	GCA_000257275.1_04187	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	94.33	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP002291.1	3952674	3953099
GCA_000257275.1	GCA_000257275.1_04391	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	394	394	100.00	100.00	394	BAE77620.1	multidrug efflux MFS transporter EmrD	NA	NA	CP002291.1	4165942	4167126
GCA_000257275.1	GCA_000257275.1_04653	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	CP002291.1	4411731	4412633
GCA_000257275.1	GCA_000257275.1_04930	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	377	377	100.00	99.73	377	ABS58643.1	BlaEC family class C beta-lactamase	NF000185.2	BlaEC family class C beta-lactamase	CP002291.1	4691722	4692855
GCA_000257275.1	GCA_000257275.1_05126	mdtM	multidrug efflux MFS transporter MdtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	100.00	97.80	410	AAC77293.1	multidrug efflux MFS transporter MdtM	NA	NA	CP002291.1	4866311	4867543
GCA_009379655.1	GCA_009379655.1_00981	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCKT01000003.1	111916	112857
GCA_000542395.1	GCA_000542395.1_01169	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	KI978386.1	5031	5450
GCA_000542395.1	GCA_000542395.1_01619	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	KI978395.1	127583	128875
GCA_000542395.1	GCA_000542395.1_01729	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	KI978397.1	1609	3615
GCA_000542395.1	GCA_000542395.1_02402	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	KI978418.1	90344	91417
GCA_000542395.1	GCA_000542395.1_02460	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	KI978419.1	43840	44685
GCA_000542395.1	GCA_000542395.1_02461	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	KI978419.1	44792	46549
GCA_000542395.1	GCA_000542395.1_02462	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	KI978419.1	46539	46919
GCA_003942415.1	GCA_003942415.1_02345	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJMX01000063.1	2596	4059
GCA_003942415.1	GCA_003942415.1_02346	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJMX01000063.1	4179	5396
GCA_005503465.1	GCA_005503465.1_00151	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	140	137	88.32	50.40	125	WP_012695486.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	SCOB01000011.1	35641	36063
GCA_005503465.1	GCA_005503465.1_02233	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	458	631	73.22	45.67	462	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	SCOB01000005.1	131	1507
GCA_902373695.1	GCA_902373695.1_01304	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	322	300	96.00	51.39	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CABKND010000005.1	71874	72842
GCA_023373505.1	GCA_023373505.1_00006	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	72.90	47.77	471	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP097204.1	4737	6179
GCA_015560245.1	GCA_015560245.1_00280	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADMRL010000001.1	279128	280591
GCA_015560245.1	GCA_015560245.1_00281	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADMRL010000001.1	280711	281928
GCA_015560245.1	GCA_015560245.1_02091	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	PARTIALP	390	492	79.27	91.03	390	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NA	NA	JADMRL010000009.1	14	1186
GCA_019929725.1	GCA_019929725.1_00240	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZQC010000001.1	251832	252260
GCA_938046545.1	GCA_938046545.1_00559	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	94	91	97.80	67.42	89	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CALIXI010000009.1	98790	99074
GCA_000174655.1	GCA_000174655.1_02104	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.30	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	ACKO02000004.1	157657	159036
GCA_011137195.1	GCA_011137195.1_00019	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	77.86	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	POVK01000001.1	17647	18939
GCA_024204745.1	GCA_024204745.1_00055	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP093173.1	59900	61906
GCA_024204745.1	GCA_024204745.1_00056	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP093173.1	62006	62992
GCA_024204745.1	GCA_024204745.1_00098	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP093173.1	103925	105214
GCA_024204745.1	GCA_024204745.1_00204	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP093173.1	215695	215931
GCA_024204745.1	GCA_024204745.1_00257	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP093173.1	275313	276380
GCA_024204745.1	GCA_024204745.1_00911	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093173.1	945878	946723
GCA_024204745.1	GCA_024204745.1_00912	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093173.1	946830	948587
GCA_024204745.1	GCA_024204745.1_00913	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093173.1	948577	948957
GCA_024204745.1	GCA_024204745.1_02542	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	CP093177.1	1764	2087
GCA_024204745.1	GCA_024204745.1_02544	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP093178.1	125	859
GCA_900478295.1	GCA_900478295.1_01415	copP	copper-binding metallochaperone CopP	plus	STRESS	METAL	COPPER	COPPER	BLASTP	66	66	100.00	96.97	66	AAD05936.1	copper-binding metallochaperone CopP	NF033781.1	copper-binding metallochaperone CopP	LS483488.1	1428811	1429011
GCA_009496295.1	GCA_009496295.1_01110	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WIJL01000003.1	152846	154309
GCA_009496295.1	GCA_009496295.1_01111	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WIJL01000003.1	154429	155646
GCA_009496295.1	GCA_009496295.1_01808	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	320	399	80.20	98.75	320	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJL01000007.1	143489	144451
GCA_001405855.1	GCA_001405855.1_01087	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	296	98.99	42.66	293	WP_005827792.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CZBZ01000002.1	506735	507640
GCA_002879585.1	GCA_002879585.1_01007	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	PNRI01000002.1	556331	557068
GCA_002879585.1	GCA_002879585.1_01396	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	PNRI01000004.1	123388	125307
GCA_024295985.1	GCA_024295985.1_00518	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JANCPO010000011.1	22427	23164
GCA_024295985.1	GCA_024295985.1_00529	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JANCPO010000011.1	33079	34998
GCA_024295985.1	GCA_024295985.1_01416	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPO010000005.1	107771	109234
GCA_024295985.1	GCA_024295985.1_01417	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPO010000005.1	109354	110571
GCA_030418255.1	GCA_030418255.1_00278	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	260	259	99.61	41.76	261	WP_014386410.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	JARGCP010000001.1	298185	298967
GCA_030418255.1	GCA_030418255.1_00513	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	414	100.00	75.48	416	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	JARGCP010000001.1	585022	586263
GCA_030418255.1	GCA_030418255.1_00589	blaPOM-1	subclass B3 metallo-beta-lactamase POM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	286	286	100.00	100.00	286	WP_044403015.1	subclass B3 metallo-beta-lactamase POM-1	NF000438.2	POM family subclass B3 metallo-beta-lactamase	JARGCP010000001.1	661570	662430
GCA_030418255.1	GCA_030418255.1_02795	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	213	221	95.02	68.57	210	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	JARGCP010000002.1	623863	624504
GCA_019375865.1	GCA_019375865.1_00068	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCQ010000010.1	71809	73734
GCA_019375865.1	GCA_019375865.1_01189	cfxA4	extended-spectrum class A beta-lactamase CfxA4	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_057280848.1	extended-spectrum class A beta-lactamase CfxA4	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCQ010000029.1	4992	5957
GCA_019375865.1	GCA_019375865.1_01402	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXCQ010000002.1	278245	279441
GCA_019375865.1	GCA_019375865.1_01765	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAHXCQ010000004.1	2602	3402
GCA_005888195.1	GCA_005888195.1_01250	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	394	464	84.91	98.98	394	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LNKR01000045.1	22	1206
GCA_022341385.1	GCA_022341385.1_01399	blaBRO-2	class A beta-lactamase BRO-2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003665544.1	class A beta-lactamase BRO-2	NF033103.1	class A beta-lactamase	JAEOBL010000005.1	54644	55585
GCA_001807075.1	GCA_001807075.1_00334	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV787356.1	146434	147288
GCA_001807075.1	GCA_001807075.1_02075	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV787401.1	3529	5310
GCA_000162955.1	GCA_000162955.1_01667	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	83.74	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	GG700632.1	396498	397976
GCA_025146235.1	GCA_025146235.1_00558	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JALXMR010000011.1	99185	100039
GCA_001064485.1	GCA_001064485.1_00720	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVLW01000024.1	21478	23118
GCA_009730135.1	GCA_009730135.1_01014	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP046306.1	991671	992960
GCA_009730135.1	GCA_009730135.1_01017	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP046306.1	995128	995475
GCA_009730135.1	GCA_009730135.1_01218	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP046306.1	1206393	1207238
GCA_009730135.1	GCA_009730135.1_01219	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.21	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP046306.1	1207345	1209102
GCA_009730135.1	GCA_009730135.1_01220	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP046306.1	1209092	1209472
GCA_009730135.1	GCA_009730135.1_02447	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP046305.1	21690	22232
GCA_009730135.1	GCA_009730135.1_02448	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP046305.1	22325	23119
GCA_000452385.2	GCA_000452385.2_01202	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	94.58	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP012409.1	1193345	1193956
GCA_000452385.2	GCA_000452385.2_01263	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP012409.1	1243713	1245068
GCA_000452385.2	GCA_000452385.2_01464	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP012409.1	1467309	1468667
GCA_000452385.2	GCA_000452385.2_01592	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP012409.1	1602592	1603644
GCA_000452385.2	GCA_000452385.2_01629	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	509	509	100.00	100.00	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP012409.1	1650288	1651817
GCA_000452385.2	GCA_000452385.2_01861	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP012409.1	1890624	1891601
GCA_000452385.2	GCA_000452385.2_01862	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP012409.1	1891603	1892550
GCA_000452385.2	GCA_000452385.2_01863	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP012409.1	1893118	1894083
GCA_000452385.2	GCA_000452385.2_02122	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.92	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP012409.1	2132213	2133655
GCA_000452385.2	GCA_000452385.2_02361	sep	staphylococcal enterotoxin type P	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	262	260	99.23	99.61	258	ADC38120.1	staphylococcal enterotoxin type P	NA	NA	CP012409.1	2350334	2351122
GCA_000452385.2	GCA_000452385.2_02365	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP012409.1	2352921	2353412
GCA_000452385.2	GCA_000452385.2_02370	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP012409.1	2355624	2355974
GCA_000452385.2	GCA_000452385.2_02525	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.36	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP012409.1	2483096	2484031
GCA_000452385.2	GCA_000452385.2_02531	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP012409.1	2489041	2489748
GCA_000452385.2	GCA_000452385.2_02532	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	97.50	240	ABD31003.1	serine protease SplB	NA	NA	CP012409.1	2489873	2490595
GCA_000452385.2	GCA_000452385.2_02536	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.48	238	ABD30999.1	serine protease SplE	NA	NA	CP012409.1	2493265	2493981
GCA_000452385.2	GCA_000452385.2_02580	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP012409.1	2528643	2529935
GCA_000452385.2	GCA_000452385.2_02752	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP012409.1	2720135	2720887
GCA_905373395.1	GCA_905373395.1_00061	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAJPSO010000001.1	79603	80799
GCA_030227545.1	GCA_030227545.1_00382	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASOZS010000042.1	5819	7714
GCA_030227545.1	GCA_030227545.1_00469	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	125	120	100.00	47.20	125	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASOZS010000054.1	5347	5724
GCA_030227545.1	GCA_030227545.1_00609	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	457	458	98.47	98.45	451	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	JASOZS010000076.1	558	1931
GCA_022538035.1	GCA_022538035.1_01032	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	286	325	97.54	39.94	318	WP_030892446.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	JAKRKB010000002.1	251679	252539
GCA_023614525.1	GCA_023614525.1_01428	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP097885.1	1462141	1464060
GCA_023614525.1	GCA_023614525.1_01753	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP097885.1	1796111	1796842
GCA_023614525.1	GCA_023614525.1_01836	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP097885.1	1867588	1868496
GCA_023614525.1	GCA_023614525.1_01837	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP097885.1	1868493	1869035
GCA_023614525.1	GCA_023614525.1_01838	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP097885.1	1869128	1869922
GCA_003989555.1	GCA_003989555.1_00779	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RBLQ01000020.1	673	1527
GCA_000209935.1	GCA_000209935.1_01066	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	598	593	98.99	33.67	603	WP_012705551.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	FP929042.1	1086188	1087984
GCA_021497885.1	GCA_021497885.1_00917	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP046523.1	853961	854698
GCA_021497885.1	GCA_021497885.1_00928	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP046523.1	864494	866413
GCA_901873385.1	GCA_901873385.1_00249	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CABFLG010000004.1	29294	30673
GCA_028657925.1	GCA_028657925.1_00292	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	97.56	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	CP117797.1	290738	291232
GCA_003044845.1	GCA_003044845.1_01245	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	POXC01000004.1	148961	150601
GCA_001588985.1	GCA_001588985.1_02266	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	LAYG01000008.1	301122	303041
GCA_026782865.1	GCA_026782865.1_00839	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAKUXK010000003.1	117788	119005
GCA_026782865.1	GCA_026782865.1_00840	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAKUXK010000003.1	119125	120588
GCA_026782865.1	GCA_026782865.1_01227	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	395	399	99.00	98.48	395	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JAKUXK010000004.1	190572	191759
GCA_001611955.1	GCA_001611955.1_02375	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.55	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP013911.1	2397465	2398757
GCA_001611955.1	GCA_001611955.1_02455	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP013911.1	2473432	2474724
GCA_001611955.1	GCA_001611955.1_02456	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	110	131	83.97	97.27	110	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP013911.1	2474742	2475074
GCA_001611955.1	GCA_001611955.1_02467	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP013911.1	2482788	2483135
GCA_001611955.1	GCA_001611955.1_02471	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP013911.1	2486818	2488110
GCA_001611955.1	GCA_001611955.1_02477	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP013911.1	2493310	2494599
GCA_001611955.1	GCA_001611955.1_02478	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP013911.1	2494617	2495018
GCA_001611955.1	GCA_001611955.1_02499	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP013911.1	2510805	2511791
GCA_001611955.1	GCA_001611955.1_02500	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP013911.1	2511891	2513897
GCA_001611955.1	GCA_001611955.1_02533	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP013912.1	2762	3607
GCA_001611955.1	GCA_001611955.1_02534	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP013912.1	3714	5471
GCA_001611955.1	GCA_001611955.1_02535	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP013912.1	5461	5841
GCA_016026535.1	GCA_016026535.1_03260	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	275	94.91	59.77	261	WP_125064048.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP065627.1	3584428	3585210
GCA_016026535.1	GCA_016026535.1_05197	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	268	96.64	70.27	259	WP_114268491.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP065627.1	5733825	5734625
GCA_016026535.1	GCA_016026535.1_05227	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	302	99.34	54.93	304	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP065627.1	5771225	5772136
GCA_002005795.1	GCA_002005795.1_00187	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	MUYF01000003.1	159573	159947
GCA_019731115.1	GCA_019731115.1_00441	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAASJV010000001.1	474041	475960
GCA_019731115.1	GCA_019731115.1_00442	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAASJV010000001.1	476885	477622
GCA_000763705.1	GCA_000763705.1_01461	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JQHB01000013.1	70709	72001
GCA_000763705.1	GCA_000763705.1_01626	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JQHB01000015.1	45235	47241
GCA_000763705.1	GCA_000763705.1_01637	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JQHB01000015.1	56067	56414
GCA_000763705.1	GCA_000763705.1_01641	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JQHB01000015.1	60100	61389
GCA_000763705.1	GCA_000763705.1_02023	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JQHB01000022.1	42113	42958
GCA_000763705.1	GCA_000763705.1_02024	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	89.06	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JQHB01000022.1	43065	44822
GCA_000763705.1	GCA_000763705.1_02025	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.83	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JQHB01000022.1	44812	45192
GCA_000763705.1	GCA_000763705.1_02106	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JQHB01000024.1	2800	3192
GCA_000763705.1	GCA_000763705.1_02107	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.87	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JQHB01000024.1	3210	4502
GCA_000763705.1	GCA_000763705.1_02124	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	PARTIALP	156	205	76.10	96.15	156	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JQHB01000027.1	37	507
GCA_030515815.1	GCA_030515815.1_01952	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.42	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100370.1	2099392	2100246
GCA_001809415.1	GCA_001809415.1_01941	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV797643.1	13733	15373
GCA_027683585.1	GCA_027683585.1_01040	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQCXO010000012.1	13748	14485
GCA_027683585.1	GCA_027683585.1_01169	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	91.46	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	JAQCXO010000013.1	48347	48841
GCA_027683585.1	GCA_027683585.1_01754	tet	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	645	639	99.84	79.94	638	WP_122634437.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAQCXO010000021.1	3346	5283
GCA_004772215.1	GCA_004772215.1_00086	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100296.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP038612.1	100954	102312
GCA_004772215.1	GCA_004772215.1_00359	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.45	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP038612.1	380274	381629
GCA_004772215.1	GCA_004772215.1_00398	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	95.07	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP038612.1	415218	415829
GCA_004772215.1	GCA_004772215.1_00432	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	95.30	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	CP038612.1	443843	444547
GCA_004772215.1	GCA_004772215.1_00435	sec1	staphylococcal enterotoxin type C1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	266	266	100.00	98.12	266	CAA29260.1	staphylococcal enterotoxin type C1	NA	NA	CP038612.1	446761	447561
GCA_004772215.1	GCA_004772215.1_00436	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.17	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	CP038612.1	447728	448450
GCA_004772215.1	GCA_004772215.1_01807	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.65	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP038612.1	1859856	1861148
GCA_004772215.1	GCA_004772215.1_01849	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	96.67	240	ABD31003.1	serine protease SplB	NA	NA	CP038612.1	1894642	1895364
GCA_004772215.1	GCA_004772215.1_01866	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	178	311	57.23	99.44	178	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP038612.1	1910889	1911425
GCA_004772215.1	GCA_004772215.1_02295	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.92	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP038612.1	2280480	2281922
GCA_004772215.1	GCA_004772215.1_02464	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	97.12	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP038612.1	2428363	2428782
GCA_004772215.1	GCA_004772215.1_02553	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP038612.1	2520425	2521390
GCA_004772215.1	GCA_004772215.1_02554	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP038612.1	2521958	2522905
GCA_004772215.1	GCA_004772215.1_02555	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP038612.1	2522907	2523884
GCA_004772215.1	GCA_004772215.1_02768	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP038612.1	2754336	2755865
GCA_004772215.1	GCA_004772215.1_02808	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP038612.1	2805080	2806132
GCA_000026965.1	GCA_000026965.1_00332	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.02	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	FM999788.1	339370	340896
GCA_000026965.1	GCA_000026965.1_00584	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	FM999788.1	630942	632510
GCA_000026965.1	GCA_000026965.1_00586	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	FM999788.1	633335	633967
GCA_000026965.1	GCA_000026965.1_00587	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.57	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	FM999788.1	634371	635609
GCA_000026965.1	GCA_000026965.1_00715	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	FM999788.1	774026	774931
GCA_000026965.1	GCA_000026965.1_01455	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	FM999788.1	1537413	1538792
GCA_022291075.1	GCA_022291075.1_00595	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAANHI010000001.1	631003	632295
GCA_022291075.1	GCA_022291075.1_01069	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAANHI010000001.1	1068254	1068739
GCA_022291075.1	GCA_022291075.1_02489	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAANHI010000009.1	4783	5577
GCA_022291075.1	GCA_022291075.1_02490	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAANHI010000009.1	5670	6212
GCA_022291075.1	GCA_022291075.1_02491	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAANHI010000009.1	6209	7117
GCA_022291075.1	GCA_022291075.1_02492	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAANHI010000009.1	7422	8159
GCA_022291075.1	GCA_022291075.1_02501	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAANHI010000011.1	1454	1834
GCA_022291075.1	GCA_022291075.1_02502	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAANHI010000011.1	1824	3581
GCA_022291075.1	GCA_022291075.1_02503	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAANHI010000011.1	3688	4533
GCA_022291075.1	GCA_022291075.1_02515	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	459	459	100.00	99.78	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAANHI010000013.1	1953	3332
GCA_022291075.1	GCA_022291075.1_02522	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAANHI010000005.1	80	1519
GCA_022291075.1	GCA_022291075.1_02524	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAANHI010000006.1	405	890
GCA_022690225.1	GCA_022690225.1_00059	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	56.90	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCVW010000011.1	22230	23282
GCA_022690225.1	GCA_022690225.1_00117	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	ALLELEP	161	161	100.00	100.00	161	WP_011428879.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JALCVW010000017.1	156	641
GCA_022690225.1	GCA_022690225.1_00122	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JALCVW010000019.1	78	401
GCA_022690225.1	GCA_022690225.1_00199	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JALCVW010000001.1	86808	87590
GCA_022690225.1	GCA_022690225.1_00200	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JALCVW010000001.1	87716	88447
GCA_022690225.1	GCA_022690225.1_01545	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVW010000003.1	165851	166198
GCA_022690225.1	GCA_022690225.1_01548	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVW010000003.1	168366	169655
GCA_000338635.1	GCA_000338635.1_02572	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	92.31	66.67	204	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	KB445544.1	2748348	2748995
GCA_004328515.1	GCA_004328515.1_00077	cblA	CblA family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	296	296	100.00	96.28	296	WP_005827792.1	CblA family class A beta-lactamase	NF033098.1	CblA family class A beta-lactamase	CP036491.1	76005	76895
GCA_004328515.1	GCA_004328515.1_00290	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP036491.1	330143	330958
GCA_004328515.1	GCA_004328515.1_00602	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	170	170	100.00	100.00	170	WP_004308783.1	lincosamide nucleotidyltransferase Lnu(AN2)	NF000153.1	lincosamide nucleotidyltransferase Lnu(AN2)	CP036491.1	640455	640967
GCA_004328515.1	GCA_004328515.1_00603	mef(En2)	macrolide efflux MFS transporter Mef(En2)	core	AMR	AMR	MACROLIDE	MACROLIDE	BLASTP	401	401	100.00	99.50	401	WP_063853729.1	macrolide efflux MFS transporter Mef(En2)	NF000154.1	macrolide efflux MFS transporter Mef(En2)	CP036491.1	640992	642197
GCA_004328515.1	GCA_004328515.1_02885	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP036491.1	3440997	3441812
GCA_004328515.1	GCA_004328515.1_02997	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP036491.1	3557413	3558228
GCA_006540355.1	GCA_006540355.1_00054	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	RIYT01000011.1	24591	25880
GCA_006540355.1	GCA_006540355.1_00055	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	RIYT01000011.1	25898	26299
GCA_006540355.1	GCA_006540355.1_00128	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	354	459	77.12	99.72	354	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NA	NA	RIYT01000016.1	4205	5269
GCA_006540355.1	GCA_006540355.1_00971	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	RIYT01000023.1	135	1574
GCA_006540355.1	GCA_006540355.1_01354	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	RIYT01000002.1	412826	413899
GCA_006540355.1	GCA_006540355.1_02383	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	RIYT01000007.1	60394	61683
GCA_020735605.1	GCA_020735605.1_03219	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP085927.1	3814637	3816562
GCA_030296035.1	GCA_030296035.1_00392	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP027369.1	421958	422368
GCA_030296035.1	GCA_030296035.1_01958	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	AP027369.1	2100192	2101046
GCA_027685745.1	GCA_027685745.1_00417	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQCTW010000001.1	452177	453640
GCA_027685745.1	GCA_027685745.1_00418	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQCTW010000001.1	453760	454977
GCA_002999555.1	GCA_002999555.1_00437	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	PVSZ01000013.1	70339	71070
GCA_002999555.1	GCA_002999555.1_01073	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.28	639	WP_011860841.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	PVSZ01000002.1	29736	31655
GCA_017565785.1	GCA_017565785.1_00234	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAGEKB010000001.1	239271	241190
GCA_017565785.1	GCA_017565785.1_01597	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	78.25	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAGEKB010000002.1	126753	128231
GCA_000180595.1	GCA_000180595.1_00212	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CACL01000024.1	1954	2859
GCA_000180595.1	GCA_000180595.1_00489	blaTEM	TEM family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	286	286	100.00	98.95	286	WP_000027050.1	broad-spectrum class A beta-lactamase TEM-116	NF000531.2	TEM family class A beta-lactamase	CACL01000016.1	752	1612
GCA_000180595.1	GCA_000180595.1_00536	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CACL01000016.1	39407	40933
GCA_000180595.1	GCA_000180595.1_00872	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	271	271	100.00	99.26	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CACL01000010.1	118	933
GCA_013276315.1	GCA_013276315.1_01554	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMKU01000056.1	458	1591
GCA_013276315.1	GCA_013276315.1_01714	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMKU01000061.1	51	1970
GCA_013276315.1	GCA_013276315.1_01715	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	VMKU01000061.1	3077	3814
GCA_003989375.1	GCA_003989375.1_00074	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RBLR01000010.1	78368	79222
GCA_011058715.1	GCA_011058715.1_00927	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP049225.1	917575	919494
GCA_011058715.1	GCA_011058715.1_01002	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	99.80	87.58	491	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP049225.1	1015037	1016515
GCA_003264085.1	GCA_003264085.1_01987	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NAQV01000009.1	76041	76415
GCA_003351565.1	GCA_003351565.1_01282	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP031253.1	1303350	1304255
GCA_003351565.1	GCA_003351565.1_01412	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	418	412	100.00	93.78	418	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP031253.1	1463693	1464949
GCA_003351565.1	GCA_003351565.1_01413	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP031253.1	1465196	1465828
GCA_003351565.1	GCA_003351565.1_01661	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP031253.1	1699565	1701091
GCA_005696855.1	GCA_005696855.1_02409	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	282	284	98.94	55.87	281	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP040007.1	2629296	2630144
GCA_015262435.1	GCA_015262435.1_01123	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JABZSV010000028.1	30937	31902
GCA_015262435.1	GCA_015262435.1_01506	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JABZSV010000037.1	14809	16734
GCA_015262435.1	GCA_015262435.1_01550	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZSV010000003.1	10593	11783
GCA_019929185.1	GCA_019929185.1_00999	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAHZPC010000002.1	227250	228986
GCA_019929185.1	GCA_019929185.1_01000	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.39	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAHZPC010000002.1	228988	230712
GCA_019929185.1	GCA_019929185.1_01552	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHZPC010000005.1	19460	21100
GCA_002075815.1	GCA_002075815.1_00765	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP017257.1	772798	774177
GCA_002075815.1	GCA_002075815.1_01510	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP017257.1	1534940	1535845
GCA_002075815.1	GCA_002075815.1_01638	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.06	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP017257.1	1672415	1673653
GCA_002075815.1	GCA_002075815.1_01639	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP017257.1	1674057	1674689
GCA_002075815.1	GCA_002075815.1_01641	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP017257.1	1675514	1677082
GCA_002075815.1	GCA_002075815.1_01846	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	508	99.61	97.83	506	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP017257.1	1890053	1891576
GCA_006771025.1	GCA_006771025.1_00294	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	305	97.38	54.79	303	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP025061.1	333295	334215
GCA_009707975.1	GCA_009707975.1_01502	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	VHIS01000038.1	1644	2090
GCA_009707975.1	GCA_009707975.1_01503	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VHIS01000038.1	2822	3676
GCA_902373875.1	GCA_902373875.1_00003	tet(C)	tetracycline efflux MFS transporter Tet(C)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	372	396	93.94	99.73	372	WP_001297013.1	tetracycline efflux MFS transporter Tet(C)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CABKNT010000002.1	40	1158
GCA_902373875.1	GCA_902373875.1_02138	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	117	123	100.00	43.09	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABKNT010000006.1	1105901	1106254
GCA_001809235.1	GCA_001809235.1_02581	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.97	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV796812.1	40752	42176
GCA_030515635.1	GCA_030515635.1_02273	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	95.42	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100361.1	2454684	2455538
GCA_030515635.1	GCA_030515635.1_02282	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP100361.1	2463421	2464272
GCA_030515635.1	GCA_030515635.1_02297	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP100361.1	2478454	2479629
GCA_015561235.1	GCA_015561235.1_00605	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JADMTC010000001.1	562294	562722
GCA_015561235.1	GCA_015561235.1_01347	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JADMTC010000001.1	1287917	1288654
GCA_015561235.1	GCA_015561235.1_01359	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JADMTC010000001.1	1298572	1300491
GCA_000011505.1	GCA_000011505.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	BX571856.1	40165	40569
GCA_000011505.1	GCA_000011505.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	BX571856.1	40786	41529
GCA_000011505.1	GCA_000011505.1_00041	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	BX571856.1	44919	46925
GCA_000011505.1	GCA_000011505.1_00042	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	BX571856.1	47025	48782
GCA_000011505.1	GCA_000011505.1_00043	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	114	123	92.68	100.00	114	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	BX571856.1	48782	49126
GCA_000011505.1	GCA_000011505.1_00052	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BX571856.1	55890	56621
GCA_000011505.1	GCA_000011505.1_00053	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BX571856.1	56747	57529
GCA_000011505.1	GCA_000011505.1_00139	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	BX571856.1	152859	154217
GCA_000011505.1	GCA_000011505.1_00330	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	BX571856.1	376571	377926
GCA_000011505.1	GCA_000011505.1_00703	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	BX571856.1	736085	736399
GCA_000011505.1	GCA_000011505.1_00704	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BX571856.1	736399	737688
GCA_000011505.1	GCA_000011505.1_00705	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	BX571856.1	737706	738101
GCA_000011505.1	GCA_000011505.1_00729	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	BX571856.1	756943	758376
GCA_000011505.1	GCA_000011505.1_01760	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BX571856.1	1796513	1797244
GCA_000011505.1	GCA_000011505.1_01761	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BX571856.1	1797370	1798152
GCA_000011505.1	GCA_000011505.1_01860	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	BX571856.1	1911593	1911973
GCA_000011505.1	GCA_000011505.1_01861	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.49	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	BX571856.1	1911963	1913720
GCA_000011505.1	GCA_000011505.1_01862	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	BX571856.1	1913827	1914672
GCA_000011505.1	GCA_000011505.1_01887	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BX571856.1	1946500	1947792
GCA_000011505.1	GCA_000011505.1_01934	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.06	238	ABD30999.1	serine protease SplE	NA	NA	BX571856.1	1986657	1987373
GCA_000011505.1	GCA_000011505.1_01947	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	BX571856.1	1996356	1997111
GCA_000011505.1	GCA_000011505.1_01948	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	BX571856.1	1997150	1997935
GCA_000011505.1	GCA_000011505.1_01949	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	BX571856.1	1998089	1998817
GCA_000011505.1	GCA_000011505.1_01950	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.65	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	BX571856.1	1998852	1999571
GCA_000011505.1	GCA_000011505.1_02106	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	BX571856.1	2125750	2126100
GCA_000011505.1	GCA_000011505.1_02111	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	BX571856.1	2128315	2128806
GCA_000011505.1	GCA_000011505.1_02115	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	257	257	100.00	98.05	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	BX571856.1	2130516	2131289
GCA_000011505.1	GCA_000011505.1_02188	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	BX571856.1	2183697	2183831
GCA_000011505.1	GCA_000011505.1_02515	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	BX571856.1	2488459	2488878
GCA_000011505.1	GCA_000011505.1_02610	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	BX571856.1	2583121	2584086
GCA_000011505.1	GCA_000011505.1_02611	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	BX571856.1	2584636	2585583
GCA_000011505.1	GCA_000011505.1_02612	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	BX571856.1	2585585	2586562
GCA_000011505.1	GCA_000011505.1_02824	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	BX571856.1	2811800	2813329
GCA_000011505.1	GCA_000011505.1_02859	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	BX571856.1	2854437	2855489
GCA_000011505.1	GCA_000011505.1_02882	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.97	1183	BAB96477.1	collagen adhesin Cna	NA	NA	BX571856.1	2876788	2880339
GCA_030875795.1	GCA_030875795.1_00251	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP132899.1	272469	272795
GCA_030875795.1	GCA_030875795.1_00580	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	298	300	98.67	39.73	297	WP_005795628.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP132899.1	640963	641859
GCA_030875795.1	GCA_030875795.1_03545	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP132899.1	3998492	4000417
GCA_024968285.1	GCA_024968285.1_00206	nanH	exo-alpha-sialidase NanH	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	735	721	100.00	100.00	721	ARB89035.1	exo-alpha-sialidase NanH	NA	NA	CP103889.1	212594	214801
GCA_024968285.1	GCA_024968285.1_00508	spaF	SpaD fimbrial tip protein SpaF	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1039	1039	100.00	100.00	1039	CAE48743.1	SpaD fimbrial tip protein SpaF	NA	NA	CP103889.1	522349	525468
GCA_024968285.1	GCA_024968285.1_00509	spaE	SpaD fimbrial minor subunit SpaE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	270	263	100.00	100.00	263	CAE48742.1	SpaD fimbrial minor subunit SpaE	NA	NA	CP103889.1	525474	526286
GCA_024968285.1	GCA_024968285.1_00510	srtC	class C sortase SrtC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	CAE48741.1	class C sortase SrtC	NA	NA	CP103889.1	526258	527196
GCA_024968285.1	GCA_024968285.1_00511	spaD	SpaD fimbrial major subunit SpaD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	490	490	100.00	100.00	490	CAE48740.1	SpaD fimbrial major subunit SpaD	NA	NA	CP103889.1	527297	528769
GCA_024968285.1	GCA_024968285.1_00845	spaG	SpaH fimbrial tip protein SpaG	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1375	1375	100.00	100.00	1375	CAE50754.1	SpaH fimbrial tip protein SpaG	NA	NA	CP103889.1	859312	863439
GCA_024968285.1	GCA_024968285.1_00846	spaH	SpaH fimbrial major subunit SpaH	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	555	555	100.00	100.00	555	CAE50753.1	SpaH fimbrial major subunit SpaH	NA	NA	CP103889.1	863543	865210
GCA_024968285.1	GCA_024968285.1_00847	srtD	SpaH fimbrial biogenesis class C sortase SrtD	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	318	318	100.00	100.00	318	CAE50752.1	SpaH fimbrial biogenesis class C sortase SrtD	NA	NA	CP103889.1	865400	866356
GCA_024968285.1	GCA_024968285.1_00848	srtE	SpaH fimbrial biogenesis class C sortase SrtE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	335	348	96.26	99.70	335	CAE50751.1	SpaH fimbrial biogenesis class C sortase SrtE	NA	NA	CP103889.1	866379	867386
GCA_024968285.1	GCA_024968285.1_00849	spaI	SpaH fimbrial minor subunit SpaI	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	269	269	100.00	100.00	269	CAE50750.1	SpaH fimbrial minor subunit SpaI	NA	NA	CP103889.1	867459	868268
GCA_024968285.1	GCA_024968285.1_00982	cbpA	type I collagen-binding adhesin CbpA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1088	951	90.22	99.88	858	CAE50621.1	type I collagen-binding adhesin CbpA	NA	NA	CP103889.1	1034481	1037747
GCA_024968285.1	GCA_024968285.1_01053	spaA	SpaA fimbrial major subunit SpaA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	525	525	100.00	100.00	525	CAE50544.1	SpaA fimbrial major subunit SpaA	NA	NA	CP103889.1	1111123	1112700
GCA_024968285.1	GCA_024968285.1_01054	srtA	class C sortase SrtA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	289	289	100.00	100.00	289	CAE50543.1	class C sortase SrtA	NA	NA	CP103889.1	1112701	1113570
GCA_024968285.1	GCA_024968285.1_01055	spaB	SpaA fimbrial minor subunit SpaB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	205	205	100.00	100.00	205	CAE50542.1	SpaA fimbrial minor subunit SpaB	NA	NA	CP103889.1	1113560	1114177
GCA_024968285.1	GCA_024968285.1_01056	spaC	SpaA fimbrial minor subunit SpaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1872	1872	100.00	99.95	1872	CAE50541.1	SpaA fimbrial minor subunit SpaC	NA	NA	CP103889.1	1114181	1119799
GCA_900087685.2	GCA_900087685.2_00235	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	301	301	100.00	100.00	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	LT592161.1	248466	249371
GCA_900087685.2	GCA_900087685.2_00507	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	99.78	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	LT592161.1	502303	503682
GCA_900087685.2	GCA_900087685.2_01423	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	99.51	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	LT592161.1	1372850	1374088
GCA_900087685.2	GCA_900087685.2_01424	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	210	210	100.00	100.00	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	LT592161.1	1374338	1374970
GCA_900087685.2	GCA_900087685.2_01426	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	100.00	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	LT592161.1	1375607	1377175
GCA_900087685.2	GCA_900087685.2_01782	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	507	100.00	99.41	507	AAD54074.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	LT592161.1	1706447	1707970
GCA_019330165.1	GCA_019330165.1_00091	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073893.1	92294	94300
GCA_019330165.1	GCA_019330165.1_00092	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073893.1	94400	96157
GCA_019330165.1	GCA_019330165.1_00093	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073893.1	96157	96528
GCA_019330165.1	GCA_019330165.1_00139	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073893.1	135494	135832
GCA_019330165.1	GCA_019330165.1_00140	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073893.1	135890	137533
GCA_019330165.1	GCA_019330165.1_00141	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073893.1	137615	138265
GCA_019330165.1	GCA_019330165.1_00151	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073893.1	147051	148349
GCA_019330165.1	GCA_019330165.1_00154	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073893.1	150518	150865
GCA_019330165.1	GCA_019330165.1_00231	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073893.1	233503	233739
GCA_019330165.1	GCA_019330165.1_00282	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073893.1	291537	292604
GCA_019330165.1	GCA_019330165.1_01768	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073893.1	1807682	1808062
GCA_019330165.1	GCA_019330165.1_01769	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073893.1	1808052	1809809
GCA_019330165.1	GCA_019330165.1_01770	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073893.1	1809916	1810761
GCA_019330165.1	GCA_019330165.1_01791	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073893.1	1829581	1830222
GCA_019330165.1	GCA_019330165.1_01912	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073893.1	1905850	1907289
GCA_019330165.1	GCA_019330165.1_01915	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073893.1	1909045	1909530
GCA_019330165.1	GCA_019330165.1_02741	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073892.1	495	1055
GCA_019330165.1	GCA_019330165.1_02754	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	PARTIALP	390	514	75.88	99.74	390	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NA	NA	CP073892.1	12336	13508
GCA_000256645.1	GCA_000256645.1_00794	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	ADNO01000007.1	300278	301477
GCA_000256645.1	GCA_000256645.1_01169	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	ADNO01000007.1	658438	659088
GCA_000256645.1	GCA_000256645.1_01209	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	ADNO01000007.1	701208	701945
GCA_000256645.1	GCA_000256645.1_01220	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	ADNO01000007.1	711863	713782
GCA_018128125.1	GCA_018128125.1_01686	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072367.1	1995980	1997170
GCA_024463135.1	GCA_024463135.1_00292	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.15	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANGCW010000011.1	9941	11677
GCA_024463135.1	GCA_024463135.1_00293	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.91	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANGCW010000011.1	11679	13403
GCA_024463135.1	GCA_024463135.1_01200	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANGCW010000003.1	73276	74493
GCA_024463135.1	GCA_024463135.1_01201	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANGCW010000003.1	74613	76076
GCA_000281755.1	GCA_000281755.1_00370	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	140	139	99.28	99.28	138	WP_004146118.1	FosA5 family fosfomycin resistance glutathione transferase	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	AJJI01000003.1	13753	14175
GCA_000281755.1	GCA_000281755.1_01410	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	410	410	100.00	100.00	410	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	AJJI01000007.1	319107	320339
GCA_000281755.1	GCA_000281755.1_02128	blaSHV	SHV family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	322	286	100.00	100.00	286	WP_001620095.1	broad-spectrum class A beta-lactamase SHV-1	NF000285.3	SHV family class A beta-lactamase	AJJI01000010.1	181253	182221
GCA_000281755.1	GCA_000281755.1_02494	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	116	102	100.00	56.91	123	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	AJJI01000010.1	540300	540650
GCA_000281755.1	GCA_000281755.1_02936	clbB	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	3206	3206	100.00	99.66	3206	AMQ58400.1	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	NA	NA	AJJI01000014.1	18795	28415
GCA_000281755.1	GCA_000281755.1_03518	oqxA10	multidrug efflux RND transporter periplasmic adaptor subunit OqxA10	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	ALLELEP	391	391	100.00	100.00	391	WP_004149398.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA10	NF000272.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	AJJI01000014.1	644370	645545
GCA_000281755.1	GCA_000281755.1_03519	oqxB19	multidrug efflux RND transporter permease subunit OqxB19	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	ALLELEP	1050	1050	100.00	100.00	1050	WP_004149399.1	multidrug efflux RND transporter permease subunit OqxB19	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	AJJI01000014.1	645569	648721
GCA_000281755.1	GCA_000281755.1_03858	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	140	141	98.58	77.70	139	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	AJJI01000014.1	993867	994289
GCA_000281755.1	GCA_000281755.1_03873	crcB	fluoride efflux transporter CrcB	plus	STRESS	BIOCIDE	FLUORIDE	FLUORIDE	EXACTP	137	137	100.00	100.00	137	CCN31428.1	fluoride efflux transporter CrcB	NA	NA	AJJI01000014.1	1005457	1005870
GCA_000281755.1	GCA_000281755.1_04710	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	98.98	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	AJJI01000016.1	19931	21115
GCA_000281755.1	GCA_000281755.1_04848	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	AJJI01000017.1	58545	59447
GCA_000281755.1	GCA_000281755.1_05084	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	391	371	95.96	89.33	356	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	AJJI01000024.1	8500	9675
GCA_000281755.1	GCA_000281755.1_05085	rmpC	mucoid phenotype regulator RmpC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	183	133	100.00	88.72	133	AIK83625.1	mucoid phenotype regulator RmpC	NA	NA	AJJI01000024.1	10250	10801
GCA_000281755.1	GCA_000281755.1_05086	rmpA	mucoid phenotype regulator RmpA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	210	210	100.00	98.10	210	AMA27886.1	mucoid phenotype regulator RmpA	NA	NA	AJJI01000024.1	11190	11822
GCA_000281755.1	GCA_000281755.1_05147	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.83	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	AJJI01000025.1	38087	39889
GCA_000281755.1	GCA_000281755.1_05148	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	570	600	95.00	99.30	570	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	AJJI01000025.1	39876	41588
GCA_000281755.1	GCA_000281755.1_05179	clbN	colibactin non-ribosomal peptide synthetase ClbN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1455	1455	100.00	99.59	1455	AMH08480.1	colibactin non-ribosomal peptide synthetase ClbN	NA	NA	AJJI01000025.1	89488	93855
GCA_000507745.1	GCA_000507745.1_00664	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KI669394.1	703191	705110
GCA_000507745.1	GCA_000507745.1_00665	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	KI669394.1	706217	706954
GCA_000507745.1	GCA_000507745.1_01033	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KI669394.1	1079582	1080010
GCA_000507745.1	GCA_000507745.1_01569	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KI669395.1	157607	159247
GCA_019929905.1	GCA_019929905.1_00378	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHZQL010000001.1	392688	393116
GCA_000258265.1	GCA_000258265.1_01395	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AJKE01000066.1	59526	60743
GCA_000258265.1	GCA_000258265.1_01396	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AJKE01000066.1	60764	62227
GCA_000185365.1	GCA_000185365.1_02033	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	GL622241.1	2128897	2131011
GCA_022690045.1	GCA_022690045.1_00152	fosB	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_032488468.1	fosfomycin resistance bacillithiol transferase FosB	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	JALCWE010000012.1	15924	16343
GCA_022690045.1	GCA_022690045.1_01799	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWE010000004.1	98492	98839
GCA_022690045.1	GCA_022690045.1_01803	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWE010000004.1	102522	103814
GCA_947252375.1	GCA_947252375.1_00469	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_063856405.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CAMXVF010000002.1	194262	196181
GCA_947252375.1	GCA_947252375.1_01447	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	99.80	89.82	491	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAMXVF010000015.1	296	1774
GCA_000614665.1	GCA_000614665.1_00495	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	391	371	95.96	89.33	356	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	BAKZ01000109.1	8101	9276
GCA_000614665.1	GCA_000614665.1_01182	clbN	colibactin non-ribosomal peptide synthetase ClbN	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	812	1455	54.50	99.50	793	AMH08480.1	colibactin non-ribosomal peptide synthetase ClbN	NA	NA	BAKZ01000074.1	15096	17534
GCA_000614665.1	GCA_000614665.1_01776	blaSHV	SHV family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	322	286	100.00	100.00	286	WP_001620095.1	broad-spectrum class A beta-lactamase SHV-1	NF000285.3	SHV family class A beta-lactamase	BAKZ01000055.1	4258	5226
GCA_000614665.1	GCA_000614665.1_01823	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	140	139	99.28	99.28	138	WP_004146118.1	FosA5 family fosfomycin resistance glutathione transferase	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	BAKZ01000054.1	8615	9037
GCA_000614665.1	GCA_000614665.1_02102	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	411	600	66.83	99.50	401	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	BAKZ01000047.1	3608	4843
GCA_000614665.1	GCA_000614665.1_02103	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	551	600	91.50	99.27	549	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	BAKZ01000047.1	4830	6485
GCA_000614665.1	GCA_000614665.1_02469	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1078	1050	99.90	100.00	1049	WP_004149399.1	multidrug efflux RND transporter permease subunit OqxB19	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	BAKZ01000040.1	11444	14680
GCA_000614665.1	GCA_000614665.1_02470	oqxA10	multidrug efflux RND transporter periplasmic adaptor subunit OqxA10	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	ALLELEP	391	391	100.00	100.00	391	WP_004149398.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA10	NF000272.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	BAKZ01000040.1	14704	15879
GCA_000614665.1	GCA_000614665.1_02602	crcB	fluoride efflux transporter CrcB	plus	STRESS	BIOCIDE	FLUORIDE	FLUORIDE	EXACTP	137	137	100.00	100.00	137	CCN31428.1	fluoride efflux transporter CrcB	NA	NA	BAKZ01000038.1	31791	32204
GCA_000614665.1	GCA_000614665.1_02618	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	140	141	98.58	77.70	139	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	BAKZ01000038.1	43370	43792
GCA_000614665.1	GCA_000614665.1_04135	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	PARTIALP	253	300	84.33	99.60	253	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	BAKZ01000017.1	58651	59412
GCA_000614665.1	GCA_000614665.1_04438	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	98.98	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	BAKZ01000014.1	19497	20681
GCA_000614665.1	GCA_000614665.1_05519	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	393	410	95.85	100.00	393	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	BAKZ01000006.1	70954	72135
GCA_024204925.1	GCA_024204925.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP093205.1	37713	39719
GCA_024204925.1	GCA_024204925.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP093205.1	39819	40805
GCA_024204925.1	GCA_024204925.1_00128	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP093205.1	142108	143397
GCA_024204925.1	GCA_024204925.1_00131	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP093205.1	145575	145922
GCA_024204925.1	GCA_024204925.1_00205	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP093205.1	233704	234132
GCA_024204925.1	GCA_024204925.1_00933	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093205.1	978170	979015
GCA_024204925.1	GCA_024204925.1_00934	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093205.1	979122	980879
GCA_024204925.1	GCA_024204925.1_00935	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093205.1	980869	981249
GCA_024204925.1	GCA_024204925.1_02544	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	CP093207.1	588	911
GCA_016613425.1	GCA_016613425.1_00770	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAEHFL010000015.1	25836	26690
GCA_016613425.1	GCA_016613425.1_01352	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JAEHFL010000027.1	772	1191
GCA_016613425.1	GCA_016613425.1_01353	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAEHFL010000027.1	1191	2027
GCA_016613425.1	GCA_016613425.1_01355	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAEHFL010000027.1	2231	3406
GCA_016613425.1	GCA_016613425.1_01723	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAEHFL010000049.1	94	909
GCA_016613425.1	GCA_016613425.1_02332	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAEHFL010000009.1	68929	70353
GCA_027321625.1	GCA_027321625.1_00156	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	302	98.01	72.24	299	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	DAHVJB010000010.1	14359	15276
GCA_027321625.1	GCA_027321625.1_00878	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	133	98.50	71.97	132	WP_063851233.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	DAHVJB010000064.1	22942	23361
GCA_015546995.1	GCA_015546995.1_00384	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADMUH010000018.1	3774	5237
GCA_015546995.1	GCA_015546995.1_00385	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADMUH010000018.1	5357	6574
GCA_019748915.1	GCA_019748915.1_00810	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	493	494	99.60	65.11	493	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JACLCC010000014.1	99309	100790
GCA_019748915.1	GCA_019748915.1_03278	arsN1	arsinothricin resistance N-acetyltransferase ArsN1 family A	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	165	169	94.67	66.88	160	AIQ64103.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	NF040503.1	arsinothricin resistance N-acetyltransferase ArsN1 family A	JACLCC010000031.1	42207	42704
GCA_000832825.1	GCA_000832825.1_00040	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	57.41	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP009600.1	43135	43785
GCA_000832825.1	GCA_000832825.1_00157	bla	class A beta-lactamase Bla1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	306	309	99.03	94.12	306	WP_011053164.1	class A beta-lactamase Bla1	NF033096.1	class A beta-lactamase Bla1	CP009600.1	153661	154581
GCA_000832825.1	GCA_000832825.1_00181	hlyII	hemolysin II HlyII	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	412	412	100.00	95.63	412	AAP10457.1	hemolysin II HlyII	NA	NA	CP009600.1	178570	179808
GCA_000832825.1	GCA_000832825.1_00182	hlyIIR	hemolysin II regulator HlyIIR	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	201	201	100.00	98.01	201	AAO74585.1	hemolysin II regulator HlyIIR	NA	NA	CP009600.1	180216	180821
GCA_000832825.1	GCA_000832825.1_00183	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	81.91	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP009600.1	180944	182422
GCA_000832825.1	GCA_000832825.1_00277	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	210	216	95.83	65.38	208	WP_063856935.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP009600.1	276868	277500
GCA_000832825.1	GCA_000832825.1_00746	hblA	hemolytic enterotoxin HBL binding subunit HblA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	466	466	100.00	96.78	466	CAB64770.1	hemolytic enterotoxin HBL binding subunit HblA	NA	NA	CP009600.1	704182	705582
GCA_000832825.1	GCA_000832825.1_00747	hblB	hemolytic enterotoxin HBL binding subunit HblB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	375	375	100.00	98.67	375	AAP10046.1	hemolytic enterotoxin HBL binding subunit HblB	NA	NA	CP009600.1	705959	707086
GCA_000832825.1	GCA_000832825.1_00748	hblD	hemolytic enterotoxin HBL lytic component L1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	406	406	100.00	99.51	406	AAP10047.1	hemolytic enterotoxin HBL lytic component L1	NA	NA	CP009600.1	707123	708343
GCA_000832825.1	GCA_000832825.1_00749	hblC	hemolytic enterotoxin HBL lytic component L2	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	439	439	100.00	98.18	439	AAP10048.1	hemolytic enterotoxin HBL lytic component L2	NA	NA	CP009600.1	708405	709724
GCA_000832825.1	GCA_000832825.1_00861	vanS-Pt	vancomycin resistance histidine kinase VanS-Pt	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	384	386	99.48	90.36	384	WP_063856741.1	vancomycin resistance histidine kinase VanS-Pt	NF033091.0	vancomycin resistance histidine kinase VanS	CP009600.1	833539	834693
GCA_000832825.1	GCA_000832825.1_00862	vanR-A	vancomycin resistance response regulator transcription factor VanR-A	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	231	231	100.00	92.21	231	WP_063856721.1	vancomycin resistance response regulator transcription factor VanR-A	NF000401.1	vancomycin resistance response regulator transcription factor VanR-A	CP009600.1	834683	835378
GCA_000832825.1	GCA_000832825.1_00925	alo	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	512	512	100.00	98.44	512	AAP27127.1	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	NA	NA	CP009600.1	899610	901148
GCA_000832825.1	GCA_000832825.1_01054	bla2	BcII family subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	256	256	100.00	93.36	256	WP_000799223.1	BcII family subclass B1 metallo-beta-lactamase	NF033095.1	BcII family subclass B1 metallo-beta-lactamase	CP009600.1	1022263	1023033
GCA_000832825.1	GCA_000832825.1_01359	plcA	phosphatidylinositol diacylglycerol-lyase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	329	329	100.00	95.14	329	AAP10686.1	phosphatidylinositol diacylglycerol-lyase	NA	NA	CP009600.1	1327430	1328419
GCA_000832825.1	GCA_000832825.1_02875	bpsC	UTP--glucose-1-phosphate uridylyltransferase BpsC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	291	295	97.97	89.27	289	AJI07989.1	UTP--glucose-1-phosphate uridylyltransferase BpsC	NA	NA	CP009600.1	2773796	2774671
GCA_000832825.1	GCA_000832825.1_03798	inhA2	M6 family metalloprotease immune inhibitor InhA2	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	799	799	100.00	99.62	799	AAP24685.1	M6 family metalloprotease immune inhibitor InhA2	NA	NA	CP009600.1	3704838	3707237
GCA_000832825.1	GCA_000832825.1_03802	cerA	phospholipase CerA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	283	100.00	98.59	283	AAS39677.1	phospholipase CerA	NA	NA	CP009600.1	3710695	3711546
GCA_000832825.1	GCA_000832825.1_03803	sph	sphingomyelinase C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	333	338	98.52	99.40	333	AAP24691.1	sphingomyelinase C	NA	NA	CP009600.1	3711620	3712621
GCA_000832825.1	GCA_000832825.1_04415	inhA1	M6 family metalloprotease immune inhibitor InhA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	795	796	100.00	96.73	796	ADH05944.1	M6 family metalloprotease immune inhibitor InhA1	NA	NA	CP009600.1	4295533	4297920
GCA_000832825.1	GCA_000832825.1_04695	mphL	macrolide 2-phosphotransferase MphL	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	298	303	98.35	87.25	298	WP_002047670.1	macrolide 2-phosphotransferase MphL	NF038057.1	macrolide 2-phosphotransferase MphL	CP009600.1	4550021	4550917
GCA_000832825.1	GCA_000832825.1_04949	nheA	non-hemolytic enterotoxin NHE subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	386	386	100.00	96.89	386	AAS40892.1	non-hemolytic enterotoxin NHE subunit A	NA	NA	CP009600.1	4808239	4809399
GCA_000832825.1	GCA_000832825.1_04950	nheB	non-hemolytic enterotoxin NHE subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	402	402	100.00	99.00	402	AAS40893.1	non-hemolytic enterotoxin NHE subunit B	NA	NA	CP009600.1	4809436	4810644
GCA_000832825.1	GCA_000832825.1_04951	nheC	non-hemolytic enterotoxin NHE subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	359	359	100.00	97.21	359	AAS40894.1	non-hemolytic enterotoxin NHE subunit C	NA	NA	CP009600.1	4810872	4811951
GCA_000832825.1	GCA_000832825.1_05015	entFM	enterotoxin EntFM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	420	421	100.00	97.86	421	AFH83235.1	enterotoxin EntFM	NF040678.1	enterotoxin EntFM	CP009600.1	4878868	4880130
GCA_000832825.1	GCA_000832825.1_05093	fosB	FosBx1 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	138	100.00	89.86	138	WP_000943772.1	FosBx1 family fosfomycin resistance bacillithiol transferase	NF041541.1	FosBx1 family fosfomycin resistance bacillithiol transferase	CP009600.1	4954606	4955022
GCA_003605455.1	GCA_003605455.1_02265	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RAHZ01000092.1	13395	14816
GCA_018376955.1	GCA_018376955.1_02013	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	PARTIALP	343	492	69.72	90.67	343	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NA	NA	JAHAAI010000019.1	1612	2643
GCA_009730315.1	GCA_009730315.1_01424	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_004632336.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP046314.1	1475987	1477906
GCA_009730315.1	GCA_009730315.1_01425	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP046314.1	1479013	1479750
GCA_001454905.1	GCA_001454905.1_00096	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	383	388	98.71	95.30	383	AEO26812.1	class 3 internalin InlP	NA	NA	CP013288.1	94113	95264
GCA_001454905.1	GCA_001454905.1_00867	vip	cell invasion LPXTG protein Vip	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	418	399	100.00	83.25	418	AEO24620.1	cell invasion LPXTG protein Vip	NF033201.1	cell invasion LPXTG protein Vip	CP013288.1	853332	854588
GCA_001454905.1	GCA_001454905.1_00879	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1775	1778	100.00	93.59	1778	AEO24631.1	class 1 internalin InlI	NA	NA	CP013288.1	871160	876487
GCA_001454905.1	GCA_001454905.1_01006	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	36.55	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA	CP013288.1	984110	986512
GCA_001454905.1	GCA_001454905.1_01007	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	93.65	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA	CP013288.1	986597	988489
GCA_001454905.1	GCA_001454905.1_01010	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	92.68	205	AEO24735.1	nuclear targeted protein LntA	NA	NA	CP013288.1	990189	990806
GCA_001454905.1	GCA_001454905.1_01079	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	609	605	100.00	94.14	614	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA	CP013288.1	1055769	1057598
GCA_001454905.1	GCA_001454905.1_01493	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	97.90	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP013288.1	1457369	1458940
GCA_001454905.1	GCA_001454905.1_01857	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	606	598	100.00	90.76	606	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK	CP013288.1	1793853	1795673
GCA_001454905.1	GCA_001454905.1_02312	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	133	133	100.00	100.00	133	WP_003726635.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	CP013288.1	2244002	2244403
GCA_001454905.1	GCA_001454905.1_02401	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	96.62	296	AHJ03495.1	class 3 internalin InlC	NA	NA	CP013288.1	2337488	2338381
GCA_001454905.1	GCA_001454905.1_02877	arsD2	arsenite efflux transporter metallochaperone ArsD-related protein	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	103	103	100.00	100.00	103	EGJ25779.1	arsenite efflux transporter metallochaperone ArsD-related protein	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP013288.1	2810532	2810843
GCA_001454905.1	GCA_001454905.1_02878	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	579	579	100.00	100.00	579	EGJ25780.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP013288.1	2810863	2812602
GCA_001454905.1	GCA_001454905.1_02879	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	97	97	100.00	100.00	97	EGO5141043.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP013288.1	2812693	2812986
GCA_001454905.1	GCA_001454905.1_02880	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	123	123	100.00	100.00	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP013288.1	2812988	2813359
GCA_001454905.1	GCA_001454905.1_02881	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	121	121	100.00	100.00	121	EGJ25783.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP013288.1	2813492	2813857
GCA_001454905.1	GCA_001454905.1_02882	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	580	580	100.00	100.00	580	EGJ25784.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP013288.1	2813893	2815635
GCA_001454905.1	GCA_001454905.1_02883	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	357	359	99.44	100.00	357	EGJ25785.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP013288.1	2815721	2816794
GCA_001454905.1	GCA_001454905.1_02884	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	348	351	99.15	99.71	348	EGJ25786.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP013288.1	2816833	2817879
GCA_001454905.1	GCA_001454905.1_02889	cadC	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	118	118	100.00	100.00	118	EGJ25791.1	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP013288.1	2821892	2822248
GCA_001454905.1	GCA_001454905.1_02890	cadA	cadmium-translocating P-type ATPase CadA	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	700	700	100.00	100.00	700	EGJ25792.1	cadmium-translocating P-type ATPase CadA	NA	NA	CP013288.1	2822265	2824367
GCA_009379475.1	GCA_009379475.1_01302	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCKM01000005.1	83929	84870
GCA_002285155.1	GCA_002285155.1_00249	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NSGL01000001.1	294170	295591
GCA_002285155.1	GCA_002285155.1_00255	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	NSGL01000001.1	301413	302267
GCA_030408355.1	GCA_030408355.1_00794	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP046606.1	838081	838935
GCA_005519305.1	GCA_005519305.1_01072	blaOXA-817	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-817	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	273	273	100.00	100.00	273	WP_075040046.1	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-817	NF000266.2	OXA-23 family carbapenem-hydrolyzing class D beta-lactamase	CP038022.1	1120819	1121640
GCA_005519305.1	GCA_005519305.1_01796	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	287	285	97.54	40.14	284	WP_063864745.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	CP038022.1	1883770	1884633
GCA_005519305.1	GCA_005519305.1_01980	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	397	97.98	77.38	389	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	CP038022.1	2078982	2080169
GCA_025146415.1	GCA_025146415.1_01024	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP102257.1	1322565	1324490
GCA_025146415.1	GCA_025146415.1_02579	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	408	99.26	98.77	405	WP_012102963.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP102257.1	3232431	3233648
GCA_025146415.1	GCA_025146415.1_02581	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	219	212	93.40	65.83	199	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP102257.1	3234499	3235158
GCA_025146415.1	GCA_025146415.1_02584	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	225	244	91.80	96.43	224	WP_014387027.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP102257.1	3236131	3236808
GCA_025146415.1	GCA_025146415.1_03749	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	308	300	98.00	51.85	297	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP102257.1	4507297	4508223
GCA_000191485.1	GCA_000191485.1_00344	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP002422.1	346681	348207
GCA_000191485.1	GCA_000191485.1_00843	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.86	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP002422.1	865881	867260
GCA_000191485.1	GCA_000191485.1_01590	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP002422.1	1644849	1645754
GCA_000191485.1	GCA_000191485.1_01710	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.15	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP002422.1	1781162	1782400
GCA_000191485.1	GCA_000191485.1_01711	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP002422.1	1782647	1783279
GCA_000191485.1	GCA_000191485.1_01713	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP002422.1	1784104	1785672
GCA_003943045.1	GCA_003943045.1_00316	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJOJ01000001.1	308944	310407
GCA_003943045.1	GCA_003943045.1_00317	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJOJ01000001.1	310527	311744
GCA_000263575.1	GCA_000263575.1_00261	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	ADEP01000004.1	94399	95877
GCA_029926565.1	GCA_029926565.1_00025	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAREHA010000011.1	2713	3027
GCA_029926565.1	GCA_029926565.1_00026	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHA010000011.1	3027	4316
GCA_029926565.1	GCA_029926565.1_00027	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREHA010000011.1	4334	4735
GCA_029926565.1	GCA_029926565.1_01568	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHA010000002.1	287652	288944
GCA_019391885.1	GCA_019391885.1_01594	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXRE010000003.1	126455	127645
GCA_900453115.1	GCA_900453115.1_02477	icr-Mo	phosphoethanolamine--lipid A transferase ICR-Mo	plus	AMR	AMR	COLISTIN	COLISTIN	BLASTP	548	558	98.21	100.00	548	WP_082741435.1	phosphoethanolamine--lipid A transferase ICR-Mo	NA	NA	UGPY01000001.1	2377920	2379566
GCA_000338095.1	GCA_000338095.1_00654	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.34	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP004085.1	742069	743490
GCA_000338095.1	GCA_000338095.1_01554	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP004085.1	1758480	1759295
GCA_000338095.1	GCA_000338095.1_01557	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP004085.1	1760980	1761399
GCA_000338095.1	GCA_000338095.1_01558	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	209	278	75.18	99.52	209	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	CP004085.1	1761606	1762235
GCA_000338095.1	GCA_000338095.1_01559	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP004085.1	1762439	1763614
GCA_000338095.1	GCA_000338095.1_01588	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.16	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP004085.1	1793850	1795631
GCA_000338095.1	GCA_000338095.1_01933	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP004085.1	2190870	2191724
GCA_001815355.1	GCA_001815355.1_00221	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV820354.1	34523	36181
GCA_003971305.1	GCA_003971305.1_01517	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	CP034665.1	1612219	1613160
GCA_902461015.1	GCA_902461015.1_00277	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABPWA010000002.1	88085	90004
GCA_902461015.1	GCA_902461015.1_00668	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.06	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CABPWA010000006.1	3027	4505
GCA_015260455.1	GCA_015260455.1_00096	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JABZWR010000064.1	63	1028
GCA_015260455.1	GCA_015260455.1_01176	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZWR010000005.1	61294	62484
GCA_001544095.1	GCA_001544095.1_01848	fosX	FosX/FosE/FosI family fosfomycin resistance hydrolase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	133	95.49	58.59	128	WP_010989789.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase	BCPT01000009.1	33702	34112
GCA_001544095.1	GCA_001544095.1_02956	vanC	D-alanine--D-serine ligase VanC2/3	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	350	350	100.00	100.00	350	WP_060792851.1	D-alanine--D-serine ligase VanC2/3	NF012214.1	D-alanine--D-serine ligase VanC	BCPT01000020.1	302	1354
GCA_001544095.1	GCA_001544095.1_02957	vanXY-C	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	190	190	100.00	100.00	190	WP_060792852.1	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	NF000380.1	D,D-carboxypeptidase/D,D-dipeptidase VanXY	BCPT01000020.1	1351	1923
GCA_001544095.1	GCA_001544095.1_02958	vanTc	membrane-bound serine racemase VanT	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	700	706	100.00	98.73	706	WP_063856758.1	membrane-bound serine racemase VanT	NF033132.1	membrane-bound serine racemase VanT	BCPT01000020.1	1920	4022
GCA_001544095.1	GCA_001544095.1_02959	vanR-C	vancomycin resistance response regulator transcription factor VanR-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	EXACTP	231	231	100.00	100.00	231	WP_005228837.1	vancomycin resistance response regulator transcription factor VanR-C	NF000403.1	vancomycin resistance response regulator transcription factor VanR-C	BCPT01000020.1	4121	4816
GCA_001544095.1	GCA_001544095.1_02960	vanS-C	vancomycin resistance histidine kinase VanS-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	376	376	100.00	99.73	376	WP_034869172.1	vancomycin resistance histidine kinase VanS-C	NF033091.0	vancomycin resistance histidine kinase VanS	BCPT01000020.1	4806	5936
GCA_000517825.1	GCA_000517825.1_00153	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	392	321	93.15	100.00	299	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JACD01000003.1	4	1182
GCA_000517825.1	GCA_000517825.1_00450	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JACD01000007.1	210947	212137
GCA_000517825.1	GCA_000517825.1_01243	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JACD01000052.1	4	969
GCA_001811395.1	GCA_001811395.1_01150	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	KV804669.1	95941	96672
GCA_015832135.1	GCA_015832135.1_03841	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP065406.1	3993878	3995566
GCA_015832135.1	GCA_015832135.1_03842	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP065406.1	3995577	3995864
GCA_015832135.1	GCA_015832135.1_04369	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	84	78	53.85	92.86	42	AAC38236.1	broad-spectrum mercury transporter MerE	NA	NA	CP065408.1	69827	70081
GCA_015832135.1	GCA_015832135.1_04370	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP065408.1	70078	70443
GCA_015832135.1	GCA_015832135.1_04371	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.57	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP065408.1	70461	72146
GCA_015832135.1	GCA_015832135.1_04372	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP065408.1	72218	72493
GCA_015832135.1	GCA_015832135.1_04373	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP065408.1	72506	72856
GCA_015832135.1	GCA_015832135.1_04374	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP065408.1	72928	73362
GCA_003625615.1	GCA_003625615.1_01566	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZGV01000004.1	102961	103902
GCA_008868275.1	GCA_008868275.1_01891	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	WBMF01000007.1	30198	31622
GCA_000722755.1	GCA_000722755.1_01399	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JPFY01000013.1	777222	778421
GCA_959023655.1	GCA_959023655.1_00531	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	91.85	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CAUFCV010000004.1	54879	56615
GCA_959023655.1	GCA_959023655.1_00532	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.29	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CAUFCV010000004.1	56617	58341
GCA_959023655.1	GCA_959023655.1_01735	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CAUFCV010000020.1	31739	32476
GCA_030223765.1	GCA_030223765.1_00009	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JASOSZ010000010.1	6471	8390
GCA_030223765.1	GCA_030223765.1_00072	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.23	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JASOSZ010000012.1	18038	19516
GCA_022689485.1	GCA_022689485.1_00887	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXF010000001.1	249140	250432
GCA_022689485.1	GCA_022689485.1_01535	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXF010000030.1	20554	20973
GCA_022689485.1	GCA_022689485.1_01875	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXF010000004.1	77701	78774
GCA_902484395.1	GCA_902484395.1_01584	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_063844771.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CABTGN010000071.1	1933	2733
GCA_902484395.1	GCA_902484395.1_01585	tet(X1)	tetracycline-inactivating monooxygenase Tet(X1)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	379	379	100.00	99.74	379	WP_204376222.1	tetracycline-inactivating monooxygenase Tet(X1)	NA	NA	CABTGN010000071.1	3039	4178
GCA_902484395.1	GCA_902484395.1_01586	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	378	388	97.42	100.00	378	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	CABTGN010000071.1	4377	5513
GCA_902484395.1	GCA_902484395.1_01587	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	CABTGN010000071.1	5689	6552
GCA_902484395.1	GCA_902484395.1_01816	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	99.71	346	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	CABTGN010000080.1	4162	5202
GCA_946891995.1	GCA_946891995.1_01112	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.65	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAMPNV010000010.1	13074	14552
GCA_000470845.1	GCA_000470845.1_00045	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP003603.1	48133	50139
GCA_000470845.1	GCA_000470845.1_00125	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP003603.1	141731	143089
GCA_000470845.1	GCA_000470845.1_00311	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP003603.1	361689	363044
GCA_000470845.1	GCA_000470845.1_00350	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	94.58	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP003603.1	398538	399149
GCA_000470845.1	GCA_000470845.1_00815	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.59	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP003603.1	866742	867470
GCA_000470845.1	GCA_000470845.1_00816	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	99.59	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP003603.1	867494	868222
GCA_000470845.1	GCA_000470845.1_00836	seb	staphylococcal enterotoxin type B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	AAA88550.1	staphylococcal enterotoxin type B	NA	NA	CP003603.1	878417	879217
GCA_000470845.1	GCA_000470845.1_01450	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP003603.1	1533880	1534857
GCA_000470845.1	GCA_000470845.1_01451	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP003603.1	1534859	1535797
GCA_000470845.1	GCA_000470845.1_01806	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP003603.1	1872538	1873830
GCA_000470845.1	GCA_000470845.1_01841	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP003603.1	1904716	1905066
GCA_000470845.1	GCA_000470845.1_02012	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	96.15	26	AGU62139.1	delta-hemolysin	NA	NA	CP003603.1	2047322	2047456
GCA_000470845.1	GCA_000470845.1_02165	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.92	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP003603.1	2202064	2203506
GCA_000470845.1	GCA_000470845.1_02422	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP003603.1	2442964	2443929
GCA_000470845.1	GCA_000470845.1_02423	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.78	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP003603.1	2444497	2445444
GCA_000470845.1	GCA_000470845.1_02424	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP003603.1	2445446	2446423
GCA_000470845.1	GCA_000470845.1_02566	sey	staphylococcal enterotoxin type Y	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	221	221	100.00	99.55	221	BAS21358.1	staphylococcal enterotoxin type Y	NA	NA	CP003603.1	2593942	2594607
GCA_000470845.1	GCA_000470845.1_02662	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP003603.1	2696735	2698264
GCA_000470845.1	GCA_000470845.1_02698	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP003603.1	2744908	2745960
GCA_000210315.1	GCA_000210315.1_00086	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100296.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP001996.1	100955	102313
GCA_000210315.1	GCA_000210315.1_00361	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.45	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP001996.1	380560	381915
GCA_000210315.1	GCA_000210315.1_00399	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	95.07	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP001996.1	415169	415780
GCA_000210315.1	GCA_000210315.1_00433	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	95.30	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	CP001996.1	443793	444497
GCA_000210315.1	GCA_000210315.1_00436	sec1	staphylococcal enterotoxin type C1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	266	266	100.00	98.12	266	CAA29260.1	staphylococcal enterotoxin type C1	NA	NA	CP001996.1	446711	447511
GCA_000210315.1	GCA_000210315.1_00437	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.17	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	CP001996.1	447678	448400
GCA_000210315.1	GCA_000210315.1_01810	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	80.65	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP001996.1	1858494	1859786
GCA_000210315.1	GCA_000210315.1_01852	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	96.67	240	ABD31003.1	serine protease SplB	NA	NA	CP001996.1	1893281	1894003
GCA_000210315.1	GCA_000210315.1_01869	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	178	311	57.23	99.44	178	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP001996.1	1909528	1910064
GCA_000210315.1	GCA_000210315.1_02290	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.92	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP001996.1	2271647	2273089
GCA_000210315.1	GCA_000210315.1_02459	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	97.84	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP001996.1	2419643	2420062
GCA_000210315.1	GCA_000210315.1_02547	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP001996.1	2511586	2512551
GCA_000210315.1	GCA_000210315.1_02548	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP001996.1	2513119	2514066
GCA_000210315.1	GCA_000210315.1_02549	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP001996.1	2514068	2515045
GCA_000210315.1	GCA_000210315.1_02763	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.61	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP001996.1	2745456	2746985
GCA_000210315.1	GCA_000210315.1_02802	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP001996.1	2795556	2796608
GCA_001810585.1	GCA_001810585.1_01111	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.13	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV801900.1	300734	301588
GCA_009498455.1	GCA_009498455.1_00754	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	73.91	92	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP045644.1	826107	826385
GCA_009498455.1	GCA_009498455.1_00756	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	558	561	100.00	72.37	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP045644.1	826847	828523
GCA_009498455.1	GCA_009498455.1_03868	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	50.00	92	BAA20336.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP045644.1	4177096	4177374
GCA_009498455.1	GCA_009498455.1_05530	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	295	295	99.66	75.17	294	WP_063842263.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP045644.1	5993362	5994249
GCA_009498455.1	GCA_009498455.1_06414	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	131	143	82.52	57.63	118	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP045644.1	6915044	6915439
GCA_014931415.1	GCA_014931415.1_01093	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP063121.1	1094943	1095803
GCA_000023205.1	GCA_000023205.1_00615	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP001628.1	672864	674288
GCA_009496835.1	GCA_009496835.1_01522	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIIZ01000005.1	109469	110668
GCA_001630765.1	GCA_001630765.1_01958	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LVFF01000038.1	81941	83341
GCA_001543285.1	GCA_001543285.1_00151	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	HMM	73	81	79.01	59.38	64	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	CP014164.1	142832	143053
GCA_001543285.1	GCA_001543285.1_00153	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	75.72	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP014164.1	143716	145356
GCA_001543285.1	GCA_001543285.1_00451	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP014164.1	449721	451835
GCA_029814875.1	GCA_029814875.1_02067	tmexC	multidrug efflux RND transporter periplasmic adaptor subunit TMexC	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	387	387	100.00	98.71	387	WP_034039546.1	multidrug efflux RND transporter periplasmic adaptor subunit TMexC3	NA	NA	CP104579.1	2071857	2073020
GCA_029814875.1	GCA_029814875.1_02068	tmexD2	multidrug efflux RND transporter permease subunit TMexD2	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	ALLELEP	1044	1044	100.00	100.00	1044	WP_027591160.1	multidrug efflux RND transporter permease subunit TMexD2	NA	NA	CP104579.1	2073036	2076170
GCA_029814875.1	GCA_029814875.1_02069	toprJ1	multidrug efflux transporter outer membrane subunit TOprJ1	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	ALLELEP	477	477	100.00	100.00	477	WP_003152694.1	multidrug efflux transporter outer membrane subunit TOprJ1	NA	NA	CP104579.1	2076175	2077608
GCA_029814875.1	GCA_029814875.1_02335	blaVIM-4	subclass B1 metallo-beta-lactamase VIM-4	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	266	266	100.00	100.00	266	WP_032492008.1	subclass B1 metallo-beta-lactamase VIM-4	NF012100.0	VIM family subclass B1 metallo-beta-lactamase	CP104579.1	2345996	2346796
GCA_029814875.1	GCA_029814875.1_02337	smr	multidrug efflux SMR transporter Smr	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	105	105	100.00	100.00	105	WP_032491400.1	multidrug efflux SMR transporter Smr	NF000280.1	multidrug efflux SMR transporter Smr	CP104579.1	2347496	2347813
GCA_029814875.1	GCA_029814875.1_02339	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP104579.1	2349699	2350538
GCA_029814875.1	GCA_029814875.1_02348	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	94.87	78	AAA88371.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP104579.1	2358670	2358906
GCA_029814875.1	GCA_029814875.1_02349	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	95.04	121	AAA88370.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP104579.1	2358903	2359268
GCA_029814875.1	GCA_029814875.1_02350	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	91.27	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP104579.1	2359286	2360971
GCA_029814875.1	GCA_029814875.1_02351	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	96.70	91	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP104579.1	2361043	2361318
GCA_029814875.1	GCA_029814875.1_02352	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP104579.1	2361334	2361684
GCA_029814875.1	GCA_029814875.1_02353	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	97.92	144	AAA98221.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP104579.1	2361756	2362190
GCA_029814875.1	GCA_029814875.1_02410	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	412	414	100.00	75.85	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	CP104579.1	2417984	2419222
GCA_029814875.1	GCA_029814875.1_02767	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	92.12	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	CP104579.1	2779169	2779780
GCA_029814875.1	GCA_029814875.1_02768	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	95.25	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	CP104579.1	2779877	2780764
GCA_029814875.1	GCA_029814875.1_02769	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	93.09	304	APX31172.1	heat resistance protein YfdX1	NA	NA	CP104579.1	2780867	2781781
GCA_029814875.1	GCA_029814875.1_02770	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	97.37	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	CP104579.1	2781804	2782262
GCA_029814875.1	GCA_029814875.1_02773	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.26	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP104579.1	2785642	2788491
GCA_000178435.1	GCA_000178435.1_00053	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	75.72	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	ADNT01000134.1	956	2596
GCA_000178435.1	GCA_000178435.1_00055	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	HMM	73	81	79.01	59.38	64	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	ADNT01000134.1	3259	3480
GCA_000178435.1	GCA_000178435.1_00534	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.73	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	ADNT01000092.1	42806	44920
GCA_003963205.1	GCA_003963205.1_01343	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	277	272	99.26	59.35	278	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	RXJE01000059.1	21215	22048
GCA_003963205.1	GCA_003963205.1_03442	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	477	562	84.52	45.64	482	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	RXJE01000034.1	84647	86080
GCA_018372995.1	GCA_018372995.1_01762	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.47	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JAHAHX010000017.1	3839	5233
GCA_002096115.1	GCA_002096115.1_00115	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP020762.1	126641	127933
GCA_002096115.1	GCA_002096115.1_00262	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP020762.1	275005	275850
GCA_002096115.1	GCA_002096115.1_00263	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP020762.1	275957	277714
GCA_002096115.1	GCA_002096115.1_00264	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP020762.1	277704	278084
GCA_002096115.1	GCA_002096115.1_01989	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP020762.1	2013979	2014398
GCA_002096115.1	GCA_002096115.1_02498	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP020762.1	2530198	2531271
GCA_900455935.1	GCA_900455935.1_01897	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	305	97.38	54.13	303	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	UGVN01000001.1	1225191	1226111
GCA_001908895.1	GCA_001908895.1_00030	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.24	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP018692.1	29453	30637
GCA_001908895.1	GCA_001908895.1_00908	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	140	141	98.58	78.42	139	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP018692.1	890205	890627
GCA_001908895.1	GCA_001908895.1_01245	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	EXACTP	1050	1050	100.00	100.00	1050	WP_000347934.1	multidrug efflux RND transporter permease subunit OqxB	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP018692.1	1228362	1231514
GCA_001908895.1	GCA_001908895.1_01246	oqxA	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	EXACTP	391	391	100.00	100.00	391	WP_002914189.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NF000272.1	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	CP018692.1	1231538	1232713
GCA_001908895.1	GCA_001908895.1_01796	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	570	600	95.00	99.82	570	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP018692.1	1859904	1861616
GCA_001908895.1	GCA_001908895.1_01797	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.83	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP018692.1	1861603	1863405
GCA_001908895.1	GCA_001908895.1_02260	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	135	102	100.00	61.32	106	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP018692.1	2322492	2322899
GCA_001908895.1	GCA_001908895.1_02694	blaSHV-11	broad-spectrum class A beta-lactamase SHV-11	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_004176269.1	broad-spectrum class A beta-lactamase SHV-11	NF000285.3	SHV family class A beta-lactamase	CP018692.1	2749671	2750531
GCA_001908895.1	GCA_001908895.1_03421	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	100.00	99.76	410	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP018692.1	3490818	3492050
GCA_001908895.1	GCA_001908895.1_04526	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	98.56	139	WP_004146118.1	FosA5 family fosfomycin resistance glutathione transferase	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP018692.1	4616758	4617177
GCA_001908895.1	GCA_001908895.1_05074	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP018692.1	5180386	5181288
GCA_001908895.1	GCA_001908895.1_05233	aac(6)-Ib-cr	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr	core	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	BLASTP	199	184	100.00	100.00	184	WP_063840321.1	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr5	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP018693.1	51331	51930
GCA_001908895.1	GCA_001908895.1_05234	blaOXA-1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	276	276	100.00	100.00	276	WP_001334766.1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NF000388.2	OXA-1 family class D beta-lactamase	CP018693.1	52061	52891
GCA_001908895.1	GCA_001908895.1_05235	catB3	type B-3 chloramphenicol O-acetyltransferase CatB3	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	PARTIALP	182	210	70.00	100.00	147	WP_000186237.1	type B-3 chloramphenicol O-acetyltransferase CatB3	NA	NA	CP018693.1	53029	53577
GCA_001908895.1	GCA_001908895.1_05237	aac(3)-IIe	aminoglycoside N-acetyltransferase AAC(3)-IIe	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	EXACTP	286	286	100.00	100.00	286	WP_000557452.1	aminoglycoside N-acetyltransferase AAC(3)-IIe	NF033080.0	AAC(3)-II family aminoglycoside N-acetyltransferase	CP018693.1	54334	55194
GCA_001908895.1	GCA_001908895.1_05244	blaCTX-M-15	extended-spectrum class A beta-lactamase CTX-M-15	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_000239590.1	extended-spectrum class A beta-lactamase CTX-M-15	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	CP018693.1	60348	61223
GCA_001908895.1	GCA_001908895.1_05263	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP018693.1	76606	77421
GCA_001908895.1	GCA_001908895.1_05278	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	EXACTP	189	189	100.00	100.00	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	CP018693.1	90040	90609
GCA_001908895.1	GCA_001908895.1_05279	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	931	949	97.89	99.25	929	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	CP018693.1	90724	93519
GCA_001908895.1	GCA_001908895.1_05296	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	116	116	100.00	100.00	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP018693.1	102965	103315
GCA_001908895.1	GCA_001908895.1_05297	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	91.67	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP018693.1	103365	103727
GCA_001908895.1	GCA_001908895.1_05298	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	583	583	100.00	100.00	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	CP018693.1	103745	105496
GCA_001908895.1	GCA_001908895.1_05299	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	429	429	100.00	100.00	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	CP018693.1	105544	106833
GCA_001908895.1	GCA_001908895.1_05300	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	141	141	100.00	100.00	141	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP018693.1	106846	107271
GCA_001908895.1	GCA_001908895.1_05311	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	94.44	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	CP018693.1	115307	115741
GCA_001908895.1	GCA_001908895.1_05312	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.14	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP018693.1	115958	117358
GCA_001908895.1	GCA_001908895.1_05313	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP018693.1	117355	118035
GCA_001908895.1	GCA_001908895.1_05314	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	BLASTP	309	309	100.00	99.68	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP018693.1	118090	119019
GCA_001908895.1	GCA_001908895.1_05315	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP018693.1	119024	119404
GCA_001908895.1	GCA_001908895.1_05316	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	100.00	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP018693.1	119444	120340
GCA_001908895.1	GCA_001908895.1_05317	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	EXACTP	605	605	100.00	100.00	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP018693.1	120340	122157
GCA_001908895.1	GCA_001908895.1_05322	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	815	824	98.79	94.49	816	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP018693.1	125338	127785
GCA_001908895.1	GCA_001908895.1_05324	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.85	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP018693.1	128439	131585
GCA_001908895.1	GCA_001908895.1_05325	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	97.67	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP018693.1	131596	132888
GCA_001908895.1	GCA_001908895.1_05326	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP018693.1	133002	133355
GCA_001908895.1	GCA_001908895.1_05327	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	461	461	100.00	100.00	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP018693.1	133384	134769
GCA_001908895.1	GCA_001908895.1_05328	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	226	226	100.00	100.00	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP018693.1	134959	135639
GCA_001908895.1	GCA_001908895.1_05329	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	EXACTP	491	491	100.00	100.00	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP018693.1	135632	137107
GCA_001908895.1	GCA_001908895.1_05330	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	91.61	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP018693.1	137358	137789
GCA_001908895.1	GCA_001908895.1_05380	blaOXA-48	OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	265	265	100.00	100.00	265	WP_015059991.1	OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48	NF000387.2	OXA-48 family class D beta-lactamase	CP018694.1	1319	2116
GCA_001814235.1	GCA_001814235.1_00070	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV815503.1	68797	69651
GCA_029850925.1	GCA_029850925.1_01535	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAOVAQ010000005.1	66835	68475
GCA_008728735.1	GCA_008728735.1_00199	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP041724.1	210393	211466
GCA_008728735.1	GCA_008728735.1_00341	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP041724.1	362534	363826
GCA_008728735.1	GCA_008728735.1_02203	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP041724.1	2241424	2241843
GCA_001811805.1	GCA_001811805.1_00007	tet(33)	tetracycline efflux MFS transporter Tet(33)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	419	407	100.00	99.02	407	WP_010991840.1	tetracycline efflux MFS transporter Tet(33)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	KV806690.1	3237	4496
GCA_001811805.1	GCA_001811805.1_00644	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	KV806694.1	128	943
GCA_001811805.1	GCA_001811805.1_01965	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	KV806703.1	422	1225
GCA_001811805.1	GCA_001811805.1_01966	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	KV806703.1	1225	2061
GCA_001811805.1	GCA_001811805.1_01968	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	KV806703.1	2265	3440
GCA_905373265.1	GCA_905373265.1_02594	blaCSP-1	extended-spectrum class A beta-lactamase CSP-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	305	305	100.00	100.00	305	WP_063859920.1	extended-spectrum class A beta-lactamase CSP-1	NF012099.1	class A beta-lactamase, subclass A2	CAJPRX010000068.1	1464	2381
GCA_905373265.1	GCA_905373265.1_02651	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CAJPRX010000076.1	1109	2326
GCA_905373265.1	GCA_905373265.1_02652	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAJPRX010000076.1	2446	3909
GCA_001063545.1	GCA_001063545.1_01114	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVEI01000026.1	217624	219264
GCA_001063545.1	GCA_001063545.1_01440	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	639	100.00	97.97	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JVEI01000031.1	7984	9906
GCA_001063545.1	GCA_001063545.1_01443	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.24	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JVEI01000031.1	11922	12776
GCA_901472485.1	GCA_901472485.1_01180	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.41	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LR590465.1	1188508	1189902
GCA_001815045.1	GCA_001815045.1_00972	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	94.45	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	KV818852.1	55722	57458
GCA_001815045.1	GCA_001815045.1_00973	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	96.52	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	KV818852.1	57460	59184
GCA_001815045.1	GCA_001815045.1_01552	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	KV818853.1	229560	229988
GCA_001815045.1	GCA_001815045.1_01567	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV818853.1	241088	242551
GCA_001815045.1	GCA_001815045.1_01568	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV818853.1	242671	243888
GCA_019929235.1	GCA_019929235.1_00311	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHZPD010000010.1	69519	71159
GCA_019929235.1	GCA_019929235.1_01696	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAHZPD010000004.1	145150	147069
GCA_019929235.1	GCA_019929235.1_01752	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.56	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAHZPD010000005.1	39881	41605
GCA_019929235.1	GCA_019929235.1_01753	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAHZPD010000005.1	41607	43343
GCA_030229035.1	GCA_030229035.1_00274	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPGB010000018.1	247	1101
GCA_001813425.1	GCA_001813425.1_01175	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV812492.1	70272	71126
GCA_003264135.1	GCA_003264135.1_01734	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	44.80	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NAQW01000054.1	440640	441014
GCA_017655745.1	GCA_017655745.1_00138	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	73.78	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP040416.1	126120	127763
GCA_017655745.1	GCA_017655745.1_00557	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	121	100.00	45.60	125	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040416.1	528512	528886
GCA_024792655.1	GCA_024792655.1_00123	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JANUUE010000001.1	147182	149107
GCA_024792655.1	GCA_024792655.1_03427	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JANUUE010000001.1	3951355	3952314
GCA_024792655.1	GCA_024792655.1_04532	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	43.69	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANUUE010000001.1	5121430	5121756
GCA_012851115.1	GCA_012851115.1_00150	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP051643.1	133464	134753
GCA_012851115.1	GCA_012851115.1_01929	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	267	350	74.29	80.00	260	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP051643.1	1923099	1923902
GCA_012851115.1	GCA_012851115.1_02597	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP051645.1	4716	6008
GCA_012851115.1	GCA_012851115.1_02601	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP051645.1	9691	10038
GCA_012851115.1	GCA_012851115.1_02627	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP051645.1	28198	29043
GCA_012851115.1	GCA_012851115.1_02628	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP051645.1	29150	30907
GCA_012851115.1	GCA_012851115.1_02629	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP051645.1	30897	31277
GCA_012851115.1	GCA_012851115.1_02663	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP051648.1	21893	22291
GCA_012851115.1	GCA_012851115.1_02664	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP051648.1	22514	23257
GCA_012851115.1	GCA_012851115.1_02687	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP051648.1	39626	41092
GCA_002966575.1	GCA_002966575.1_00138	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP020006.1	128992	129852
GCA_002966575.1	GCA_002966575.1_01373	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP020006.1	1369585	1370979
GCA_022069005.1	GCA_022069005.1_00887	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP035241.1	848553	849752
GCA_001811085.1	GCA_001811085.1_00030	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KZ672763.1	24364	25827
GCA_001811085.1	GCA_001811085.1_00031	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KZ672763.1	25947	27164
GCA_001811085.1	GCA_001811085.1_00208	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KZ672766.1	53026	54945
GCA_028325965.1	GCA_028325965.1_00107	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMJX010000011.1	9683	11602
GCA_028325965.1	GCA_028325965.1_00675	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQMJX010000001.1	141262	142725
GCA_028325965.1	GCA_028325965.1_00676	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQMJX010000001.1	142845	144062
GCA_028325965.1	GCA_028325965.1_00960	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.36	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JAQMJX010000002.1	53499	55235
GCA_028325965.1	GCA_028325965.1_00961	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JAQMJX010000002.1	55237	56961
GCA_016126035.1	GCA_016126035.1_00278	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAEFDC010000001.1	285215	287140
GCA_016126035.1	GCA_016126035.1_01486	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAEFDC010000002.1	320190	320990
GCA_000177315.1	GCA_000177315.1_00372	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	ADFO01000105.1	31020	31985
GCA_000177315.1	GCA_000177315.1_01124	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	ADFO01000073.1	10747	12672
GCA_024496285.1	GCA_024496285.1_02340	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	302	97.02	52.20	295	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP101743.1	2538777	2539682
GCA_024496285.1	GCA_024496285.1_02928	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	266	275	86.55	65.13	238	WP_117407753.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP101743.1	3198627	3199427
GCA_024496285.1	GCA_024496285.1_05512	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	91	144	63.19	98.90	91	CAA77320.1	mercury resistance transcriptional regulator MerR	NA	NA	CP101744.1	171161	171436
GCA_024496285.1	GCA_024496285.1_05570	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	91	144	63.19	98.90	91	CAA77320.1	mercury resistance transcriptional regulator MerR	NA	NA	CP101744.1	242212	242487
GCA_024496285.1	GCA_024496285.1_05602	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	120	99.17	60.50	119	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP101745.1	12796	13155
GCA_947041195.1	GCA_947041195.1_01605	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAMRDC010000031.1	6822	8285
GCA_947041195.1	GCA_947041195.1_01607	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	250	405	60.00	100.00	243	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NA	NA	CAMRDC010000031.1	8871	9623
GCA_947041195.1	GCA_947041195.1_01618	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CAMRDC010000031.1	20446	21909
GCA_947041195.1	GCA_947041195.1_01620	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	PARTIALP	250	405	60.00	100.00	243	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NA	NA	CAMRDC010000031.1	22495	23247
GCA_014169775.1	GCA_014169775.1_00032	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	99.75	394	BAE77620.1	multidrug efflux MFS transporter EmrD	NA	NA	AP022261.1	29229	30413
GCA_014169775.1	GCA_014169775.1_00050	air	inverse autotransporter adhesin EaeX/Air	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	3418	3418	100.00	92.57	3418	CAR15326.1	inverse autotransporter adhesin EaeX/Air	NA	NA	AP022261.1	48290	58546
GCA_014169775.1	GCA_014169775.1_00051	eilA	HilA family transcriptional regulator EilA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	565	565	100.00	100.00	565	CBG36837.1	HilA family transcriptional regulator EilA	NA	NA	AP022261.1	58598	60295
GCA_014169775.1	GCA_014169775.1_00242	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	93.62	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	AP022261.1	263628	264053
GCA_014169775.1	GCA_014169775.1_00245	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	90.00	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP022261.1	267167	267529
GCA_014169775.1	GCA_014169775.1_00477	acrF	multidrug efflux RND transporter permease subunit AcrF	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1034	1034	100.00	99.42	1034	AAC76298.1	multidrug efflux RND transporter permease subunit AcrF	NA	NA	AP022261.1	484146	487250
GCA_014169775.1	GCA_014169775.1_00776	sslE	lipoprotein metalloprotease SslE	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	1515	1520	100.00	88.16	1520	ADE89421.1	lipoprotein metalloprotease SslE	NF037973.1	lipoprotein metalloprotease SslE	AP022261.1	784209	788756
GCA_014169775.1	GCA_014169775.1_01317	sinH	intimin-like inverse autotransporter SinH	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	725	730	100.00	72.50	731	AAL21411.1	intimin-like inverse autotransporter SinH	NF033423.1	intimin-like inverse autotransporter SinH	AP022261.1	1338658	1340835
GCA_014169775.1	GCA_014169775.1_02357	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	BLASTP	102	102	100.00	97.06	102	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	AP022261.1	2370654	2370962
GCA_014169775.1	GCA_014169775.1_02737	ariR	biofilm/acid-resistance regulator AriR	plus	STRESS	ACID	NA	NA	BLASTP	88	88	100.00	98.86	88	AAC74250.1	biofilm/acid-resistance regulator AriR	NA	NA	AP022261.1	2773517	2773783
GCA_014169775.1	GCA_014169775.1_03658	fdeC	inverse autotransporter adhesin FdeC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1417	1416	99.93	92.37	1415	ABE05822.1	inverse autotransporter adhesin FdeC	NA	NA	AP022261.1	3709774	3714027
GCA_014169775.1	GCA_014169775.1_03957	espX1	type III secretion system effector EspX1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	473	473	100.00	92.60	473	ADD54679.1	type III secretion system effector EspX1	NA	NA	AP022261.1	4020998	4022419
GCA_014169775.1	GCA_014169775.1_04057	mdtM	multidrug efflux MFS transporter MdtM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	100.00	98.05	410	AAC77293.1	multidrug efflux MFS transporter MdtM	NA	NA	AP022261.1	4117802	4119034
GCA_014169775.1	GCA_014169775.1_04146	capU	putative hexosyltransferase CapU	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	362	362	100.00	99.45	362	CAV02025.1	putative hexosyltransferase CapU	NA	NA	AP022261.1	4201368	4202456
GCA_014169775.1	GCA_014169775.1_04275	blaEC	BlaEC family class C beta-lactamase	plus	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	377	377	100.00	98.41	377	WP_063610930.1	extended-spectrum class C beta-lactamase EC-15	NF000185.2	BlaEC family class C beta-lactamase	AP022261.1	4322027	4323160
GCA_014169775.1	GCA_014169775.1_04620	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	EXACTP	300	300	100.00	100.00	300	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	AP022261.1	4650674	4651576
GCA_014169775.1	GCA_014169775.1_04756	lpfA-O113	long polar fimbria major subunit LpfA-O113	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	190	190	100.00	100.00	190	ACB16424.1	long polar fimbria major subunit LpfA-O113	NA	NA	AP022261.1	4785832	4786404
GCA_014169775.1	GCA_014169775.1_05020	aap	dispersin Aap	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	95.69	116	CBG27807.1	dispersin Aap	NA	NA	AP022262.1	110383	110733
GCA_014169775.1	GCA_014169775.1_05049	qnrS1	quinolone resistance pentapeptide repeat protein QnrS1	core	AMR	AMR	QUINOLONE	QUINOLONE	ALLELEP	218	218	100.00	100.00	218	WP_001516695.1	quinolone resistance pentapeptide repeat protein QnrS1	NF000056.3	QnrS family quinolone resistance pentapeptide repeat protein	AP022263.1	10501	11157
GCA_014169775.1	GCA_014169775.1_05055	blaCTX-M-15	extended-spectrum class A beta-lactamase CTX-M-15	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_000239590.1	extended-spectrum class A beta-lactamase CTX-M-15	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	AP022263.1	15798	16673
GCA_900445495.1	GCA_900445495.1_03369	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	UFTK01000001.1	3617735	3619660
GCA_031191225.1	GCA_031191225.1_00464	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP133471.1	439254	440453
GCA_031191225.1	GCA_031191225.1_01186	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP133471.1	1219830	1221488
GCA_001588855.1	GCA_001588855.1_00849	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	LAWD01000033.1	17069	17497
GCA_001239225.1	GCA_001239225.1_01614	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	97.71	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CUEO01000003.1	240410	240805
GCA_001239225.1	GCA_001239225.1_01615	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	97.67	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUEO01000003.1	240823	242112
GCA_001239225.1	GCA_001239225.1_01616	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA27587.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CUEO01000003.1	242112	242426
GCA_001239225.1	GCA_001239225.1_01838	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.25	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUEO01000004.1	143432	144724
GCA_001239225.1	GCA_001239225.1_02480	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CUEO01000010.1	8499	8900
GCA_001239225.1	GCA_001239225.1_02481	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUEO01000010.1	8918	10207
GCA_001239225.1	GCA_001239225.1_02482	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	98.08	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CUEO01000010.1	10207	10521
GCA_000724065.1	GCA_000724065.1_01717	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	294	98.98	65.76	295	WP_063842628.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	LK021338.1	38055	38966
GCA_000724065.1	GCA_000724065.1_03647	tet(V)	tetracycline efflux MFS transporter Tet(V)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	416	419	98.09	67.40	411	WP_003896589.1	tetracycline efflux MFS transporter Tet(V)	NF012178.0	tetracycline efflux MFS transporter Tet(V)	LK021339.1	649341	650591
GCA_000724065.1	GCA_000724065.1_04632	cml	Cmx/CmrA family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	384	392	95.66	61.42	381	WP_003971483.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	NF033135.1	Cmx/CmrA family chloramphenicol efflux MFS transporter	LK021341.1	255722	256876
GCA_004614315.1	GCA_004614315.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	665	668	99.10	100.00	662	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP020960.1	39108	41105
GCA_004614315.1	GCA_004614315.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	322	585	54.53	100.00	319	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP020960.1	41222	42190
GCA_004614315.1	GCA_004614315.1_00136	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP020960.1	151573	152931
GCA_004614315.1	GCA_004614315.1_00342	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP020960.1	381237	382592
GCA_004614315.1	GCA_004614315.1_00380	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP020960.1	415821	416432
GCA_004614315.1	GCA_004614315.1_00865	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.11	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP020960.1	896139	896867
GCA_004614315.1	GCA_004614315.1_00866	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	242	100.00	97.52	242	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP020960.1	896891	897619
GCA_004614315.1	GCA_004614315.1_00946	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP020960.1	953379	953870
GCA_004614315.1	GCA_004614315.1_00951	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP020960.1	956083	956433
GCA_004614315.1	GCA_004614315.1_01687	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP020960.1	1705015	1705992
GCA_004614315.1	GCA_004614315.1_01688	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	312	312	100.00	99.68	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP020960.1	1705994	1706932
GCA_004614315.1	GCA_004614315.1_01864	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP020960.1	1853653	1854405
GCA_004614315.1	GCA_004614315.1_02038	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP020960.1	2046734	2048026
GCA_004614315.1	GCA_004614315.1_02082	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP020960.1	2085265	2085981
GCA_004614315.1	GCA_004614315.1_02085	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP020960.1	2087756	2088478
GCA_004614315.1	GCA_004614315.1_02086	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP020960.1	2088603	2089310
GCA_004614315.1	GCA_004614315.1_02096	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP020960.1	2100959	2101942
GCA_004614315.1	GCA_004614315.1_02097	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP020960.1	2101944	2102879
GCA_004614315.1	GCA_004614315.1_02275	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP020960.1	2229271	2229405
GCA_004614315.1	GCA_004614315.1_02423	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.58	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP020960.1	2381453	2382895
GCA_004614315.1	GCA_004614315.1_02599	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP020960.1	2534641	2535060
GCA_004614315.1	GCA_004614315.1_02687	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP020960.1	2624298	2625263
GCA_004614315.1	GCA_004614315.1_02688	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP020960.1	2625830	2626777
GCA_004614315.1	GCA_004614315.1_02689	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP020960.1	2626779	2627756
GCA_004614315.1	GCA_004614315.1_02912	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP020960.1	2866318	2867847
GCA_004614315.1	GCA_004614315.1_02946	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP020960.1	2911180	2912232
GCA_003397585.1	GCA_003397585.1_00493	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.43	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	QJUV01000001.1	572903	574381
GCA_003626115.1	GCA_003626115.1_00897	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZGX01000003.1	103005	103946
GCA_004793845.1	GCA_004793845.1_02546	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	SRYP01000007.1	72796	73218
GCA_002252535.1	GCA_002252535.1_01432	cml	Cml family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	397	397	100.00	92.70	397	WP_061345584.1	Cml family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	NNRN01000039.1	7425	8618
GCA_002252535.1	GCA_002252535.1_01448	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	266	266	100.00	73.68	266	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	NNRN01000039.1	24233	25033
GCA_002252535.1	GCA_002252535.1_02201	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	767	562	82.03	48.28	466	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NNRN01000045.1	6528	8831
GCA_002252535.1	GCA_002252535.1_02856	bepE	multidrug efflux RND transporter permease subunit BepE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1049	1051	99.71	94.37	1048	AAN29241.1	multidrug efflux RND transporter permease subunit BepE	NA	NA	NNRN01000048.1	43502	46651
GCA_002252535.1	GCA_002252535.1_03198	blaOCH-1	extended-spectrum class C beta-lactamase OCH-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	390	390	100.00	100.00	390	WP_040129485.1	extended-spectrum class C beta-lactamase OCH-1	NF000264.2	OCH family extended-spectrum class C beta-lactamase	NNRN01000051.1	59460	60632
GCA_004291125.1	GCA_004291125.1_00460	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	356	350	100.00	74.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	QHKH01000001.1	370086	371156
GCA_000242295.1	GCA_000242295.1_01731	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JH591083.1	85137	86531
GCA_020341455.1	GCA_020341455.1_03260	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP084360.1	4556	4792
GCA_020341455.1	GCA_020341455.1_03261	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP084360.1	4789	5154
GCA_020341455.1	GCA_020341455.1_03262	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP084360.1	5172	6857
GCA_020341455.1	GCA_020341455.1_03263	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP084360.1	6929	7204
GCA_020341455.1	GCA_020341455.1_03264	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP084360.1	7217	7567
GCA_020341455.1	GCA_020341455.1_03265	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP084360.1	7639	8073
GCA_020341455.1	GCA_020341455.1_03275	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP084360.1	18714	19148
GCA_020341455.1	GCA_020341455.1_03276	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP084360.1	19220	19570
GCA_020341455.1	GCA_020341455.1_03277	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP084360.1	19583	19858
GCA_020341455.1	GCA_020341455.1_03278	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP084360.1	19930	21615
GCA_020341455.1	GCA_020341455.1_03279	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP084360.1	21633	21998
GCA_020341455.1	GCA_020341455.1_03280	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP084360.1	21995	22231
GCA_020341455.1	GCA_020341455.1_03991	blaOXA	OXA-22 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	275	274	99.64	96.70	273	WP_063861776.1	benzylpenicillin-hydrolyzing class D beta-lactamase OXA-22	NF033509.1	OXA-22 family class D beta-lactamase	CP084360.1	807566	808393
GCA_020341455.1	GCA_020341455.1_04148	blaOXA	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	271	271	100.00	98.15	271	WP_063864500.1	carbapenem-hydrolyzing class D beta-lactamase OXA-60	NF000395.3	OXA-60 family carbapenem-hydrolyzing class D beta-lactamase	CP084360.1	980424	981239
GCA_020341455.1	GCA_020341455.1_04612	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP084361.1	82237	82671
GCA_020341455.1	GCA_020341455.1_04613	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP084361.1	82743	83093
GCA_020341455.1	GCA_020341455.1_04614	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP084361.1	83106	83381
GCA_020341455.1	GCA_020341455.1_04615	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP084361.1	83453	85138
GCA_020341455.1	GCA_020341455.1_04616	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP084361.1	85156	85521
GCA_020341455.1	GCA_020341455.1_04617	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP084361.1	85518	85754
GCA_000214395.1	GCA_000214395.1_02291	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	302	99.34	54.61	304	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP002735.1	2556197	2557108
GCA_000214395.1	GCA_000214395.1_02326	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	257	268	91.79	72.36	246	WP_114268491.1	class D beta-lactamase	NF000270.1	class D beta-lactamase	CP002735.1	2601174	2601947
GCA_000214395.1	GCA_000214395.1_04397	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	275	94.91	59.77	261	WP_125064048.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP002735.1	4881846	4882628
GCA_019456735.1	GCA_019456735.1_01690	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.67	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JACVSV010000062.1	64	1197
GCA_000193415.2	GCA_000193415.2_01131	tetB(58)	tetracycline efflux ABC transporter Tet(58) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	271	271	100.00	91.88	271	WP_071223302.1	tetracycline efflux ABC transporter Tet(58) subunit B	NA	NA	ADHJ01000043.1	21516	22331
GCA_000193415.2	GCA_000193415.2_01621	taeA	ABC-F type ribosomal protection protein TaeA	core	AMR	AMR	PLEUROMUTILIN	TIAMULIN	BLASTP	651	648	100.00	91.86	651	WP_071223118.1	ABC-F type ribosomal protection protein TaeA	NA	NA	ADHJ01000039.1	162828	164783
GCA_000193415.2	GCA_000193415.2_02472	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	217	99.54	67.59	216	WP_071218680.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	ADHJ01000036.1	55847	56497
GCA_000193415.2	GCA_000193415.2_02815	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	211	212	99.53	77.25	211	WP_047211550.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	ADHJ01000025.1	163332	163967
GCA_000193415.2	GCA_000193415.2_02895	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	268	99.25	46.47	269	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	ADHJ01000025.1	236435	237244
GCA_000193415.2	GCA_000193415.2_03000	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	498	494	99.60	62.20	492	WP_002294513.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	ADHJ01000025.1	342097	343593
GCA_000193415.2	GCA_000193415.2_03333	aac(2)-IIb	kasugamycin N-acetyltransferase AAC(2)-IIb	core	AMR	AMR	AMINOGLYCOSIDE	KASUGAMYCIN	HMM	239	240	99.58	66.11	239	WP_071224044.1	kasugamycin N-acetyltransferase AAC(2)-IIb	NF033472.1	kasugamycin N-acetyltransferase AAC(2)-IIb	ADHJ01000023.1	187144	187863
GCA_000193415.2	GCA_000193415.2_04615	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	287	287	97.56	44.29	280	WP_025811090.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	ADHJ01000014.1	205897	206760
GCA_000193415.2	GCA_000193415.2_06150	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	312	304	92.11	66.55	287	WP_087344360.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	ADHJ01000001.1	221291	222229
GCA_002003685.1	GCA_002003685.1_00995	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	95.03	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	MPZO01000004.1	78825	80999
GCA_002003685.1	GCA_002003685.1_00998	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	90.79	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	MPZO01000004.1	83415	87074
GCA_002003685.1	GCA_002003685.1_00999	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.99	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	MPZO01000004.1	87216	88331
GCA_002003685.1	GCA_002003685.1_02341	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	101	102	100.00	76.19	105	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	MPZO01000012.1	115519	115824
GCA_002003685.1	GCA_002003685.1_02358	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	225	217	94.01	65.85	205	WP_063843208.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	MPZO01000012.1	132843	133520
GCA_002003685.1	GCA_002003685.1_02564	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	294	300	97.33	91.10	292	BAE77395.1	CDF family cation-efflux transporter FieF	NA	NA	MPZO01000014.1	68890	69774
GCA_002003685.1	GCA_002003685.1_02698	blaACT-17	cephalosporin-hydrolyzing class C beta-lactamase ACT-17	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	381	381	100.00	100.00	381	WP_017694683.1	cephalosporin-hydrolyzing class C beta-lactamase ACT-17	NF000385.4	ACT family cephalosporin-hydrolyzing class C beta-lactamase	MPZO01000015.1	89687	90832
GCA_002003685.1	GCA_002003685.1_04041	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	97.16	141	WP_038415208.1	fosfomycin resistance glutathione transferase FosA	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	MPZO01000037.1	22655	23080
GCA_000159135.1	GCA_000159135.1_00237	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GG667531.1	209228	210670
GCA_905372815.1	GCA_905372815.1_01751	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAJPQL010000065.1	12269	14188
GCA_905372815.1	GCA_905372815.1_02030	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	PARTIALP	241	321	75.08	100.00	241	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF012099.1	class A beta-lactamase, subclass A2	CAJPQL010000093.1	199	924
GCA_018492835.1	GCA_018492835.1_00144	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.21	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAGHEF010000001.1	163819	164700
GCA_018492835.1	GCA_018492835.1_00318	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	99.59	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	JAGHEF010000002.1	36059	36793
GCA_018492835.1	GCA_018492835.1_00544	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAGHEF010000002.1	305538	307463
GCA_018492835.1	GCA_018492835.1_01467	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	91.87	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	JAGHEF010000002.1	1402425	1403756
GCA_018492835.1	GCA_018492835.1_03135	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	110	107	99.07	42.45	106	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAGHEF010000003.1	813703	814035
GCA_029927425.1	GCA_029927425.1_00030	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREDB010000010.1	28505	29350
GCA_029927425.1	GCA_029927425.1_00031	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREDB010000010.1	29519	31276
GCA_029927425.1	GCA_029927425.1_00032	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREDB010000010.1	31266	31646
GCA_029927425.1	GCA_029927425.1_01810	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREDB010000004.1	178497	178898
GCA_029927425.1	GCA_029927425.1_01811	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDB010000004.1	178916	180205
GCA_029927425.1	GCA_029927425.1_01923	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREDB010000004.1	322093	323166
GCA_029927425.1	GCA_029927425.1_02363	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDB010000007.1	60515	61804
GCA_016695445.1	GCA_016695445.1_00044	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP065356.1	43894	44295
GCA_016695445.1	GCA_016695445.1_00045	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP065356.1	44313	45602
GCA_016695445.1	GCA_016695445.1_00048	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP065356.1	46899	48905
GCA_016695445.1	GCA_016695445.1_00065	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP065356.1	63229	63621
GCA_016695445.1	GCA_016695445.1_00066	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP065356.1	63639	64931
GCA_016695445.1	GCA_016695445.1_00150	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP065356.1	139870	141162
GCA_016695445.1	GCA_016695445.1_01642	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP065356.1	1585776	1586273
GCA_016695445.1	GCA_016695445.1_01696	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP065356.1	1631029	1632468
GCA_016695445.1	GCA_016695445.1_02537	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP065356.1	2443736	2444581
GCA_016695445.1	GCA_016695445.1_02538	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP065356.1	2444688	2446445
GCA_016695445.1	GCA_016695445.1_02539	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP065356.1	2446435	2446815
GCA_016695445.1	GCA_016695445.1_02547	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP065356.1	2454369	2455163
GCA_016695445.1	GCA_016695445.1_02548	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP065356.1	2455256	2455798
GCA_016695445.1	GCA_016695445.1_02553	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	CP065356.1	2459424	2459747
GCA_014264995.1	GCA_014264995.1_00115	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMXW010000013.1	2710	3270
GCA_014264995.1	GCA_014264995.1_00116	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMXW010000013.1	3454	4998
GCA_014264995.1	GCA_014264995.1_00196	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXW010000017.1	495	1787
GCA_014264995.1	GCA_014264995.1_00200	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMXW010000017.1	5470	5817
GCA_014264995.1	GCA_014264995.1_00211	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMXW010000018.1	5352	5723
GCA_014264995.1	GCA_014264995.1_00212	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMXW010000018.1	5723	7480
GCA_014264995.1	GCA_014264995.1_00213	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMXW010000018.1	7580	9586
GCA_014264995.1	GCA_014264995.1_00224	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMXW010000020.1	238	981
GCA_014264995.1	GCA_014264995.1_00225	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMXW010000020.1	1198	1602
GCA_014264995.1	GCA_014264995.1_00231	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMXW010000022.1	1475	2209
GCA_014264995.1	GCA_014264995.1_00900	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXW010000005.1	41988	43280
GCA_014264995.1	GCA_014264995.1_00958	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMXW010000006.1	10298	10678
GCA_014264995.1	GCA_014264995.1_00959	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMXW010000006.1	10668	12425
GCA_014264995.1	GCA_014264995.1_00960	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMXW010000006.1	12532	13377
GCA_014264995.1	GCA_014264995.1_01076	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMXW010000007.1	45457	47097
GCA_019391935.1	GCA_019391935.1_02412	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	100.00	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JAHXRH010000008.1	87807	88997
GCA_015679705.1	GCA_015679705.1_00455	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP030815.1	457646	459025
GCA_015679705.1	GCA_015679705.1_01213	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP030815.1	1213544	1214449
GCA_015679705.1	GCA_015679705.1_01341	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP030815.1	1349657	1350895
GCA_015679705.1	GCA_015679705.1_01343	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	215	210	74.29	98.72	156	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP030815.1	1352386	1353033
GCA_015679705.1	GCA_015679705.1_01345	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP030815.1	1353844	1355412
GCA_015679705.1	GCA_015679705.1_01549	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	379	508	72.83	99.46	370	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP030815.1	1558949	1560088
GCA_009496165.1	GCA_009496165.1_00411	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJQ01000001.1	263853	265052
GCA_938014195.1	GCA_938014195.1_00511	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	98.65	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CALLSE010000016.1	40384	41574
GCA_014596365.2	GCA_014596365.2_00730	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	99.71	346	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	MAYX02000001.1	745349	746389
GCA_014596365.2	GCA_014596365.2_02303	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	346	639	54.15	99.71	346	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	MAYX02000004.1	55	1095
GCA_024295855.1	GCA_024295855.1_00836	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOR010000002.1	191440	191868
GCA_024295855.1	GCA_024295855.1_00841	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOR010000002.1	193609	195072
GCA_024295855.1	GCA_024295855.1_00842	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOR010000002.1	195192	196409
GCA_024295855.1	GCA_024295855.1_01101	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCOR010000003.1	180663	182582
GCA_024295855.1	GCA_024295855.1_01373	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCOR010000004.1	224935	226830
GCA_024295855.1	GCA_024295855.1_01526	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCOR010000005.1	111454	113178
GCA_024295855.1	GCA_024295855.1_01527	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCOR010000005.1	113180	114916
GCA_902167825.1	GCA_902167825.1_01969	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.24	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CABHNJ010000037.1	18785	20263
GCA_000297795.2	GCA_000297795.2_01354	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	43.83	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	HF541867.1	270675	272099
GCA_000297795.2	GCA_000297795.2_01355	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	86.70	45.64	195	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	HF541867.1	272134	272787
GCA_003312465.1	GCA_003312465.1_00091	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_033493020.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP030777.1	99843	101762
GCA_003312465.1	GCA_003312465.1_02146	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	93.74	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP030777.1	2255486	2257405
GCA_003312465.1	GCA_003312465.1_02147	tet(40)	tetracycline efflux MFS transporter Tet(40)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	406	406	100.00	98.77	406	WP_015573055.1	tetracycline efflux MFS transporter Tet(40)	NF000049.1	tetracycline efflux MFS transporter Tet(40)	CP030777.1	2257554	2258774
GCA_018279805.1	GCA_018279805.1_00479	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	79.17	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP042282.1	598147	599028
GCA_018279805.1	GCA_018279805.1_00989	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.10	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP042282.1	1165896	1167227
GCA_018279805.1	GCA_018279805.1_04822	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP042282.1	5819460	5821385
GCA_022568935.1	GCA_022568935.1_01053	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.54	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKD010000003.1	143730	145022
GCA_022568935.1	GCA_022568935.1_01210	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKD010000003.1	313002	314075
GCA_022568935.1	GCA_022568935.1_01593	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKD010000004.1	257972	258391
GCA_018407965.1	GCA_018407965.1_00791	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.29	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAGSWW010000002.1	65776	66849
GCA_018407965.1	GCA_018407965.1_02566	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAGSWW010000012.1	61906	63195
GCA_018407965.1	GCA_018407965.1_02568	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAGSWW010000012.1	63500	63880
GCA_018407965.1	GCA_018407965.1_02569	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAGSWW010000012.1	63870	65627
GCA_018407965.1	GCA_018407965.1_02570	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAGSWW010000012.1	65734	66579
GCA_018407965.1	GCA_018407965.1_02587	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JAGSWW010000013.1	13462	14079
GCA_018407965.1	GCA_018407965.1_02697	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAGSWW010000016.1	243	566
GCA_001225905.1	GCA_001225905.1_00265	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	93.75	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CUHF01000002.1	1422	1814
GCA_001225905.1	GCA_001225905.1_00266	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CUHF01000002.1	1832	3124
GCA_001225905.1	GCA_001225905.1_02381	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CUHF01000030.1	13501	15045
GCA_001225905.1	GCA_001225905.1_02382	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CUHF01000030.1	15229	15789
GCA_001225905.1	GCA_001225905.1_02433	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CUHF01000038.1	611	1510
GCA_001225905.1	GCA_001225905.1_02434	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CUHF01000038.1	1609	3075
GCA_001225905.1	GCA_001225905.1_02440	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	99.07	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	CUHF01000042.1	1982	2305
GCA_902374375.1	GCA_902374375.1_00452	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CABKPU010000002.1	352649	354574
GCA_902374375.1	GCA_902374375.1_00918	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	297	300	95.33	49.31	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CABKPU010000003.1	207678	208571
GCA_014982385.1	GCA_014982385.1_01264	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JADCLU010000004.1	67012	67872
GCA_014982385.1	GCA_014982385.1_01267	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JADCLU010000004.1	69955	70791
GCA_014982385.1	GCA_014982385.1_01268	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JADCLU010000004.1	70791	71594
GCA_014982385.1	GCA_014982385.1_01269	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JADCLU010000004.1	71655	72470
GCA_014982385.1	GCA_014982385.1_01270	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	JADCLU010000004.1	72694	73554
GCA_018829705.1	GCA_018829705.1_01615	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	JAHKJZ010000004.1	51770	53164
GCA_000238055.2	GCA_000238055.2_00321	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KE148312.1	314690	316609
GCA_000238055.2	GCA_000238055.2_00326	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	92.07	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KE148312.1	319588	321066
GCA_000261285.1	GCA_000261285.1_01726	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AJTC01000037.1	53302	53724
GCA_016728745.1	GCA_016728745.1_00354	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP068169.1	407400	408821
GCA_016728745.1	GCA_016728745.1_00359	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	298	284	100.00	98.59	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP068169.1	412266	413162
GCA_016728745.1	GCA_016728745.1_00583	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	98.99	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	CP068169.1	646985	648766
GCA_016728745.1	GCA_016728745.1_00739	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.24	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP068169.1	812819	813673
GCA_016728745.1	GCA_016728745.1_01139	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP068169.1	1285940	1287115
GCA_016728745.1	GCA_016728745.1_01795	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	CP068169.1	1998777	1999952
GCA_016728745.1	GCA_016728745.1_01797	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP068169.1	2000156	2000992
GCA_016728745.1	GCA_016728745.1_01798	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CP068169.1	2000992	2001795
GCA_016728745.1	GCA_016728745.1_01801	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP068169.1	2003096	2003911
GCA_001558875.2	GCA_001558875.2_01926	vanS-C	vancomycin resistance histidine kinase VanS-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	354	376	94.15	94.92	354	WP_034869172.1	vancomycin resistance histidine kinase VanS-C	NF033091.0	vancomycin resistance histidine kinase VanS	CP014067.2	2043379	2044443
GCA_001558875.2	GCA_001558875.2_01927	vanR-C	vancomycin resistance response regulator transcription factor VanR-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	231	231	100.00	99.57	231	WP_034872470.1	vancomycin resistance response regulator transcription factor VanR-C	NF000403.1	vancomycin resistance response regulator transcription factor VanR-C	CP014067.2	2044499	2045194
GCA_001558875.2	GCA_001558875.2_01928	vanTc	membrane-bound serine racemase VanT	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	700	700	100.00	97.71	700	WP_063856759.1	membrane-bound serine racemase VanT	NF033132.1	membrane-bound serine racemase VanT	CP014067.2	2045293	2047395
GCA_001558875.2	GCA_001558875.2_01929	vanXY-C	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	190	190	100.00	99.47	190	WP_010749757.1	D-Ala-D-Ala dipeptidase/D-Ala-D-Ala carboxypeptidase VanXY-C	NF000380.1	D,D-carboxypeptidase/D,D-dipeptidase VanXY	CP014067.2	2047392	2047964
GCA_001558875.2	GCA_001558875.2_01930	vanC	D-alanine--D-serine ligase VanC2/3	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	BLASTP	350	350	100.00	99.14	350	WP_063856657.1	D-alanine--D-serine ligase VanC2/3	NF012214.1	D-alanine--D-serine ligase VanC	CP014067.2	2047961	2049013
GCA_900447475.1	GCA_900447475.1_00629	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UFXP01000001.1	594879	596321
GCA_028621975.1	GCA_028621975.1_01851	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP117525.1	1966516	1967253
GCA_028621975.1	GCA_028621975.1_01859	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	97.97	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP117525.1	1977171	1979090
GCA_021513075.1	GCA_021513075.1_01547	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP090985.1	1554883	1555263
GCA_021513075.1	GCA_021513075.1_01548	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP090985.1	1555253	1557010
GCA_021513075.1	GCA_021513075.1_01549	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP090985.1	1557117	1557962
GCA_021513075.1	GCA_021513075.1_02277	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	98.59	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP090985.1	2296441	2296869
GCA_021513075.1	GCA_021513075.1_02351	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP090985.1	2377507	2377854
GCA_021513075.1	GCA_021513075.1_02354	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP090985.1	2380031	2381320
GCA_025148875.1	GCA_025148875.1_01063	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.02	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXRP010000189.1	477	1877
GCA_025148875.1	GCA_025148875.1_02179	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.85	41.31	472	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXRP010000042.1	27064	28458
GCA_002196895.1	GCA_002196895.1_03773	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	74.96	46.03	478	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NIPV01000009.1	3577	5019
GCA_002250095.2	GCA_002250095.2_00024	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP017069.2	26830	27903
GCA_002250095.2	GCA_002250095.2_00157	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP017069.2	170489	171781
GCA_002250095.2	GCA_002250095.2_00304	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP017069.2	318498	319343
GCA_002250095.2	GCA_002250095.2_00305	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP017069.2	319450	321207
GCA_002250095.2	GCA_002250095.2_00306	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP017069.2	321197	321577
GCA_002250095.2	GCA_002250095.2_02061	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP017069.2	2071462	2071881
GCA_002998435.1	GCA_002998435.1_00304	nimIJ	NimIJ family 5-nitroimidazole reductase	core	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	HMM	171	172	95.93	79.39	165	WP_021588763.1	NimIJ family 5-nitroimidazole reductase	NF000262.1	NimIJ family 5-nitroimidazole reductase	CP027231.1	330956	331471
GCA_002998435.1	GCA_002998435.1_00667	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP027231.1	742486	744411
GCA_002861025.1	GCA_002861025.1_02175	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PKIR01000005.1	147367	149007
GCA_002861025.1	GCA_002861025.1_02195	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	PKIR01000006.1	342	1196
GCA_002861025.1	GCA_002861025.1_02197	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002586627.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	PKIR01000007.1	195	2114
GCA_014265015.1	GCA_014265015.1_00137	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMXY010000013.1	16606	18150
GCA_014265015.1	GCA_014265015.1_00138	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMXY010000013.1	18334	18894
GCA_014265015.1	GCA_014265015.1_00202	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXY010000017.1	495	1787
GCA_014265015.1	GCA_014265015.1_00206	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMXY010000017.1	5470	5817
GCA_014265015.1	GCA_014265015.1_00217	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMXY010000018.1	5254	5625
GCA_014265015.1	GCA_014265015.1_00218	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMXY010000018.1	5625	7382
GCA_014265015.1	GCA_014265015.1_00219	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMXY010000018.1	7482	9488
GCA_014265015.1	GCA_014265015.1_00230	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMXY010000020.1	238	981
GCA_014265015.1	GCA_014265015.1_00231	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMXY010000020.1	1198	1602
GCA_014265015.1	GCA_014265015.1_00236	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMXY010000022.1	421	1155
GCA_014265015.1	GCA_014265015.1_00913	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXY010000005.1	41990	43282
GCA_014265015.1	GCA_014265015.1_00971	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMXY010000006.1	10298	10678
GCA_014265015.1	GCA_014265015.1_00972	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMXY010000006.1	10668	12425
GCA_014265015.1	GCA_014265015.1_00973	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMXY010000006.1	12532	13377
GCA_014265015.1	GCA_014265015.1_01086	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMXY010000007.1	38367	40007
GCA_024759085.1	GCA_024759085.1_02232	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	300	96.00	75.09	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103084.1	2550887	2551777
GCA_024759085.1	GCA_024759085.1_03063	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	94.58	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103084.1	3379746	3381077
GCA_002204475.1	GCA_002204475.1_01970	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	NHRW01000002.1	130637	131602
GCA_002204475.1	GCA_002204475.1_01975	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	NHRW01000002.1	135748	137673
GCA_024167965.1	GCA_024167965.1_01735	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	601	593	98.99	34.49	603	WP_012705551.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	CP100127.1	1807581	1809386
GCA_001810635.1	GCA_001810635.1_00789	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV802293.1	8512	10152
GCA_001411485.1	GCA_001411485.1_01690	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LKPC01000008.1	68986	70881
GCA_000251825.2	GCA_000251825.2_00979	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AIKZ01000003.1	143258	144457
GCA_000251825.2	GCA_000251825.2_01528	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AIKZ01000001.1	139853	141316
GCA_000251825.2	GCA_000251825.2_01529	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AIKZ01000001.1	141337	142554
GCA_024105075.1	GCA_024105075.1_01492	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.85	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDUC010000031.1	2096	2506
GCA_025908475.1	GCA_025908475.1_00395	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	745	561	82.17	48.30	470	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP109781.1	416678	418915
GCA_025908475.1	GCA_025908475.1_02306	bepE	multidrug efflux RND transporter permease subunit BepE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1049	1051	99.71	94.37	1048	AAN29241.1	multidrug efflux RND transporter permease subunit BepE	NA	NA	CP109782.1	350085	353234
GCA_025908475.1	GCA_025908475.1_02739	blaOCH	OCH family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	390	390	100.00	97.95	390	WP_063860890.1	extended-spectrum class C beta-lactamase OCH-3	NF000264.2	OCH family extended-spectrum class C beta-lactamase	CP109782.1	793598	794770
GCA_025908475.1	GCA_025908475.1_03466	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	395	391	97.95	55.58	385	WP_063856077.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP109782.1	1497036	1498223
GCA_025908475.1	GCA_025908475.1_03969	cml	Cml family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	397	397	100.00	93.45	397	WP_061345584.1	Cml family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP109782.1	2022580	2023773
GCA_025908475.1	GCA_025908475.1_03985	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	266	266	100.00	74.44	266	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP109782.1	2039287	2040087
GCA_008329765.1	GCA_008329765.1_00455	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP021517.1	457065	458444
GCA_008329765.1	GCA_008329765.1_01175	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP021517.1	1205066	1205971
GCA_008329765.1	GCA_008329765.1_01295	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.57	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP021517.1	1336901	1338139
GCA_008329765.1	GCA_008329765.1_01296	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP021517.1	1338543	1339175
GCA_008329765.1	GCA_008329765.1_01298	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP021517.1	1340000	1341568
GCA_008329765.1	GCA_008329765.1_01493	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP021517.1	1546109	1547635
GCA_015546865.1	GCA_015546865.1_00047	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	96.48	59.12	137	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JADMUA010000012.1	5613	6041
GCA_015546865.1	GCA_015546865.1_00568	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JADMUA010000001.1	558065	559543
GCA_015546865.1	GCA_015546865.1_00625	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.08	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JADMUA010000001.1	614241	615965
GCA_015546865.1	GCA_015546865.1_00626	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.49	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JADMUA010000001.1	615967	617703
GCA_015546865.1	GCA_015546865.1_01838	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADMUA010000005.1	140506	141969
GCA_015546865.1	GCA_015546865.1_01839	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADMUA010000005.1	142089	143306
GCA_900475555.1	GCA_900475555.1_01642	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LS483396.1	1723761	1725185
GCA_900065875.1	GCA_900065875.1_01779	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LT160626.1	78441	78767
GCA_900065875.1	GCA_900065875.1_02413	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	LT160626.1	762323	763123
GCA_003858565.1	GCA_003858565.1_00627	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RQZI01000002.1	337513	338250
GCA_003858565.1	GCA_003858565.1_00628	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RQZI01000002.1	339357	341276
GCA_029925625.1	GCA_029925625.1_00070	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREFV010000011.1	16131	16976
GCA_029925625.1	GCA_029925625.1_00071	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREFV010000011.1	17114	18871
GCA_029925625.1	GCA_029925625.1_00072	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREFV010000011.1	18861	19241
GCA_029925625.1	GCA_029925625.1_01165	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREFV010000003.1	178497	178898
GCA_029925625.1	GCA_029925625.1_01166	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFV010000003.1	178916	180205
GCA_029925625.1	GCA_029925625.1_01278	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREFV010000003.1	322093	323166
GCA_029925625.1	GCA_029925625.1_02199	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREFV010000007.1	60515	61804
GCA_000210975.1	GCA_000210975.1_00993	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	FQ312030.1	924679	925878
GCA_027689215.1	GCA_027689215.1_00788	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAQFFA010000002.1	32920	33765
GCA_027689215.1	GCA_027689215.1_00789	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAQFFA010000002.1	33872	35629
GCA_027689215.1	GCA_027689215.1_00790	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAQFFA010000002.1	35619	35999
GCA_027689215.1	GCA_027689215.1_01519	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAQFFA010000005.1	37722	39014
GCA_027689215.1	GCA_027689215.1_01523	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQFFA010000005.1	42697	43044
GCA_027689215.1	GCA_027689215.1_01619	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAQFFA010000005.1	144650	145216
GCA_027689215.1	GCA_027689215.1_01620	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAQFFA010000005.1	145394	146938
GCA_030212385.1	GCA_030212385.1_02033	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	78.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JASOEC010000003.1	156697	157770
GCA_030212385.1	GCA_030212385.1_02353	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	69.57	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JASOEC010000005.1	49539	49958
GCA_030212385.1	GCA_030212385.1_02372	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.46	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASOEC010000005.1	69173	70462
GCA_030212385.1	GCA_030212385.1_02656	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JASOEC010000008.1	5601	6446
GCA_030212385.1	GCA_030212385.1_02657	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JASOEC010000008.1	6553	8310
GCA_030212385.1	GCA_030212385.1_02658	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASOEC010000008.1	8300	8680
GCA_900637555.1	GCA_900637555.1_01211	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	94	91	97.80	67.42	89	AAC38232.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	LR134378.1	1520672	1520956
GCA_003425505.1	GCA_003425505.1_01850	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031681.1	1770822	1772216
GCA_026782195.1	GCA_026782195.1_01270	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKUWB010000005.1	173902	174330
GCA_026782195.1	GCA_026782195.1_01980	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKUWB010000008.1	14447	16342
GCA_001073445.1	GCA_001073445.1_01345	aac(6)-Im	aminoglycoside N-acetyltransferase AAC(6)-Im	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	EXACTP	178	178	100.00	100.00	178	WP_010708502.1	aminoglycoside N-acetyltransferase AAC(6)-Im	NF000016.1	aminoglycoside N-acetyltransferase AAC(6)-Im	JVBO01000030.1	5500	6036
GCA_001073445.1	GCA_001073445.1_01346	aph(2)-IIa	aminoglycoside O-phosphotransferase APH(2)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	299	299	100.00	100.00	299	WP_016439437.1	aminoglycoside O-phosphotransferase APH(2)-IIa	NF000015.3	aminoglycoside O-phosphotransferase APH(2)-IIa	JVBO01000030.1	6080	6979
GCA_001073445.1	GCA_001073445.1_01966	tetA(60)	tetracycline efflux ABC transporter Tet(60) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	579	579	100.00	93.09	579	WP_100931730.1	tetracycline efflux ABC transporter Tet(60) subunit A	NA	NA	JVBO01000045.1	75259	76998
GCA_001073445.1	GCA_001073445.1_01967	tetB(60)	tetracycline efflux ABC transporter Tet(60) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	579	579	100.00	100.00	579	WP_049554487.1	tetracycline efflux ABC transporter Tet(60) subunit B	NA	NA	JVBO01000045.1	76995	78734
GCA_009378535.1	GCA_009378535.1_00838	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	72.51	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	RCJP01000001.1	235315	236958
GCA_009378535.1	GCA_009378535.1_01086	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	RCJP01000009.1	57042	57983
GCA_028527745.1	GCA_028527745.1_00308	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.78	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAQPSL010000001.1	328725	330167
GCA_028527745.1	GCA_028527745.1_00849	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQPSL010000002.1	731	1585
GCA_001997185.1	GCA_001997185.1_00340	blaL1	L1 family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	BLASTP	307	290	100.00	99.66	290	WP_032966056.1	L1 family subclass B3 metallo-beta-lactamase	NF033106.1	L1 family subclass B3 metallo-beta-lactamase	MTGD01000011.1	131380	132303
GCA_001997185.1	GCA_001997185.1_00630	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	304	100.00	70.72	304	WP_063842700.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	MTGD01000014.1	70678	71589
GCA_001997185.1	GCA_001997185.1_00735	copB	copper-binding protein CopB	plus	STRESS	METAL	COPPER	COPPER	EXACTP	422	422	100.00	100.00	422	ADR70748.1	copper-binding protein CopB	NA	NA	MTGD01000016.1	56908	58176
GCA_001997185.1	GCA_001997185.1_00736	copA	laccase-like oxidase CopA	plus	STRESS	METAL	COPPER	COPPER	PARTIALP	556	623	89.25	99.28	556	ADR70747.1	laccase-like oxidase CopA	NA	NA	MTGD01000016.1	58173	59843
GCA_001997185.1	GCA_001997185.1_01828	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	144	150	85.33	56.25	128	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	MTGD01000034.1	938	1372
GCA_001997185.1	GCA_001997185.1_01951	smeF	multidrug efflux RND transporter outer membrane subunit SmeF	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	461	466	98.71	98.26	460	CAC14596.1	multidrug efflux RND transporter outer membrane subunit SmeF	NA	NA	MTGD01000035.1	79211	80596
GCA_001997185.1	GCA_001997185.1_02352	aph(6)	APH(6) family putative aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	270	270	99.63	98.88	269	WP_012480135.1	APH(6) family putative aminoglycoside O-phosphotransferase	NF012160.0	APH(6) family putative aminoglycoside O-phosphotransferase	MTGD01000041.1	47382	48194
GCA_001997185.1	GCA_001997185.1_02671	aac(6)-Iz	aminoglycoside N-acetyltransferase AAC(6)-Iz	core	AMR	AMR	AMINOGLYCOSIDE	TOBRAMYCIN	EXACTP	153	153	100.00	100.00	153	WP_024956926.1	aminoglycoside N-acetyltransferase AAC(6)-Iz	NF000138.1	aminoglycoside N-acetyltransferase AAC(6)-Iz	MTGD01000050.1	48214	48675
GCA_001997185.1	GCA_001997185.1_03974	emrC	multidrug efflux transporter outer membrane subunit EmrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	497	497	100.00	98.39	497	CAQ45062.1	multidrug efflux transporter outer membrane subunit EmrC	NA	NA	MTGD01000008.1	52070	53563
GCA_001997185.1	GCA_001997185.1_03975	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	393	393	100.00	100.00	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	MTGD01000008.1	53575	54756
GCA_001997185.1	GCA_001997185.1_03976	emrB	multidrug efflux MFS transporter permease subunit EmrB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	528	528	100.00	99.81	528	CAQ45064.1	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	MTGD01000008.1	54764	56350
GCA_001997185.1	GCA_001997185.1_04107	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	50.00	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	MTGD01000081.1	28362	28637
GCA_001997185.1	GCA_001997185.1_04183	aph(3)-IIc	aminoglycoside O-phosphotransferase APH(3)-IIc	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	314	267	93.63	99.60	250	WP_012479999.1	aminoglycoside O-phosphotransferase APH(3)-IIc	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	MTGD01000084.1	32418	33362
GCA_020740065.1	GCA_020740065.1_00007	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.21	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJGBF010000010.1	3083	4375
GCA_020740065.1	GCA_020740065.1_00011	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAJGBF010000010.1	8058	8405
GCA_020740065.1	GCA_020740065.1_00031	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAJGBF010000011.1	2235	2615
GCA_020740065.1	GCA_020740065.1_00032	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAJGBF010000011.1	2605	4362
GCA_020740065.1	GCA_020740065.1_00033	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAJGBF010000011.1	4469	5314
GCA_020740065.1	GCA_020740065.1_00040	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAJGBF010000012.1	2058	2381
GCA_020740065.1	GCA_020740065.1_01503	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	70.80	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAJGBF010000003.1	219162	219584
GCA_020740065.1	GCA_020740065.1_01549	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAJGBF010000003.1	274937	276010
GCA_020740065.1	GCA_020740065.1_02211	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAJGBF010000007.1	60493	61782
GCA_007858165.1	GCA_007858165.1_02368	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	99.26	63.70	135	WP_015741374.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	VFEP01000002.1	477569	477979
GCA_007858165.1	GCA_007858165.1_04098	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	413	100.00	80.05	416	CAK15125.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	VFEP01000005.1	50215	51456
GCA_007858165.1	GCA_007858165.1_04542	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	380	397	94.21	58.82	374	WP_104009838.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	VFEP01000005.1	565528	566670
GCA_007858165.1	GCA_007858165.1_05113	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	256	267	96.25	56.81	257	WP_012479999.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	VFEP01000007.1	143624	144394
GCA_017655925.1	GCA_017655925.1_00501	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	127	123	91.06	48.67	113	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP040424.1	493726	494109
GCA_029926435.1	GCA_029926435.1_00006	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAREHK010000010.1	3938	4261
GCA_029926435.1	GCA_029926435.1_01319	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREHK010000002.1	599981	601054
GCA_029926435.1	GCA_029926435.1_02179	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHK010000005.1	63200	64489
GCA_029926435.1	GCA_029926435.1_02440	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAREHK010000009.1	22471	22956
GCA_006539665.1	GCA_006539665.1_01539	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	269	272	99.26	69.26	270	WP_012045014.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	BJNL01000011.1	4975	5784
GCA_006539665.1	GCA_006539665.1_03622	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	299	305	97.38	54.21	297	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	BJNL01000027.1	73329	74228
GCA_006539665.1	GCA_006539665.1_03679	blaBJP	BJP family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	295	294	99.66	85.32	293	WP_011088970.1	BJP family subclass B3 metallo-beta-lactamase	NF012140.0	BJP family subclass B3 metallo-beta-lactamase	BJNL01000029.1	2161	3048
GCA_002850315.1	GCA_002850315.1_01633	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP013943.1	1630929	1631309
GCA_002850315.1	GCA_002850315.1_01634	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	94.70	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP013943.1	1631299	1633056
GCA_002850315.1	GCA_002850315.1_01635	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP013943.1	1633163	1634008
GCA_002850315.1	GCA_002850315.1_01776	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP013943.1	1729028	1730467
GCA_002850315.1	GCA_002850315.1_02466	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP013943.1	2441623	2442690
GCA_002850315.1	GCA_002850315.1_02516	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP013943.1	2500487	2500723
GCA_002850315.1	GCA_002850315.1_02623	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.31	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP013943.1	2610049	2611338
GCA_002850315.1	GCA_002850315.1_02631	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP013943.1	2618589	2619239
GCA_002850315.1	GCA_002850315.1_02632	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP013943.1	2619321	2620964
GCA_002850315.1	GCA_002850315.1_02633	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	CP013943.1	2621022	2621357
GCA_002850315.1	GCA_002850315.1_02702	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP013943.1	2685469	2685840
GCA_002850315.1	GCA_002850315.1_02703	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP013943.1	2685840	2687597
GCA_002850315.1	GCA_002850315.1_02704	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP013943.1	2687697	2689703
GCA_019013055.1	GCA_019013055.1_00267	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAGIRD010000030.1	3604	4335
GCA_002014755.1	GCA_002014755.1_00287	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	MUYN01000001.1	288052	289710
GCA_002014755.1	GCA_002014755.1_01121	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	MUYN01000005.1	142933	144132
GCA_007004175.1	GCA_007004175.1_00100	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	VJML01000007.1	96232	97077
GCA_007004175.1	GCA_007004175.1_00101	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	VJML01000007.1	97184	98941
GCA_007004175.1	GCA_007004175.1_00102	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	VJML01000007.1	98931	99311
GCA_007004175.1	GCA_007004175.1_00762	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	VJML01000017.1	15326	16870
GCA_007004175.1	GCA_007004175.1_00763	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	VJML01000017.1	17048	17614
GCA_007004175.1	GCA_007004175.1_00808	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	EXACTP	1024	1024	100.00	100.00	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	VJML01000019.1	16013	19087
GCA_007004175.1	GCA_007004175.1_00854	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	VJML01000021.1	266	589
GCA_007004175.1	GCA_007004175.1_00857	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	VJML01000021.1	4333	4656
GCA_007004175.1	GCA_007004175.1_00866	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003260.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	VJML01000025.1	1095	1829
GCA_007004175.1	GCA_007004175.1_01685	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	86.25	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	VJML01000003.1	176995	178284
GCA_030230925.1	GCA_030230925.1_00170	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JASPEA010000022.1	1026	1586
GCA_030230925.1	GCA_030230925.1_00171	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JASPEA010000022.1	1770	3314
GCA_030230925.1	GCA_030230925.1_01444	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASPEA010000016.1	3071	3418
GCA_030230925.1	GCA_030230925.1_01448	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASPEA010000016.1	7101	8393
GCA_030230925.1	GCA_030230925.1_01983	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JASPEA010000025.1	26	406
GCA_030230925.1	GCA_030230925.1_01984	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	509	585	87.01	99.80	509	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	JASPEA010000025.1	396	1925
GCA_030230925.1	GCA_030230925.1_02054	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.82	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JASPEA010000003.1	73497	74789
GCA_017874535.1	GCA_017874535.1_01172	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	123	123	100.00	51.59	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAGGLS010000006.1	50481	50852
GCA_000477895.1	GCA_000477895.1_00697	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KI515708.1	706396	707250
GCA_000463425.1	GCA_000463425.1_00083	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP003859.1	68224	70143
GCA_019703695.1	GCA_019703695.1_01583	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AP018778.1	1552779	1554419
GCA_019703695.1	GCA_019703695.1_01704	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018778.1	1652201	1653595
GCA_900444865.1	GCA_900444865.1_00131	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	409	392	100.00	75.38	394	WP_430673475.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	UFRL01000002.1	110149	111378
GCA_900444865.1	GCA_900444865.1_00967	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	950	949	99.79	95.78	947	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	UFRL01000002.1	987376	990228
GCA_900444865.1	GCA_900444865.1_02238	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	397	397	98.74	79.08	392	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	UFRL01000002.1	2279394	2280587
GCA_900444865.1	GCA_900444865.1_02741	ant(3)-IIa	aminoglycoside nucleotidyltransferase ANT(3)-IIa	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN/STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001279068.1	aminoglycoside nucleotidyltransferase ANT(3)-IIa	NF033220.1	ANT(3)-II family aminoglycoside nucleotidyltransferase	UFRL01000001.1	105509	106297
GCA_015273985.1	GCA_015273985.1_00818	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JACGQB010000002.1	299100	300173
GCA_015273985.1	GCA_015273985.1_01803	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGQB010000007.1	60499	61788
GCA_015273985.1	GCA_015273985.1_02510	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGQB010000016.1	25018	26307
GCA_015273985.1	GCA_015273985.1_02511	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACGQB010000016.1	26325	26726
GCA_015273985.1	GCA_015273985.1_02547	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACGQB010000018.1	2289	3833
GCA_015273985.1	GCA_015273985.1_02548	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACGQB010000018.1	4017	4577
GCA_015273985.1	GCA_015273985.1_02551	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGQB010000018.1	6368	6748
GCA_015273985.1	GCA_015273985.1_02552	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGQB010000018.1	6738	8495
GCA_015273985.1	GCA_015273985.1_02553	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGQB010000018.1	8602	9447
GCA_015273985.1	GCA_015273985.1_02589	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACGQB010000021.1	2461	4467
GCA_015273985.1	GCA_015273985.1_02590	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JACGQB010000021.1	4567	5553
GCA_015273985.1	GCA_015273985.1_02615	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACGQB010000027.1	971	1705
GCA_015273985.1	GCA_015273985.1_02616	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JACGQB010000028.1	80	1519
GCA_015273985.1	GCA_015273985.1_02619	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGQB010000029.1	1159	1644
GCA_023148105.1	GCA_023148105.1_00644	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHXOG010000002.1	132283	134202
GCA_030217155.1	GCA_030217155.1_00681	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JASONF010000001.1	318029	319228
GCA_000215745.1	GCA_000215745.1_00682	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.22	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP002824.1	681801	682916
GCA_000215745.1	GCA_000215745.1_00683	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1222	1219	100.00	84.38	1223	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP002824.1	682963	686631
GCA_000215745.1	GCA_000215745.1_00686	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	724	724	100.00	100.00	724	AEG95593.1	siderophore salmochelin receptor IroN	NA	NA	CP002824.1	689044	691218
GCA_000215745.1	GCA_000215745.1_01431	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	96.45	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP002824.1	1431919	1433103
GCA_000215745.1	GCA_000215745.1_01564	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	298	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP002824.1	1567908	1568804
GCA_000215745.1	GCA_000215745.1_02126	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	96.40	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP002824.1	2163609	2164028
GCA_000215745.1	GCA_000215745.1_02532	ampC-Kaer	AmpC-Kaer family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	386	381	100.00	98.69	381	WP_063406924.1	extended-spectrum class C beta-lactamase AmpC-Kaer-1	NF041662.1	AmpC-Kaer family extended-spectrum class C beta-lactamase	CP002824.1	2605832	2606992
GCA_000215745.1	GCA_000215745.1_03083	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	97.56	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP002824.1	3180066	3181298
GCA_000215745.1	GCA_000215745.1_03457	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	97.43	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP002824.1	3586836	3589988
GCA_000215745.1	GCA_000215745.1_04948	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	144	141	99.29	87.14	140	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP002824.1	5102158	5102592
GCA_003491025.1	GCA_003491025.1_00869	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	94.40	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQFX01000005.1	105209	106603
GCA_000009645.1	GCA_000009645.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	BA000018.3	40197	40595
GCA_000009645.1	GCA_000009645.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	BA000018.3	40818	41561
GCA_000009645.1	GCA_000009645.1_00041	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	BA000018.3	45031	47037
GCA_000009645.1	GCA_000009645.1_00042	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	BA000018.3	47137	48894
GCA_000009645.1	GCA_000009645.1_00043	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	BA000018.3	48894	49265
GCA_000009645.1	GCA_000009645.1_00052	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BA000018.3	56002	56733
GCA_000009645.1	GCA_000009645.1_00053	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BA000018.3	56859	57641
GCA_000009645.1	GCA_000009645.1_00135	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	BA000018.3	151634	152992
GCA_000009645.1	GCA_000009645.1_00333	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	BA000018.3	380501	381856
GCA_000009645.1	GCA_000009645.1_00370	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	BA000018.3	415162	415773
GCA_000009645.1	GCA_000009645.1_00826	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BA000018.3	870517	871299
GCA_000009645.1	GCA_000009645.1_00827	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BA000018.3	871425	872156
GCA_000009645.1	GCA_000009645.1_01604	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BA000018.3	1685864	1686595
GCA_000009645.1	GCA_000009645.1_01605	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BA000018.3	1686721	1687503
GCA_000009645.1	GCA_000009645.1_01725	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BA000018.3	1831138	1832430
GCA_000009645.1	GCA_000009645.1_01764	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	BA000018.3	1863563	1864285
GCA_000009645.1	GCA_000009645.1_01765	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	BA000018.3	1864410	1865117
GCA_000009645.1	GCA_000009645.1_01770	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	BA000018.3	1869247	1870230
GCA_000009645.1	GCA_000009645.1_01771	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	BA000018.3	1870232	1871167
GCA_000009645.1	GCA_000009645.1_01779	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	BA000018.3	1877369	1878124
GCA_000009645.1	GCA_000009645.1_01780	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	BA000018.3	1878163	1878558
GCA_000009645.1	GCA_000009645.1_01782	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	BA000018.3	1879088	1879816
GCA_000009645.1	GCA_000009645.1_01783	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	BA000018.3	1879851	1880570
GCA_000009645.1	GCA_000009645.1_01784	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	BA000018.3	1880851	1881615
GCA_000009645.1	GCA_000009645.1_01940	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	BA000018.3	2006528	2006878
GCA_000009645.1	GCA_000009645.1_01945	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	BA000018.3	2009086	2009577
GCA_000009645.1	GCA_000009645.1_01949	sep	staphylococcal enterotoxin type P	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	260	260	100.00	100.00	260	ADC38120.1	staphylococcal enterotoxin type P	NA	NA	BA000018.3	2011380	2012162
GCA_000009645.1	GCA_000009645.1_02012	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	BA000018.3	2057159	2057881
GCA_000009645.1	GCA_000009645.1_02013	sec3	staphylococcal enterotoxin type C3	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	BAB43097.1	staphylococcal enterotoxin type C3	NA	NA	BA000018.3	2058050	2058850
GCA_000009645.1	GCA_000009645.1_02015	tst	toxic shock syndrome toxin TSST-1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	234	100.00	99.15	234	AAA26682.1	toxic shock syndrome toxin TSST-1	NA	NA	BA000018.3	2061076	2061780
GCA_000009645.1	GCA_000009645.1_02040	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	BA000018.3	2079076	2079210
GCA_000009645.1	GCA_000009645.1_02162	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BA000018.3	2200193	2200924
GCA_000009645.1	GCA_000009645.1_02163	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BA000018.3	2201050	2201832
GCA_000009645.1	GCA_000009645.1_02192	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	BA000018.3	2237543	2238985
GCA_000009645.1	GCA_000009645.1_02364	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	BA000018.3	2389328	2389747
GCA_000009645.1	GCA_000009645.1_02448	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	BA000018.3	2477890	2478855
GCA_000009645.1	GCA_000009645.1_02449	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	BA000018.3	2479422	2480369
GCA_000009645.1	GCA_000009645.1_02450	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	BA000018.3	2480371	2481348
GCA_000009645.1	GCA_000009645.1_02638	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	BA000018.3	2672535	2673266
GCA_000009645.1	GCA_000009645.1_02639	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	BA000018.3	2673392	2674174
GCA_000009645.1	GCA_000009645.1_02686	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	BA000018.3	2728001	2729530
GCA_000009645.1	GCA_000009645.1_02720	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	BA000018.3	2772860	2773912
GCA_000009645.1	GCA_000009645.1_02771	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	AP003139.1	4501	5118
GCA_000009645.1	GCA_000009645.1_02776	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	AP003139.1	7945	8790
GCA_000009645.1	GCA_000009645.1_02777	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	AP003139.1	8897	10654
GCA_000009645.1	GCA_000009645.1_02778	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AP003139.1	10644	11024
GCA_000009645.1	GCA_000009645.1_02782	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	AP003139.1	14107	14421
GCA_000009645.1	GCA_000009645.1_02783	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.77	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP003139.1	14421	15710
GCA_000009645.1	GCA_000009645.1_02784	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	AP003139.1	15728	16123
GCA_962715145.1	GCA_962715145.1_00261	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIXS010000002.1	56247	57773
GCA_962715145.1	GCA_962715145.1_00458	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIXS010000003.1	79075	80313
GCA_962715145.1	GCA_962715145.1_00459	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.14	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIXS010000003.1	80563	81195
GCA_962715145.1	GCA_962715145.1_00746	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIXS010000005.1	77031	78410
GCA_000613725.1	GCA_000613725.1_00031	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	BAJN01000032.1	574	2499
GCA_000613725.1	GCA_000613725.1_00035	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	BAJN01000031.1	4073	5038
GCA_000613725.1	GCA_000613725.1_00074	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	BAJN01000026.1	7385	8185
GCA_019375915.1	GCA_019375915.1_01596	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXCT010000005.1	113025	113990
GCA_019375915.1	GCA_019375915.1_01865	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXCT010000006.1	205616	207541
GCA_009909445.1	GCA_009909445.1_00065	ampC-Kaer	AmpC-Kaer family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	386	381	100.00	97.90	381	WP_063406924.1	extended-spectrum class C beta-lactamase AmpC-Kaer-1	NF041662.1	AmpC-Kaer family extended-spectrum class C beta-lactamase	CP047669.1	63592	64752
GCA_009909445.1	GCA_009909445.1_00617	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	97.56	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP047669.1	638433	639665
GCA_009909445.1	GCA_009909445.1_00980	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	97.43	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP047669.1	1026318	1029470
GCA_009909445.1	GCA_009909445.1_02417	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	144	141	99.29	87.14	140	AAB42203.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP047669.1	2493734	2494168
GCA_009909445.1	GCA_009909445.1_03232	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.49	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP047669.1	3344766	3345881
GCA_009909445.1	GCA_009909445.1_03233	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1222	1219	100.00	84.38	1223	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP047669.1	3345928	3349596
GCA_009909445.1	GCA_009909445.1_03236	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	724	100.00	99.86	724	AEG95593.1	siderophore salmochelin receptor IroN	NA	NA	CP047669.1	3352009	3354183
GCA_009909445.1	GCA_009909445.1_03953	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	96.45	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP047669.1	4071523	4072707
GCA_009909445.1	GCA_009909445.1_04176	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	298	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP047669.1	4296592	4297488
GCA_009909445.1	GCA_009909445.1_04434	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	91.61	143	AAD11743.1	silver-binding protein SilE	NA	NA	CP047669.1	4553831	4554262
GCA_009909445.1	GCA_009909445.1_04435	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	491	491	99.80	97.76	490	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	CP047669.1	4554512	4555987
GCA_009909445.1	GCA_009909445.1_04436	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.79	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	CP047669.1	4555980	4556660
GCA_009909445.1	GCA_009909445.1_04437	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	98.26	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	CP047669.1	4556850	4558235
GCA_009909445.1	GCA_009909445.1_04438	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	99.15	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	CP047669.1	4558264	4558617
GCA_009909445.1	GCA_009909445.1_04439	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	98.37	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	CP047669.1	4558731	4560023
GCA_009909445.1	GCA_009909445.1_04440	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	99.43	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	CP047669.1	4560034	4563180
GCA_009909445.1	GCA_009909445.1_04442	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	813	824	98.79	98.40	814	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	CP047669.1	4563835	4566276
GCA_009909445.1	GCA_009909445.1_04446	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	EXACTP	605	605	100.00	100.00	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	CP047669.1	4568257	4570074
GCA_009909445.1	GCA_009909445.1_04447	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	99.66	296	CAA58526.1	copper-binding protein PcoB	NA	NA	CP047669.1	4570074	4570970
GCA_009909445.1	GCA_009909445.1_04448	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	EXACTP	126	126	100.00	100.00	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	CP047669.1	4571010	4571390
GCA_009909445.1	GCA_009909445.1_04449	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	BLASTP	309	309	100.00	99.35	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	CP047669.1	4571395	4572324
GCA_009909445.1	GCA_009909445.1_04450	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	CP047669.1	4572379	4573059
GCA_009909445.1	GCA_009909445.1_04451	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.14	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	CP047669.1	4573056	4574456
GCA_009909445.1	GCA_009909445.1_04452	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	94.44	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	CP047669.1	4574672	4575106
GCA_009909445.1	GCA_009909445.1_04457	tet(A)	tetracycline efflux MFS transporter Tet(A)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	399	399	100.00	100.00	399	WP_000804064.1	tetracycline efflux MFS transporter Tet(A)	NF012193.0	tetracycline efflux MFS transporter Tet(A)	CP047669.1	4579528	4580727
GCA_009909445.1	GCA_009909445.1_04461	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP047669.1	4585455	4586315
GCA_009909445.1	GCA_009909445.1_04462	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP047669.1	4586477	4587292
GCA_009909445.1	GCA_009909445.1_04463	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	CP047669.1	4587737	4588156
GCA_009909445.1	GCA_009909445.1_04464	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CP047669.1	4588156	4588992
GCA_009909445.1	GCA_009909445.1_04467	tet(A)	tetracycline efflux MFS transporter Tet(A)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	399	399	100.00	100.00	399	WP_000804063.1	tetracycline efflux MFS transporter Tet(A)	NF012193.0	tetracycline efflux MFS transporter Tet(A)	CP047669.1	4590328	4591527
GCA_009909445.1	GCA_009909445.1_04470	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	404	404	100.00	100.00	404	WP_000214121.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP047669.1	4592127	4593341
GCA_009909445.1	GCA_009909445.1_04480	dfrA12	trimethoprim-resistant dihydrofolate reductase DfrA12	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_001083725.1	trimethoprim-resistant dihydrofolate reductase DfrA12	NF000053.2	trimethoprim-resistant dihydrofolate reductase DfrA12	CP047669.1	4600442	4600939
GCA_009909445.1	GCA_009909445.1_04481	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206356.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP047669.1	4601359	4602138
GCA_009909445.1	GCA_009909445.1_04482	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP047669.1	4602302	4602649
GCA_009909445.1	GCA_009909445.1_04483	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP047669.1	4602643	4603482
GCA_009909445.1	GCA_009909445.1_04488	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP047669.1	4606417	4607232
GCA_009909445.1	GCA_009909445.1_04492	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	100.00	78.21	78	AAA88371.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP047669.1	4610220	4610456
GCA_009909445.1	GCA_009909445.1_04493	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	120	121	100.00	82.64	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP047669.1	4610453	4610815
GCA_009909445.1	GCA_009909445.1_04494	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	564	561	100.00	85.31	565	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP047669.1	4610833	4612527
GCA_009909445.1	GCA_009909445.1_04495	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	140	140	100.00	100.00	140	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP047669.1	4612579	4613001
GCA_009909445.1	GCA_009909445.1_04496	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	90.11	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP047669.1	4613037	4613312
GCA_009909445.1	GCA_009909445.1_04497	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	AAB59075.1	mercuric transport protein MerT	NA	NA	CP047669.1	4613326	4613676
GCA_009909445.1	GCA_009909445.1_04498	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	93.75	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP047669.1	4613748	4614182
GCA_009909445.1	GCA_009909445.1_04749	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	96.40	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP047669.1	4878868	4879287
GCA_009909445.1	GCA_009909445.1_05117	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	96.35	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP047668.1	27857	28435
GCA_009909445.1	GCA_009909445.1_05121	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	193	193	100.00	98.45	193	AAA86846.1	tellurium resistance-associated protein TerZ	NA	NA	CP047668.1	31182	31763
GCA_009909445.1	GCA_009909445.1_05128	terW	tellurium resistance protein TerW	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	155	155	100.00	100.00	155	AAC44736.1	tellurium resistance protein TerW	NA	NA	CP047668.1	38337	38804
GCA_009909445.1	GCA_009909445.1_05296	blaCTX-M-65	extended-spectrum class A beta-lactamase CTX-M-65	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_013188475.1	extended-spectrum class A beta-lactamase CTX-M-65	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	CP047668.1	199563	200438
GCA_009909445.1	GCA_009909445.1_05301	fosA3	fosfomycin resistance glutathione transferase FosA3	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	138	138	100.00	100.00	138	WP_014839980.1	fosfomycin resistance glutathione transferase FosA3	NF000075.1	FosA3/FosA4 family fosfomycin resistance glutathione transferase	CP047668.1	203191	203607
GCA_009909445.1	GCA_009909445.1_05305	dfrA12	trimethoprim-resistant dihydrofolate reductase DfrA12	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_001083725.1	trimethoprim-resistant dihydrofolate reductase DfrA12	NF000053.2	trimethoprim-resistant dihydrofolate reductase DfrA12	CP047668.1	206130	206627
GCA_009909445.1	GCA_009909445.1_05306	aadA2	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	259	263	98.48	99.61	259	WP_001206356.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA2	NF012157.0	ANT(3)-I family aminoglycoside nucleotidyltransferase	CP047668.1	207047	207826
GCA_009909445.1	GCA_009909445.1_05307	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP047668.1	207990	208337
GCA_009909445.1	GCA_009909445.1_05308	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP047668.1	208331	209170
GCA_009909445.1	GCA_009909445.1_05313	ble	bleomycin binding protein Ble-MBL	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	121	121	100.00	100.00	121	WP_004201167.1	bleomycin binding protein Ble-MBL	NF012202.0	bleomycin binding protein Ble-MBL	CP047668.1	213576	213941
GCA_009909445.1	GCA_009909445.1_05314	blaNDM-9	taniborbactam-resistant subclass B1 metallo-beta-lactamase NDM-9	core	AMR	AMR	BETA-LACTAM	CARBAPENEM/TANIBORBACTAM	ALLELEP	270	270	100.00	100.00	270	WP_032495672.1	taniborbactam-resistant subclass B1 metallo-beta-lactamase NDM-9	NF000259.2	NDM family subclass B1 metallo-beta-lactamase	CP047668.1	213945	214757
GCA_009909445.1	GCA_009909445.1_05317	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	93.75	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP047668.1	215999	216433
GCA_009909445.1	GCA_009909445.1_05318	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	AAB59075.1	mercuric transport protein MerT	NA	NA	CP047668.1	216505	216855
GCA_009909445.1	GCA_009909445.1_05319	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	90.11	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP047668.1	216869	217144
GCA_009909445.1	GCA_009909445.1_05320	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	140	140	100.00	100.00	140	AAC33908.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	CP047668.1	217180	217602
GCA_009909445.1	GCA_009909445.1_05321	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	564	561	100.00	85.31	565	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP047668.1	217654	219348
GCA_009909445.1	GCA_009909445.1_05322	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	120	121	100.00	82.64	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP047668.1	219366	219728
GCA_009909445.1	GCA_009909445.1_05323	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	HMM	78	78	100.00	78.21	78	AAA88371.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP047668.1	219725	219961
GCA_009909445.1	GCA_009909445.1_05327	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP047668.1	222949	223764
GCA_009909445.1	GCA_009909445.1_05333	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	404	404	100.00	100.00	404	WP_000214121.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP047668.1	228512	229726
GCA_030176115.1	GCA_030176115.1_00257	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.30	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVI010000016.1	4521	5375
GCA_009716755.1	GCA_009716755.1_00741	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	WMXJ01000002.1	138806	140023
GCA_009716755.1	GCA_009716755.1_00742	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	WMXJ01000002.1	140143	141606
GCA_900538375.1	GCA_900538375.1_01412	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UWSM01000007.1	23141	24781
GCA_910574905.1	GCA_910574905.1_01816	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CAJTDT010000004.1	126640	127932
GCA_910574905.1	GCA_910574905.1_02489	fosD	fosfomycin resistance bacillithiol transferase FosD	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000616116.1	fosfomycin resistance bacillithiol transferase FosD	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CAJTDT010000014.1	3132	3551
GCA_003989245.1	GCA_003989245.1_00131	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RBLX01000011.1	72477	73331
GCA_000487975.1	GCA_000487975.1_01617	cxpE	chloramphenicol efflux transporter CxpE	plus	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	406	397	97.23	76.68	386	AKA30736.1	chloramphenicol efflux transporter CxpE	NF045801.1	chloramphenicol efflux transporter CxpE	KI530561.1	1616828	1618048
GCA_000487975.1	GCA_000487975.1_02605	blaOXA-283	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	276	276	100.00	100.00	276	WP_004647119.1	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-283	NF000436.2	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase	KI530565.1	613221	614051
GCA_000487975.1	GCA_000487975.1_03218	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.57	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	KI530566.1	151471	154320
GCA_000487975.1	GCA_000487975.1_03219	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	94.92	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	KI530566.1	154530	155417
GCA_000487975.1	GCA_000487975.1_03220	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	95.07	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	KI530566.1	155514	156125
GCA_000487975.1	GCA_000487975.1_03283	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.25	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	KI530568.1	128	583
GCA_000487975.1	GCA_000487975.1_03284	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	94.83	116	CAA70196.1	mercuric transport protein MerT	NA	NA	KI530568.1	655	1005
GCA_000487975.1	GCA_000487975.1_03285	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	84.62	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	KI530568.1	1019	1294
GCA_000487975.1	GCA_000487975.1_03286	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	KI530568.1	1322	1747
GCA_000487975.1	GCA_000487975.1_03287	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	97.50	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KI530568.1	1786	3471
GCA_000487975.1	GCA_000487975.1_03288	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.91	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	KI530568.1	3489	3854
GCA_000487975.1	GCA_000487975.1_03289	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	KI530568.1	3851	4087
GCA_900636385.1	GCA_900636385.1_00402	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LR134269.1	435653	436945
GCA_025909465.1	GCA_025909465.1_00261	dfrF	trimethoprim-resistant dihydrofolate reductase DfrF	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	164	164	100.00	100.00	164	WP_002322211.1	trimethoprim-resistant dihydrofolate reductase DfrF	NF000333.1	trimethoprim-resistant dihydrofolate reductase DfrF	JAPAHY010000012.1	49534	50028
GCA_025909465.1	GCA_025909465.1_01659	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_063856405.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JAPAHY010000005.1	71828	73747
GCA_027595705.1	GCA_027595705.1_00030	emrD	multidrug efflux MFS transporter EmrD	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	394	394	100.00	96.45	394	ACN65732.1	multidrug efflux MFS transporter EmrD	NA	NA	CP074545.1	28459	29643
GCA_027595705.1	GCA_027595705.1_00731	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	724	724	100.00	100.00	724	CCG33322.1	siderophore salmochelin receptor IroN	NA	NA	CP074545.1	736583	738757
GCA_027595705.1	GCA_027595705.1_00734	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1222	1219	100.00	84.30	1223	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP074545.1	741170	744838
GCA_027595705.1	GCA_027595705.1_00735	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	89.22	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP074545.1	744885	746000
GCA_027595705.1	GCA_027595705.1_01634	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	144	141	99.29	85.71	140	BAA24824.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP074545.1	1643388	1643822
GCA_027595705.1	GCA_027595705.1_01786	clbB	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	3206	3206	100.00	100.00	3206	AMQ58400.1	colibactin hybrid non-ribosomal peptide synthetase/type I polyketide synthase ClbB	NA	NA	CP074545.1	1812464	1822084
GCA_027595705.1	GCA_027595705.1_01798	clbN	colibactin non-ribosomal peptide synthetase ClbN	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	1455	1455	100.00	100.00	1455	AMH08480.1	colibactin non-ribosomal peptide synthetase ClbN	NA	NA	CP074545.1	1852180	1856547
GCA_027595705.1	GCA_027595705.1_01832	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.50	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP074545.1	1904812	1906614
GCA_027595705.1	GCA_027595705.1_01833	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.33	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP074545.1	1906601	1908403
GCA_027595705.1	GCA_027595705.1_03206	oqxB	multidrug efflux RND transporter permease subunit OqxB	core	AMR	AMR	PHENICOL/QUINOLONE	PHENICOL/QUINOLONE	BLASTP	1050	1050	99.90	97.43	1049	WP_012967412.1	multidrug efflux RND transporter permease subunit OqxB9	NF000037.1	multidrug efflux RND transporter permease subunit OqxB	CP074545.1	3265235	3268387
GCA_027595705.1	GCA_027595705.1_03610	kdeA	multidrug efflux MFS transporter KdeA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	410	410	99.76	97.80	409	ABR76310.1	multidrug efflux MFS transporter KdeA	NA	NA	CP074545.1	3689454	3690686
GCA_027595705.1	GCA_027595705.1_04225	ampC-Kaer	AmpC-Kaer family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	386	381	100.00	100.00	381	WP_063406924.1	extended-spectrum class C beta-lactamase AmpC-Kaer-1	NF041662.1	AmpC-Kaer family extended-spectrum class C beta-lactamase	CP074545.1	4292251	4293411
GCA_027595705.1	GCA_027595705.1_04624	fosA	FosA5 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	94.96	139	WP_114473955.1	fosfomycin resistance glutathione transferase FosA9	NF040540.1	FosA5 family fosfomycin resistance glutathione transferase	CP074545.1	4730674	4731093
GCA_027595705.1	GCA_027595705.1_05091	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	298	300	99.33	93.96	298	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP074545.1	5213067	5213963
GCA_003598195.1	GCA_003598195.1_00145	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	100.00	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	PTQV01000011.1	58969	60102
GCA_902385805.1	GCA_902385805.1_00364	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CABMGS010000016.1	29090	29821
GCA_902385805.1	GCA_902385805.1_01128	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	495	492	100.00	91.67	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CABMGS010000042.1	42602	44089
GCA_000260655.1	GCA_000260655.1_01600	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	AJMT01000136.1	17737	19116
GCA_024668805.2	GCA_024668805.2_00148	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP102571.2	124761	125258
GCA_024668805.2	GCA_024668805.2_00658	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102571.2	660414	661706
GCA_024668805.2	GCA_024668805.2_00740	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102571.2	736459	737751
GCA_024668805.2	GCA_024668805.2_00741	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP102571.2	737769	738161
GCA_024668805.2	GCA_024668805.2_00762	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102571.2	758003	759292
GCA_024668805.2	GCA_024668805.2_00763	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP102571.2	759310	759711
GCA_024668805.2	GCA_024668805.2_00809	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP102571.2	799264	801270
GCA_024668805.2	GCA_024668805.2_00929	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP102571.2	916403	917842
GCA_024668805.2	GCA_024668805.2_00934	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.22	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP102571.2	921021	921866
GCA_024668805.2	GCA_024668805.2_00935	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.97	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP102571.2	921973	923730
GCA_024668805.2	GCA_024668805.2_00936	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP102571.2	923720	924100
GCA_024668805.2	GCA_024668805.2_01773	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP102571.2	1704502	1705296
GCA_024668805.2	GCA_024668805.2_02697	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP102572.2	1738	2379
GCA_024668805.2	GCA_024668805.2_02702	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	1024	1024	100.00	99.90	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP102572.2	6123	9197
GCA_024668805.2	GCA_024668805.2_02718	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	PARTIALP	438	514	83.85	99.30	431	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP102572.2	23974	25290
GCA_024668805.2	GCA_024668805.2_02719	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP102572.2	25702	26262
GCA_024668805.2	GCA_024668805.2_02727	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	244	244	100.00	99.18	244	WP_014158490.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP102572.2	33092	33826
GCA_024668805.2	GCA_024668805.2_02728	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP102572.2	34132	35508
GCA_024668805.2	GCA_024668805.2_02729	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP102572.2	35868	36611
GCA_024668805.2	GCA_024668805.2_02730	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP102572.2	36834	37232
GCA_024759265.1	GCA_024759265.1_00921	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103214.1	1049442	1051367
GCA_024759265.1	GCA_024759265.1_02634	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.33	76.12	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103214.1	3231864	3232745
GCA_024759265.1	GCA_024759265.1_03713	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	45.63	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP103214.1	4538311	4538637
GCA_024759265.1	GCA_024759265.1_03965	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	443	443	100.00	100.00	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103214.1	4810105	4811436
GCA_022811505.1	GCA_022811505.1_00067	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP063753.1	64259	65548
GCA_022811505.1	GCA_022811505.1_00070	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP063753.1	66845	68851
GCA_022811505.1	GCA_022811505.1_00089	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP063753.1	84621	85022
GCA_022811505.1	GCA_022811505.1_00175	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP063753.1	160817	162109
GCA_022811505.1	GCA_022811505.1_01200	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP063753.1	1160976	1161473
GCA_022811505.1	GCA_022811505.1_01692	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP063753.1	1655009	1656448
GCA_022811505.1	GCA_022811505.1_02284	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP063753.1	2244189	2245628
GCA_022811505.1	GCA_022811505.1_02289	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP063753.1	2249253	2250719
GCA_022811505.1	GCA_022811505.1_02290	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP063753.1	2250818	2251717
GCA_022811505.1	GCA_022811505.1_02501	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	CP063753.1	2469820	2470143
GCA_022811505.1	GCA_022811505.1_02503	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP063753.1	2471390	2472235
GCA_022811505.1	GCA_022811505.1_02504	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP063753.1	2472342	2474099
GCA_022811505.1	GCA_022811505.1_02505	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP063753.1	2474089	2474469
GCA_025144305.1	GCA_025144305.1_00987	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JALXXF010000018.1	829	1683
GCA_030844975.1	GCA_030844975.1_02201	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.30	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNMK010000001.1	2287941	2288795
GCA_030844975.1	GCA_030844975.1_02207	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASNMK010000001.1	2293782	2295563
GCA_030844975.1	GCA_030844975.1_02214	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASNMK010000001.1	2300981	2302900
GCA_000024585.1	GCA_000024585.1_00102	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP001781.1	114177	115535
GCA_000024585.1	GCA_000024585.1_00301	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP001781.1	343141	344496
GCA_000024585.1	GCA_000024585.1_00338	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP001781.1	377804	378415
GCA_000024585.1	GCA_000024585.1_01796	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP001781.1	1853741	1855033
GCA_000024585.1	GCA_000024585.1_01834	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	CP001781.1	1886167	1886889
GCA_000024585.1	GCA_000024585.1_01835	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP001781.1	1887014	1887721
GCA_000024585.1	GCA_000024585.1_01840	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP001781.1	1891852	1892835
GCA_000024585.1	GCA_000024585.1_01841	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP001781.1	1892837	1893772
GCA_000024585.1	GCA_000024585.1_01849	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP001781.1	1899974	1900729
GCA_000024585.1	GCA_000024585.1_01850	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP001781.1	1900768	1901163
GCA_000024585.1	GCA_000024585.1_01852	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP001781.1	1901693	1902421
GCA_000024585.1	GCA_000024585.1_01853	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP001781.1	1902456	1903175
GCA_000024585.1	GCA_000024585.1_01854	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP001781.1	1903456	1904220
GCA_000024585.1	GCA_000024585.1_02105	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP001781.1	2101814	2101948
GCA_000024585.1	GCA_000024585.1_02250	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP001781.1	2253668	2255110
GCA_000024585.1	GCA_000024585.1_02423	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP001781.1	2405878	2406297
GCA_000024585.1	GCA_000024585.1_02507	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP001781.1	2494630	2495595
GCA_000024585.1	GCA_000024585.1_02508	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP001781.1	2496162	2497109
GCA_000024585.1	GCA_000024585.1_02509	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP001781.1	2497111	2498088
GCA_000024585.1	GCA_000024585.1_02734	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP001781.1	2736027	2737556
GCA_000024585.1	GCA_000024585.1_02771	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP001781.1	2782448	2783500
GCA_000024585.1	GCA_000024585.1_02841	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP001783.1	2918	4297
GCA_003351705.1	GCA_003351705.1_00427	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP031248.1	404977	406896
GCA_003351705.1	GCA_003351705.1_00550	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP031248.1	524396	524824
GCA_003351705.1	GCA_003351705.1_00626	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP031248.1	590953	592152
GCA_024295585.1	GCA_024295585.1_00205	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOL010000001.1	191440	191868
GCA_024295585.1	GCA_024295585.1_00210	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOL010000001.1	193609	195072
GCA_024295585.1	GCA_024295585.1_00211	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOL010000001.1	195192	196409
GCA_024295585.1	GCA_024295585.1_00879	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCOL010000002.1	302711	304606
GCA_024295585.1	GCA_024295585.1_01090	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCOL010000003.1	158289	160013
GCA_024295585.1	GCA_024295585.1_01091	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCOL010000003.1	160015	161751
GCA_024295585.1	GCA_024295585.1_01408	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCOL010000004.1	180663	182582
GCA_016791565.1	GCA_016791565.1_00645	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	356	350	100.00	74.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAENGV010000001.1	516594	517664
GCA_000281175.1	GCA_000281175.1_01439	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	145	164	84.15	51.43	140	ABU58394.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	AP012337.1	1750150	1750587
GCA_019929325.1	GCA_019929325.1_01100	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAHZPI010000002.1	281094	283013
GCA_019929325.1	GCA_019929325.1_01301	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.40	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHZPI010000003.1	79826	81721
GCA_030503715.1	GCA_030503715.1_01316	srtB	class B sortase SrtB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	329	329	99.39	93.27	327	CAE48738.1	class B sortase SrtB	NA	NA	CP073093.1	1348433	1349422
GCA_030503715.1	GCA_030503715.1_01409	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073093.1	1435039	1436481
GCA_002214645.1	GCA_002214645.1_01316	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	263	302	85.43	62.21	262	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP016278.1	1411479	1412270
GCA_022846495.1	GCA_022846495.1_02547	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	AP025555.1	11097	11951
GCA_000162915.1	GCA_000162915.1_02686	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	GG703883.1	673211	675136
GCA_022341345.1	GCA_022341345.1_01395	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	JAEOBJ010000005.1	102906	103847
GCA_021532155.1	GCA_021532155.1_00274	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JADYUW010000014.1	274	2199
GCA_905372545.1	GCA_905372545.1_00085	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	88.41	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAJPPI010000001.1	95542	97020
GCA_905372545.1	GCA_905372545.1_01155	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.51	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAJPPI010000006.1	78906	80285
GCA_900099625.1	GCA_900099625.1_01165	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	131	121	100.00	50.37	135	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	FMTF01000002.1	187619	188014
GCA_001053915.1	GCA_001053915.1_00780	tet(B)	tetracycline efflux MFS transporter Tet(B)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	401	401	100.00	100.00	401	WP_001089068.1	tetracycline efflux MFS transporter Tet(B)	NF012190.1	tetracycline efflux MFS transporter Tet(B)	JWCE01000036.1	4222	5427
GCA_000262545.1	GCA_000262545.1_00946	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JH660660.1	520263	522188
GCA_000262545.1	GCA_000262545.1_01682	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JH660660.1	1359001	1359966
GCA_000016485.1	GCA_000016485.1_02038	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.77	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP000672.1	1856740	1858134
GCA_030148125.1	GCA_030148125.1_03310	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JASBUB010000211.1	907	1182
GCA_030148125.1	GCA_030148125.1_03311	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	JASBUB010000211.1	1195	1545
GCA_002578765.1	GCA_002578765.1_00346	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NBIS01000008.1	42338	42748
GCA_018919345.1	GCA_018919345.1_00093	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHLLZ010000011.1	2520	3944
GCA_018919345.1	GCA_018919345.1_00097	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAHLLZ010000011.1	5666	6520
GCA_018919345.1	GCA_018919345.1_00825	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAHLLZ010000029.1	94	909
GCA_018919345.1	GCA_018919345.1_01745	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAHLLZ010000005.1	227614	228789
GCA_018919345.1	GCA_018919345.1_01747	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAHLLZ010000005.1	228993	229829
GCA_018919345.1	GCA_018919345.1_01748	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	205	267	76.78	99.51	205	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	JAHLLZ010000005.1	229829	230446
GCA_000258405.1	GCA_000258405.1_00104	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	115	137	73.72	60.40	101	WP_012695486.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP003418.1	105287	105634
GCA_000258405.1	GCA_000258405.1_01955	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	568	97.18	50.91	552	ADP02162.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP003418.1	2235263	2236906
GCA_002138415.1	GCA_002138415.1_01383	emrC	multidrug efflux transporter outer membrane subunit EmrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	497	497	100.00	97.79	497	CAQ45062.1	multidrug efflux transporter outer membrane subunit EmrC	NA	NA	CP015612.1	1492621	1494114
GCA_002138415.1	GCA_002138415.1_01384	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	392	393	100.00	98.73	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	CP015612.1	1494126	1495304
GCA_002138415.1	GCA_002138415.1_01385	emrB	multidrug efflux MFS transporter permease subunit EmrB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	525	528	100.00	98.67	528	CAQ45064.1	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	CP015612.1	1495312	1496889
GCA_002138415.1	GCA_002138415.1_01835	aph(3)-IIc	aminoglycoside O-phosphotransferase APH(3)-IIc	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	BLASTP	267	267	100.00	92.51	267	WP_012479999.1	aminoglycoside O-phosphotransferase APH(3)-IIc	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP015612.1	1952510	1953313
GCA_002138415.1	GCA_002138415.1_02048	aph(6)	APH(6) family putative aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	BLASTP	270	270	99.63	91.08	269	WP_012480135.1	APH(6) family putative aminoglycoside O-phosphotransferase	NF012160.0	APH(6) family putative aminoglycoside O-phosphotransferase	CP015612.1	2198130	2198942
GCA_002138415.1	GCA_002138415.1_02290	blaL1	L1 family subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	HMM	290	290	100.00	88.28	290	WP_063842688.1	L1 family subclass B3 metallo-beta-lactamase	NF033106.1	L1 family subclass B3 metallo-beta-lactamase	CP015612.1	2457743	2458615
GCA_002138415.1	GCA_002138415.1_03322	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	303	304	100.00	70.39	304	WP_063842700.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP015612.1	3573497	3574408
GCA_002138415.1	GCA_002138415.1_03672	smeF	multidrug efflux RND transporter outer membrane subunit SmeF	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	461	466	98.93	98.05	461	CAC14596.1	multidrug efflux RND transporter outer membrane subunit SmeF	NA	NA	CP015612.1	3977367	3978752
GCA_002138415.1	GCA_002138415.1_03760	cml	CmlA/FloR family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	395	411	95.13	59.85	391	WP_011552636.1	CmlA/FloR family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP015612.1	4072855	4074042
GCA_002138415.1	GCA_002138415.1_04006	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	144	150	85.33	55.47	128	WP_000237816.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP015612.1	4326295	4326729
GCA_005937655.1	GCA_005937655.1_01956	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	QJIA01000008.1	10780	11190
GCA_000381525.1	GCA_000381525.1_01727	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.85	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KB906639.1	15275	16753
GCA_902859025.1	GCA_902859025.1_01096	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	LR793271.1	1112832	1114049
GCA_902859025.1	GCA_902859025.1_01097	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	LR793271.1	1114169	1115632
GCA_001697485.1	GCA_001697485.1_00171	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016653.1	155895	157274
GCA_001697485.1	GCA_001697485.1_00881	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016653.1	898610	899515
GCA_001697485.1	GCA_001697485.1_01005	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016653.1	1033902	1035140
GCA_001697485.1	GCA_001697485.1_01006	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016653.1	1035548	1036180
GCA_001697485.1	GCA_001697485.1_01008	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016653.1	1037005	1038573
GCA_001697485.1	GCA_001697485.1_01208	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016653.1	1248236	1249762
GCA_963394895.1	GCA_963394895.1_00734	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJPR010000007.1	23179	24084
GCA_963394895.1	GCA_963394895.1_00815	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	95.47	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPR010000008.1	18664	20190
GCA_963394895.1	GCA_963394895.1_01606	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPR010000028.1	6950	8188
GCA_963394895.1	GCA_963394895.1_01607	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	98.57	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJPR010000028.1	8436	9068
GCA_938042185.1	GCA_938042185.1_00531	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	107	97.20	44.23	104	KAA9473340.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CALIRV010000029.1	1741	2067
GCA_938042185.1	GCA_938042185.1_01092	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CALIRV010000050.1	104422	105612
GCA_938042185.1	GCA_938042185.1_02216	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CALIRV010000097.1	2192	2992
GCA_938042185.1	GCA_938042185.1_02308	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CALIRV010000101.1	17068	18993
GCA_003812505.1	GCA_003812505.1_00916	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP033732.1	900837	902126
GCA_003812505.1	GCA_003812505.1_00919	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP033732.1	904294	904641
GCA_003812505.1	GCA_003812505.1_02297	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP033733.1	10	1389
GCA_018366295.1	GCA_018366295.1_00719	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAGZIJ010000011.1	33649	35289
GCA_015700065.1	GCA_015700065.1_02307	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	99.73	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JACSYQ010000009.1	50244	51377
GCA_013394695.1	GCA_013394695.1_00967	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP058258.1	959126	960589
GCA_013394695.1	GCA_013394695.1_00968	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP058258.1	960709	961926
GCA_024295945.1	GCA_024295945.1_00635	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JANCPE010000002.1	23487	25406
GCA_024295945.1	GCA_024295945.1_01506	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	89.44	61.42	127	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPE010000006.1	14011	14439
GCA_024295945.1	GCA_024295945.1_01511	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCPE010000006.1	17410	18627
GCA_024295945.1	GCA_024295945.1_01512	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCPE010000006.1	18747	20210
GCA_024295945.1	GCA_024295945.1_01517	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCPE010000006.1	22160	22588
GCA_023668195.1	GCA_023668195.1_00679	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	285	266	100.00	100.00	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAMOWN010000017.1	41202	42059
GCA_023668195.1	GCA_023668195.1_00680	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	378	388	97.42	99.74	378	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	JAMOWN010000017.1	42272	43408
GCA_023668195.1	GCA_023668195.1_03747	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	319	300	89.33	53.73	268	WP_032579291.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAMOWN010000008.1	82527	83486
GCA_024539755.1	GCA_024539755.1_01828	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	98.99	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JAFJMB010000059.1	136	1917
GCA_024539755.1	GCA_024539755.1_01941	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JAFJMB010000069.1	1340	2143
GCA_024539755.1	GCA_024539755.1_01942	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAFJMB010000069.1	2143	2979
GCA_024539755.1	GCA_024539755.1_01944	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAFJMB010000069.1	3334	4509
GCA_024539755.1	GCA_024539755.1_02059	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAFJMB010000073.1	262	1116
GCA_024539755.1	GCA_024539755.1_02064	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAFJMB010000076.1	238	1053
GCA_024539755.1	GCA_024539755.1_02136	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.55	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFJMB010000008.1	69671	71092
GCA_900458815.1	GCA_900458815.1_00291	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	356	350	100.00	74.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	UHDZ01000001.1	235577	236647
GCA_027663745.1	GCA_027663745.1_01897	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAQDHK010000009.1	41748	42176
GCA_004291115.2	GCA_004291115.2_00268	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	356	350	100.00	74.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP068029.1	235545	236615
GCA_900478255.1	GCA_900478255.1_00024	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	LS483482.1	26864	27937
GCA_900478255.1	GCA_900478255.1_00165	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	LS483482.1	179004	180296
GCA_900478255.1	GCA_900478255.1_02037	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	LS483482.1	2060057	2060476
GCA_024204705.1	GCA_024204705.1_00034	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP093165.1	37593	39599
GCA_024204705.1	GCA_024204705.1_00035	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP093165.1	39699	40685
GCA_024204705.1	GCA_024204705.1_00056	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP093165.1	58944	60233
GCA_024204705.1	GCA_024204705.1_00059	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP093165.1	62411	62758
GCA_024204705.1	GCA_024204705.1_00133	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP093165.1	149515	149943
GCA_024204705.1	GCA_024204705.1_00865	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093165.1	894830	895675
GCA_024204705.1	GCA_024204705.1_00866	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093165.1	895782	897539
GCA_024204705.1	GCA_024204705.1_00867	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093165.1	897529	897909
GCA_024204705.1	GCA_024204705.1_02350	fosD	fosfomycin resistance bacillithiol transferase FosD	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000616116.1	fosfomycin resistance bacillithiol transferase FosD	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP093166.1	80	499
GCA_024204705.1	GCA_024204705.1_02393	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	CP093169.1	368	691
GCA_901875325.1	GCA_901875325.1_01590	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	CABFLZ010000047.1	11344	12180
GCA_901875325.1	GCA_901875325.1_01591	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	CABFLZ010000047.1	12180	12983
GCA_901875325.1	GCA_901875325.1_01592	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CABFLZ010000047.1	13044	13859
GCA_030176025.1	GCA_030176025.1_00554	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVK010000019.1	808	1662
GCA_030176025.1	GCA_030176025.1_01867	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.57	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASNVK010000005.1	85047	86489
GCA_028609825.1	GCA_028609825.1_00595	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.55	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP063190.1	596490	597914
GCA_028609825.1	GCA_028609825.1_01163	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	479	513	93.37	92.48	479	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	CP063190.1	1173011	1174450
GCA_943914145.1	GCA_943914145.1_01684	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	105	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CALUAX010000004.1	148066	148383
GCA_943914145.1	GCA_943914145.1_01685	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CALUAX010000004.1	148380	149669
GCA_943914145.1	GCA_943914145.1_01686	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	99.24	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CALUAX010000004.1	149687	150082
GCA_003044445.1	GCA_003044445.1_00918	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	POWX01000006.1	37638	39017
GCA_029918605.1	GCA_029918605.1_01953	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JARDCD010000006.1	29718	31010
GCA_002073515.2	GCA_002073515.2_00055	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	632	639	100.00	97.97	639	WP_063856111.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP020438.2	50286	52184
GCA_002073515.2	GCA_002073515.2_00056	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP020438.2	53291	54028
GCA_001073715.1	GCA_001073715.1_00331	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JUYU01000015.1	65839	66912
GCA_001073715.1	GCA_001073715.1_00355	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JUYU01000016.1	3822	4226
GCA_001073715.1	GCA_001073715.1_00356	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JUYU01000016.1	4443	5186
GCA_001073715.1	GCA_001073715.1_00787	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JUYU01000023.1	60403	61692
GCA_001073715.1	GCA_001073715.1_01333	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JUYU01000029.1	5374	5745
GCA_001073715.1	GCA_001073715.1_01334	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JUYU01000029.1	5745	7502
GCA_001073715.1	GCA_001073715.1_01335	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JUYU01000029.1	7602	9608
GCA_001073715.1	GCA_001073715.1_01636	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JUYU01000035.1	1404	2843
GCA_001073715.1	GCA_001073715.1_01791	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JUYU01000037.1	9899	10279
GCA_001073715.1	GCA_001073715.1_01792	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JUYU01000037.1	10269	12026
GCA_001073715.1	GCA_001073715.1_01793	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JUYU01000037.1	12133	12978
GCA_001073715.1	GCA_001073715.1_02453	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JUYU01000007.1	1427	2158
GCA_001073715.1	GCA_001073715.1_02454	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	JUYU01000007.1	2284	3066
GCA_002901705.1	GCA_002901705.1_00995	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	PPPV01000012.1	985484	985903
GCA_002901705.1	GCA_002901705.1_02090	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPPV01000016.1	718690	719982
GCA_002901705.1	GCA_002901705.1_02231	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	53.89	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	PPPV01000016.1	871017	872090
GCA_019329745.1	GCA_019329745.1_00122	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073865.1	99671	100018
GCA_019329745.1	GCA_019329745.1_00125	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073865.1	102187	103485
GCA_019329745.1	GCA_019329745.1_00135	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073865.1	112271	112921
GCA_019329745.1	GCA_019329745.1_00136	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073865.1	113003	114646
GCA_019329745.1	GCA_019329745.1_00137	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073865.1	114704	115042
GCA_019329745.1	GCA_019329745.1_00183	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073865.1	154008	154379
GCA_019329745.1	GCA_019329745.1_00184	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073865.1	154379	156136
GCA_019329745.1	GCA_019329745.1_00185	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073865.1	156236	158242
GCA_019329745.1	GCA_019329745.1_01100	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073865.1	1053684	1054169
GCA_019329745.1	GCA_019329745.1_01103	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073865.1	1055925	1057364
GCA_019329745.1	GCA_019329745.1_01225	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073865.1	1134324	1134965
GCA_019329745.1	GCA_019329745.1_01246	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073865.1	1153785	1154630
GCA_019329745.1	GCA_019329745.1_01247	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073865.1	1154737	1156494
GCA_019329745.1	GCA_019329745.1_01248	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073865.1	1156484	1156864
GCA_019329745.1	GCA_019329745.1_02738	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073865.1	2673276	2674343
GCA_019329745.1	GCA_019329745.1_02789	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073865.1	2732141	2732377
GCA_019329745.1	GCA_019329745.1_02878	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073866.1	4422	5966
GCA_019329745.1	GCA_019329745.1_02879	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073866.1	6151	6711
GCA_007666555.1	GCA_007666555.1_00709	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.19	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VDPI01000019.1	9032	10456
GCA_007666555.1	GCA_007666555.1_01016	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	VDPI01000001.1	267879	268325
GCA_007666555.1	GCA_007666555.1_01435	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VDPI01000002.1	92082	92936
GCA_030219045.1	GCA_030219045.1_00522	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.44	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JASORA010000018.1	48563	48973
GCA_030219045.1	GCA_030219045.1_01101	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASORA010000027.1	753	1607
GCA_030440175.1	GCA_030440175.1_01998	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQFJQ010000009.1	38277	39494
GCA_030440175.1	GCA_030440175.1_01999	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQFJQ010000009.1	39614	41077
GCA_030440175.1	GCA_030440175.1_02004	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.37	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQFJQ010000009.1	42803	44722
GCA_022485685.1	GCA_022485685.1_00004	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFH010000010.1	3461	4753
GCA_022485685.1	GCA_022485685.1_00080	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	95.10	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKVFH010000010.1	74474	75766
GCA_022485685.1	GCA_022485685.1_00081	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKVFH010000010.1	75784	76185
GCA_022485685.1	GCA_022485685.1_01111	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKVFH010000023.1	495	1961
GCA_022485685.1	GCA_022485685.1_01112	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAKVFH010000023.1	2060	2959
GCA_022485685.1	GCA_022485685.1_01114	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAKVFH010000023.1	4258	4818
GCA_022485685.1	GCA_022485685.1_01115	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAKVFH010000023.1	5002	6546
GCA_025151505.1	GCA_025151505.1_00495	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.69	41.40	471	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXUV010000132.1	532	1926
GCA_001053555.1	GCA_001053555.1_02112	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JVSN01000035.1	50421	51275
GCA_024181125.1	GCA_024181125.1_02053	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	93.21	65.53	206	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP051153.1	2212877	2213524
GCA_001697845.1	GCA_001697845.1_00378	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016671.1	373475	374854
GCA_001697845.1	GCA_001697845.1_01126	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016671.1	1135847	1136752
GCA_001697845.1	GCA_001697845.1_01246	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016671.1	1272063	1273301
GCA_001697845.1	GCA_001697845.1_01247	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016671.1	1273705	1274337
GCA_001697845.1	GCA_001697845.1_01249	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016671.1	1275162	1276730
GCA_001697845.1	GCA_001697845.1_01442	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.82	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016671.1	1478225	1479751
GCA_001553145.1	GCA_001553145.1_00584	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	KQ960273.1	4362	5093
GCA_001553145.1	GCA_001553145.1_00735	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KQ960280.1	4655	6574
GCA_020702615.2	GCA_020702615.2_00022	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP099495.1	20413	20904
GCA_020702615.2	GCA_020702615.2_00027	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP099495.1	23118	23468
GCA_020702615.2	GCA_020702615.2_00227	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP099495.1	181777	183069
GCA_020702615.2	GCA_020702615.2_00393	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	279	250	100.00	96.00	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP099495.1	372910	373749
GCA_020702615.2	GCA_020702615.2_01589	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.67	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP099495.1	1607496	1608851
GCA_020702615.2	GCA_020702615.2_01784	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP099495.1	1835312	1836670
GCA_020702615.2	GCA_020702615.2_01848	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP099495.1	1904658	1906664
GCA_020702615.2	GCA_020702615.2_01915	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.72	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP099495.1	1972998	1976549
GCA_020702615.2	GCA_020702615.2_01935	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	98.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP099495.1	1994531	1995583
GCA_020702615.2	GCA_020702615.2_01971	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.71	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP099495.1	2042280	2043809
GCA_020702615.2	GCA_020702615.2_02187	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP099495.1	2274130	2275107
GCA_020702615.2	GCA_020702615.2_02188	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP099495.1	2275109	2276056
GCA_020702615.2	GCA_020702615.2_02189	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP099495.1	2276624	2277589
GCA_020702615.2	GCA_020702615.2_02446	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP099495.1	2515461	2516903
GCA_020702615.2	GCA_020702615.2_02612	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP099495.1	2681801	2681935
GCA_020702615.2	GCA_020702615.2_02666	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP099496.1	644	1039
GCA_020702615.2	GCA_020702615.2_02667	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.77	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP099496.1	1057	2346
GCA_020702615.2	GCA_020702615.2_02668	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP099496.1	2346	2660
GCA_020702615.2	GCA_020702615.2_02672	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP099496.1	5743	6123
GCA_020702615.2	GCA_020702615.2_02673	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	95.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP099496.1	6113	7870
GCA_020702615.2	GCA_020702615.2_02674	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733285.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP099496.1	7977	8822
GCA_020702615.2	GCA_020702615.2_02679	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP099496.1	11649	12266
GCA_025558645.1	GCA_025558645.1_00075	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.57	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP094726.1	91632	92699
GCA_025558645.1	GCA_025558645.1_00122	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP094726.1	149194	149622
GCA_025558645.1	GCA_025558645.1_00194	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP094726.1	230595	230942
GCA_025558645.1	GCA_025558645.1_00197	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094726.1	233119	234408
GCA_025558645.1	GCA_025558645.1_00918	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP094726.1	948565	949410
GCA_025558645.1	GCA_025558645.1_00919	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP094726.1	949517	951274
GCA_025558645.1	GCA_025558645.1_00920	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP094726.1	951264	951644
GCA_025558645.1	GCA_025558645.1_02410	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP094727.1	2355	3734
GCA_001544235.1	GCA_001544235.1_00752	lsa(A)	ABC-F type ribosomal protection protein Lsa(A)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	EXACTP	498	498	100.00	100.00	498	WP_002411322.1	ABC-F type ribosomal protection protein Lsa(A)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	BCQC01000002.1	280784	282280
GCA_001544235.1	GCA_001544235.1_02802	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	98.86	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	BCQC01000022.1	1510	3624
GCA_003989155.1	GCA_003989155.1_01578	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	RBMG01000002.1	425178	426818
GCA_018127885.1	GCA_018127885.1_00128	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072343.1	166466	167656
GCA_018127885.1	GCA_018127885.1_02503	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP072344.1	1250207	1251172
GCA_001061655.1	GCA_001061655.1_01596	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVST01000035.1	212575	214215
GCA_009378085.1	GCA_009378085.1_01368	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	NXCE01000007.1	57218	58159
GCA_009496075.1	GCA_009496075.1_01635	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJE01000006.1	109469	110668
GCA_000183605.2	GCA_000183605.2_00458	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	AENO01000046.1	22709	24634
GCA_000183605.2	GCA_000183605.2_00529	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_063844771.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	AENO01000045.1	38862	39662
GCA_001074345.1	GCA_001074345.1_00643	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JUTP01000058.1	32003	32431
GCA_001074345.1	GCA_001074345.1_01909	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JUTP01000146.1	69184	71103
GCA_001815315.1	GCA_001815315.1_01917	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	KV820239.1	21308	23233
GCA_019929505.1	GCA_019929505.1_00224	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAHZPR010000001.1	239457	241115
GCA_019929505.1	GCA_019929505.1_00840	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JAHZPR010000002.1	324539	325738
GCA_024758905.1	GCA_024758905.1_01987	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.84	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103077.1	2613395	2615320
GCA_024758905.1	GCA_024758905.1_02880	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	99.77	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103077.1	3674222	3675553
GCA_024758905.1	GCA_024758905.1_03151	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	108	121	83.47	45.63	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP103077.1	3977969	3978295
GCA_024758905.1	GCA_024758905.1_04248	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.33	76.12	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP103077.1	5351808	5352689
GCA_000931605.1	GCA_000931605.1_01512	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP007471.1	1536323	1537717
GCA_030229305.1	GCA_030229305.1_00883	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPIJ010000021.1	787	1638
GCA_030229305.1	GCA_030229305.1_01452	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPIJ010000003.1	260956	261810
GCA_024295765.1	GCA_024295765.1_00210	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOQ010000001.1	205641	206858
GCA_024295765.1	GCA_024295765.1_00211	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOQ010000001.1	206978	208441
GCA_024295765.1	GCA_024295765.1_00216	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOQ010000001.1	210182	210610
GCA_024295765.1	GCA_024295765.1_01218	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCOQ010000003.1	180663	182582
GCA_024295765.1	GCA_024295765.1_01490	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCOQ010000004.1	224935	226830
GCA_024295765.1	GCA_024295765.1_01572	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCOQ010000005.1	64686	66410
GCA_024295765.1	GCA_024295765.1_01573	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCOQ010000005.1	66412	68148
GCA_000165525.1	GCA_000165525.1_00585	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP002277.1	571038	571898
GCA_000165525.1	GCA_000165525.1_01170	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP002277.1	1163265	1164659
GCA_905371915.1	GCA_905371915.1_01601	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	129	120	99.17	39.53	129	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAJPMV010000039.1	3182	3571
GCA_023148985.1	GCA_023148985.1_01041	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.74	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHXNB010000012.1	4933	6225
GCA_023148985.1	GCA_023148985.1_01042	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHXNB010000012.1	6242	6637
GCA_023148985.1	GCA_023148985.1_01914	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.92	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHXNB010000004.1	60522	61811
GCA_023148985.1	GCA_023148985.1_02432	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	96.15	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JAHXNB010000009.1	244	558
GCA_023148985.1	GCA_023148985.1_02433	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHXNB010000009.1	558	1847
GCA_023148985.1	GCA_023148985.1_02434	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAHXNB010000009.1	1865	2266
GCA_023109405.1	GCA_023109405.1_00651	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDUJ010000001.1	586646	587863
GCA_023109405.1	GCA_023109405.1_00652	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDUJ010000001.1	587983	589446
GCA_023109405.1	GCA_023109405.1_01609	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	92.93	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALDUJ010000002.1	85894	87552
GCA_001807215.1	GCA_001807215.1_00424	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	KV788296.1	7432	7878
GCA_001807215.1	GCA_001807215.1_00426	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV788296.1	8680	9534
GCA_001807215.1	GCA_001807215.1_01852	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV788341.1	2264	4045
GCA_001807215.1	GCA_001807215.1_02373	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV788357.1	542	1984
GCA_020404185.1	GCA_020404185.1_01721	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAIZBZ010000007.1	72209	74128
GCA_002285115.1	GCA_002285115.1_01135	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	86.70	45.64	195	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	NSGP01000020.1	2816	3469
GCA_002285115.1	GCA_002285115.1_01136	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.04	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NSGP01000020.1	3504	4928
GCA_000239235.1	GCA_000239235.1_00035	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP003194.1	39686	41692
GCA_000239235.1	GCA_000239235.1_00036	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP003194.1	41792	42778
GCA_000239235.1	GCA_000239235.1_00046	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP003194.1	49425	49805
GCA_000239235.1	GCA_000239235.1_00047	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP003194.1	49795	51552
GCA_000239235.1	GCA_000239235.1_00048	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP003194.1	51659	52504
GCA_000239235.1	GCA_000239235.1_00049	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP003194.1	53170	54069
GCA_000239235.1	GCA_000239235.1_00050	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP003194.1	54168	55634
GCA_000239235.1	GCA_000239235.1_00064	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	176	180	100.00	97.78	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP003194.1	66427	66957
GCA_000239235.1	GCA_000239235.1_00065	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP003194.1	67050	67844
GCA_000239235.1	GCA_000239235.1_00130	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP003194.1	144844	146202
GCA_000239235.1	GCA_000239235.1_00327	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.56	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP003194.1	371829	373184
GCA_000239235.1	GCA_000239235.1_00363	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP003194.1	406444	407055
GCA_000239235.1	GCA_000239235.1_01488	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	98.77	325	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA	CP003194.1	1559368	1560345
GCA_000239235.1	GCA_000239235.1_01489	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA	CP003194.1	1560347	1561285
GCA_000239235.1	GCA_000239235.1_01663	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	94.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP003194.1	1707347	1708099
GCA_000239235.1	GCA_000239235.1_01828	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP003194.1	1897661	1898953
GCA_000239235.1	GCA_000239235.1_01867	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.17	240	ABD31003.1	serine protease SplB	NA	NA	CP003194.1	1930380	1931102
GCA_000239235.1	GCA_000239235.1_01868	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	98.72	235	ABD31004.1	serine protease SplA	NA	NA	CP003194.1	1931227	1931934
GCA_000239235.1	GCA_000239235.1_01878	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP003194.1	1943594	1944577
GCA_000239235.1	GCA_000239235.1_01879	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP003194.1	1944579	1945514
GCA_000239235.1	GCA_000239235.1_02035	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP003194.1	2072409	2072759
GCA_000239235.1	GCA_000239235.1_02039	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	CP003194.1	2074256	2074747
GCA_000239235.1	GCA_000239235.1_02111	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP003194.1	2128835	2128969
GCA_000239235.1	GCA_000239235.1_02260	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.38	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP003194.1	2281118	2282560
GCA_000239235.1	GCA_000239235.1_02302	ednB	epidermal cell differentiation inhibitor EdnB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	247	251	98.41	100.00	247	AXN77488.1	epidermal cell differentiation inhibitor EdnB	NA	NA	CP003194.1	2325567	2326310
GCA_000239235.1	GCA_000239235.1_02513	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP003194.1	2521227	2522192
GCA_000239235.1	GCA_000239235.1_02514	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP003194.1	2522760	2523707
GCA_000239235.1	GCA_000239235.1_02515	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP003194.1	2523709	2524686
GCA_000239235.1	GCA_000239235.1_02643	sey	staphylococcal enterotoxin type Y	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	221	221	100.00	99.10	221	BAS21358.1	staphylococcal enterotoxin type Y	NA	NA	CP003194.1	2658803	2659468
GCA_000239235.1	GCA_000239235.1_02734	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP003194.1	2759813	2761342
GCA_000239235.1	GCA_000239235.1_02768	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.71	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP003194.1	2804428	2805480
GCA_000239235.1	GCA_000239235.1_02812	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP003193.1	1336	1977
GCA_000239235.1	GCA_000239235.1_02815	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP003193.1	3371	4216
GCA_000239235.1	GCA_000239235.1_02816	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP003193.1	4323	6080
GCA_000239235.1	GCA_000239235.1_02817	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP003193.1	6070	6450
GCA_000239235.1	GCA_000239235.1_02820	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	PARTIALP	88	122	72.13	98.86	88	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	CP003193.1	8400	8666
GCA_000160755.1	GCA_000160755.1_01176	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	92.19	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	GG668579.1	150751	151329
GCA_000160755.1	GCA_000160755.1_01180	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	194	194	100.00	99.48	194	AAD47284.1	tellurium resistance-associated protein TerZ	NA	NA	GG668579.1	154110	154694
GCA_000160755.1	GCA_000160755.1_01191	tet(J)	tetracycline efflux MFS transporter Tet(J)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	398	398	100.00	100.00	398	WP_004245621.1	tetracycline efflux MFS transporter Tet(J)	NF012194.0	tetracycline efflux MFS transporter Tet(J)	GG668579.1	163938	165134
GCA_000160755.1	GCA_000160755.1_02264	catA	type A-4 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	217	217	100.00	97.70	217	WP_063843208.1	type A-4 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	GG668577.1	220768	221421
GCA_022291215.1	GCA_022291215.1_00595	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAANHM010000001.1	631103	632395
GCA_022291215.1	GCA_022291215.1_01007	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	JAANHM010000001.1	1013535	1014020
GCA_022291215.1	GCA_022291215.1_02479	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAANHM010000008.1	4783	5577
GCA_022291215.1	GCA_022291215.1_02480	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAANHM010000008.1	5670	6212
GCA_022291215.1	GCA_022291215.1_02481	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JAANHM010000008.1	6209	7117
GCA_022291215.1	GCA_022291215.1_02482	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAANHM010000008.1	7422	8159
GCA_022291215.1	GCA_022291215.1_02491	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAANHM010000010.1	1454	1834
GCA_022291215.1	GCA_022291215.1_02492	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAANHM010000010.1	1824	3581
GCA_022291215.1	GCA_022291215.1_02493	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAANHM010000010.1	3688	4533
GCA_022291215.1	GCA_022291215.1_02503	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	459	459	100.00	99.78	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAANHM010000012.1	1110	2489
GCA_022291215.1	GCA_022291215.1_02511	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAANHM010000014.1	80	1519
GCA_022291215.1	GCA_022291215.1_02514	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JAANHM010000004.1	497	982
GCA_030144345.1	GCA_030144345.1_01160	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP126309.1	1330457	1331422
GCA_022695925.1	GCA_022695925.1_00037	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAKUUW010000001.1	38557	38958
GCA_022695925.1	GCA_022695925.1_00038	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKUUW010000001.1	38976	40265
GCA_022695925.1	GCA_022695925.1_00041	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JAKUUW010000001.1	41562	43568
GCA_022695925.1	GCA_022695925.1_00050	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKUUW010000001.1	51391	52683
GCA_022695925.1	GCA_022695925.1_00054	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAKUUW010000001.1	54848	55195
GCA_022695925.1	GCA_022695925.1_00065	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAKUUW010000001.1	66231	67670
GCA_022695925.1	GCA_022695925.1_00088	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAKUUW010000001.1	90575	91954
GCA_022695925.1	GCA_022695925.1_00175	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKUUW010000001.1	170155	171447
GCA_022695925.1	GCA_022695925.1_00222	str	streptomycin adenylyltransferase Str	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	282	282	100.00	100.00	282	WP_031916103.1	streptomycin adenylyltransferase Str	NF000062.1	streptomycin adenylyltransferase Str	JAKUUW010000001.1	222229	223077
GCA_022695925.1	GCA_022695925.1_00276	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	JAKUUW010000001.1	270070	270567
GCA_022695925.1	GCA_022695925.1_01697	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAKUUW010000001.1	1654371	1655810
GCA_022695925.1	GCA_022695925.1_02298	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JAKUUW010000001.1	2252536	2253975
GCA_022695925.1	GCA_022695925.1_02302	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JAKUUW010000001.1	2257534	2259000
GCA_022695925.1	GCA_022695925.1_02303	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JAKUUW010000001.1	2259099	2259998
GCA_022695925.1	GCA_022695925.1_02544	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAKUUW010000001.1	2488339	2489184
GCA_022695925.1	GCA_022695925.1_02545	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAKUUW010000001.1	2489291	2491048
GCA_022695925.1	GCA_022695925.1_02546	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAKUUW010000001.1	2491038	2491418
GCA_022695925.1	GCA_022695925.1_02552	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	JAKUUW010000001.1	2497976	2498299
GCA_022695925.1	GCA_022695925.1_02557	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JAKUUW010000001.1	2501925	2502467
GCA_022695925.1	GCA_022695925.1_02558	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAKUUW010000001.1	2502560	2503354
GCA_022695925.1	GCA_022695925.1_02629	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	1024	1024	100.00	99.80	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	JAKUUW010000002.1	14608	17682
GCA_022695925.1	GCA_022695925.1_02638	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAKUUW010000002.1	27614	28174
GCA_022695925.1	GCA_022695925.1_02639	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAKUUW010000002.1	28358	29902
GCA_022695925.1	GCA_022695925.1_02667	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JAKUUW010000005.1	124	858
GCA_027685345.1	GCA_027685345.1_01014	lnu(C)	lincosamide nucleotidyltransferase Lnu(C)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	164	164	100.00	98.17	164	WP_063851341.1	lincosamide nucleotidyltransferase Lnu(C)	NF000141.1	lincosamide nucleotidyltransferase Lnu(C)	JAQCUP010000003.1	65551	66045
GCA_002999155.1	GCA_002999155.1_02752	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.02	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP027238.1	2874985	2876385
GCA_002999155.1	GCA_002999155.1_03512	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP027240.1	25504	26904
GCA_900683725.1	GCA_900683725.1_00552	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	LR215978.1	602513	604438
GCA_900683725.1	GCA_900683725.1_02661	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	242	321	75.08	100.00	241	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF012099.1	class A beta-lactamase, subclass A2	LR215978.1	2899366	2900094
GCA_900683725.1	GCA_900683725.1_02806	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	LR215978.1	3075772	3076737
GCA_002357995.1	GCA_002357995.1_00935	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AP017971.1	885276	886475
GCA_002357995.1	GCA_002357995.1_01009	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	AP017971.1	952882	953310
GCA_002357995.1	GCA_002357995.1_01120	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	AP017971.1	1066334	1067071
GCA_002357995.1	GCA_002357995.1_01123	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	AP017971.1	1068979	1070196
GCA_002357995.1	GCA_002357995.1_01124	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	AP017971.1	1070316	1071779
GCA_002357995.1	GCA_002357995.1_01129	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	AP017971.1	1073505	1075424
GCA_019329565.1	GCA_019329565.1_00827	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073844.1	806311	806796
GCA_019329565.1	GCA_019329565.1_00830	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073844.1	808552	809991
GCA_019329565.1	GCA_019329565.1_00951	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073844.1	885619	886260
GCA_019329565.1	GCA_019329565.1_00972	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073844.1	905080	905925
GCA_019329565.1	GCA_019329565.1_00973	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073844.1	906032	907789
GCA_019329565.1	GCA_019329565.1_00974	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073844.1	907779	908159
GCA_019329565.1	GCA_019329565.1_02464	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073844.1	2423241	2424308
GCA_019329565.1	GCA_019329565.1_02515	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073844.1	2482106	2482342
GCA_019329565.1	GCA_019329565.1_02592	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073844.1	2564980	2565327
GCA_019329565.1	GCA_019329565.1_02595	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073844.1	2567496	2568794
GCA_019329565.1	GCA_019329565.1_02605	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073844.1	2577580	2578230
GCA_019329565.1	GCA_019329565.1_02606	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073844.1	2578312	2579955
GCA_019329565.1	GCA_019329565.1_02607	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073844.1	2580013	2580351
GCA_019329565.1	GCA_019329565.1_02653	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073844.1	2619317	2619688
GCA_019329565.1	GCA_019329565.1_02654	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073844.1	2619688	2621445
GCA_019329565.1	GCA_019329565.1_02655	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073844.1	2621545	2623551
GCA_019329565.1	GCA_019329565.1_02750	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.81	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP073846.1	4428	5972
GCA_019329565.1	GCA_019329565.1_02751	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073846.1	6157	6717
GCA_001810545.1	GCA_001810545.1_01683	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	KV801824.1	212333	213550
GCA_001810545.1	GCA_001810545.1_01684	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	KV801824.1	213670	215133
GCA_001810545.1	GCA_001810545.1_01689	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.06	639	WP_063856397.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV801824.1	216858	218777
GCA_024586465.1	GCA_024586465.1_00053	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JANASZ010000001.1	55148	56587
GCA_024586465.1	GCA_024586465.1_00068	fusC	fusidic acid resistance EF-G-binding protein FusC	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	ALLELEP	212	212	100.00	100.00	212	WP_001033157.1	fusidic acid resistance EF-G-binding protein FusC	NF000341.1	FusC family fusidic acid resistance EF-G-binding protein	JANASZ010000001.1	69986	70624
GCA_024586465.1	GCA_024586465.1_00083	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JANASZ010000001.1	86969	87340
GCA_024586465.1	GCA_024586465.1_00084	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JANASZ010000001.1	87340	89097
GCA_024586465.1	GCA_024586465.1_00085	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JANASZ010000001.1	89197	91203
GCA_024586465.1	GCA_024586465.1_00090	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JANASZ010000001.1	94513	95256
GCA_024586465.1	GCA_024586465.1_00091	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JANASZ010000001.1	95473	95877
GCA_024586465.1	GCA_024586465.1_02198	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JANASZ010000001.1	2097283	2097663
GCA_024586465.1	GCA_024586465.1_02199	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JANASZ010000001.1	2097653	2099410
GCA_024586465.1	GCA_024586465.1_02200	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JANASZ010000001.1	2099517	2100362
GCA_024586465.1	GCA_024586465.1_02307	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANASZ010000001.1	2204112	2205752
GCA_024586465.1	GCA_024586465.1_02386	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JANASZ010000001.1	2278762	2280054
GCA_024586465.1	GCA_024586465.1_02390	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JANASZ010000001.1	2283737	2284084
GCA_024586465.1	GCA_024586465.1_02441	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JANASZ010000001.1	2334959	2336251
GCA_024586465.1	GCA_024586465.1_02519	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	188	188	100.00	100.00	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JANASZ010000002.1	15195	15761
GCA_024586465.1	GCA_024586465.1_02520	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JANASZ010000002.1	15940	17484
GCA_024586465.1	GCA_024586465.1_02572	lsa(B)	ABC-F type ribosomal protection protein Lsa(B)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_011133547.1	ABC-F type ribosomal protection protein Lsa(B)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JANASZ010000003.1	19394	20872
GCA_024586465.1	GCA_024586465.1_02576	cfr	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	core	AMR	AMR	LINCOSAMIDE/OXAZOLIDINONE/PHENICOL/PLEUROMUTILIN/STREPTOGRAMIN	CHLORAMPHENICOL/CLINDAMYCIN/FLORFENICOL/LINEZOLID/STREPTOGRAMIN B/TIAMULIN/VIRGINIAMYCIN	EXACTP	349	349	100.00	100.00	349	WP_001010505.1	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	JANASZ010000003.1	23979	25028
GCA_024586465.1	GCA_024586465.1_02593	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JANASZ010000004.1	329	1063
GCA_024586465.1	GCA_024586465.1_02597	catA	type A-7 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	215	215	100.00	100.00	215	WP_002331392.1	type A-7 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	JANASZ010000004.1	4276	4923
GCA_024586465.1	GCA_024586465.1_02601	fosB1	fosfomycin resistance bacillithiol transferase FosB1	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_011276918.1	fosfomycin resistance bacillithiol transferase FosB1	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	JANASZ010000005.1	1925	2344
GCA_024586465.1	GCA_024586465.1_02606	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JANASZ010000006.1	505	1884
GCA_027594625.1	GCA_027594625.1_00029	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092478.1	30890	32179
GCA_027594625.1	GCA_027594625.1_00032	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP092478.1	33476	35482
GCA_027594625.1	GCA_027594625.1_00051	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP092478.1	51237	51638
GCA_027594625.1	GCA_027594625.1_00052	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.17	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092478.1	51656	52948
GCA_027594625.1	GCA_027594625.1_00136	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP092478.1	127987	129279
GCA_027594625.1	GCA_027594625.1_01401	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP092478.1	1361768	1362265
GCA_027594625.1	GCA_027594625.1_01670	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP092478.1	1629923	1631362
GCA_027594625.1	GCA_027594625.1_02064	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP092478.1	2021570	2022211
GCA_027594625.1	GCA_027594625.1_02289	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP092478.1	2236305	2237744
GCA_027594625.1	GCA_027594625.1_02294	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP092478.1	2242800	2244266
GCA_027594625.1	GCA_027594625.1_02295	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP092478.1	2244365	2245264
GCA_027594625.1	GCA_027594625.1_02547	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP092478.1	2490732	2491577
GCA_027594625.1	GCA_027594625.1_02548	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP092478.1	2491684	2493441
GCA_027594625.1	GCA_027594625.1_02549	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP092478.1	2493431	2493811
GCA_027594625.1	GCA_027594625.1_02560	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	CP092478.1	2503371	2503694
GCA_027594625.1	GCA_027594625.1_02565	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP092478.1	2507322	2507864
GCA_027594625.1	GCA_027594625.1_02566	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP092478.1	2507957	2508751
GCA_027594625.1	GCA_027594625.1_02658	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP092479.1	27005	28384
GCA_013394875.1	GCA_013394875.1_01130	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JABXYS010000004.1	8057	9976
GCA_013394875.1	GCA_013394875.1_01923	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.23	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JABXYS010000005.1	353147	354625
GCA_003474105.1	GCA_003474105.1_01858	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	90.85	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	QRNT01000075.1	3626	5104
GCA_001722255.1	GCA_001722255.1_01181	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	MIFV01000012.1	308104	309525
GCA_000143745.1	GCA_000143745.1_02783	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	97.44	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	GL379766.1	229901	232015
GCA_015559825.1	GCA_015559825.1_00144	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JADMQQ010000001.1	103134	104597
GCA_015559825.1	GCA_015559825.1_00145	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JADMQQ010000001.1	104717	105934
GCA_015559825.1	GCA_015559825.1_00326	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.79	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JADMQQ010000001.1	286165	286593
GCA_007004265.1	GCA_007004265.1_00294	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	97.12	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	VJMO01000013.1	14055	14369
GCA_007004265.1	GCA_007004265.1_00295	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	VJMO01000013.1	14369	15658
GCA_007004265.1	GCA_007004265.1_02373	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	VJMO01000008.1	40405	41697
GCA_022689445.1	GCA_022689445.1_01355	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCXJ010000003.1	45338	45757
GCA_022689445.1	GCA_022689445.1_01993	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALCXJ010000006.1	24790	25191
GCA_022689445.1	GCA_022689445.1_01994	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXJ010000006.1	25209	26498
GCA_022689445.1	GCA_022689445.1_02131	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	73.00	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCXJ010000006.1	184073	185365
GCA_022689445.1	GCA_022689445.1_02145	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JALCXJ010000007.1	10223	11296
GCA_001697665.1	GCA_001697665.1_00090	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016662.1	77000	78379
GCA_001697665.1	GCA_001697665.1_01154	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016662.1	1157102	1158628
GCA_001697665.1	GCA_001697665.1_01354	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016662.1	1369075	1370643
GCA_001697665.1	GCA_001697665.1_01356	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016662.1	1371468	1372100
GCA_001697665.1	GCA_001697665.1_01357	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016662.1	1372508	1373746
GCA_001697665.1	GCA_001697665.1_01481	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016662.1	1508220	1509125
GCA_003490305.1	GCA_003490305.1_00959	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	94.83	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQIA01000003.1	119123	120517
GCA_030223725.1	GCA_030223725.1_00028	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JASOSY010000010.1	21112	23031
GCA_030223725.1	GCA_030223725.1_00072	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	89.23	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JASOSY010000012.1	18038	19516
GCA_002754015.1	GCA_002754015.1_00383	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP024591.1	430869	431669
GCA_959023615.1	GCA_959023615.1_01330	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAUFCN010000006.1	55927	56328
GCA_959023615.1	GCA_959023615.1_02037	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAUFCN010000015.1	10633	11043
GCA_022690005.1	GCA_022690005.1_00914	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JALCWG010000022.1	167	490
GCA_022690005.1	GCA_022690005.1_01580	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCWG010000003.1	98492	98839
GCA_022690005.1	GCA_022690005.1_01584	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCWG010000003.1	102522	103814
GCA_022690005.1	GCA_022690005.1_02295	fosB	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_032488468.1	fosfomycin resistance bacillithiol transferase FosB	NF000085.1	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	JALCWG010000009.1	16019	16438
GCA_003241455.1	GCA_003241455.1_01112	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	321	299	100.00	55.99	309	WP_038576754.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	QFPX01000002.1	18715	19680
GCA_009496435.1	GCA_009496435.1_00561	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.25	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	WIJS01000002.1	37660	38859
GCA_003494695.1	GCA_003494695.1_00487	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQHH01000001.1	484874	486268
GCA_003494695.1	GCA_003494695.1_01657	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	QQHH01000005.1	52012	53652
GCA_011682985.1	GCA_011682985.1_01389	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	VCOY01000024.1	4775	6556
GCA_011682985.1	GCA_011682985.1_02003	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	VCOY01000042.1	144	590
GCA_011682985.1	GCA_011682985.1_02024	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	291	263	100.00	100.00	263	WP_001206316.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	VCOY01000046.1	407	1282
GCA_011682985.1	GCA_011682985.1_02025	aac(6)-Ia	aminoglycoside 6-N-acetyltransferase AAC(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	185	185	100.00	100.00	185	WP_013136949.1	aminoglycoside 6-N-acetyltransferase AAC(6)-Ia	NF033078.2	AAC(6)-Ia family aminoglycoside 6-N-acetyltransferase	VCOY01000046.1	1764	2321
GCA_011682985.1	GCA_011682985.1_02179	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.97	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VCOY01000050.1	376	1797
GCA_011682985.1	GCA_011682985.1_02191	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	VCOY01000053.1	1074	2993
GCA_011682985.1	GCA_011682985.1_02207	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	VCOY01000058.1	837	1676
GCA_011682985.1	GCA_011682985.1_02208	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	VCOY01000058.1	1670	2017
GCA_011682985.1	GCA_011682985.1_02347	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	VCOY01000067.1	181	1035
GCA_014596375.1	GCA_014596375.1_00396	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	MAYZ01000012.1	238048	239427
GCA_014596375.1	GCA_014596375.1_00944	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	93.93	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	MAYZ01000020.1	171902	173140
GCA_014596375.1	GCA_014596375.1_01190	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.24	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	MAYZ01000021.1	173705	175231
GCA_021378685.1	GCA_021378685.1_00266	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_050824634.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP089334.1	338833	340752
GCA_024539935.1	GCA_024539935.1_00376	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFJME010000012.1	69647	71071
GCA_024539935.1	GCA_024539935.1_01173	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	98.99	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JAFJME010000004.1	3756	5537
GCA_024539935.1	GCA_024539935.1_01610	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAFJME010000041.1	457	1293
GCA_024539935.1	GCA_024539935.1_01611	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JAFJME010000041.1	1293	2096
GCA_024539935.1	GCA_024539935.1_01614	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAFJME010000041.1	3391	4206
GCA_024539935.1	GCA_024539935.1_02145	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAFJME010000009.1	9350	10525
GCA_008586805.1	GCA_008586805.1_00282	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP043772.1	293394	294788
GCA_001679485.1	GCA_001679485.1_00962	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LZOZ01000012.1	76718	78358
GCA_021390135.1	GCA_021390135.1_00086	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP090001.1	102552	103910
GCA_021390135.1	GCA_021390135.1_00290	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP090001.1	333368	334723
GCA_021390135.1	GCA_021390135.1_00328	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP090001.1	367898	368509
GCA_021390135.1	GCA_021390135.1_01065	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP090001.1	1091210	1091701
GCA_021390135.1	GCA_021390135.1_01560	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP090001.1	1616553	1617305
GCA_021390135.1	GCA_021390135.1_01734	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP090001.1	1809965	1811257
GCA_021390135.1	GCA_021390135.1_01776	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP090001.1	1848499	1849215
GCA_021390135.1	GCA_021390135.1_01779	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP090001.1	1850990	1851712
GCA_021390135.1	GCA_021390135.1_01780	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP090001.1	1851837	1852544
GCA_021390135.1	GCA_021390135.1_01790	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP090001.1	1864193	1865176
GCA_021390135.1	GCA_021390135.1_01791	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP090001.1	1865178	1866098
GCA_021390135.1	GCA_021390135.1_01966	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP090001.1	2012351	2012485
GCA_021390135.1	GCA_021390135.1_02115	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP090001.1	2164774	2166216
GCA_021390135.1	GCA_021390135.1_02290	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP090001.1	2318266	2318685
GCA_021390135.1	GCA_021390135.1_02378	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP090001.1	2407927	2408892
GCA_021390135.1	GCA_021390135.1_02379	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP090001.1	2409460	2410407
GCA_021390135.1	GCA_021390135.1_02380	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP090001.1	2410409	2411386
GCA_021390135.1	GCA_021390135.1_02456	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1499	1115	61.43	99.42	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP090001.1	2488743	2493242
GCA_021390135.1	GCA_021390135.1_02601	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP090001.1	2651023	2652552
GCA_021390135.1	GCA_021390135.1_02635	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP090001.1	2695886	2696938
GCA_000195045.1	GCA_000195045.1_00727	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	GL878559.1	714962	716881
GCA_000195045.1	GCA_000195045.1_02173	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GL878562.1	223502	225142
GCA_019330125.1	GCA_019330125.1_00828	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP073887.1	805258	805743
GCA_019330125.1	GCA_019330125.1_00831	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP073887.1	807499	808938
GCA_019330125.1	GCA_019330125.1_00952	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP073887.1	884564	885205
GCA_019330125.1	GCA_019330125.1_00973	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP073887.1	904025	904870
GCA_019330125.1	GCA_019330125.1_00974	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP073887.1	904977	906734
GCA_019330125.1	GCA_019330125.1_00975	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP073887.1	906724	907104
GCA_019330125.1	GCA_019330125.1_02464	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP073887.1	2422183	2423250
GCA_019330125.1	GCA_019330125.1_02515	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP073887.1	2481048	2481284
GCA_019330125.1	GCA_019330125.1_02592	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP073887.1	2563922	2564269
GCA_019330125.1	GCA_019330125.1_02595	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	432	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP073887.1	2566438	2567736
GCA_019330125.1	GCA_019330125.1_02605	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP073887.1	2576522	2577172
GCA_019330125.1	GCA_019330125.1_02606	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP073887.1	2577254	2578897
GCA_019330125.1	GCA_019330125.1_02607	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP073887.1	2578955	2579293
GCA_019330125.1	GCA_019330125.1_02653	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP073887.1	2618259	2618630
GCA_019330125.1	GCA_019330125.1_02654	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP073887.1	2618630	2620387
GCA_019330125.1	GCA_019330125.1_02655	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP073887.1	2620487	2622493
GCA_019330125.1	GCA_019330125.1_02745	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP073886.1	411	971
GCA_019330125.1	GCA_019330125.1_02758	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	PARTIALP	390	514	75.88	99.74	390	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NA	NA	CP073886.1	12252	13424
GCA_026782645.1	GCA_026782645.1_00908	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAKUWY010000003.1	59947	61164
GCA_026782645.1	GCA_026782645.1_00909	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAKUWY010000003.1	61284	62747
GCA_026782645.1	GCA_026782645.1_01154	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAKUWY010000003.1	297118	297546
GCA_024330435.1	GCA_024330435.1_02127	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	99.18	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	JANDWY010000041.1	12792	13526
GCA_024330435.1	GCA_024330435.1_02428	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANDWY010000058.1	809	1774
GCA_023704215.1	GCA_023704215.1_00446	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP094969.1	479816	481735
GCA_027660775.1	GCA_027660775.1_00835	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAQDMU010000018.1	520	1257
GCA_027660775.1	GCA_027660775.1_00852	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQDMU010000018.1	13647	15566
GCA_001983955.1	GCA_001983955.1_00920	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	96.30	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CP019562.1	935477	936694
GCA_001983955.1	GCA_001983955.1_00921	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP019562.1	936814	938277
GCA_000191085.1	GCA_000191085.1_01518	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GL872307.1	1541490	1543130
GCA_002205555.1	GCA_002205555.1_00912	aac(3)	aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	279	269	98.14	59.09	264	WP_033147097.1	aminoglycoside 3-N-acetyltransferase	NF033082.0	aminoglycoside 3-N-acetyltransferase	CP021995.1	936522	937361
GCA_002205555.1	GCA_002205555.1_01674	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	HMM	80	81	75.31	72.13	61	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	CP021995.1	1735030	1735272
GCA_002205555.1	GCA_002205555.1_01676	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	494	562	87.01	43.85	504	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP021995.1	1736761	1738245
GCA_002205555.1	GCA_002205555.1_01949	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	145	147	95.24	46.43	140	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP021995.1	2024598	2025035
GCA_002205555.1	GCA_002205555.1_02535	catB	type B chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	213	210	97.62	73.66	205	WP_031281281.1	type B chloramphenicol O-acetyltransferase	NF000490.1	type B chloramphenicol O-acetyltransferase	CP021995.1	2615683	2616324
GCA_002205555.1	GCA_002205555.1_02568	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	302	98.68	44.12	306	WP_105777201.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP021995.1	2649862	2650746
GCA_017753665.1	GCA_017753665.1_00375	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.95	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP072524.1	409973	411352
GCA_000092265.1	GCA_000092265.1_01456	blaBRO-2	class A beta-lactamase BRO-2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003665544.1	class A beta-lactamase BRO-2	NF033103.1	class A beta-lactamase	CP002005.1	1565907	1566848
GCA_963393115.1	GCA_963393115.1_00062	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.83	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJOF010000001.1	54191	55717
GCA_963393115.1	GCA_963393115.1_00456	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJOF010000002.1	139995	140858
GCA_963393115.1	GCA_963393115.1_00457	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJOF010000002.1	140875	142113
GCA_963393115.1	GCA_963393115.1_00621	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJOF010000003.1	77342	78721
GCA_963393115.1	GCA_963393115.1_01783	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJOF010000014.1	19163	20068
GCA_022869625.1	GCA_022869625.1_00687	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP064365.1	669688	670299
GCA_022869625.1	GCA_022869625.1_00725	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP064365.1	703474	704829
GCA_022869625.1	GCA_022869625.1_00928	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP064365.1	934285	935643
GCA_022869625.1	GCA_022869625.1_01061	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP064365.1	1080655	1081707
GCA_022869625.1	GCA_022869625.1_01095	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP064365.1	1125041	1126570
GCA_022869625.1	GCA_022869625.1_01239	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1371	1115	61.43	99.12	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP064365.1	1284350	1288465
GCA_022869625.1	GCA_022869625.1_01315	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP064365.1	1365822	1366799
GCA_022869625.1	GCA_022869625.1_01316	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP064365.1	1366801	1367748
GCA_022869625.1	GCA_022869625.1_01317	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP064365.1	1368316	1369281
GCA_022869625.1	GCA_022869625.1_01404	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP064365.1	1458523	1458942
GCA_022869625.1	GCA_022869625.1_01579	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP064365.1	1610877	1612319
GCA_022869625.1	GCA_022869625.1_01729	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP064365.1	1766834	1766968
GCA_022869625.1	GCA_022869625.1_01903	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP064365.1	1913279	1914199
GCA_022869625.1	GCA_022869625.1_01904	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP064365.1	1914201	1915184
GCA_022869625.1	GCA_022869625.1_01914	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	99.57	235	ABD31004.1	serine protease SplA	NA	NA	CP064365.1	1926833	1927540
GCA_022869625.1	GCA_022869625.1_01915	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP064365.1	1927665	1928387
GCA_022869625.1	GCA_022869625.1_01918	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP064365.1	1930162	1930878
GCA_022869625.1	GCA_022869625.1_01960	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP064365.1	1968120	1969412
GCA_022869625.1	GCA_022869625.1_02133	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP064365.1	2161549	2162301
GCA_022869625.1	GCA_022869625.1_02698	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP064366.1	5131	5526
GCA_022869625.1	GCA_022869625.1_02699	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.53	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP064366.1	5544	6833
GCA_022869625.1	GCA_022869625.1_02700	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP064366.1	6833	7147
GCA_022869625.1	GCA_022869625.1_02709	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	CP064366.1	14108	15541
GCA_003264045.1	GCA_003264045.1_00345	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	124	123	100.00	45.60	125	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	NAQT01000008.1	4702	5076
GCA_003264045.1	GCA_003264045.1_01013	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	547	631	87.64	90.24	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NAQT01000015.1	307299	308942
GCA_936919775.1	GCA_936919775.1_00616	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CAKZGT010000044.1	13941	14363
GCA_936919775.1	GCA_936919775.1_01922	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	220	216	93.52	50.00	202	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CAKZGT010000141.1	3429	4091
GCA_936919775.1	GCA_936919775.1_01923	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	478	631	73.06	44.80	471	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CAKZGT010000141.1	4151	5587
GCA_001813335.1	GCA_001813335.1_01425	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.51	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	KV812096.1	55051	56430
GCA_000270465.1	GCA_000270465.1_00024	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	FR870271.1	27346	28419
GCA_000270465.1	GCA_000270465.1_00174	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	FR870271.1	188305	189597
GCA_000270465.1	GCA_000270465.1_02117	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	FR870271.1	2117972	2118391
GCA_016648825.1	GCA_016648825.1_00106	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JACLQT010000001.1	112503	114239
GCA_016648825.1	GCA_016648825.1_00107	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JACLQT010000001.1	114241	115965
GCA_016648825.1	GCA_016648825.1_01649	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JACLQT010000005.1	20840	22303
GCA_016648825.1	GCA_016648825.1_01650	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JACLQT010000005.1	22423	23640
GCA_016648825.1	GCA_016648825.1_01664	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JACLQT010000005.1	35212	35640
GCA_030227325.1	GCA_030227325.1_00571	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPIR010000018.1	44055	44909
GCA_001063455.1	GCA_001063455.1_00817	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	JVFL01000052.1	22997	24376
GCA_027697045.1	GCA_027697045.1_00508	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQESX010000010.1	12079	12489
GCA_027697045.1	GCA_027697045.1_01219	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAQESX010000024.1	198	1052
GCA_027697045.1	GCA_027697045.1_01498	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	37.78	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAQESX010000004.1	21455	21856
GCA_014645875.1	GCA_014645875.1_01485	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	BMMO01000007.1	85777	86124
GCA_014645875.1	GCA_014645875.1_01489	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BMMO01000007.1	89807	91099
GCA_014645875.1	GCA_014645875.1_02094	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	BMMO01000017.1	14753	16219
GCA_014645875.1	GCA_014645875.1_02095	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	BMMO01000017.1	16318	17217
GCA_014645875.1	GCA_014645875.1_02097	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	188	188	100.00	99.47	188	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	BMMO01000017.1	18521	19087
GCA_014645875.1	GCA_014645875.1_02098	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.42	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	BMMO01000017.1	19264	20808
GCA_900105405.1	GCA_900105405.1_00415	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	LT629773.1	489925	491403
GCA_015070685.1	GCA_015070685.1_00043	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	142	96.48	74.45	137	WP_204376221.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JADCSD010000001.1	31493	31909
GCA_015070685.1	GCA_015070685.1_01062	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.72	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JADCSD010000002.1	140072	141364
GCA_015070685.1	GCA_015070685.1_01155	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JADCSD010000002.1	236887	238176
GCA_015070685.1	GCA_015070685.1_01156	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JADCSD010000002.1	238194	238595
GCA_900116825.1	GCA_900116825.1_00084	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	288	302	90.73	58.12	277	WP_158386862.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	FPBX01000008.1	44210	45076
GCA_900116825.1	GCA_900116825.1_01757	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	120	120	99.17	50.00	120	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	FPBX01000004.1	158868	159230
GCA_030176375.1	GCA_030176375.1_00885	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUJ010000020.1	14881	15735
GCA_011714855.1	GCA_011714855.1_00168	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RXXR01000012.1	29010	30929
GCA_011714855.1	GCA_011714855.1_00169	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RXXR01000012.1	32036	32773
GCA_011714855.1	GCA_011714855.1_01862	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.49	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	RXXR01000005.1	106088	107509
GCA_014054945.1	GCA_014054945.1_00714	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.30	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP059566.1	731497	732876
GCA_030229835.1	GCA_030229835.1_00024	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPGS010000011.1	808	1662
GCA_019703525.1	GCA_019703525.1_01653	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.84	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018770.1	1636272	1637666
GCA_026013785.1	GCA_026013785.1_01794	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CP110228.1	2038690	2040615
GCA_003943535.1	GCA_003943535.1_00705	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417517.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJPU01000002.1	90554	91771
GCA_003943535.1	GCA_003943535.1_00706	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420317.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJPU01000002.1	91891	93354
GCA_938029845.1	GCA_938029845.1_02502	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	90.33	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	CALHGG010000168.1	32772	34697
GCA_003470675.1	GCA_003470675.1_01088	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	QRKC01000001.1	1381107	1383032
GCA_003470675.1	GCA_003470675.1_01599	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	378	388	97.42	99.74	378	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	QRKC01000013.1	82401	83537
GCA_003470675.1	GCA_003470675.1_01600	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	EXACTP	266	266	100.00	100.00	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	QRKC01000013.1	83750	84550
GCA_003470675.1	GCA_003470675.1_02448	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	109	121	83.47	43.69	103	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	QRKC01000003.1	234712	235041
GCA_943913685.1	GCA_943913685.1_01285	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	121	123	100.00	45.53	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CALTZC010000039.1	12969	13334
GCA_000613985.1	GCA_000613985.1_00058	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	BAKD01000010.1	58	1023
GCA_001697405.1	GCA_001697405.1_00580	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP016649.1	626410	627315
GCA_001697405.1	GCA_001697405.1_00704	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.30	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP016649.1	761718	762956
GCA_001697405.1	GCA_001697405.1_00705	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP016649.1	763364	763996
GCA_001697405.1	GCA_001697405.1_00707	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP016649.1	764821	766389
GCA_001697405.1	GCA_001697405.1_00907	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	99.41	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP016649.1	976127	977653
GCA_001697405.1	GCA_001697405.1_01969	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.99	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP016649.1	2055910	2057289
GCA_963394815.1	GCA_963394815.1_00291	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJPL010000002.1	132821	133726
GCA_963394815.1	GCA_963394815.1_00782	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.06	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPL010000008.1	50042	51568
GCA_963394815.1	GCA_963394815.1_01486	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CAUJPL010000024.1	13553	15121
GCA_963394815.1	GCA_963394815.1_01488	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	96.67	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJPL010000024.1	15913	16545
GCA_963394815.1	GCA_963394815.1_01489	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.87	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPL010000024.1	16792	18030
GCA_003944345.1	GCA_003944345.1_01783	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJQA01000008.1	2131	3594
GCA_003944345.1	GCA_003944345.1_01784	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJQA01000008.1	3714	4931
GCA_003944345.1	GCA_003944345.1_01969	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	59.85	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJQA01000014.1	2371	2799
GCA_012955505.1	GCA_012955505.1_00085	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	547	668	81.89	100.00	547	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000237.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase	CP052055.1	65357	67000
GCA_012955505.1	GCA_012955505.1_00131	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP052055.1	106893	107294
GCA_012955505.1	GCA_012955505.1_00132	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP052055.1	107312	108601
GCA_012955505.1	GCA_012955505.1_00155	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP052055.1	126588	126980
GCA_012955505.1	GCA_012955505.1_00156	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP052055.1	126998	128290
GCA_012955505.1	GCA_012955505.1_00236	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	78.32	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP052055.1	194234	195523
GCA_012955505.1	GCA_012955505.1_02653	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP052055.1	2231957	2232361
GCA_012955505.1	GCA_012955505.1_02654	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP052055.1	2232578	2233321
GCA_019048325.1	GCA_019048325.1_00711	copB	copper/silver-translocating P-type ATPase CopB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	756	745	95.57	84.39	724	AFM70730.1	copper/silver-translocating P-type ATPase CopB	NA	NA	CP077320.1	702467	704737
GCA_019048325.1	GCA_019048325.1_01111	aac(6)-I	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	183	183	100.00	100.00	183	WP_016177698.1	aminoglycoside 6-N-acetyltransferase	NF000165.3	aminoglycoside 6-N-acetyltransferase	CP077320.1	1106776	1107327
GCA_019048325.1	GCA_019048325.1_01989	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	99.01	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP077320.1	2003855	2005969
GCA_019048325.1	GCA_019048325.1_02973	clpL	ATP-dependent protease ClpL	plus	STRESS	HEAT	NA	NA	BLASTP	704	704	100.00	99.01	704	ADB69780.1	ATP-dependent protease ClpL	NA	NA	CP077321.1	112728	114842
GCA_000814775.1	GCA_000814775.1_00630	tet(T)	tetracycline resistance ribosomal protection protein Tet(T)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	561	651	86.18	99.47	561	WP_063856412.1	tetracycline resistance ribosomal protection protein Tet(T)	NF012153.1	tetracycline resistance ribosomal protection protein	AUZI01000011.1	126583	128268
GCA_025144565.1	GCA_025144565.1_01176	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JALXKQ010000020.1	6220	7074
GCA_025144565.1	GCA_025144565.1_01180	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	45.13	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXKQ010000020.1	8797	10218
GCA_025144565.1	GCA_025144565.1_01447	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	86.70	45.64	195	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JALXKQ010000004.1	9125	9778
GCA_025144565.1	GCA_025144565.1_01448	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.47	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXKQ010000004.1	9813	11237
GCA_900450455.1	GCA_900450455.1_01039	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	UGGN01000001.1	719638	721557
GCA_019734215.1	GCA_019734215.1_01252	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	294	296	100.00	64.53	296	WP_005827792.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	JAASHK010000018.1	136746	137630
GCA_019734215.1	GCA_019734215.1_02601	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAASHK010000042.1	11708	13633
GCA_019734215.1	GCA_019734215.1_02632	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAASHK010000046.1	83	883
GCA_019734215.1	GCA_019734215.1_03063	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	JAASHK010000007.1	78303	79118
GCA_018588765.1	GCA_018588765.1_00984	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	BLASTP	264	264	100.00	99.62	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JAFEVX010000012.1	1143	1937
GCA_018205295.1	GCA_018205295.1_02242	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691746.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JADRHJ010000009.1	27810	29729
GCA_018205295.1	GCA_018205295.1_02253	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	JADRHJ010000009.1	37019	37813
GCA_018205295.1	GCA_018205295.1_02254	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	JADRHJ010000009.1	37906	38448
GCA_018205295.1	GCA_018205295.1_02255	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255864.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	JADRHJ010000009.1	38445	39353
GCA_014622665.1	GCA_014622665.1_01615	arsN2	arsenic resistance N-acetyltransferase ArsN2	plus	STRESS	METAL	ARSENIC	ARSENIC	HMM	153	147	97.28	48.61	144	UIK15784.1	arsenic resistance N-acetyltransferase ArsN2	NF040501.1	arsenic resistance N-acetyltransferase ArsN2	CP061202.1	1702416	1702877
GCA_024295505.1	GCA_024295505.1_00210	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JANCOT010000001.1	205641	206858
GCA_024295505.1	GCA_024295505.1_00211	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JANCOT010000001.1	206978	208441
GCA_024295505.1	GCA_024295505.1_00216	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JANCOT010000001.1	210182	210610
GCA_024295505.1	GCA_024295505.1_00550	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.19	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JANCOT010000011.1	53116	54852
GCA_024295505.1	GCA_024295505.1_00551	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	98.43	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JANCOT010000011.1	54854	56578
GCA_024295505.1	GCA_024295505.1_01365	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JANCOT010000003.1	180663	182582
GCA_024295505.1	GCA_024295505.1_01574	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JANCOT010000004.1	167368	169263
GCA_000160035.2	GCA_000160035.2_02416	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KI535369.1	269322	271241
GCA_000614005.1	GCA_000614005.1_00997	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	BAKE01000041.1	20972	22897
GCA_000614005.1	GCA_000614005.1_01554	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	BAKE01000023.1	18547	19512
GCA_938021135.1	GCA_938021135.1_00009	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CALIHJ010000001.1	9174	9974
GCA_938021135.1	GCA_938021135.1_01071	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	551	641	85.96	99.46	551	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012153.1	tetracycline resistance ribosomal protection protein	CALIHJ010000030.1	3	1658
GCA_017167505.1	GCA_017167505.1_00457	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAFDPR010000001.1	7367	8791
GCA_013277255.1	GCA_013277255.1_00766	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	PARTIALP	347	399	86.97	98.27	347	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMMK01000025.1	26455	27498
GCA_003494075.1	GCA_003494075.1_01863	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.12	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQIY01000012.1	4882	6276
GCA_013357445.1	GCA_013357445.1_00548	msr(E)	ABC-F type ribosomal protection protein Msr(E)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN	EXACTP	491	491	100.00	100.00	491	WP_000052512.1	ABC-F type ribosomal protection protein Msr(E)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CP053614.1	610846	612321
GCA_013357445.1	GCA_013357445.1_00549	mph(E)	Mph(E) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN	EXACTP	294	294	100.00	100.00	294	WP_000155092.1	Mph(E) family macrolide 2-phosphotransferase	NF012158.1	Mph(E) family macrolide 2-phosphotransferase	CP053614.1	612377	613261
GCA_013357445.1	GCA_013357445.1_00552	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	CP053614.1	614690	615505
GCA_013357445.1	GCA_013357445.1_00559	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP053614.1	623718	624065
GCA_013357445.1	GCA_013357445.1_00560	arr-3	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	EXACTP	150	150	100.00	100.00	150	WP_001749986.1	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP053614.1	624288	624740
GCA_013357445.1	GCA_013357445.1_00561	aac(6)-Ib-cr	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr	core	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	PARTIALP	113	184	51.09	100.00	94	WP_063840321.1	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr5	NA	NA	CP053614.1	625094	625435
GCA_013357445.1	GCA_013357445.1_00573	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	EXACTP	404	404	100.00	100.00	404	WP_000214122.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP053614.1	634089	635303
GCA_013357445.1	GCA_013357445.1_00578	aph(4)-Ia	aminoglycoside O-phosphotransferase APH(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	HYGROMYCIN	EXACTP	341	341	100.00	100.00	341	WP_000742814.1	aminoglycoside O-phosphotransferase APH(4)-Ia	NF000107.2	aminoglycoside O-phosphotransferase APH(4)-Ia	CP053614.1	638636	639661
GCA_013357445.1	GCA_013357445.1_00580	aac(3)-IVa	aminoglycoside N-acetyltransferase AAC(3)-IVa	core	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	PARTIALP	236	258	88.76	100.00	229	WP_001199192.1	aminoglycoside N-acetyltransferase AAC(3)-IVa	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	CP053614.1	639955	640665
GCA_013357445.1	GCA_013357445.1_00583	blaNDM-1	subclass B1 metallo-beta-lactamase NDM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	270	270	100.00	100.00	270	WP_004201164.1	subclass B1 metallo-beta-lactamase NDM-1	NF000259.2	NDM family subclass B1 metallo-beta-lactamase	CP053614.1	642265	643077
GCA_013357445.1	GCA_013357445.1_00595	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	CP053614.1	653118	653957
GCA_013357445.1	GCA_013357445.1_00596	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP053614.1	653951	654298
GCA_013357445.1	GCA_013357445.1_00597	arr-3	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	EXACTP	150	150	100.00	100.00	150	WP_001749986.1	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	CP053614.1	654521	654973
GCA_013357445.1	GCA_013357445.1_00598	aac(6)-Ib-cr	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr	core	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	BLASTP	199	184	100.00	100.00	184	WP_063840321.1	fluoroquinolone-acetylating aminoglycoside 6-N-acetyltransferase AAC(6)-Ib-cr5	NF033074.0	AAC(6)-Ib family aminoglycoside 6-N-acetyltransferase	CP053614.1	655070	655669
GCA_013357445.1	GCA_013357445.1_00609	floR	chloramphenicol/florfenicol efflux MFS transporter FloR	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	PARTIALP	346	404	85.64	100.00	346	WP_000214122.1	chloramphenicol/florfenicol efflux MFS transporter FloR	NF000219.1	chloramphenicol/florfenicol efflux MFS transporter FloR	CP053614.1	664497	665537
GCA_013357445.1	GCA_013357445.1_00616	aph(4)-Ia	aminoglycoside O-phosphotransferase APH(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	HYGROMYCIN	PARTIALP	178	341	51.91	100.00	177	WP_000742814.1	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	CP053614.1	669355	669891
GCA_013357445.1	GCA_013357445.1_00618	aac(3)-IVa	aminoglycoside N-acetyltransferase AAC(3)-IVa	core	AMR	AMR	AMINOGLYCOSIDE	APRAMYCIN/GENTAMICIN/TOBRAMYCIN	EXACTP	258	258	100.00	100.00	258	WP_001199192.1	aminoglycoside N-acetyltransferase AAC(3)-IVa	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	CP053614.1	670120	670896
GCA_013357445.1	GCA_013357445.1_00622	blaNDM-1	subclass B1 metallo-beta-lactamase NDM-1	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	270	270	100.00	100.00	270	WP_004201164.1	subclass B1 metallo-beta-lactamase NDM-1	NF000259.2	NDM family subclass B1 metallo-beta-lactamase	CP053614.1	672491	673303
GCA_013357445.1	GCA_013357445.1_00634	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	PARTIALP	238	279	85.30	99.58	238	WP_000259018.1	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	CP053614.1	683335	684051
GCA_013357445.1	GCA_013357445.1_00635	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	CP053614.1	684167	684514
GCA_013357445.1	GCA_013357445.1_00636	aadA1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	267	263	100.00	100.00	263	WP_001206316.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3)-Ia family aminoglycoside nucleotidyltransferase AadA1	CP053614.1	684678	685481
GCA_013357445.1	GCA_013357445.1_00637	dfrA1	trimethoprim-resistant dihydrofolate reductase DfrA1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	157	157	100.00	100.00	157	WP_000777554.1	trimethoprim-resistant dihydrofolate reductase DfrA1	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA	CP053614.1	685486	685959
GCA_013357445.1	GCA_013357445.1_00638	lnu(F)	lincosamide nucleotidyltransferase Lnu(F)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	281	281	100.00	100.00	281	WP_070342364.1	lincosamide nucleotidyltransferase Lnu(F)	NF000119.1	lincosamide nucleotidyltransferase Lnu(F)	CP053614.1	685956	686801
GCA_013357445.1	GCA_013357445.1_01918	catA	type A-4 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	217	217	99.08	91.63	215	WP_063843208.1	type A-4 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP053614.1	2098279	2098932
GCA_013357445.1	GCA_013357445.1_03722	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	92.19	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA	CP053614.1	3981955	3982533
GCA_013357445.1	GCA_013357445.1_03726	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	194	194	100.00	99.48	194	AAD47284.1	tellurium resistance-associated protein TerZ	NA	NA	CP053614.1	3985290	3985874
GCA_013357445.1	GCA_013357445.1_03737	tet(J)	tetracycline efflux MFS transporter Tet(J)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	398	398	99.75	99.24	397	WP_004245621.1	tetracycline efflux MFS transporter Tet(J)	NF012194.0	tetracycline efflux MFS transporter Tet(J)	CP053614.1	3995119	3996315
GCA_902858925.1	GCA_902858925.1_00794	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	LR793265.1	780804	781541
GCA_014265095.1	GCA_014265095.1_00131	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JACMXT010000013.1	16606	18150
GCA_014265095.1	GCA_014265095.1_00132	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JACMXT010000013.1	18334	18894
GCA_014265095.1	GCA_014265095.1_00195	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXT010000017.1	495	1787
GCA_014265095.1	GCA_014265095.1_00199	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMXT010000017.1	5470	5817
GCA_014265095.1	GCA_014265095.1_00210	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	JACMXT010000018.1	5352	5723
GCA_014265095.1	GCA_014265095.1_00211	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	585	585	100.00	99.83	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	JACMXT010000018.1	5723	7480
GCA_014265095.1	GCA_014265095.1_00212	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JACMXT010000018.1	7580	9586
GCA_014265095.1	GCA_014265095.1_00223	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JACMXT010000020.1	238	981
GCA_014265095.1	GCA_014265095.1_00224	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	JACMXT010000020.1	1198	1602
GCA_014265095.1	GCA_014265095.1_00229	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JACMXT010000022.1	421	1155
GCA_014265095.1	GCA_014265095.1_00904	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JACMXT010000005.1	45484	47124
GCA_014265095.1	GCA_014265095.1_00994	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	78.17	426	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMXT010000006.1	42420	43712
GCA_014265095.1	GCA_014265095.1_01045	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACMXT010000007.1	10298	10678
GCA_014265095.1	GCA_014265095.1_01046	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACMXT010000007.1	10668	12425
GCA_014265095.1	GCA_014265095.1_01047	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACMXT010000007.1	12532	13377
GCA_000019985.1	GCA_000019985.1_00177	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP001033.1	171720	173639
GCA_000019985.1	GCA_000019985.1_00178	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP001033.1	174564	175301
GCA_000019985.1	GCA_000019985.1_00970	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP001033.1	926935	928134
GCA_000019985.1	GCA_000019985.1_01334	catA	type A-9 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	216	216	100.00	100.00	216	WP_001010387.1	type A-9 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP001033.1	1279959	1280609
GCA_000019985.1	GCA_000019985.1_01364	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	261	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP001033.1	1310674	1311459
GCA_000019985.1	GCA_000019985.1_01365	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP001033.1	1311797	1312339
GCA_000019985.1	GCA_000019985.1_01366	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP001033.1	1312432	1313226
GCA_000019985.1	GCA_000019985.1_01369	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP001033.1	1314900	1315637
GCA_001837265.1	GCA_001837265.1_01309	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	133	120	100.00	38.52	135	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KV831926.1	977619	978020
GCA_001837265.1	GCA_001837265.1_01797	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.30	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV831928.1	271920	273578
GCA_015234665.1	GCA_015234665.1_01804	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JADGMA010000019.1	59095	60168
GCA_015234665.1	GCA_015234665.1_01987	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JADGMA010000021.1	82590	83879
GCA_015234665.1	GCA_015234665.1_01988	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JADGMA010000021.1	83897	84298
GCA_015234665.1	GCA_015234665.1_02253	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JADGMA010000023.1	60523	61812
GCA_030176735.1	GCA_030176735.1_00191	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVT010000012.1	68243	69097
GCA_016642265.1	GCA_016642265.1_00587	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.53	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	MRXX01000003.1	131305	133224
GCA_016642265.1	GCA_016642265.1_01035	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.29	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	MRXX01000006.1	97251	98975
GCA_016642265.1	GCA_016642265.1_01036	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	92.03	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	MRXX01000006.1	98977	100713
GCA_902460335.1	GCA_902460335.1_00107	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.75	639	WP_000691741.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CABPTQ010000001.1	99705	101624
GCA_902460335.1	GCA_902460335.1_00108	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CABPTQ010000001.1	102732	103469
GCA_025272815.1	GCA_025272815.1_00158	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP102089.1	193818	194891
GCA_025272815.1	GCA_025272815.1_00884	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP102089.1	934663	935508
GCA_025272815.1	GCA_025272815.1_00885	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP102089.1	935615	937372
GCA_025272815.1	GCA_025272815.1_00886	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP102089.1	937362	937742
GCA_025272815.1	GCA_025272815.1_00888	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP102089.1	938049	939338
GCA_025272815.1	GCA_025272815.1_02112	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP102089.1	2162754	2163599
GCA_025272815.1	GCA_025272815.1_02113	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP102089.1	2163706	2165463
GCA_025272815.1	GCA_025272815.1_02114	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP102089.1	2165453	2165833
GCA_022569035.1	GCA_022569035.1_00552	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.54	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAKRKJ010000001.1	587768	589060
GCA_022569035.1	GCA_022569035.1_01411	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAKRKJ010000005.1	18790	19863
GCA_022569035.1	GCA_022569035.1_01758	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAKRKJ010000007.1	42924	43343
GCA_007992795.1	GCA_007992795.1_00684	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BKAY01000005.1	121143	122435
GCA_007992795.1	GCA_007992795.1_01368	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	BKAY01000010.1	68452	69741
GCA_007992795.1	GCA_007992795.1_02412	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	PARTIALP	88	122	72.13	96.59	88	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA	BKAY01000046.1	2437	2703
GCA_001422025.1	GCA_001422025.1_00019	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	324	303	97.36	55.74	305	WP_063857820.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	LMLT01000001.1	16806	17780
GCA_001422025.1	GCA_001422025.1_00179	emrA	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	392	393	100.00	88.55	393	CAQ45063.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	LMLT01000001.1	184881	186059
GCA_001422025.1	GCA_001422025.1_00620	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	564	562	100.00	79.26	564	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LMLT01000001.1	672909	674603
GCA_001422025.1	GCA_001422025.1_00621	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	92	91	100.00	68.48	92	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	LMLT01000001.1	674611	674889
GCA_001422025.1	GCA_001422025.1_00673	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	346	345	95.94	35.80	338	WP_063842277.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	LMLT01000002.1	15337	16377
GCA_001422025.1	GCA_001422025.1_00823	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	414	396	99.24	67.01	394	WP_124470450.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	LMLT01000004.1	95055	96299
GCA_001422025.1	GCA_001422025.1_01558	blaCESS	CESS family extended-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	HMM	296	297	99.66	73.99	296	WP_062166693.1	CESS family extended-spectrum class A beta-lactamase	NF050797.1	CESS family extended-spectrum class A beta-lactamase	LMLT01000005.1	210106	210996
GCA_001422025.1	GCA_001422025.1_01611	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	346	345	93.91	36.45	332	WP_063842277.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	LMLT01000005.1	273023	274063
GCA_001422025.1	GCA_001422025.1_01986	aph(6)-I	APH(6)-I family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	269	270	99.26	74.25	268	WP_063841666.1	APH(6)-I family aminoglycoside O-phosphotransferase	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	LMLT01000006.1	256910	257719
GCA_002850575.1	GCA_002850575.1_02499	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	108	102	100.00	72.38	105	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP025225.1	2626577	2626903
GCA_002850575.1	GCA_002850575.1_03054	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	100.00	77.30	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	CP025225.1	3169186	3169617
GCA_002850575.1	GCA_002850575.1_03091	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.18	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	CP025225.1	3214587	3215702
GCA_002850575.1	GCA_002850575.1_03092	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	90.62	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	CP025225.1	3215844	3219503
GCA_002850575.1	GCA_002850575.1_03095	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	94.34	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	CP025225.1	3221919	3224093
GCA_002850575.1	GCA_002850575.1_04095	ampC-Ecan	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	381	381	100.00	100.00	381	WP_006178946.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	NF041666.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	CP025225.1	4275049	4276194
GCA_002850575.1	GCA_002850575.1_04493	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	88.81	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP025225.1	4673696	4674589
GCA_030435935.1	GCA_030435935.1_00070	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP129369.1	72214	72711
GCA_030435935.1	GCA_030435935.1_00093	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	85.08	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP129369.1	89751	91040
GCA_030435935.1	GCA_030435935.1_00123	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP129369.1	119400	121406
GCA_030435935.1	GCA_030435935.1_00154	qacG	quaternary ammonium compound efflux SMR transporter QacG	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	99.07	107	WP_015740450.1	quaternary ammonium compound efflux SMR transporter QacG	NF000277.1	quaternary ammonium compound efflux SMR transporter QacG	CP129369.1	153733	154056
GCA_030435935.1	GCA_030435935.1_00233	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP129369.1	225244	226536
GCA_030435935.1	GCA_030435935.1_01306	fexA	chloramphenicol/florfenicol efflux MFS transporter FexA	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	475	475	100.00	98.74	475	WP_015585966.1	chloramphenicol/florfenicol efflux MFS transporter FexA	NF000218.1	chloramphenicol/florfenicol efflux MFS transporter FexA	CP129369.1	1292964	1294391
GCA_030435935.1	GCA_030435935.1_01918	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP129369.1	1889305	1890048
GCA_030435935.1	GCA_030435935.1_01928	lnu(B)	lincosamide nucleotidyltransferase Lnu(B)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	267	267	100.00	100.00	267	WP_002294514.1	lincosamide nucleotidyltransferase Lnu(B)	NF000235.3	lincosamide nucleotidyltransferase Lnu(B)	CP129369.1	1897339	1898142
GCA_030435935.1	GCA_030435935.1_01929	lsa(E)	ABC-F type ribosomal protection protein Lsa(E)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	EXACTP	494	494	100.00	100.00	494	WP_002294513.1	ABC-F type ribosomal protection protein Lsa(E)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP129369.1	1898196	1899680
GCA_030435935.1	GCA_030435935.1_01933	spw	ANT(9) family aminoglycoside nucleotidyltransferase Spw	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	269	269	100.00	100.00	269	WP_002294509.1	ANT(9) family aminoglycoside nucleotidyltransferase Spw	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP129369.1	1901747	1902556
GCA_030435935.1	GCA_030435935.1_01935	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_002294505.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP129369.1	1903259	1904122
GCA_030435935.1	GCA_030435935.1_01939	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP129369.1	1906695	1908071
GCA_030435935.1	GCA_030435935.1_01945	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP129369.1	1912759	1914198
GCA_030435935.1	GCA_030435935.1_01951	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP129369.1	1917398	1918243
GCA_030435935.1	GCA_030435935.1_01952	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP129369.1	1918350	1920107
GCA_030435935.1	GCA_030435935.1_01953	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP129369.1	1920097	1920477
GCA_030435935.1	GCA_030435935.1_02161	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	142	96.48	74.45	137	WP_204376221.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP129369.1	2118830	2119246
GCA_030435935.1	GCA_030435935.1_02651	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	244	244	100.00	99.59	244	WP_007410443.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP129371.1	1137	1871
GCA_000963275.1	GCA_000963275.1_00630	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	62.02	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JYOW01000001.1	620720	621148
GCA_000963275.1	GCA_000963275.1_01206	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	95.67	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	JYOW01000001.1	1197237	1198973
GCA_000963275.1	GCA_000963275.1_01207	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	97.39	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	JYOW01000001.1	1198975	1200699
GCA_002196905.1	GCA_002196905.1_00324	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	74.96	46.03	478	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	NIPX01000010.1	31429	32871
GCA_900497595.1	GCA_900497595.1_00796	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	92.31	66.67	204	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	UFQO01000002.1	353171	353818
GCA_000222045.2	GCA_000222045.2_01461	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AFQP01000007.1	15634	17028
GCA_001275565.2	GCA_001275565.2_00282	aac(2)-Ic	aminoglycoside N-acetyltransferase AAC(2)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	181	181	100.00	100.00	181	WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	NF000034.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	CP012506.2	312577	313122
GCA_001275565.2	GCA_001275565.2_02090	erm(37)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	150	179	83.80	99.33	150	WP_003900446.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	NA	NA	CP012506.2	2221256	2221708
GCA_001275565.2	GCA_001275565.2_02182	blaC	class A beta-lactamase BlaC	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	307	307	100.00	100.00	307	WP_003410677.1	class A beta-lactamase BlaC	NF041154.1	class A beta-lactamase BlaC	CP012506.2	2321731	2322654
GCA_000464495.1	GCA_000464495.1_01136	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	130	120	100.00	48.85	131	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AOST01000051.1	6981	7373
GCA_023109575.1	GCA_023109575.1_00791	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JALDUP010000002.1	164670	165098
GCA_023109575.1	GCA_023109575.1_01149	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDUP010000003.1	33350	34813
GCA_023109575.1	GCA_023109575.1_01150	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDUP010000003.1	34933	36150
GCA_000738185.1	GCA_000738185.1_01812	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	97.18	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JFCF01000035.1	143805	144659
GCA_934201715.1	GCA_934201715.1_00218	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.81	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	CAKPWY010000001.1	232155	233879
GCA_934201715.1	GCA_934201715.1_00219	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	91.68	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CAKPWY010000001.1	233881	235617
GCA_934201715.1	GCA_934201715.1_00435	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CAKPWY010000002.1	129496	129924
GCA_934201715.1	GCA_934201715.1_00650	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CAKPWY010000003.1	72390	73127
GCA_934201715.1	GCA_934201715.1_00661	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAKPWY010000003.1	83042	84961
GCA_003942365.1	GCA_003942365.1_00253	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJMR01000001.1	244835	246052
GCA_003942365.1	GCA_003942365.1_00254	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJMR01000001.1	246172	247635
GCA_005890235.1	GCA_005890235.1_01342	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	SOQI01000055.1	111951	113168
GCA_005890235.1	GCA_005890235.1_01343	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	SOQI01000055.1	113189	114652
GCA_005890235.1	GCA_005890235.1_01380	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	SOQI01000055.1	145518	147437
GCA_005890235.1	GCA_005890235.1_01503	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.41	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	SOQI01000061.1	13026	14159
GCA_023635085.1	GCA_023635085.1_00160	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAGEOO010000003.1	161239	162879
GCA_023635085.1	GCA_023635085.1_01573	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAGEOO010000003.1	1664513	1666432
GCA_017298975.1	GCA_017298975.1_01054	smdA	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	591	591	100.00	98.48	591	BAF79679.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdA	NA	NA	CP071218.1	1099705	1101480
GCA_017298975.1	GCA_017298975.1_01055	smdB	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	592	592	100.00	98.65	592	BAF79680.1	multidrug efflux ABC transporter permease/ATP-binding subunit SmdB	NA	NA	CP071218.1	1101473	1103251
GCA_017298975.1	GCA_017298975.1_01070	sdeY	multidrug efflux RND transporter permease subunit SdeY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1048	1051	99.43	95.70	1046	BAC77251.1	multidrug efflux RND transporter permease subunit SdeY	NA	NA	CP071218.1	1112541	1115687
GCA_017298975.1	GCA_017298975.1_01956	sdeB	multidrug efflux RND transporter permease subunit SdeB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1047	1047	100.00	99.62	1047	AAO18187.2	multidrug efflux RND transporter permease subunit SdeB	NA	NA	CP071218.1	2018161	2021304
GCA_017298975.1	GCA_017298975.1_01957	sdeA	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	395	395	100.00	99.75	395	AAS55383.1	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	CP071218.1	2021329	2022516
GCA_017298975.1	GCA_017298975.1_02296	blaSRT	SRT/SST family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	378	378	100.00	99.47	378	WP_063864750.1	cephalosporin-hydrolyzing class C beta-lactamase SST-1	NF000423.2	SRT/SST family class C beta-lactamase	CP071218.1	2345830	2346966
GCA_017298975.1	GCA_017298975.1_02529	tet(41)	tetracycline efflux MFS transporter Tet(41)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	388	393	98.73	95.62	388	WP_063855881.1	tetracycline efflux MFS transporter Tet(41)	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP071218.1	2615277	2616443
GCA_017298975.1	GCA_017298975.1_02613	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	91	102	90.20	71.58	95	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP071218.1	2705512	2705787
GCA_017298975.1	GCA_017298975.1_02627	ssmE	multidrug efflux SMR transporter SsmE	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	106	110	96.36	100.00	106	BAF80121.1	multidrug efflux SMR transporter SsmE	NA	NA	CP071218.1	2720915	2721235
GCA_017298975.1	GCA_017298975.1_02729	smfY	multidrug efflux MFS transporter SmfY	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	490	490	100.00	98.37	490	BAE79899.1	multidrug efflux MFS transporter SmfY	NA	NA	CP071218.1	2836701	2838173
GCA_017298975.1	GCA_017298975.1_02876	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	135	139	98.56	67.15	137	WP_004857515.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	CP071218.1	2978267	2978674
GCA_017298975.1	GCA_017298975.1_04304	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	146	146	100.00	100.00	146	WP_033639326.1	aminoglycoside 6-N-acetyltransferase	NF000021.4	aminoglycoside 6-N-acetyltransferase	CP071218.1	4464244	4464684
GCA_017298975.1	GCA_017298975.1_04800	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	300	300	99.67	81.27	299	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	CP071218.1	4987036	4987938
GCA_022136765.1	GCA_022136765.1_01352	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAKNFD010000003.1	145012	146931
GCA_947087535.1	GCA_947087535.1_01157	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CAMUDA010000007.1	24539	25276
GCA_947087535.1	GCA_947087535.1_01167	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_050232631.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CAMUDA010000007.1	35194	37113
GCA_947087535.1	GCA_947087535.1_01457	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CAMUDA010000010.1	56123	58042
GCA_947087535.1	GCA_947087535.1_01460	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	99.80	90.63	491	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CAMUDA010000010.1	59813	61291
GCA_004295525.1	GCA_004295525.1_01422	copP	copper-binding metallochaperone CopP	plus	STRESS	METAL	COPPER	COPPER	BLASTP	66	66	100.00	96.97	66	AAD05936.1	copper-binding metallochaperone CopP	NF033781.1	copper-binding metallochaperone CopP	AP017632.1	1428728	1428928
GCA_003425765.1	GCA_003425765.1_01580	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031692.1	1575383	1576777
GCA_000649085.1	GCA_000649085.1_00141	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JIBS01000001.1	146112	147185
GCA_000649085.1	GCA_000649085.1_00285	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JIBS01000001.1	304586	305878
GCA_000649085.1	GCA_000649085.1_01015	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JIBS01000010.1	185157	185576
GCA_000649085.1	GCA_000649085.1_02081	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JIBS01000018.1	92	472
GCA_000649085.1	GCA_000649085.1_02082	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JIBS01000018.1	462	2219
GCA_000649085.1	GCA_000649085.1_02083	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JIBS01000018.1	2326	3171
GCA_000649085.1	GCA_000649085.1_02089	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JIBS01000019.1	165	899
GCA_022750565.1	GCA_022750565.1_01850	cfr(C)	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(C)	core	AMR	AMR	LINCOSAMIDE/OXAZOLIDINONE/PHENICOL/PLEUROMUTILIN/STREPTOGRAMIN	CHLORAMPHENICOL/CLINDAMYCIN/FLORFENICOL/LINEZOLID/STREPTOGRAMIN/TIAMULIN	BLASTP	416	379	95.78	97.25	363	WP_111690898.1	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(C)	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	QVIH01000006.1	157371	158621
GCA_022750565.1	GCA_022750565.1_01852	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	QVIH01000006.1	160323	161060
GCA_029691795.1	GCA_029691795.1_00079	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.22	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP121480.1	73764	74609
GCA_029691795.1	GCA_029691795.1_00080	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP121480.1	74716	76473
GCA_029691795.1	GCA_029691795.1_00081	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP121480.1	76463	76843
GCA_029691795.1	GCA_029691795.1_01092	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	CP121480.1	1145551	1146192
GCA_029691795.1	GCA_029691795.1_01343	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121480.1	1394128	1395420
GCA_029691795.1	GCA_029691795.1_01652	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP121480.1	1735947	1737236
GCA_029691795.1	GCA_029691795.1_01655	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP121480.1	1739414	1739761
GCA_029691795.1	GCA_029691795.1_01717	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP121480.1	1808740	1809168
GCA_003943175.1	GCA_003943175.1_01009	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJOU01000002.1	422977	424194
GCA_003943175.1	GCA_003943175.1_01010	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJOU01000002.1	424314	425777
GCA_003355295.1	GCA_003355295.1_01009	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.23	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP031332.1	1008270	1009796
GCA_003355295.1	GCA_003355295.1_01201	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.13	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP031332.1	1212414	1213982
GCA_003355295.1	GCA_003355295.1_01203	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP031332.1	1214807	1215439
GCA_003355295.1	GCA_003355295.1_01204	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	98.06	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP031332.1	1215843	1217081
GCA_003355295.1	GCA_003355295.1_01459	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP031332.1	1469133	1470512
GCA_003184385.1	GCA_003184385.1_00154	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	PARTIALP	318	464	68.53	97.17	318	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP029620.1	152924	153880
GCA_016889745.1	GCA_016889745.1_03049	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	296	300	96.00	74.74	289	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP069532.1	3792885	3793775
GCA_016889745.1	GCA_016889745.1_03691	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	94.58	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP069532.1	4483369	4484700
GCA_000010465.1	GCA_000010465.1_00086	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	AP009351.1	103046	104404
GCA_000010465.1	GCA_000010465.1_00360	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	AP009351.1	377048	378403
GCA_000010465.1	GCA_000010465.1_00398	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	AP009351.1	411632	412243
GCA_000010465.1	GCA_000010465.1_01638	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	AP009351.1	1668169	1668921
GCA_000010465.1	GCA_000010465.1_01811	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	AP009351.1	1861621	1862913
GCA_000010465.1	GCA_000010465.1_01855	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	AP009351.1	1900155	1900871
GCA_000010465.1	GCA_000010465.1_01858	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	AP009351.1	1902646	1903368
GCA_000010465.1	GCA_000010465.1_01859	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	235	100.00	98.74	238	ABD31004.1	serine protease SplA	NA	NA	AP009351.1	1903493	1904209
GCA_000010465.1	GCA_000010465.1_01869	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	AP009351.1	1915858	1916841
GCA_000010465.1	GCA_000010465.1_01870	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	AP009351.1	1916843	1917778
GCA_000010465.1	GCA_000010465.1_02096	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	AP009351.1	2089433	2089783
GCA_000010465.1	GCA_000010465.1_02101	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	AP009351.1	2091997	2092488
GCA_000010465.1	GCA_000010465.1_02105	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	257	257	100.00	98.05	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	AP009351.1	2094197	2094970
GCA_000010465.1	GCA_000010465.1_02178	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	AP009351.1	2151151	2151285
GCA_000010465.1	GCA_000010465.1_02325	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	AP009351.1	2303758	2305200
GCA_000010465.1	GCA_000010465.1_02501	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	AP009351.1	2457367	2457786
GCA_000010465.1	GCA_000010465.1_02588	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	AP009351.1	2547025	2547990
GCA_000010465.1	GCA_000010465.1_02589	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	AP009351.1	2548558	2549505
GCA_000010465.1	GCA_000010465.1_02590	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	AP009351.1	2549507	2550484
GCA_000010465.1	GCA_000010465.1_02666	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1499	1115	61.43	99.42	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	AP009351.1	2627840	2632339
GCA_000010465.1	GCA_000010465.1_02812	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	AP009351.1	2790267	2791796
GCA_000010465.1	GCA_000010465.1_02846	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	AP009351.1	2835130	2836182
GCA_028328045.1	GCA_028328045.1_00436	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMNJ010000019.1	15661	17580
GCA_028328045.1	GCA_028328045.1_01191	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.06	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAQMNJ010000038.1	17022	18500
GCA_028328045.1	GCA_028328045.1_01576	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	152	243	56.38	98.54	137	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	NA	JAQMNJ010000005.1	30	488
GCA_001008205.1	GCA_001008205.1_01575	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LCTK01000033.1	40338	41732
GCA_028326425.1	GCA_028326425.1_01698	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMMZ010000007.1	4663	5394
GCA_028326425.1	GCA_028326425.1_01845	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMMZ010000009.1	20732	22651
GCA_000160135.1	GCA_000160135.1_01576	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	GG729934.1	646526	648445
GCA_000411235.1	GCA_000411235.1_00020	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KE150404.1	19195	20976
GCA_000411235.1	GCA_000411235.1_00553	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	561	639	87.79	100.00	561	WP_000691759.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KE150404.1	640054	641739
GCA_000411235.1	GCA_000411235.1_02011	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.48	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KE150404.1	2287920	2288774
GCA_001553855.1	GCA_001553855.1_01894	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	LQWV01000039.1	157787	158215
GCA_018292145.1	GCA_018292145.1_02872	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	98.75	641	WP_063856409.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP072254.1	3313778	3315703
GCA_003943715.1	GCA_003943715.1_00618	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	124	142	84.51	60.83	120	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJMQ01000002.1	74773	75147
GCA_003943715.1	GCA_003943715.1_00665	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	RJMQ01000002.1	114203	115843
GCA_030486605.1	GCA_030486605.1_00875	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAUKFN010000002.1	107863	108717
GCA_030486605.1	GCA_030486605.1_00881	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.26	470	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAUKFN010000002.1	116535	117959
GCA_030486605.1	GCA_030486605.1_00882	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	217	218	86.70	45.64	195	BAA82061.2	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	JAUKFN010000002.1	117993	118646
GCA_003626375.1	GCA_003626375.1_01390	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	QZHM01000006.1	103023	103964
GCA_022832915.1	GCA_022832915.1_00058	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP094865.1	62786	64792
GCA_022832915.1	GCA_022832915.1_00097	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP094865.1	108288	109577
GCA_022832915.1	GCA_022832915.1_00100	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP094865.1	111755	112102
GCA_022832915.1	GCA_022832915.1_00173	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP094865.1	195921	196349
GCA_022832915.1	GCA_022832915.1_00421	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP094865.1	475719	477158
GCA_022832915.1	GCA_022832915.1_00932	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	181	281	64.41	93.37	181	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	NA	CP094865.1	958134	958679
GCA_022832915.1	GCA_022832915.1_00933	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP094865.1	958786	960543
GCA_022832915.1	GCA_022832915.1_00934	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP094865.1	960533	960913
GCA_022832915.1	GCA_022832915.1_01963	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP094865.1	2015530	2016027
GCA_022832915.1	GCA_022832915.1_02445	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	1024	1024	100.00	99.80	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA	CP094866.1	14528	17602
GCA_022832915.1	GCA_022832915.1_02452	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP094866.1	26202	26762
GCA_022832915.1	GCA_022832915.1_02453	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP094866.1	26946	28490
GCA_022832915.1	GCA_022832915.1_02467	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	522	522	100.00	100.00	522	WP_032492560.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	CP094868.1	1981	3549
GCA_022832915.1	GCA_022832915.1_02478	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	239	244	100.00	97.54	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	CP094871.1	1292	2011
GCA_030176555.1	GCA_030176555.1_01978	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNUP010000006.1	128269	129123
GCA_020161895.1	GCA_020161895.1_01259	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.83	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JAIUSU010000027.1	24	1805
GCA_020161895.1	GCA_020161895.1_01618	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAIUSU010000004.1	183797	184972
GCA_022346285.1	GCA_022346285.1_01119	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.40	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAKRDF010000022.1	9244	10668
GCA_022346285.1	GCA_022346285.1_01536	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JAKRDF010000034.1	622	1041
GCA_022346285.1	GCA_022346285.1_01537	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAKRDF010000034.1	1041	1877
GCA_022346285.1	GCA_022346285.1_01539	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAKRDF010000034.1	2081	3256
GCA_022346285.1	GCA_022346285.1_01542	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	BLASTP	276	279	98.92	99.64	276	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JAKRDF010000035.1	1699	2529
GCA_022346285.1	GCA_022346285.1_01802	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JAKRDF010000043.1	88	903
GCA_022346285.1	GCA_022346285.1_01908	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	94.37	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDF010000004.1	91612	92466
GCA_023148185.1	GCA_023148185.1_00390	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	266	266	100.00	63.53	266	WP_032488512.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAHXOD010000011.1	49840	50640
GCA_023148185.1	GCA_023148185.1_00392	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JAHXOD010000011.1	52277	53242
GCA_023148185.1	GCA_023148185.1_01333	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JAHXOD010000003.1	19025	20950
GCA_000189435.3	GCA_000189435.3_00026	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	98.37	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP024649.1	29390	30310
GCA_000189435.3	GCA_000189435.3_00031	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	96.17	235	ABD31004.1	serine protease SplA	NA	NA	CP024649.1	35406	36113
GCA_000189435.3	GCA_000189435.3_00032	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	95.00	240	ABD31003.1	serine protease SplB	NA	NA	CP024649.1	36238	36960
GCA_000189435.3	GCA_000189435.3_00035	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.90	238	ABD30999.1	serine protease SplE	NA	NA	CP024649.1	38642	39358
GCA_000189435.3	GCA_000189435.3_00110	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP024649.1	130380	131738
GCA_000189435.3	GCA_000189435.3_00372	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.45	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP024649.1	401076	402431
GCA_000189435.3	GCA_000189435.3_00419	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	95.57	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP024649.1	441564	442175
GCA_000189435.3	GCA_000189435.3_01766	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.59	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP024649.1	1836544	1837836
GCA_000189435.3	GCA_000189435.3_02019	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP024649.1	2055965	2056099
GCA_000189435.3	GCA_000189435.3_02164	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	97.08	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP024649.1	2209156	2210598
GCA_000189435.3	GCA_000189435.3_02205	ednB	epidermal cell differentiation inhibitor EdnB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	247	251	98.41	95.55	247	AXN77488.1	epidermal cell differentiation inhibitor EdnB	NA	NA	CP024649.1	2252804	2253547
GCA_000189435.3	GCA_000189435.3_02423	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP024649.1	2451165	2452130
GCA_000189435.3	GCA_000189435.3_02424	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP024649.1	2452698	2453645
GCA_000189435.3	GCA_000189435.3_02426	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	248	325	76.31	97.18	248	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP024649.1	2453877	2454623
GCA_000189435.3	GCA_000189435.3_02639	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP024649.1	2680250	2681779
GCA_000189435.3	GCA_000189435.3_02674	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	260	350	74.29	99.62	260	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP024649.1	2724579	2725361
GCA_000211075.1	GCA_000211075.1_02245	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	FQ312039.1	2084387	2085586
GCA_900477975.1	GCA_900477975.1_00892	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LS483459.1	1020738	1022159
GCA_900477975.1	GCA_900477975.1_00897	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	LS483459.1	1026619	1027473
GCA_900477975.1	GCA_900477975.1_00929	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	LS483459.1	1055219	1056394
GCA_900477975.1	GCA_900477975.1_01709	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	483	513	94.15	96.69	483	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	LS483459.1	1943706	1945157
GCA_900477975.1	GCA_900477975.1_01913	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	LS483459.1	2177010	2178791
GCA_900477975.1	GCA_900477975.1_01916	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	LS483459.1	2182304	2184085
GCA_001059665.1	GCA_001059665.1_00164	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JULW01000095.1	1446	3365
GCA_001059665.1	GCA_001059665.1_00573	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JULW01000115.1	1556	2410
GCA_001059665.1	GCA_001059665.1_00867	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JULW01000129.1	1643	3424
GCA_943913865.1	GCA_943913865.1_00975	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CALTZV010000012.1	64536	65501
GCA_943913865.1	GCA_943913865.1_01306	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	288	266	100.00	98.87	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CALTZV010000019.1	27434	28300
GCA_943913865.1	GCA_943913865.1_02326	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	BLASTP	261	264	98.86	100.00	261	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CALTZV010000070.1	1583	2368
GCA_943913865.1	GCA_943913865.1_02327	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	176	180	97.78	99.43	176	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CALTZV010000070.1	2470	3000
GCA_943913865.1	GCA_943913865.1_02328	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CALTZV010000070.1	3009	3917
GCA_943913865.1	GCA_943913865.1_02380	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CALTZV010000077.1	3320	5239
GCA_002055965.1	GCA_002055965.1_00263	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	267	268	99.63	62.59	270	WP_003328240.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	CP020102.1	228593	229396
GCA_002055965.1	GCA_002055965.1_00305	mphK	macrolide 2-phosphotransferase MphK	core	AMR	AMR	MACROLIDE	TELITHROMYCIN/TYLOSIN	EXACTP	306	306	100.00	100.00	306	WP_003246254.1	macrolide 2-phosphotransferase MphK	NA	NA	CP020102.1	275882	276802
GCA_002055965.1	GCA_002055965.1_00646	vmlR	ABC-F type ribosomal protection protein VmlR	core	AMR	AMR	LINCOSAMIDE/PLEUROMUTILIN/STREPTOGRAMIN	LINCOMYCIN/TIAMULIN/VIRGINIAMYCIN M	EXACTP	547	547	100.00	100.00	547	WP_003234144.1	ABC-F type ribosomal protection protein VmlR	NA	NA	CP020102.1	604777	606420
GCA_002055965.1	GCA_002055965.1_01965	fosM	FosM family fosfomycin resistance protein	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	144	140	100.00	75.00	140	WP_102272729.1	FosM family fosfomycin resistance protein	NF038306.1	FosM family fosfomycin resistance protein	CP020102.1	1916695	1917129
GCA_002055965.1	GCA_002055965.1_02070	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	309	98.06	66.99	306	WP_011053164.1	class A beta-lactamase	NF012167.0	class A beta-lactamase	CP020102.1	2048565	2049485
GCA_002055965.1	GCA_002055965.1_02814	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	139	139	100.00	100.00	139	CAB14519.1	thioredoxin-dependent arsenate reductase	NA	NA	CP020102.1	2655343	2655762
GCA_002055965.1	GCA_002055965.1_02815	acr3	arsenite efflux transporter Acr3	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	346	346	100.00	100.00	346	CAB14520.2	arsenite efflux transporter Acr3	NA	NA	CP020102.1	2655774	2656814
GCA_002055965.1	GCA_002055965.1_02916	aadK	aminoglycoside 6-adenylyltransferase AadK	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	284	284	100.00	100.00	284	WP_003229862.1	aminoglycoside 6-adenylyltransferase AadK	NF000312.1	aminoglycoside 6-adenylyltransferase AadK	CP020102.1	2735700	2736554
GCA_002055965.1	GCA_002055965.1_04406	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	173	173	100.00	100.00	173	WP_003242546.1	streptothricin N-acetyltransferase SatA	NA	NA	CP020102.1	4185199	4185720
GCA_002055965.1	GCA_002055965.1_04409	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_003242953.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP020102.1	4187720	4189096
GCA_000767075.1	GCA_000767075.1_01614	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP009610.1	1608867	1610261
GCA_001679045.1	GCA_001679045.1_00787	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.34	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LYCK01000012.1	104303	105697
GCA_001679045.1	GCA_001679045.1_01340	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LYCK01000013.1	199419	201059
GCA_003425585.1	GCA_003425585.1_01604	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP031688.1	1598548	1599942
GCA_017893965.1	GCA_017893965.1_01148	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	215	221	96.83	65.42	214	WP_005164767.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP054142.1	1301739	1302386
GCA_023109395.1	GCA_023109395.1_00651	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALGPQ010000001.1	663071	664990
GCA_016747995.1	GCA_016747995.1_00368	copP	copper-binding metallochaperone CopP	plus	STRESS	METAL	COPPER	COPPER	BLASTP	67	66	100.00	95.45	66	AAD05936.1	copper-binding metallochaperone CopP	NF033781.1	copper-binding metallochaperone CopP	CP051290.1	367469	367672
GCA_029843895.1	GCA_029843895.1_03819	tmexC	multidrug efflux RND transporter periplasmic adaptor subunit TMexC	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	387	387	100.00	98.71	387	WP_034039546.1	multidrug efflux RND transporter periplasmic adaptor subunit TMexC3	NA	NA	JAOCJE010000001.1	3811530	3812693
GCA_029843895.1	GCA_029843895.1_03820	tmexD2	multidrug efflux RND transporter permease subunit TMexD2	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	ALLELEP	1044	1044	100.00	100.00	1044	WP_027591160.1	multidrug efflux RND transporter permease subunit TMexD2	NA	NA	JAOCJE010000001.1	3812709	3815843
GCA_029843895.1	GCA_029843895.1_03821	toprJ1	multidrug efflux transporter outer membrane subunit TOprJ1	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	ALLELEP	477	477	100.00	100.00	477	WP_003152694.1	multidrug efflux transporter outer membrane subunit TOprJ1	NA	NA	JAOCJE010000001.1	3815848	3817281
GCA_029843895.1	GCA_029843895.1_04091	blaVIM-4	subclass B1 metallo-beta-lactamase VIM-4	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	266	266	100.00	100.00	266	WP_032492008.1	subclass B1 metallo-beta-lactamase VIM-4	NF012100.0	VIM family subclass B1 metallo-beta-lactamase	JAOCJE010000001.1	4088278	4089078
GCA_029843895.1	GCA_029843895.1_04093	smr	multidrug efflux SMR transporter Smr	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	105	105	100.00	100.00	105	WP_032491400.1	multidrug efflux SMR transporter Smr	NF000280.1	multidrug efflux SMR transporter Smr	JAOCJE010000001.1	4089778	4090095
GCA_029843895.1	GCA_029843895.1_04095	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JAOCJE010000001.1	4091981	4092820
GCA_029843895.1	GCA_029843895.1_04104	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	94.87	78	AAA88371.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	JAOCJE010000001.1	4100952	4101188
GCA_029843895.1	GCA_029843895.1_04105	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	95.04	121	AAA88370.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	JAOCJE010000001.1	4101185	4101550
GCA_029843895.1	GCA_029843895.1_04106	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	91.27	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JAOCJE010000001.1	4101568	4103253
GCA_029843895.1	GCA_029843895.1_04107	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	96.70	91	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	JAOCJE010000001.1	4103325	4103600
GCA_029843895.1	GCA_029843895.1_04108	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	116	116	100.00	100.00	116	CAA70196.1	mercuric transport protein MerT	NA	NA	JAOCJE010000001.1	4103616	4103966
GCA_029843895.1	GCA_029843895.1_04109	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	97.92	144	AAA98221.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	JAOCJE010000001.1	4104038	4104472
GCA_029843895.1	GCA_029843895.1_04166	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	412	414	100.00	75.85	414	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	JAOCJE010000001.1	4160266	4161504
GCA_029843895.1	GCA_029843895.1_04522	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	92.12	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	JAOCJE010000001.1	4522158	4522769
GCA_029843895.1	GCA_029843895.1_04523	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	95.25	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	JAOCJE010000001.1	4522866	4523753
GCA_029843895.1	GCA_029843895.1_04524	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	93.09	304	APX31172.1	heat resistance protein YfdX1	NA	NA	JAOCJE010000001.1	4523856	4524770
GCA_029843895.1	GCA_029843895.1_04525	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	BLASTP	152	152	100.00	97.37	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	JAOCJE010000001.1	4524793	4525251
GCA_029843895.1	GCA_029843895.1_04528	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.26	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	JAOCJE010000001.1	4528631	4531480
GCA_013267715.1	GCA_013267715.1_01574	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP054017.1	1516818	1518110
GCA_000972725.1	GCA_000972725.1_00032	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP011116.1	33979	35985
GCA_000972725.1	GCA_000972725.1_00051	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	431	429	100.00	91.86	430	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP011116.1	52133	53428
GCA_000972725.1	GCA_000972725.1_00133	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.02	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP011116.1	128456	129748
GCA_000972725.1	GCA_000972725.1_01428	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG	CP011116.1	1363522	1364019
GCA_000972725.1	GCA_000972725.1_01702	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP011116.1	1630842	1632281
GCA_000972725.1	GCA_000972725.1_02099	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	PARTIALP	140	213	64.79	100.00	138	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NA	NA	CP011116.1	2022855	2023277
GCA_000972725.1	GCA_000972725.1_02333	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP011116.1	2239780	2241246
GCA_000972725.1	GCA_000972725.1_02334	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP011116.1	2241345	2242244
GCA_000972725.1	GCA_000972725.1_02347	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP011116.1	2254440	2254982
GCA_000972725.1	GCA_000972725.1_02348	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	PARTIALP	202	264	76.52	100.00	202	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	CP011116.1	2255262	2255870
GCA_000972725.1	GCA_000972725.1_02590	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP011116.1	2480984	2481829
GCA_000972725.1	GCA_000972725.1_02591	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP011116.1	2481936	2483693
GCA_000972725.1	GCA_000972725.1_02592	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP011116.1	2483683	2484063
GCA_000972725.1	GCA_000972725.1_02597	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP011116.1	2488107	2488667
GCA_000972725.1	GCA_000972725.1_02598	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP011116.1	2488851	2490395
GCA_011525585.1	GCA_011525585.1_01678	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	WVRR01000038.1	49283	50137
GCA_011525585.1	GCA_011525585.1_02261	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	931	949	97.89	99.14	929	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	WVRR01000045.1	4586	7381
GCA_011525585.1	GCA_011525585.1_02262	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	97.88	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	WVRR01000045.1	7487	8056
GCA_011525585.1	GCA_011525585.1_02288	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	WVRR01000027.1	4363	4599
GCA_011525585.1	GCA_011525585.1_02289	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	WVRR01000027.1	4596	4961
GCA_011525585.1	GCA_011525585.1_02290	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	93.23	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	WVRR01000027.1	4979	6664
GCA_011525585.1	GCA_011525585.1_02291	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	WVRR01000027.1	6703	7128
GCA_011525585.1	GCA_011525585.1_02292	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	85.71	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	WVRR01000027.1	7156	7431
GCA_011525585.1	GCA_011525585.1_02293	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	86	116	74.14	97.67	86	CAA70196.1	mercuric transport protein MerT	NA	NA	WVRR01000027.1	7447	7707
GCA_000302515.1	GCA_000302515.1_00794	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP003877.1	817496	817918
GCA_001813685.1	GCA_001813685.1_00093	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV813687.1	1743	2597
GCA_001813685.1	GCA_001813685.1_00096	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	640	92.97	100.00	595	WP_063856422.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV813687.1	4726	6513
GCA_001813685.1	GCA_001813685.1_01667	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.65	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV813706.1	326432	328072
GCA_008330765.1	GCA_008330765.1_00453	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.64	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP021518.1	458558	459937
GCA_008330765.1	GCA_008330765.1_01163	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP021518.1	1206610	1207515
GCA_008330765.1	GCA_008330765.1_01281	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	97.57	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP021518.1	1338480	1339718
GCA_008330765.1	GCA_008330765.1_01282	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP021518.1	1340122	1340754
GCA_008330765.1	GCA_008330765.1_01284	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	97.32	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP021518.1	1341579	1343147
GCA_008330765.1	GCA_008330765.1_01479	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP021518.1	1549542	1551068
GCA_001838615.1	GCA_001838615.1_00128	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	KV837949.1	32100	32522
GCA_023110315.1	GCA_023110315.1_00341	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JALDVU010000001.1	212468	213685
GCA_023110315.1	GCA_023110315.1_00342	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	487	487	100.00	99.79	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JALDVU010000001.1	213805	215268
GCA_023110315.1	GCA_023110315.1_00479	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	JALDVU010000001.1	356027	357226
GCA_023110315.1	GCA_023110315.1_00796	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALDVU010000002.1	57790	59448
GCA_023110315.1	GCA_023110315.1_01307	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JALDVU010000003.1	194425	196344
GCA_023110315.1	GCA_023110315.1_01321	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.39	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JALDVU010000003.1	209459	210937
GCA_022688985.1	GCA_022688985.1_00118	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.42	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCYH010000012.1	14958	16502
GCA_022688985.1	GCA_022688985.1_00119	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCYH010000012.1	16685	17245
GCA_022688985.1	GCA_022688985.1_00288	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCYH010000016.1	11910	13202
GCA_022688985.1	GCA_022688985.1_00292	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCYH010000016.1	16885	17232
GCA_022688985.1	GCA_022688985.1_01243	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JALCYH010000021.1	1625	3004
GCA_022688985.1	GCA_022688985.1_01251	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003264.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JALCYH010000023.1	769	1503
GCA_022688985.1	GCA_022688985.1_01564	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCYH010000002.1	287506	288798
GCA_003598205.1	GCA_003598205.1_00758	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	PTTJ01000069.1	55975	56403
GCA_003598205.1	GCA_003598205.1_01329	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	100.00	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	PTTJ01000091.1	13109	14242
GCA_031158635.1	GCA_031158635.1_00427	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	45.24	126	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAVIFE010000012.1	2040	2450
GCA_000442105.1	GCA_000442105.1_00792	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	AUTU01000012.1	40798	42723
GCA_000194945.1	GCA_000194945.1_01563	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	GL878509.1	101675	103333
GCA_030216785.1	GCA_030216785.1_01402	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.70	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JASOMP010000035.1	7809	9230
GCA_030216785.1	GCA_030216785.1_01406	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.59	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASOMP010000035.1	10955	11809
GCA_030216785.1	GCA_030216785.1_01599	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.49	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASOMP010000042.1	99	1880
GCA_030216785.1	GCA_030216785.1_01739	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASOMP010000004.1	141076	142251
GCA_030216785.1	GCA_030216785.1_01741	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JASOMP010000004.1	142455	143291
GCA_030216785.1	GCA_030216785.1_01742	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JASOMP010000004.1	143291	144094
GCA_030216785.1	GCA_030216785.1_01747	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JASOMP010000054.1	88	903
GCA_003490655.1	GCA_003490655.1_00469	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.69	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQGV01000001.1	502394	503788
GCA_000667805.1	GCA_000667805.1_00284	aac(2)-Ic	aminoglycoside N-acetyltransferase AAC(2)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	181	181	100.00	100.00	181	WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	NF000034.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	KK339370.1	314309	314854
GCA_000667805.1	GCA_000667805.1_02155	erm(37)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	150	179	83.80	99.33	150	WP_003900446.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	NA	NA	KK339370.1	2239641	2240093
GCA_000667805.1	GCA_000667805.1_02246	blaC	class A beta-lactamase BlaC	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	307	307	100.00	100.00	307	WP_003410677.1	class A beta-lactamase BlaC	NF041154.1	class A beta-lactamase BlaC	KK339370.1	2329323	2330246
GCA_001337855.1	GCA_001337855.1_01270	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691743.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CHTX01000017.1	15648	17567
GCA_001337855.1	GCA_001337855.1_01677	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	98.48	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CHTX01000030.1	12221	13642
GCA_014266085.1	GCA_014266085.1_00068	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACMVD010000010.1	62356	62757
GCA_014266085.1	GCA_014266085.1_00069	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVD010000010.1	62775	64064
GCA_014266085.1	GCA_014266085.1_00070	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	96.15	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JACMVD010000010.1	64064	64378
GCA_014266085.1	GCA_014266085.1_00134	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JACMVD010000013.1	853	1200
GCA_014266085.1	GCA_014266085.1_00138	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.74	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVD010000013.1	4883	6175
GCA_014266085.1	GCA_014266085.1_00139	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACMVD010000013.1	6192	6587
GCA_014266085.1	GCA_014266085.1_01173	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.16	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACMVD010000006.1	60414	61703
GCA_001189535.1	GCA_001189535.1_00977	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	462	561	82.35	45.82	467	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP012070.1	1028025	1029413
GCA_022689005.1	GCA_022689005.1_00245	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	69.57	138	WP_085562382.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JALCYE010000017.1	4366	4785
GCA_022689005.1	GCA_022689005.1_00838	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JALCYE010000023.1	122	445
GCA_022689005.1	GCA_022689005.1_00841	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	JALCYE010000023.1	2415	3158
GCA_022689005.1	GCA_022689005.1_01161	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCYE010000002.1	317141	318433
GCA_006542645.1	GCA_006542645.1_02099	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	296	98.99	42.66	293	WP_005827792.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	AP019734.1	2442900	2443805
GCA_002096735.1	GCA_002096735.1_00286	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	99.75	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	NCVC01000017.1	270724	271941
GCA_002096735.1	GCA_002096735.1_00287	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	NCVC01000017.1	272061	273524
GCA_002096735.1	GCA_002096735.1_00415	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	98.50	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	NCVC01000017.1	421999	423198
GCA_001679405.1	GCA_001679405.1_00708	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	LZMW01000013.1	151927	153567
GCA_001679405.1	GCA_001679405.1_00710	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	46.72	122	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LZMW01000013.1	156229	156651
GCA_018141845.1	GCA_018141845.1_00561	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.46	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP073340.1	568762	570240
GCA_003354665.1	GCA_003354665.1_00035	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721309.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP022902.1	39057	41063
GCA_003354665.1	GCA_003354665.1_00036	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP022902.1	41163	42149
GCA_003354665.1	GCA_003354665.1_00051	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	CP022902.1	53825	54619
GCA_003354665.1	GCA_003354665.1_00052	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4	CP022902.1	54712	55254
GCA_003354665.1	GCA_003354665.1_00053	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP022902.1	55251	56159
GCA_003354665.1	GCA_003354665.1_00061	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	459	459	100.00	99.78	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP022902.1	61306	62685
GCA_003354665.1	GCA_003354665.1_00067	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	128	128	100.00	100.00	128	ADA79992.1	mercuric transport protein MerT	NA	NA	CP022902.1	67162	67548
GCA_003354665.1	GCA_003354665.1_00068	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP022902.1	67606	69249
GCA_003354665.1	GCA_003354665.1_00069	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	216	216	100.00	100.00	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP022902.1	69331	69981
GCA_003354665.1	GCA_003354665.1_00130	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	99.78	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP022902.1	140531	141889
GCA_003354665.1	GCA_003354665.1_00334	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP022902.1	371287	372642
GCA_003354665.1	GCA_003354665.1_00373	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP022902.1	405871	406482
GCA_003354665.1	GCA_003354665.1_00840	sek	staphylococcal enterotoxin type K	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	242	242	100.00	100.00	242	AAW36439.1	staphylococcal enterotoxin type K	NA	NA	CP022902.1	871875	872603
GCA_003354665.1	GCA_003354665.1_00841	seq	staphylococcal enterotoxin type Q	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	149	242	58.68	100.00	142	EYN56163.1	staphylococcal enterotoxin type Q	NA	NA	CP022902.1	872907	873356
GCA_003354665.1	GCA_003354665.1_00861	seb	staphylococcal enterotoxin type B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	AAA88550.1	staphylococcal enterotoxin type B	NA	NA	CP022902.1	883553	884353
GCA_003354665.1	GCA_003354665.1_01650	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	234	250	93.60	96.15	234	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP022902.1	1692181	1692885
GCA_003354665.1	GCA_003354665.1_01823	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP022902.1	1885395	1886687
GCA_003354665.1	GCA_003354665.1_01868	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP022902.1	1925024	1925740
GCA_003354665.1	GCA_003354665.1_01871	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP022902.1	1927515	1928237
GCA_003354665.1	GCA_003354665.1_01872	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	235	100.00	98.74	238	ABD31004.1	serine protease SplA	NA	NA	CP022902.1	1928362	1929078
GCA_003354665.1	GCA_003354665.1_01882	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP022902.1	1940727	1941710
GCA_003354665.1	GCA_003354665.1_01883	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP022902.1	1941712	1942647
GCA_003354665.1	GCA_003354665.1_02125	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP022902.1	2136304	2136438
GCA_003354665.1	GCA_003354665.1_02275	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP022902.1	2291573	2293015
GCA_003354665.1	GCA_003354665.1_02452	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP022902.1	2446574	2446993
GCA_003354665.1	GCA_003354665.1_02539	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP022902.1	2536226	2537191
GCA_003354665.1	GCA_003354665.1_02540	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP022902.1	2537759	2538706
GCA_003354665.1	GCA_003354665.1_02541	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP022902.1	2538708	2539685
GCA_003354665.1	GCA_003354665.1_02646	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP022902.1	2653131	2654570
GCA_003354665.1	GCA_003354665.1_02770	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP022902.1	2784938	2786467
GCA_003354665.1	GCA_003354665.1_02790	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP022902.1	2811466	2813385
GCA_003354665.1	GCA_003354665.1_02823	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP022902.1	2847294	2848346
GCA_005503595.1	GCA_005503595.1_00225	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	88.81	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	SCNE01000011.1	76923	77816
GCA_005503595.1	GCA_005503595.1_00844	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	122	102	100.00	67.74	124	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	SCNE01000001.1	219220	219588
GCA_005503595.1	GCA_005503595.1_01717	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	HMM	143	141	100.00	78.01	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	SCNE01000002.1	210747	211178
GCA_005503595.1	GCA_005503595.1_01753	iroB	salmochelin biosynthesis C-glycosyltransferase IroB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	371	371	100.00	92.45	371	EOW04219.1	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	SCNE01000002.1	255012	256127
GCA_005503595.1	GCA_005503595.1_01754	iroC	salmochelin/enterobactin export ABC transporter IroC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1219	1219	99.75	91.04	1216	AUH19662.1	salmochelin/enterobactin export ABC transporter IroC	NA	NA	SCNE01000002.1	256269	259928
GCA_005503595.1	GCA_005503595.1_01757	iroN	siderophore salmochelin receptor IroN	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	724	725	100.00	93.93	725	AAN76093.1	siderophore salmochelin receptor IroN	NA	NA	SCNE01000002.1	262344	264518
GCA_005503595.1	GCA_005503595.1_03116	fosA	FosA/FosA2 family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	141	141	100.00	96.45	141	WP_038415208.1	fosfomycin resistance glutathione transferase FosA	NF000026.1	FosA/FosA2 family fosfomycin resistance glutathione transferase	SCNE01000004.1	325307	325732
GCA_005503595.1	GCA_005503595.1_03281	ampC-Ecan	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	381	381	100.00	99.21	381	WP_006178946.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	NF041666.1	CMY2-MIR-ACT-EC family cephalosporin-hydrolyzing class C beta-lactamase	SCNE01000004.1	495548	496693
GCA_001656095.1	GCA_001656095.1_01569	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	LXHT01000018.1	1401	2342
GCA_900475995.1	GCA_900475995.1_01604	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LS483438.1	1599510	1600904
GCA_002901875.1	GCA_002901875.1_00296	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	100.00	111	ADA79992.1	mercuric transport protein MerT	NA	NA	PPQG01000013.1	3566	3901
GCA_002901875.1	GCA_002901875.1_00297	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	547	547	100.00	99.82	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	PPQG01000013.1	3959	5602
GCA_002901875.1	GCA_002901875.1_00298	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	PPQG01000013.1	5684	6334
GCA_002901875.1	GCA_002901875.1_01215	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	PPQG01000004.1	53583	54428
GCA_002901875.1	GCA_002901875.1_01216	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	PPQG01000004.1	54535	56292
GCA_002901875.1	GCA_002901875.1_01217	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	PPQG01000004.1	56282	56662
GCA_002901875.1	GCA_002901875.1_01285	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	PPQG01000036.1	3200	3547
GCA_002901875.1	GCA_002901875.1_01288	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.21	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPQG01000036.1	5725	7014
GCA_002901875.1	GCA_002901875.1_02197	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	PPQG01000057.1	52054	52482
GCA_002901875.1	GCA_002901875.1_02250	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	PPQG01000008.1	2725	4104
GCA_900454235.1	GCA_900454235.1_00288	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	95.72	304	APX31172.1	heat resistance protein YfdX1	NA	NA	UGSA01000003.1	100825	101739
GCA_900454235.1	GCA_900454235.1_00289	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	91.19	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	UGSA01000003.1	101842	102729
GCA_900454235.1	GCA_900454235.1_02729	bepE	multidrug efflux RND transporter permease subunit BepE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1049	1051	99.71	94.37	1048	AAN29241.1	multidrug efflux RND transporter permease subunit BepE	NA	NA	UGSA01000001.1	393935	397084
GCA_900454235.1	GCA_900454235.1_03260	blaOCH	OCH family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	390	390	100.00	99.74	390	WP_063860890.1	extended-spectrum class C beta-lactamase OCH-3	NF000264.2	OCH family extended-spectrum class C beta-lactamase	UGSA01000001.1	916767	917939
GCA_900454235.1	GCA_900454235.1_03961	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	395	391	97.95	55.84	385	WP_063856077.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	UGSA01000001.1	1595797	1596984
GCA_900454235.1	GCA_900454235.1_04609	cml	Cml family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	397	397	100.00	92.19	397	WP_061345584.1	Cml family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	UGSA01000001.1	2215644	2216837
GCA_900454235.1	GCA_900454235.1_04625	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	266	266	100.00	74.06	266	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	UGSA01000001.1	2232449	2233249
GCA_003438095.1	GCA_003438095.1_01417	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	QSTD01000014.1	17167	18012
GCA_003438095.1	GCA_003438095.1_01418	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	QSTD01000014.1	18119	19876
GCA_003438095.1	GCA_003438095.1_01419	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	QSTD01000014.1	19866	20246
GCA_003438095.1	GCA_003438095.1_01429	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.68	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	QSTD01000015.1	10847	12139
GCA_003438095.1	GCA_003438095.1_01433	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	QSTD01000015.1	15840	16187
GCA_003438095.1	GCA_003438095.1_01794	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	QSTD01000002.1	287235	288527
GCA_003438095.1	GCA_003438095.1_01823	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	488	488	100.00	100.00	488	WP_002447408.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	QSTD01000020.1	1700	3166
GCA_003438095.1	GCA_003438095.1_01828	catA	type A-7 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	215	215	100.00	97.21	215	WP_002489529.1	type A-7 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	QSTD01000021.1	1651	2298
GCA_003438095.1	GCA_003438095.1_01832	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	QSTD01000023.1	41	526
GCA_000378725.1	GCA_000378725.1_00294	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	91.26	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KB900368.1	6185	7663
GCA_000378725.1	GCA_000378725.1_00335	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KB900368.1	45130	47049
GCA_000468635.1	GCA_000468635.1_00388	nimI	5-nitroimidazole reductase NimI	core	AMR	AMR	NITROIMIDAZOLE	NITROIMIDAZOLE	BLASTP	161	172	93.60	100.00	161	WP_021588763.1	5-nitroimidazole reductase NimI	NF000262.1	NimIJ family 5-nitroimidazole reductase	AWEY01000007.1	190962	191447
GCA_001220605.1	GCA_001220605.1_00925	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CTEL01000007.1	30510	30911
GCA_001220605.1	GCA_001220605.1_00926	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.94	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CTEL01000007.1	30929	32218
GCA_001220605.1	GCA_001220605.1_01502	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CTEL01000017.1	11006	11386
GCA_001220605.1	GCA_001220605.1_01503	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CTEL01000017.1	11376	13133
GCA_001220605.1	GCA_001220605.1_01504	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CTEL01000017.1	13240	14085
GCA_001220605.1	GCA_001220605.1_01513	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CTEL01000018.1	6583	8589
GCA_001220605.1	GCA_001220605.1_01704	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CTEL01000025.1	80	1519
GCA_001220605.1	GCA_001220605.1_02054	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CTEL01000031.1	19698	20771
GCA_001220605.1	GCA_001220605.1_02205	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CTEL01000032.1	60338	61627
GCA_937930665.1	GCA_937930665.1_01378	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	BLASTP	405	405	100.00	98.52	405	WP_058621816.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CALHBY010000141.1	1628	2845
GCA_937930665.1	GCA_937930665.1_01562	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CALHBY010000169.1	3768	5231
GCA_937930665.1	GCA_937930665.1_01563	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CALHBY010000169.1	5351	6568
GCA_028326605.1	GCA_028326605.1_01761	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JAQMNE010000007.1	70517	71248
GCA_028326605.1	GCA_028326605.1_01878	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_043029018.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JAQMNE010000009.1	49644	51563
GCA_030176195.1	GCA_030176195.1_00880	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASNVG010000023.1	787	1638
GCA_030176195.1	GCA_030176195.1_00889	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASNVG010000023.1	9519	10373
GCA_030176195.1	GCA_030176195.1_00902	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASNVG010000026.1	1844	3019
GCA_003943355.1	GCA_003943355.1_00492	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	61.24	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RJPG01000001.1	491639	492067
GCA_026430575.1	GCA_026430575.1_00100	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP110784.1	108270	108692
GCA_026430575.1	GCA_026430575.1_00150	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP110784.1	167892	168965
GCA_026430575.1	GCA_026430575.1_00918	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP110784.1	904315	905160
GCA_026430575.1	GCA_026430575.1_00919	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.32	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP110784.1	905267	907024
GCA_026430575.1	GCA_026430575.1_00920	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	98.41	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP110784.1	907014	907394
GCA_026430575.1	GCA_026430575.1_00922	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP110784.1	907701	908990
GCA_026430575.1	GCA_026430575.1_02147	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	95.42	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP110784.1	2118860	2119255
GCA_026430575.1	GCA_026430575.1_02148	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP110784.1	2119272	2120564
GCA_026430575.1	GCA_026430575.1_02152	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP110784.1	2124247	2124594
GCA_001810105.1	GCA_001810105.1_01856	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_000691729.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	KV799988.1	38208	40127
GCA_002902685.1	GCA_002902685.1_01444	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	99.43	52.01	348	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	PPRN01000038.1	26472	27524
GCA_002902685.1	GCA_002902685.1_02252	vga(A)	ABC-F type ribosomal protection protein Vga(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	520	522	100.00	97.51	522	WP_032489639.1	ABC-F type ribosomal protection protein Vga(A)	NF000170.2	Vga family ABC-F type ribosomal protection protein	PPRN01000071.1	2035	3597
GCA_002902685.1	GCA_002902685.1_02295	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	PPRN01000008.1	4340	4687
GCA_002902685.1	GCA_002902685.1_02299	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	95.10	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	PPRN01000008.1	8373	9662
GCA_002902685.1	GCA_002902685.1_02404	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	75.36	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	PPRN01000091.1	11032	11451
GCA_008831525.1	GCA_008831525.1_01645	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	96.77	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP044497.1	1615118	1616512
GCA_021378605.1	GCA_021378605.1_02791	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_009305318.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP089331.1	3196383	3198302
GCA_025145915.1	GCA_025145915.1_02038	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	464	631	73.69	41.19	471	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXMA010000041.1	26445	27839
GCA_017315645.1	GCA_017315645.1_00444	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAFFRS010000019.1	92402	93946
GCA_017315645.1	GCA_017315645.1_00445	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAFFRS010000019.1	94130	94690
GCA_017315645.1	GCA_017315645.1_00538	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAFFRS010000019.1	190669	191016
GCA_017315645.1	GCA_017315645.1_00542	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAFFRS010000019.1	194699	195991
GCA_017315645.1	GCA_017315645.1_00719	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAFFRS010000023.1	40598	40978
GCA_017315645.1	GCA_017315645.1_00720	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.38	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAFFRS010000023.1	40968	42725
GCA_017315645.1	GCA_017315645.1_00721	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAFFRS010000023.1	42832	43677
GCA_001683095.1	GCA_001683095.1_00748	inhA2	M6 family metalloprotease immune inhibitor InhA2	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	799	799	100.00	100.00	799	AAP24685.1	M6 family metalloprotease immune inhibitor InhA2	NA	NA	CP012730.1	688774	691173
GCA_001683095.1	GCA_001683095.1_00753	cerA	phospholipase CerA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	283	283	100.00	98.59	283	AAS39677.1	phospholipase CerA	NA	NA	CP012730.1	695038	695889
GCA_001683095.1	GCA_001683095.1_00754	sph	sphingomyelinase C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	333	338	98.52	99.70	333	AAP24691.1	sphingomyelinase C	NA	NA	CP012730.1	695963	696964
GCA_001683095.1	GCA_001683095.1_01345	inhA1	M6 family metalloprotease immune inhibitor InhA1	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	795	796	100.00	96.61	796	ADH05944.1	M6 family metalloprotease immune inhibitor InhA1	NA	NA	CP012730.1	1240385	1242772
GCA_001683095.1	GCA_001683095.1_01644	mphL	macrolide 2-phosphotransferase MphL	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	298	303	98.02	87.21	297	WP_002047670.1	macrolide 2-phosphotransferase MphL	NF038057.1	macrolide 2-phosphotransferase MphL	CP012730.1	1495351	1496247
GCA_001683095.1	GCA_001683095.1_01943	nheA	non-hemolytic enterotoxin NHE subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	386	386	100.00	97.93	386	AAS40892.1	non-hemolytic enterotoxin NHE subunit A	NA	NA	CP012730.1	1770878	1772038
GCA_001683095.1	GCA_001683095.1_01944	nheB	non-hemolytic enterotoxin NHE subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	402	402	100.00	98.51	402	AAS40893.1	non-hemolytic enterotoxin NHE subunit B	NA	NA	CP012730.1	1772070	1773278
GCA_001683095.1	GCA_001683095.1_02006	entFM	enterotoxin EntFM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	420	421	100.00	98.81	421	AFH83235.1	enterotoxin EntFM	NF040678.1	enterotoxin EntFM	CP012730.1	1838277	1839539
GCA_001683095.1	GCA_001683095.1_02093	fosB	FosBx1 family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	138	138	100.00	89.13	138	WP_000943772.1	FosBx1 family fosfomycin resistance bacillithiol transferase	NF041541.1	FosBx1 family fosfomycin resistance bacillithiol transferase	CP012730.1	1916611	1917027
GCA_001683095.1	GCA_001683095.1_02450	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	219	98.63	57.87	216	WP_087344902.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	CP012730.1	2247046	2247696
GCA_001683095.1	GCA_001683095.1_02539	bla	class A beta-lactamase Bla1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	306	309	99.03	99.67	306	WP_011053164.1	class A beta-lactamase Bla1	NF033096.1	class A beta-lactamase Bla1	CP012730.1	2328533	2329453
GCA_001683095.1	GCA_001683095.1_02566	hlyII	hemolysin II HlyII	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	240	412	58.25	96.25	240	AAP10457.1	hemolysin II HlyII	NA	NA	CP012730.1	2353036	2353758
GCA_001683095.1	GCA_001683095.1_02567	hlyIIR	hemolysin II regulator HlyIIR	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	201	201	100.00	99.50	201	AAO74585.1	hemolysin II regulator HlyIIR	NA	NA	CP012730.1	2354289	2354894
GCA_001683095.1	GCA_001683095.1_02568	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	82.52	492	WP_011133547.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP012730.1	2355036	2356514
GCA_001683095.1	GCA_001683095.1_02671	vat	Vat family streptogramin A O-acetyltransferase	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	HMM	210	210	98.10	66.67	207	WP_071218948.1	Vat family streptogramin A O-acetyltransferase	NF000311.1	Vat family streptogramin A O-acetyltransferase	CP012730.1	2447867	2448499
GCA_001683095.1	GCA_001683095.1_03208	satA	streptothricin N-acetyltransferase SatA	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	184	184	100.00	100.00	184	WP_000054744.1	streptothricin N-acetyltransferase SatA	NA	NA	CP012730.1	2934026	2934580
GCA_001683095.1	GCA_001683095.1_03361	alo	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	512	512	100.00	100.00	512	AAP27127.1	anthrolysin O/cereolysin O family cholesterol-dependent cytolysin Alo	NA	NA	CP012730.1	3086993	3088531
GCA_001683095.1	GCA_001683095.1_03504	bla2	BcII family subclass B1 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	EXACTP	256	256	100.00	100.00	256	WP_000799223.1	BcII family subclass B1 metallo-beta-lactamase	NF033095.1	BcII family subclass B1 metallo-beta-lactamase	CP012730.1	3217527	3218297
GCA_001683095.1	GCA_001683095.1_03872	plcA	phosphatidylinositol diacylglycerol-lyase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	329	329	100.00	100.00	329	AAP27624.1	phosphatidylinositol diacylglycerol-lyase	NA	NA	CP012730.1	3558351	3559340
GCA_001683095.1	GCA_001683095.1_04091	fosB2	fosfomycin resistance bacillithiol transferase FosB2	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	ALLELEP	139	139	100.00	100.00	139	WP_000938987.1	fosfomycin resistance bacillithiol transferase FosB2	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP012730.1	3778902	3779321
GCA_001683095.1	GCA_001683095.1_05565	plcR	transcriptional regulator PlcR	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	213	285	74.74	98.12	213	AAT61178.1	transcriptional regulator PlcR	NA	NA	CP012730.1	5082633	5083274
GCA_963394905.1	GCA_963394905.1_00028	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	507	508	99.61	97.83	506	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJPI010000001.1	23373	24896
GCA_963394905.1	GCA_963394905.1_00292	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.21	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJPI010000002.1	60949	62328
GCA_963394905.1	GCA_963394905.1_00984	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.63	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJPI010000007.1	65965	67203
GCA_963394905.1	GCA_963394905.1_00985	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJPI010000007.1	67220	68083
GCA_016785885.1	GCA_016785885.1_00237	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	97.86	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JAADJX010000001.1	272611	274152
GCA_016785885.1	GCA_016785885.1_00750	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3)-Ib	JAADJX010000001.1	821170	821973
GCA_016785885.1	GCA_016785885.1_00751	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JAADJX010000001.1	821973	822809
GCA_016785885.1	GCA_016785885.1_00752	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAADJX010000001.1	823013	824188
GCA_016785885.1	GCA_016785885.1_00978	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAADJX010000001.1	1058992	1059846
GCA_015135575.1	GCA_015135575.1_00821	silE	silver-binding protein SilE	plus	STRESS	METAL	SILVER	SILVER	BLASTP	143	143	100.00	92.31	143	AAD11743.1	silver-binding protein SilE	NA	NA	AP022419.1	833089	833520
GCA_015135575.1	GCA_015135575.1_00822	silS	copper/silver sensor histidine kinase SilS	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	491	491	100.00	98.37	491	SPD96882.1	copper/silver sensor histidine kinase SilS	NA	NA	AP022419.1	833771	835246
GCA_015135575.1	GCA_015135575.1_00823	silR	copper/silver response regulator transcription factor SilR	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	226	226	100.00	97.35	226	SPD96883.1	copper/silver response regulator transcription factor SilR	NA	NA	AP022419.1	835239	835919
GCA_015135575.1	GCA_015135575.1_00824	silC	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	461	461	100.00	97.61	461	SPD96884.1	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	AP022419.1	836109	837494
GCA_015135575.1	GCA_015135575.1_00825	silF	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	117	117	100.00	97.44	117	KGL71342.1	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF	NA	NA	AP022419.1	837523	837876
GCA_015135575.1	GCA_015135575.1_00826	silB	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	430	430	100.00	96.28	430	AAD11748.1	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	AP022419.1	837990	839282
GCA_015135575.1	GCA_015135575.1_00827	silA	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	plus	STRESS	METAL	COPPER/SILVER	COPPER/SILVER	BLASTP	1048	1048	100.00	98.66	1048	AAD11749.1	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	AP022419.1	839293	842439
GCA_015135575.1	GCA_015135575.1_00829	silP	Ag(+)-translocating P-type ATPase SilP	plus	STRESS	METAL	SILVER	SILVER	BLASTP	817	824	98.79	94.99	818	AAD11750.1	Ag(+)-translocating P-type ATPase SilP	NA	NA	AP022419.1	843093	845546
GCA_015135575.1	GCA_015135575.1_00833	pcoA	multicopper oxidase PcoA	plus	STRESS	METAL	COPPER	COPPER	BLASTP	605	605	100.00	99.83	605	CAA58525.1	multicopper oxidase PcoA	NA	NA	AP022419.1	847528	849345
GCA_015135575.1	GCA_015135575.1_00834	pcoB	copper-binding protein PcoB	plus	STRESS	METAL	COPPER	COPPER	BLASTP	298	296	100.00	99.66	296	CAA58526.1	copper-binding protein PcoB	NA	NA	AP022419.1	849345	850241
GCA_015135575.1	GCA_015135575.1_00835	pcoC	copper resistance system metallochaperone PcoC	plus	STRESS	METAL	COPPER	COPPER	BLASTP	126	126	100.00	99.21	126	CAA58527.1	copper resistance system metallochaperone PcoC	NA	NA	AP022419.1	850281	850661
GCA_015135575.1	GCA_015135575.1_00836	pcoD	copper resistance inner membrane protein PcoD	plus	STRESS	METAL	COPPER	COPPER	EXACTP	309	309	100.00	100.00	309	CAA58528.1	copper resistance inner membrane protein PcoD	NA	NA	AP022419.1	850666	851595
GCA_015135575.1	GCA_015135575.1_00837	pcoR	copper response regulator transcription factor PcoR	plus	STRESS	METAL	COPPER	COPPER	EXACTP	226	226	100.00	100.00	226	CAA58529.1	copper response regulator transcription factor PcoR	NA	NA	AP022419.1	851650	852330
GCA_015135575.1	GCA_015135575.1_00838	pcoS	copper resistance membrane spanning protein PcoS	plus	STRESS	METAL	COPPER	COPPER	BLASTP	466	466	100.00	99.14	466	CAA58530.1	copper resistance membrane spanning protein PcoS	NA	NA	AP022419.1	852327	853727
GCA_015135575.1	GCA_015135575.1_00839	pcoE	copper resistance system metallochaperone PcoE	plus	STRESS	METAL	COPPER	COPPER	BLASTP	144	144	100.00	93.75	144	CAA58532.1	copper resistance system metallochaperone PcoE	NA	NA	AP022419.1	853943	854377
GCA_015135575.1	GCA_015135575.1_00842	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	116	116	100.00	93.10	116	AET17094.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	AP022419.1	855921	856271
GCA_015135575.1	GCA_015135575.1_00843	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	120	120	100.00	89.17	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP022419.1	856319	856681
GCA_015135575.1	GCA_015135575.1_00844	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	94.85	583	BAA24822.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	AP022419.1	856698	858449
GCA_015135575.1	GCA_015135575.1_00845	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.14	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	AP022419.1	858497	859786
GCA_015135575.1	GCA_015135575.1_00846	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	90.78	141	AAA21096.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	AP022419.1	859799	860224
GCA_015135575.1	GCA_015135575.1_01456	blaCTX-M-5	extended-spectrum class A beta-lactamase CTX-M-5	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_032072602.1	extended-spectrum class A beta-lactamase CTX-M-5	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase	AP022419.1	1460725	1461600
GCA_015135575.1	GCA_015135575.1_03131	fosA	FosA family fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	142	139	100.00	82.73	139	WP_004857515.1	FosA family fosfomycin resistance glutathione transferase	NF000221.4	FosA family fosfomycin resistance glutathione transferase	AP022419.1	3181271	3181699
GCA_015135575.1	GCA_015135575.1_03892	iutA	ferric aerobactin receptor IutA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	732	731	100.00	82.22	731	AAN45165.2	ferric aerobactin receptor IutA	NA	NA	AP022419.1	3952571	3954769
GCA_015135575.1	GCA_015135575.1_03938	hsp20	small heat shock protein sHSP20	plus	STRESS	HEAT	NA	NA	BLASTP	189	189	100.00	98.94	189	CDY80020.1	small heat shock protein sHSP20	NA	NA	AP022419.1	4010348	4010917
GCA_015135575.1	GCA_015135575.1_03939	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	99.37	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	AP022419.1	4011023	4013872
GCA_015135575.1	GCA_015135575.1_03942	shsP	small heat shock protein sHSP20-GI	plus	STRESS	HEAT	NA	NA	EXACTP	152	152	100.00	100.00	152	ASF80771.1	small heat shock protein sHSP20-GI	NA	NA	AP022419.1	4016017	4016475
GCA_015135575.1	GCA_015135575.1_03943	yfdX1	heat resistance protein YfdX1	plus	STRESS	HEAT	NA	NA	BLASTP	304	304	100.00	99.67	304	APX31172.1	heat resistance protein YfdX1	NA	NA	AP022419.1	4016498	4017412
GCA_015135575.1	GCA_015135575.1_03944	yfdX2	heat resistance protein YfdX2	plus	STRESS	HEAT	NA	NA	BLASTP	295	295	100.00	97.97	295	ASF80766.1	heat resistance protein YfdX2	NA	NA	AP022419.1	4017515	4018402
GCA_015135575.1	GCA_015135575.1_03945	hdeD-GI	heat resistance membrane protein HdeD-GI	plus	STRESS	HEAT	NA	NA	BLASTP	203	203	100.00	97.54	203	APX31174.1	heat resistance membrane protein HdeD-GI	NA	NA	AP022419.1	4018492	4019103
GCA_015135575.1	GCA_015135575.1_03947	trxLHR	heat resistance system thioredoxin Trx-GI	plus	STRESS	HEAT	NA	NA	BLASTP	146	146	100.00	98.63	146	APX31176.1	heat resistance system thioredoxin Trx-GI	NA	NA	AP022419.1	4020318	4020758
GCA_015135575.1	GCA_015135575.1_03948	kefB-GI	heat resistance system K+/H+ antiporter KefB-GI	plus	STRESS	HEAT	NA	NA	BLASTP	571	571	100.00	97.90	571	APX31177.1	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	AP022419.1	4020762	4022477
GCA_015135575.1	GCA_015135575.1_03949	psi-GI	heat resistance protein PsiE-GI	plus	STRESS	HEAT	NA	NA	BLASTP	165	165	100.00	98.18	165	APX31178.1	heat resistance protein PsiE-GI	NA	NA	AP022419.1	4022474	4022971
GCA_015135575.1	GCA_015135575.1_04952	fieF	CDF family cation-efflux transporter FieF	plus	STRESS	METAL	NA	NA	BLASTP	297	300	98.33	90.17	295	BAB89353.1	CDF family cation-efflux transporter FieF	NA	NA	AP022419.1	5042214	5043107
GCA_015135575.1	GCA_015135575.1_05220	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	78	78	100.00	96.15	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	AP022420.1	84514	84750
GCA_015135575.1	GCA_015135575.1_05221	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	90.08	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	AP022420.1	84747	85112
GCA_015135575.1	GCA_015135575.1_05222	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	93.23	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	AP022420.1	85130	86815
GCA_015135575.1	GCA_015135575.1_05223	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	141	141	100.00	80.14	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	AP022420.1	86854	87279
GCA_015135575.1	GCA_015135575.1_05224	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	91	91	100.00	85.71	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	AP022420.1	87307	87582
GCA_015135575.1	GCA_015135575.1_05225	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	99.14	116	CAA70196.1	mercuric transport protein MerT	NA	NA	AP022420.1	87598	87948
GCA_015135575.1	GCA_015135575.1_05226	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	151	144	98.61	92.96	142	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	AP022420.1	88020	88475
GCA_015135575.1	GCA_015135575.1_05406	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	PARTIALP	126	141	85.82	99.17	121	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	AP022421.1	43856	44236
GCA_015135575.1	GCA_015135575.1_05407	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.37	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	AP022421.1	44249	45538
GCA_015135575.1	GCA_015135575.1_05408	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	99.14	583	AAB09626.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	AP022421.1	45587	47338
GCA_015135575.1	GCA_015135575.1_05409	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	98.33	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP022421.1	47356	47718
GCA_015135575.1	GCA_015135575.1_05410	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	AAB09624.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	AP022421.1	47766	48119
GCA_015135575.1	GCA_015135575.1_05527	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	AP022422.1	11550	12389
GCA_015135575.1	GCA_015135575.1_05528	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE	AP022422.1	12383	12730
GCA_015135575.1	GCA_015135575.1_05533	blaGES-24	carbapenem-hydrolyzing class A beta-lactamase GES-24	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	287	287	100.00	100.00	287	WP_059385191.1	carbapenem-hydrolyzing class A beta-lactamase GES-24	NF012103.0	GES family class A beta-lactamase	AP022422.1	14866	15729
GCA_015135575.1	GCA_015135575.1_05547	arsC	glutaredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	141	141	100.00	99.29	141	AAB09628.1	glutaredoxin-dependent arsenate reductase	NF007456.1	glutaredoxin-dependent arsenate reductase	AP022422.1	24205	24630
GCA_015135575.1	GCA_015135575.1_05548	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	98.37	429	BAA24823.1	arsenite efflux transporter membrane subunit ArsB	NA	NA	AP022422.1	24643	25932
GCA_015135575.1	GCA_015135575.1_05549	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	583	583	100.00	99.14	583	AAB09626.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA	AP022422.1	25981	27732
GCA_015135575.1	GCA_015135575.1_05550	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	120	120	100.00	98.33	120	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	AP022422.1	27750	28112
GCA_015135575.1	GCA_015135575.1_05551	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	117	117	100.00	100.00	117	AAB09624.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	AP022422.1	28160	28513
GCA_001061305.1	GCA_001061305.1_01418	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	470	631	73.38	80.78	463	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JVXR01000089.1	144	1556
GCA_030515855.1	GCA_030515855.1_01959	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	93.31	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100372.1	2134919	2135773
GCA_001809455.1	GCA_001809455.1_00601	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	547	84.28	44.61	473	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV797727.1	18377	19801
GCA_001809455.1	GCA_001809455.1_00605	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.94	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV797727.1	21523	22377
GCA_006439235.1	GCA_006439235.1_01762	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	SDPC01000011.1	52244	53638
GCA_001336595.1	GCA_001336595.1_01967	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	377	399	94.49	98.67	377	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CGVP01000038.1	13211	14344
GCA_022690265.1	GCA_022690265.1_00121	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.61	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCVT010000013.1	3287	4831
GCA_022690265.1	GCA_022690265.1_00122	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCVT010000013.1	5015	5575
GCA_022690265.1	GCA_022690265.1_00124	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	JALCVT010000013.1	6879	7778
GCA_022690265.1	GCA_022690265.1_00125	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	JALCVT010000013.1	7877	9343
GCA_022690265.1	GCA_022690265.1_01104	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVT010000002.1	133858	135150
GCA_022690265.1	GCA_022690265.1_01108	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JALCVT010000002.1	138833	139180
GCA_022690265.1	GCA_022690265.1_01195	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	547	631	87.64	74.14	553	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALCVT010000002.1	226430	228073
GCA_022690265.1	GCA_022690265.1_01316	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCVT010000003.1	37376	38221
GCA_022690265.1	GCA_022690265.1_01317	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCVT010000003.1	38328	40085
GCA_022690265.1	GCA_022690265.1_01318	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCVT010000003.1	40075	40455
GCA_003193745.1	GCA_003193745.1_00045	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP029653.1	46912	48918
GCA_003193745.1	GCA_003193745.1_00085	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA	CP029653.1	87743	88081
GCA_003193745.1	GCA_003193745.1_00086	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP029653.1	88139	89782
GCA_003193745.1	GCA_003193745.1_00087	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP029653.1	89864	90514
GCA_003193745.1	GCA_003193745.1_00154	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP029653.1	164944	166302
GCA_003193745.1	GCA_003193745.1_00357	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP029653.1	396629	397984
GCA_003193745.1	GCA_003193745.1_00858	sec3	staphylococcal enterotoxin type C3	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	BAB43097.1	staphylococcal enterotoxin type C3	NA	NA	CP029653.1	896656	897456
GCA_003193745.1	GCA_003193745.1_00859	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.17	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA	CP029653.1	897623	898345
GCA_003193745.1	GCA_003193745.1_01601	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP029653.1	1650449	1651825
GCA_003193745.1	GCA_003193745.1_01602	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_001574275.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP029653.1	1652019	1653938
GCA_003193745.1	GCA_003193745.1_01817	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP029653.1	1852302	1853033
GCA_003193745.1	GCA_003193745.1_01818	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP029653.1	1853159	1853941
GCA_003193745.1	GCA_003193745.1_01937	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP029653.1	1995738	1997030
GCA_003193745.1	GCA_003193745.1_01983	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.06	238	ABD30999.1	serine protease SplE	NA	NA	CP029653.1	2035916	2036632
GCA_003193745.1	GCA_003193745.1_01994	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP029653.1	2045617	2046372
GCA_003193745.1	GCA_003193745.1_01995	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP029653.1	2046411	2047196
GCA_003193745.1	GCA_003193745.1_01996	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP029653.1	2047350	2048078
GCA_003193745.1	GCA_003193745.1_01997	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.65	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP029653.1	2048113	2048832
GCA_003193745.1	GCA_003193745.1_02137	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP029653.1	2158563	2158943
GCA_003193745.1	GCA_003193745.1_02138	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP029653.1	2158933	2160690
GCA_003193745.1	GCA_003193745.1_02139	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP029653.1	2160797	2161642
GCA_003193745.1	GCA_003193745.1_02161	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP029653.1	2182442	2182792
GCA_003193745.1	GCA_003193745.1_02166	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA	CP029653.1	2185004	2185495
GCA_003193745.1	GCA_003193745.1_02170	sep	staphylococcal enterotoxin type P	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	260	260	100.00	100.00	260	ADC38120.1	staphylococcal enterotoxin type P	NA	NA	CP029653.1	2187298	2188080
GCA_003193745.1	GCA_003193745.1_02244	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP029653.1	2240674	2240808
GCA_003193745.1	GCA_003193745.1_02396	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	96.67	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP029653.1	2392097	2393539
GCA_003193745.1	GCA_003193745.1_02567	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP029653.1	2542724	2543143
GCA_003193745.1	GCA_003193745.1_02661	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP029653.1	2635471	2636436
GCA_003193745.1	GCA_003193745.1_02662	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP029653.1	2636986	2637933
GCA_003193745.1	GCA_003193745.1_02663	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP029653.1	2637935	2638912
GCA_003193745.1	GCA_003193745.1_02878	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP029653.1	2869426	2870955
GCA_003193745.1	GCA_003193745.1_02912	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP029653.1	2914866	2915918
GCA_003193745.1	GCA_003193745.1_02935	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.89	1183	BAB96477.1	collagen adhesin Cna	NA	NA	CP029653.1	2937257	2940808
GCA_015070775.1	GCA_015070775.1_00393	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JADCSB010000010.1	913	1332
GCA_015070775.1	GCA_015070775.1_00394	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JADCSB010000010.1	1332	2168
GCA_015070775.1	GCA_015070775.1_00395	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JADCSB010000010.1	2372	3547
GCA_015070775.1	GCA_015070775.1_01602	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JADCSB010000004.1	189884	191326
GCA_003943625.1	GCA_003943625.1_01644	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	92.96	60.61	132	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	RQOY01000010.1	16603	17031
GCA_018128345.1	GCA_018128345.1_02331	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	271	284	100.00	55.63	284	WP_011152925.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP072386.1	2565127	2565942
GCA_030272855.1	GCA_030272855.1_00673	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQCMU010000002.1	104237	105454
GCA_030272855.1	GCA_030272855.1_00674	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQCMU010000002.1	105574	107037
GCA_022870085.1	GCA_022870085.1_01396	blaOXA-114f	class D beta-lactamase OXA-114f	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	275	275	100.00	100.00	275	WP_024069684.1	class D beta-lactamase OXA-114f	NF033818.0	OXA-114 family class D beta-lactamase	CP064377.1	1505279	1506106
GCA_022870085.1	GCA_022870085.1_01498	blaELC	ELC family class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	HMM	430	450	100.00	87.78	450	WP_232734851.1	ELC family class C beta-lactamase	NF050047.1	ELC family class C beta-lactamase	CP064377.1	1636359	1637651
GCA_022870085.1	GCA_022870085.1_01978	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	261	266	97.74	42.15	261	WP_004861468.1	APH(3) family aminoglycoside O-phosphotransferase	NF033068.1	APH(3) family aminoglycoside O-phosphotransferase	CP064377.1	2151639	2152424
GCA_022870085.1	GCA_022870085.1_02126	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043260.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2	CP064377.1	2294737	2295552
GCA_022870085.1	GCA_022870085.1_02989	catB	type B chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	216	210	98.10	81.55	206	WP_063843223.1	type B chloramphenicol O-acetyltransferase	NF000490.1	type B chloramphenicol O-acetyltransferase	CP064377.1	3267616	3268266
GCA_022870085.1	GCA_022870085.1_03280	tet	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	398	399	96.49	61.04	385	WP_000804064.1	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	NF012174.0	Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter	CP064377.1	3580401	3581597
GCA_022870085.1	GCA_022870085.1_04489	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	562	100.00	81.85	562	CAC69251.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP064377.1	4928647	4930335
GCA_022870085.1	GCA_022870085.1_04490	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	95	91	100.00	69.47	95	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP064377.1	4930346	4930633
GCA_022870085.1	GCA_022870085.1_06014	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP064377.1	6564490	6564726
GCA_022870085.1	GCA_022870085.1_06015	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP064377.1	6564723	6565088
GCA_022870085.1	GCA_022870085.1_06016	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.75	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP064377.1	6565106	6566791
GCA_022870085.1	GCA_022870085.1_06017	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP064377.1	6566863	6567138
GCA_022870085.1	GCA_022870085.1_06018	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.10	116	CAA70196.1	mercuric transport protein MerT	NA	NA	CP064377.1	6567151	6567501
GCA_022870085.1	GCA_022870085.1_06019	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP064377.1	6567573	6568007
GCA_022870085.1	GCA_022870085.1_06041	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	119	120	99.17	59.66	119	AAA93060.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP064377.1	6590999	6591358
GCA_030229925.1	GCA_030229925.1_00350	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPGF010000016.1	787	1638
GCA_030229925.1	GCA_030229925.1_00359	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPGF010000016.1	9520	10374
GCA_030229925.1	GCA_030229925.1_00363	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPGF010000018.1	269	1444
GCA_019703615.1	GCA_019703615.1_01536	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	97.20	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	AP018774.1	1563660	1565054
GCA_001836905.1	GCA_001836905.1_00379	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	639	100.00	98.12	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV830861.1	440302	442224
GCA_001836905.1	GCA_001836905.1_00382	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.24	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV830861.1	444240	445094
GCA_900187995.1	GCA_900187995.1_01267	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	FZNZ01000002.1	95117	96307
GCA_003253775.1	GCA_003253775.1_03698	aac(2)-Ie	aminoglycoside N-acetyltransferase AAC(2)-Ie	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	182	182	100.00	100.00	182	WP_010908954.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	NF000054.1	aminoglycoside N-acetyltransferase AAC(2)-Ie	CP029543.1	2963278	2963826
GCA_021366815.1	GCA_021366815.1_01440	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAHCPQ010000002.1	287658	288950
GCA_021366815.1	GCA_021366815.1_02066	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JAHCPQ010000005.1	48584	49225
GCA_021366815.1	GCA_021366815.1_02510	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAHCPQ010000010.1	17079	17924
GCA_021366815.1	GCA_021366815.1_02511	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAHCPQ010000010.1	18031	19788
GCA_021366815.1	GCA_021366815.1_02512	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAHCPQ010000010.1	19778	20158
GCA_021366815.1	GCA_021366815.1_02570	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	JAHCPQ010000015.1	1567	2946
GCA_021366815.1	GCA_021366815.1_02585	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	JAHCPQ010000020.1	1312	2046
GCA_003992135.1	GCA_003992135.1_00208	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	PARTIALP	185	245	75.51	99.46	185	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF000499.2	23S ribosomal RNA methyltransferase Erm	RQVN01000002.1	36500	37057
GCA_003992135.1	GCA_003992135.1_00209	aph(3)-IIIa	aminoglycoside O-phosphotransferase APH(3)-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3)-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3)-IIIa	RQVN01000002.1	37329	38123
GCA_003992135.1	GCA_003992135.1_00212	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	245	245	100.00	99.59	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	RQVN01000002.1	39799	40536
GCA_003992135.1	GCA_003992135.1_00222	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	98.59	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	RQVN01000002.1	50457	52376
GCA_008801915.1	GCA_008801915.1_00219	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	400	390	96.15	47.34	376	WP_063857697.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	VZOV01000001.1	262955	264157
GCA_008801915.1	GCA_008801915.1_00543	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	HMM	141	144	93.75	87.41	135	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	VZOV01000001.1	613509	613934
GCA_008801915.1	GCA_008801915.1_00545	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	93	91	100.00	80.65	93	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	VZOV01000001.1	614370	614651
GCA_008801915.1	GCA_008801915.1_00547	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	562	561	100.00	83.63	562	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VZOV01000001.1	615137	616825
GCA_008801915.1	GCA_008801915.1_00785	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	BLASTP	949	949	100.00	95.47	949	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	VZOV01000002.1	229564	232413
GCA_008801915.1	GCA_008801915.1_03650	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	561	561	100.00	82.17	561	ACU65296.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VZOV01000016.1	78499	80184
GCA_008801915.1	GCA_008801915.1_03651	merC	organomercurial transporter MerC	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	HMM	139	141	100.00	70.92	141	AAC38233.1	organomercurial transporter MerC	NF033784.1	organomercurial transporter MerC	VZOV01000016.1	80225	80644
GCA_008801915.1	GCA_008801915.1_03652	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	HMM	90	91	100.00	82.42	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	VZOV01000016.1	80673	80945
GCA_008801915.1	GCA_008801915.1_03657	mcr-5.1	phosphoethanolamine--lipid A transferase MCR-5.1	core	AMR	AMR	COLISTIN	COLISTIN	ALLELEP	547	547	100.00	100.00	547	WP_053821788.1	phosphoethanolamine--lipid A transferase MCR-5.1	NF033463.1	MCR-5 family phosphoethanolamine--lipid A transferase	VZOV01000016.1	85122	86765
GCA_008801915.1	GCA_008801915.1_03855	aac(3)-IV	AAC(3)-IV family aminoglycoside N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	262	265	96.98	82.10	257	WP_149317372.1	AAC(3)-IV family aminoglycoside N-acetyltransferase	NF033081.0	AAC(3)-IV family aminoglycoside N-acetyltransferase	VZOV01000018.1	50082	50870
GCA_008801915.1	GCA_008801915.1_03977	blaOXA	OXA-837 family class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	305	301	100.00	82.62	305	WP_148281568.1	OXA-837 family class D beta-lactamase	NF042983.1	OXA-837 family class D beta-lactamase	VZOV01000019.1	61078	61995
GCA_000741965.1	GCA_000741965.1_00941	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	KN046803.1	1005809	1006714
GCA_000741965.1	GCA_000741965.1_01070	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	418	412	100.00	94.50	418	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	KN046803.1	1165180	1166436
GCA_000741965.1	GCA_000741965.1_01071	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	97.14	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	KN046803.1	1166453	1167316
GCA_000741965.1	GCA_000741965.1_01259	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.85	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	KN046803.1	1363290	1364816
GCA_001456385.1	GCA_001456385.1_00306	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	131	121	100.00	50.37	135	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LKLC01000008.1	23761	24156
GCA_020735825.1	GCA_020735825.1_00444	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	464	464	100.00	100.00	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	CP085949.1	461959	463353
GCA_020735825.1	GCA_020735825.1_01821	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase	CP085950.1	329	1189
GCA_024579795.1	GCA_024579795.1_02244	lsa(A)	ABC-F type ribosomal protection protein Lsa(A)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	498	498	100.00	99.60	498	WP_002398829.1	ABC-F type ribosomal protection protein Lsa(A)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP102070.1	2267118	2268614
GCA_024579795.1	GCA_024579795.1_02454	lnu(G)	lincosamide nucleotidyltransferase Lnu(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	267	267	100.00	97.75	267	WP_002333496.1	lincosamide nucleotidyltransferase Lnu(G)	NF033182.0	lincosamide nucleotidyltransferase Lnu(G)	CP102070.1	2441977	2442780
GCA_024579795.1	GCA_024579795.1_02918	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	218	287	75.96	100.00	218	WP_002294505.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	NA	CP102071.1	19122	19778
GCA_024579795.1	GCA_024579795.1_02920	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP102071.1	20044	21483
GCA_024579795.1	GCA_024579795.1_02968	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	HMM	243	243	99.59	85.54	242	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP102072.1	1938	2669
GCA_024579795.1	GCA_024579795.1_02969	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP102072.1	2794	3576
GCA_024579795.1	GCA_024579795.1_02974	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	PARTIALP	162	245	60.41	98.65	148	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	NA	CP102072.1	7786	8274
GCA_024579795.1	GCA_024579795.1_03023	optrA	ABC-F type ribosomal protection protein OptrA	core	AMR	AMR	OXAZOLIDINONE/PHENICOL	FLORFENICOL/OXAZOLIDINONE	BLASTP	637	655	97.25	99.69	637	WP_063854496.1	ABC-F type ribosomal protection protein OptrA	NF000514.1	ABC-F type ribosomal protection protein OptrA	CP102072.1	51070	52983
GCA_024579795.1	GCA_024579795.1_03038	cfr(D)	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(D)	core	AMR	AMR	LINCOSAMIDE/OXAZOLIDINONE/PHENICOL/PLEUROMUTILIN/STREPTOGRAMIN	CHLORAMPHENICOL/CLINDAMYCIN/LINEZOLID/STREPTOGRAMIN B/TEDIZOLID/TIAMULIN	BLASTP	357	357	100.00	99.72	357	WP_105459893.1	23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr(D)	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	CP102073.1	13207	14280
GCA_024579795.1	GCA_024579795.1_03039	poxtA2	ABC-F type ribosomal protection protein PoxtA2	core	AMR	AMR	OXAZOLIDINONE/PHENICOL	CHLORAMPHENICOL/FLORFENICOL/LINEZOLID	ALLELEP	544	544	100.00	100.00	544	WP_209691075.1	ABC-F type ribosomal protection protein PoxtA2	NA	NA	CP102073.1	14407	16041
GCA_024579795.1	GCA_024579795.1_03041	fexA	chloramphenicol/florfenicol efflux MFS transporter FexA	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL/FLORFENICOL	BLASTP	475	475	100.00	98.95	475	WP_015585966.1	chloramphenicol/florfenicol efflux MFS transporter FexA	NF000218.1	chloramphenicol/florfenicol efflux MFS transporter FexA	CP102073.1	16979	18406
GCA_013276535.1	GCA_013276535.1_00630	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	VMLF01000020.1	101796	103013
GCA_013276535.1	GCA_013276535.1_00631	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	VMLF01000020.1	103034	104497
GCA_013276535.1	GCA_013276535.1_00668	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.69	639	WP_063856391.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	VMLF01000020.1	135294	137213
GCA_013276535.1	GCA_013276535.1_01812	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	473	399	98.75	99.75	394	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	VMLF01000067.1	210	1631
GCA_026427515.1	GCA_026427515.1_00134	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	137	131	90.84	92.44	119	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP084443.1	142763	143176
GCA_026427515.1	GCA_026427515.1_00160	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	98.86	54.18	347	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP084443.1	166322	167395
GCA_026427515.1	GCA_026427515.1_00712	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	139	139	99.28	68.12	138	WP_000616116.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP084443.1	718749	719168
GCA_026427515.1	GCA_026427515.1_02592	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.30	72.77	426	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP084443.1	2608381	2609673
GCA_000277735.2	GCA_000277735.2_00281	aac(2)-Ic	aminoglycoside N-acetyltransferase AAC(2)-Ic	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/TOBRAMYCIN	EXACTP	181	181	100.00	100.00	181	WP_003899880.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	NF000034.1	aminoglycoside N-acetyltransferase AAC(2)-Ic	CP003248.2	314309	314854
GCA_000277735.2	GCA_000277735.2_02097	erm(37)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	PARTIALP	150	179	83.80	99.33	150	WP_003900446.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37)	NA	NA	CP003248.2	2231775	2232227
GCA_000277735.2	GCA_000277735.2_02181	blaC	class A beta-lactamase BlaC	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	307	307	100.00	100.00	307	WP_003410677.1	class A beta-lactamase BlaC	NF041154.1	class A beta-lactamase BlaC	CP003248.2	2325894	2326817
GCA_001469615.1	GCA_001469615.1_00132	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP012352.1	145028	145450
GCA_030223985.1	GCA_030223985.1_00166	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	JASOTK010000001.1	162646	164565
GCA_030223985.1	GCA_030223985.1_01740	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	JASOTK010000007.1	25977	26708
GCA_000425005.1	GCA_000425005.1_00178	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_002292226.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	AUKY01000003.1	19904	20641
GCA_000425005.1	GCA_000425005.1_01823	tet(32)	tetracycline resistance ribosomal protection protein Tet(32)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002602099.1	tetracycline resistance ribosomal protection protein Tet(32)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	AUKY01000073.1	896	2815
GCA_000220255.1	GCA_000220255.1_01755	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	GL982513.1	2150840	2151805
GCA_000220255.1	GCA_000220255.1_02299	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	657	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	GL982514.1	469777	471750
GCA_004166915.1	GCA_004166915.1_00382	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RCYT01000002.1	33473	34936
GCA_004166915.1	GCA_004166915.1_00383	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RCYT01000002.1	35056	36273
GCA_000759245.1	GCA_000759245.1_01270	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_002560998.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	JRNQ01000035.1	1813	3738
GCA_000759245.1	GCA_000759245.1_01942	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JRNQ01000082.1	75	1040
GCA_000759245.1	GCA_000759245.1_02025	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JRNQ01000097.1	2012	2812
GCA_000258845.1	GCA_000258845.1_00849	copP	copper-binding metallochaperone CopP	plus	STRESS	METAL	COPPER	COPPER	BLASTP	66	66	100.00	95.45	66	AAD05936.1	copper-binding metallochaperone CopP	NF033781.1	copper-binding metallochaperone CopP	AIHX01000094.1	11843	12043
GCA_947254575.1	GCA_947254575.1_01572	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CAMYDY010000025.1	14191	16116
GCA_947254575.1	GCA_947254575.1_02004	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CAMYDY010000051.1	61	1026
GCA_001717565.1	GCA_001717565.1_02656	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	120	100.00	48.03	127	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP017041.1	67251	67673
GCA_024204785.1	GCA_024204785.1_00034	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	BLASTP	132	134	98.51	100.00	132	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein	CP093181.1	38129	38527
GCA_024204785.1	GCA_024204785.1_00035	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ia	CP093181.1	38750	39493
GCA_024204785.1	GCA_024204785.1_00040	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP093181.1	42843	44849
GCA_024204785.1	GCA_024204785.1_00041	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1	CP093181.1	44949	46706
GCA_024204785.1	GCA_024204785.1_00042	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI	CP093181.1	46706	47077
GCA_024204785.1	GCA_024204785.1_00058	fosD	fosfomycin resistance bacillithiol transferase FosD	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000616116.1	fosfomycin resistance bacillithiol transferase FosD	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP093181.1	61878	62297
GCA_024204785.1	GCA_024204785.1_00097	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093181.1	94595	95377
GCA_024204785.1	GCA_024204785.1_00098	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093181.1	95503	96234
GCA_024204785.1	GCA_024204785.1_00122	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	111	128	86.72	99.10	111	ADA79992.1	mercuric transport protein MerT	NA	NA	CP093181.1	117432	117767
GCA_024204785.1	GCA_024204785.1_00123	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP093181.1	117825	119468
GCA_024204785.1	GCA_024204785.1_00124	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB	CP093181.1	119550	120200
GCA_024204785.1	GCA_024204785.1_01366	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093181.1	1379666	1380397
GCA_024204785.1	GCA_024204785.1_01367	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093181.1	1380523	1381305
GCA_024204785.1	GCA_024204785.1_01689	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093181.1	1681859	1682239
GCA_024204785.1	GCA_024204785.1_01690	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.89	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093181.1	1682229	1683986
GCA_024204785.1	GCA_024204785.1_01691	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093181.1	1684093	1684938
GCA_024204785.1	GCA_024204785.1_01809	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP093181.1	1763354	1764793
GCA_024204785.1	GCA_024204785.1_01812	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	CP093181.1	1766549	1767034
GCA_024204785.1	GCA_024204785.1_02091	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase	CP093181.1	2035556	2036338
GCA_024204785.1	GCA_024204785.1_02092	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	BLASTP	243	243	100.00	99.59	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP093181.1	2036464	2037195
GCA_024204785.1	GCA_024204785.1_02509	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP093181.1	2491731	2492798
GCA_024204785.1	GCA_024204785.1_02559	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	PARTIALP	78	142	54.93	98.72	78	WP_002437790.1	FosB family fosfomycin resistance bacillithiol transferase	NA	NA	CP093181.1	2550595	2550831
GCA_024204785.1	GCA_024204785.1_02636	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP093181.1	2634410	2634757
GCA_024204785.1	GCA_024204785.1_02639	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	86.48	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP093181.1	2636935	2638224
GCA_024204785.1	GCA_024204785.1_02735	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093182.1	15904	16284
GCA_024204785.1	GCA_024204785.1_02736	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093182.1	16274	18031
GCA_024204785.1	GCA_024204785.1_02737	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093182.1	18138	18983
GCA_024204785.1	GCA_024204785.1_02740	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP093182.1	20691	21251
GCA_024204785.1	GCA_024204785.1_02741	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP093182.1	21435	22979
GCA_947095725.1	GCA_947095725.1_00618	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	91.89	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAMUPY010000024.1	7432	8628
GCA_003494525.1	GCA_003494525.1_00463	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.91	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQHY01000001.1	491348	492742
GCA_003433955.1	GCA_003433955.1_00119	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.83	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	QVEU01000001.1	107451	109091
GCA_003433955.1	GCA_003433955.1_00689	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	QVEU01000002.1	169849	170580
GCA_003433955.1	GCA_003433955.1_00697	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691727.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	QVEU01000002.1	176154	178073
GCA_003433955.1	GCA_003433955.1_01472	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	123	123	100.00	50.79	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	QVEU01000005.1	54201	54572
GCA_962728725.1	GCA_962728725.1_00110	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUIZB010000001.1	100890	102416
GCA_962728725.1	GCA_962728725.1_00320	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUIZB010000002.1	85723	86355
GCA_962728725.1	GCA_962728725.1_00321	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUIZB010000002.1	86595	87833
GCA_962728725.1	GCA_962728725.1_00546	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	95.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUIZB010000003.1	155554	156459
GCA_962728725.1	GCA_962728725.1_01896	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	96.08	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUIZB010000030.1	11092	12471
GCA_020729705.1	GCA_020729705.1_00720	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	521	639	81.53	99.62	521	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NA	NA	JAJEPB010000017.1	483	2048
GCA_020729705.1	GCA_020729705.1_02224	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	JAJEPB010000009.1	925	1662
GCA_902479665.1	GCA_902479665.1_00214	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	123	123	100.00	53.17	126	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CABSPS010000001.1	259810	260181
GCA_902479665.1	GCA_902479665.1_00502	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CABSPS010000002.1	268925	269656
GCA_009730535.1	GCA_009730535.1_01738	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	631	631	100.00	95.56	631	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP046328.1	1767968	1769863
GCA_902489385.1	GCA_902489385.1_00572	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CABTZY010000009.1	44052	45473
GCA_000385925.1	GCA_000385925.1_01637	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038795.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP004409.1	1593894	1594631
GCA_000385925.1	GCA_000385925.1_01648	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_002414694.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP004409.1	1604548	1606467
GCA_030232105.1	GCA_030232105.1_01457	aac(3)-XI	aminoglycoside N-acetyltransferase AAC(3)-XI	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	EXACTP	148	148	100.00	100.00	148	WP_046095284.1	aminoglycoside N-acetyltransferase AAC(3)-XI	NF000482.1	aminoglycoside N-acetyltransferase AAC(3)-XI	JASPJD010000029.1	6803	7249
GCA_030232105.1	GCA_030232105.1_01459	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPJD010000029.1	8049	8903
GCA_030232105.1	GCA_030232105.1_01460	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	99.03	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	JASPJD010000029.1	9166	10707
GCA_030232105.1	GCA_030232105.1_01962	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JASPJD010000040.1	2480	4399
GCA_030232105.1	GCA_030232105.1_02000	aph(3)-Ib	aminoglycoside O-phosphotransferase APH(3)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	139	267	52.06	100.00	139	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3)-Ib	NA	NA	JASPJD010000047.1	849	1268
GCA_030232105.1	GCA_030232105.1_02001	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	BLASTP	278	278	100.00	99.64	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase	JASPJD010000047.1	1268	2104
GCA_030232105.1	GCA_030232105.1_02003	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	391	391	100.00	99.74	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPJD010000047.1	2308	3483
GCA_030232105.1	GCA_030232105.1_02007	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	593	593	100.00	100.00	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	JASPJD010000048.1	1919	3700
GCA_030232105.1	GCA_030232105.1_02491	aph(3)-Ia	aminoglycoside O-phosphotransferase APH(3)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018326.1	aminoglycoside O-phosphotransferase APH(3)-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3)-Ia	JASPJD010000071.1	94	909
GCA_900454145.1	GCA_900454145.1_01141	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.68	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	UGRO01000002.1	1229487	1230392
GCA_900454145.1	GCA_900454145.1_01269	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	95.87	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	UGRO01000002.1	1388794	1390032
GCA_900454145.1	GCA_900454145.1_01270	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	UGRO01000002.1	1390279	1390911
GCA_900454145.1	GCA_900454145.1_01461	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.05	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	UGRO01000002.1	1588296	1589822
GCA_963392925.1	GCA_963392925.1_00276	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.55	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJNZ010000002.1	19873	21252
GCA_963392925.1	GCA_963392925.1_00782	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.36	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJNZ010000005.1	7490	8728
GCA_963392925.1	GCA_963392925.1_00783	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJNZ010000005.1	8745	9608
GCA_963392925.1	GCA_963392925.1_01094	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	97.44	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJNZ010000007.1	36633	38159
GCA_963392925.1	GCA_963392925.1_01682	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJNZ010000014.1	19016	19921
GCA_018373235.1	GCA_018373235.1_01671	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	JAHAHM010000001.1	59108	60487
GCA_916050515.1	GCA_916050515.1_00330	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CAJZLG010000004.1	54597	55787
GCA_002073595.2	GCA_002073595.2_00476	mtrF	AbgT family antimetabolite efflux transporter MtrF	plus	STRESS	BIOCIDE	EFFLUX	EFFLUX	BLASTP	522	533	97.94	96.74	522	ACF30256.1	AbgT family antimetabolite efflux transporter MtrF	NA	NA	CP020421.2	493923	495491
GCA_002073595.2	GCA_002073595.2_00478	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.62	210	ACF30254.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CP020421.2	496316	496948
GCA_002073595.2	GCA_002073595.2_00479	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	412	412	100.00	100.00	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CP020421.2	497352	498590
GCA_002073595.2	GCA_002073595.2_00614	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CP020421.2	639970	640875
GCA_002073595.2	GCA_002073595.2_01409	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	94.77	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CP020421.2	1454917	1456296
GCA_002073595.2	GCA_002073595.2_01906	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	EXACTP	508	508	100.00	100.00	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CP020421.2	1961671	1963197
GCA_003944075.1	GCA_003944075.1_01713	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJOT01000010.1	1621	2838
GCA_003944075.1	GCA_003944075.1_01714	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJOT01000010.1	2958	4421
GCA_002176835.1	GCA_002176835.1_00023	vat(E)	streptogramin A O-acetyltransferase Vat(E)	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	BLASTP	214	214	100.00	99.07	214	WP_063856929.1	streptogramin A O-acetyltransferase Vat(E)	NF000020.1	streptogramin A O-acetyltransferase Vat(E)	CP021704.1	22291	22935
GCA_002176835.1	GCA_002176835.1_00512	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	639	99.84	99.69	638	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	CP021704.1	526245	528170
GCA_002176835.1	GCA_002176835.1_01822	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	458	458	100.00	99.13	458	WP_002294500.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)	CP021704.1	1806035	1807411
GCA_002176835.1	GCA_002176835.1_01836	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_001829870.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	CP021704.1	1825309	1825794
GCA_002176835.1	GCA_002176835.1_01839	erm(T)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	245	244	98.77	98.76	241	WP_002345002.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(T)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP021704.1	1827787	1828524
GCA_002176835.1	GCA_002176835.1_01985	vat(E)	streptogramin A O-acetyltransferase Vat(E)	core	AMR	AMR	STREPTOGRAMIN	STREPTOGRAMIN	PARTIALP	130	214	60.75	99.23	130	WP_063856929.1	streptogramin A O-acetyltransferase Vat(E)	NA	NA	CP021704.1	1981603	1981995
GCA_905372985.1	GCA_905372985.1_02108	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CAJPQZ010000079.1	2242	3042
GCA_015260495.1	GCA_015260495.1_01336	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	396	108	68.52	90.54	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	JABZWL010000038.1	16269	17459
GCA_014654435.1	GCA_014654435.1_00137	copP	copper-binding metallochaperone CopP	plus	STRESS	METAL	COPPER	COPPER	BLASTP	66	66	100.00	95.45	66	AAD05936.1	copper-binding metallochaperone CopP	NF033781.1	copper-binding metallochaperone CopP	BNAZ01000002.1	57783	57983
GCA_900110795.1	GCA_900110795.1_01455	blaOXA	class D beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	260	262	99.62	58.62	261	WP_003161096.1	class D beta-lactamase	NF012161.0	class D beta-lactamase	FOEV01000004.1	84371	85153
GCA_900110795.1	GCA_900110795.1_03097	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	CAA77325.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	FOEV01000019.1	30464	30700
GCA_900110795.1	GCA_900110795.1_03098	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	121	121	100.00	100.00	121	ABF13034.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	FOEV01000019.1	30697	31062
GCA_900110795.1	GCA_900110795.1_03099	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	561	561	100.00	98.57	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	FOEV01000019.1	31080	32765
GCA_900110795.1	GCA_900110795.1_03100	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	91	91	100.00	100.00	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	FOEV01000019.1	32837	33112
GCA_900110795.1	GCA_900110795.1_03101	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	CAA70196.1	mercuric transport protein MerT	NA	NA	FOEV01000019.1	33125	33475
GCA_900110795.1	GCA_900110795.1_03102	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	144	144	100.00	100.00	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	FOEV01000019.1	33547	33981
GCA_900110795.1	GCA_900110795.1_04193	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	410	414	95.89	71.36	398	AAG05881.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	FOEV01000008.1	214176	215408
GCA_900110795.1	GCA_900110795.1_04302	clpK	heat shock survival AAA family ATPase ClpK	plus	STRESS	HEAT	NA	NA	HMM	964	949	99.16	87.20	945	ASF80763.1	heat shock survival AAA family ATPase ClpK	NF033606.1	heat shock survival AAA family ATPase ClpK	FOEV01000023.1	11054	13948
GCA_900110795.1	GCA_900110795.1_04426	blaLUT-3	class A beta-lactamase LUT-3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	296	296	100.00	100.00	296	WP_063860829.1	class A beta-lactamase LUT-3	NF000324.2	LUT family class A beta-lactamase	FOEV01000016.1	91210	92100
GCA_003971345.1	GCA_003971345.1_01439	blaBRO-1	class A beta-lactamase BRO-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	313	313	100.00	100.00	313	WP_003657002.1	class A beta-lactamase BRO-1	NF033103.1	class A beta-lactamase	CP034663.1	1547657	1548598
GCA_024330875.1	GCA_024330875.1_01929	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/LINCOSAMIDE/STREPTOGRAMIN/TYLOSIN	BLASTP	244	244	100.00	99.18	244	WP_063844791.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	NF045543.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	JANDXB010000039.1	12784	13518
GCA_024330875.1	GCA_024330875.1_02465	cfxA3	extended-spectrum class A beta-lactamase CfxA3	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	EXACTP	321	321	100.00	100.00	321	WP_004348227.1	extended-spectrum class A beta-lactamase CfxA3	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	JANDXB010000057.1	92	1057
GCA_000407005.1	GCA_000407005.1_00411	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	496	500	99.40	66.53	502	WP_002296175.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	KE136389.1	411545	413035
GCA_000407005.1	GCA_000407005.1_00625	catA	type A chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	HMM	215	219	99.09	52.07	217	WP_063843219.1	type A chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase	KE136389.1	632176	632823
GCA_000407005.1	GCA_000407005.1_01777	vanS	vancomycin resistance histidine kinase VanS	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	374	376	96.81	56.99	365	WP_034869172.1	vancomycin resistance histidine kinase VanS	NF033091.0	vancomycin resistance histidine kinase VanS	KE136389.1	1750916	1752040
GCA_000407005.1	GCA_000407005.1_02683	arr	NAD(+)--rifampin ADP-ribosyltransferase	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	HMM	138	143	93.01	54.89	133	WP_063842202.1	NAD(+)--rifampin ADP-ribosyltransferase	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase	KE136392.1	155467	155883
GCA_029928945.1	GCA_029928945.1_00001	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREDE010000010.1	131	976
GCA_029928945.1	GCA_029928945.1_00002	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREDE010000010.1	1083	2840
GCA_029928945.1	GCA_029928945.1_00003	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREDE010000010.1	2830	3210
GCA_029928945.1	GCA_029928945.1_01579	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREDE010000002.1	574843	575916
GCA_029928945.1	GCA_029928945.1_01629	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAREDE010000002.1	635116	635538
GCA_029928945.1	GCA_029928945.1_02103	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	76.69	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDE010000004.1	55594	56883
GCA_029928945.1	GCA_029928945.1_02383	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	96.18	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JAREDE010000007.1	5654	6049
GCA_029928945.1	GCA_029928945.1_02384	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	89.98	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREDE010000007.1	6066	7358
GCA_029928945.1	GCA_029928945.1_02388	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	45.45	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREDE010000007.1	11041	11388
GCA_000007045.1	GCA_000007045.1_00905	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	EXACTP	399	399	100.00	100.00	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	AE007317.1	866211	867410
GCA_001067855.1	GCA_001067855.1_00922	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	552	631	87.48	93.48	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JUOQ01000026.1	4246	5904
GCA_001067855.1	GCA_001067855.1_01107	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	595	639	92.80	98.82	593	WP_050618045.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	JUOQ01000036.1	6213	8000
GCA_022690445.1	GCA_022690445.1_00080	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JALCVK010000010.1	79289	79669
GCA_022690445.1	GCA_022690445.1_00081	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JALCVK010000010.1	79659	81416
GCA_022690445.1	GCA_022690445.1_00082	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JALCVK010000010.1	81523	82368
GCA_022690445.1	GCA_022690445.1_01091	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JALCVK010000022.1	7989	8549
GCA_022690445.1	GCA_022690445.1_01092	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JALCVK010000022.1	8733	10277
GCA_022690445.1	GCA_022690445.1_01573	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JALCVK010000003.1	5445	5846
GCA_022690445.1	GCA_022690445.1_01574	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVK010000003.1	5864	7156
GCA_022690445.1	GCA_022690445.1_01655	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.09	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JALCVK010000003.1	80575	81867
GCA_022690445.1	GCA_022690445.1_02468	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein	JALCVK010000009.1	75994	76635
GCA_958454085.1	GCA_958454085.1_02043	erm(52)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(52)	core	AMR	AMR	MACROLIDE	MACROLIDE	PARTIALP	274	309	88.67	97.08	274	WP_002571018.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(52)	NA	NA	CAUEAH010000023.1	1176	2000
GCA_000196295.1	GCA_000196295.1_00396	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	96.46	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	FN995097.1	351383	352909
GCA_000196295.1	GCA_000196295.1_00582	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	210	210	100.00	97.14	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	FN995097.1	544776	545408
GCA_000196295.1	GCA_000196295.1_00583	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.60	412	AAF42063.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	FN995097.1	545655	546893
GCA_000196295.1	GCA_000196295.1_00728	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.35	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	FN995097.1	715641	716546
GCA_000221145.2	GCA_000221145.2_01502	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	409	585	69.57	99.51	407	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NA	NA	AFUN01000018.1	299	1528
GCA_000221145.2	GCA_000221145.2_01503	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	AFUN01000018.1	1572	1952
GCA_000221145.2	GCA_000221145.2_01507	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	PARTIALP	401	514	75.68	100.00	389	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NA	NA	AFUN01000018.1	4865	6070
GCA_000221145.2	GCA_000221145.2_01509	lnu(A)	lincosamide nucleotidyltransferase Lnu(A)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	EXACTP	161	161	100.00	100.00	161	WP_011645010.1	lincosamide nucleotidyltransferase Lnu(A)	NF000236.1	lincosamide nucleotidyltransferase Lnu(A)	AFUN01000017.1	188	673
GCA_000221145.2	GCA_000221145.2_01521	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	164	281	58.36	98.78	164	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	NA	AFUN01000015.1	201	695
GCA_000221145.2	GCA_000221145.2_02332	blaTEM	TEM family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	166	286	56.99	100.00	163	WP_000027050.1	broad-spectrum class A beta-lactamase TEM-116	NA	NA	AFUN01000003.1	1081	1581
GCA_003417575.1	GCA_003417575.1_02153	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	256	267	96.25	56.81	257	WP_012479999.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	QVNA01000018.1	7167	7937
GCA_003417575.1	GCA_003417575.1_04118	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	380	397	94.21	58.82	374	WP_104009838.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	QVNA01000050.1	20581	21723
GCA_003417575.1	GCA_003417575.1_05390	fos	fosfomycin resistance glutathione transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	136	135	99.26	63.70	135	WP_015741374.1	fosfomycin resistance glutathione transferase	NF000496.1	fosfomycin resistance glutathione transferase	QVNA01000096.1	12947	13357
GCA_003417575.1	GCA_003417575.1_05492	mexE	multidrug efflux RND transporter periplasmic adaptor subunit MexE	plus	AMR	AMR	EFFLUX	EFFLUX	HMM	413	413	100.00	80.05	416	CAK15125.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	NF045904.1	multidrug efflux RND transporter periplasmic adaptor subunit MexE	QVNA01000102.1	11342	12583
GCA_024104975.1	GCA_024104975.1_01237	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	136	120	100.00	44.12	136	AAB09625.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAHDTX010000028.1	5874	6284
GCA_029924985.1	GCA_029924985.1_00189	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.39	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHW010000011.1	60451	61740
GCA_029924985.1	GCA_029924985.1_00371	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.93	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JAREHW010000014.1	24259	25104
GCA_029924985.1	GCA_029924985.1_00372	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096392.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JAREHW010000014.1	25211	26968
GCA_029924985.1	GCA_029924985.1_00373	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JAREHW010000014.1	26958	27338
GCA_029924985.1	GCA_029924985.1_00440	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	205	205	100.00	94.15	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	JAREHW010000016.1	8354	8971
GCA_029924985.1	GCA_029924985.1_00482	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.39	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JAREHW010000017.1	13138	13698
GCA_029924985.1	GCA_029924985.1_00483	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	504	514	98.05	99.01	504	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JAREHW010000017.1	13912	15426
GCA_029924985.1	GCA_029924985.1_00497	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	107	107	100.00	98.13	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	JAREHW010000019.1	121	444
GCA_029924985.1	GCA_029924985.1_01544	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	84.85	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JAREHW010000003.1	179075	180364
GCA_029924985.1	GCA_029924985.1_01548	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	JAREHW010000003.1	182530	182877
GCA_029924985.1	GCA_029924985.1_01607	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	JAREHW010000003.1	246748	247170
GCA_029924985.1	GCA_029924985.1_01650	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	JAREHW010000003.1	300573	301646
GCA_024758985.1	GCA_024758985.1_00317	aadS	aminoglycoside 6-adenylyltransferase AadS	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	287	287	100.00	100.00	287	WP_003013318.1	aminoglycoside 6-adenylyltransferase AadS	NF033387.1	AadS family aminoglycoside 6-adenylyltransferase	CP103080.1	327927	328790
GCA_024758985.1	GCA_024758985.1_00318	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	core	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	378	388	97.42	100.00	378	WP_008651082.1	tetracycline-inactivating monooxygenase Tet(X2)	NF033111.2	tetracycline-inactivating monooxygenase Tet(X)	CP103080.1	328966	330102
GCA_024758985.1	GCA_024758985.1_00320	tet(X1)	tetracycline-inactivating monooxygenase Tet(X1)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	291	379	72.30	99.64	274	WP_204376222.1	tetracycline-inactivating monooxygenase Tet(X1)	NA	NA	CP103080.1	330566	331441
GCA_024758985.1	GCA_024758985.1_00321	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_063844771.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	CP103080.1	331747	332547
GCA_024758985.1	GCA_024758985.1_00335	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	641	641	100.00	100.00	641	WP_004293868.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103080.1	348392	350317
GCA_024758985.1	GCA_024758985.1_01152	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP103080.1	1145927	1147852
GCA_024758985.1	GCA_024758985.1_01430	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	167	321	52.02	100.00	167	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NA	NA	CP103080.1	1491685	1492188
GCA_024758985.1	GCA_024758985.1_03491	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	310	321	95.64	84.69	307	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103080.1	3697096	3698028
GCA_024758985.1	GCA_024758985.1_03543	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	253	321	77.26	100.00	248	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NA	NA	CP103080.1	3751280	3752041
GCA_024758985.1	GCA_024758985.1_05231	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	92.10	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP103080.1	5399207	5400538
GCA_024758985.1	GCA_024758985.1_05519	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	321	321	100.00	100.00	321	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NF033100.1	CfxA family broad-spectrum class A beta-lactamase	CP103080.1	5705981	5706946
GCA_024758985.1	GCA_024758985.1_05716	cfxA	CfxA family broad-spectrum class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	PARTIALP	242	321	73.83	99.58	237	WP_004339683.1	CfxA family broad-spectrum class A beta-lactamase	NA	NA	CP103080.1	5883327	5884055
GCA_002952715.2	GCA_002952715.2_00768	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	78.79	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP025031.1	749810	751102
GCA_002952715.2	GCA_002952715.2_00851	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP025031.1	825726	827018
GCA_002952715.2	GCA_002952715.2_00852	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	92.25	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP025031.1	827036	827437
GCA_002952715.2	GCA_002952715.2_00896	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)	CP025031.1	866051	867430
GCA_002952715.2	GCA_002952715.2_00910	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP025031.1	879415	881421
GCA_002952715.2	GCA_002952715.2_01011	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	CP025031.1	978231	979670
GCA_002952715.2	GCA_002952715.2_01020	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP025031.1	988163	988543
GCA_002952715.2	GCA_002952715.2_01021	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP025031.1	988533	990290
GCA_002952715.2	GCA_002952715.2_01022	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP025031.1	990397	991242
GCA_002952715.2	GCA_002952715.2_02739	qacB	quaternary ammonium compound efflux MFS transporter QacB	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	514	514	100.00	99.42	514	WP_000622778.1	quaternary ammonium compound efflux MFS transporter QacB	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	CP025033.1	11492	13036
GCA_002952715.2	GCA_002952715.2_02740	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP025033.1	13219	13779
GCA_002952715.2	GCA_002952715.2_02742	mph(C)	Mph(C) family macrolide 2-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2-phosphotransferase	NF000240.1	Mph(C) family macrolide 2-phosphotransferase	CP025033.1	15083	15982
GCA_002952715.2	GCA_002952715.2_02743	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)	CP025033.1	16081	17547
GCA_002952715.2	GCA_002952715.2_02774	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.39	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	CP025033.1	40148	40708
GCA_001314995.1	GCA_001314995.1_01141	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	91.87	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP012938.1	1357963	1359294
GCA_001314995.1	GCA_001314995.1_04742	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.56	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP012938.1	6126905	6127786
GCA_002754815.1	GCA_002754815.1_02872	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	306	305	97.38	54.46	303	WP_010926363.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP024588.1	3151115	3152035
GCA_002754815.1	GCA_002754815.1_04812	aph(3)	APH(3) family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	266	267	96.63	76.36	258	WP_001082319.1	APH(3) family aminoglycoside O-phosphotransferase	NF032896.1	APH(3) family aminoglycoside O-phosphotransferase	CP024589.1	3195	3995
GCA_020149745.1	GCA_020149745.1_02798	bexA	multidrug efflux MATE transporter BexA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	443	443	100.00	91.87	443	BAB64566.1	multidrug efflux MATE transporter BexA	NA	NA	CP083813.1	3719479	3720810
GCA_020149745.1	GCA_020149745.1_04211	bla	class A beta-lactamase, subclass A2	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	293	300	96.00	80.56	288	WP_005816369.1	class A beta-lactamase, subclass A2	NF012099.1	class A beta-lactamase, subclass A2	CP083813.1	5423518	5424399
GCA_001552955.1	GCA_001552955.1_01300	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KQ959723.1	212	1066
GCA_001552955.1	GCA_001552955.1_01301	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	99.84	639	WP_000691721.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KQ959723.1	1231	3150
GCA_000736475.1	GCA_000736475.1_01536	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JPOW01000002.1	291740	293032
GCA_000736475.1	GCA_000736475.1_01947	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	JPOW01000003.1	121361	122347
GCA_000736475.1	GCA_000736475.1_01948	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	JPOW01000003.1	122447	124453
GCA_000736475.1	GCA_000736475.1_02454	aac(6)-Ie/aph(2)-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6)-Ie/aminoglycoside O-phosphotransferase APH(2)-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2)-Ia	JPOW01000008.1	205	1644
GCA_000736475.1	GCA_000736475.1_02476	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_031464190.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter	JPOW01000008.1	20242	21786
GCA_000736475.1	GCA_000736475.1_02477	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA	JPOW01000008.1	21970	22530
GCA_000736475.1	GCA_000736475.1_02480	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JPOW01000008.1	24308	24688
GCA_000736475.1	GCA_000736475.1_02481	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JPOW01000008.1	24678	26435
GCA_000736475.1	GCA_000736475.1_02482	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JPOW01000008.1	26542	27387
GCA_001807295.1	GCA_001807295.1_00079	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	480	631	73.22	45.99	474	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV788458.1	10230	11672
GCA_001807295.1	GCA_001807295.1_00561	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	284	284	100.00	100.00	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV788479.1	214	1068
GCA_001807295.1	GCA_001807295.1_01707	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.49	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	KV788501.1	479	2260
GCA_900543065.1	GCA_900543065.1_01480	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	91.16	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	UQPW01000041.1	9848	11584
GCA_900543065.1	GCA_900543065.1_01481	tetA(46)	tetracycline efflux ABC transporter Tet(46) subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	574	574	100.00	91.11	574	WP_063856469.1	tetracycline efflux ABC transporter Tet(46) subunit A	NF000474.1	tetracycline efflux ABC transporter Tet(46) subunit A	UQPW01000041.1	11586	13310
GCA_001679135.1	GCA_001679135.1_01597	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	95.26	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LZDL01000028.1	79553	80947
GCA_028325525.1	GCA_028325525.1_01227	lsa(C)	ABC-F type ribosomal protection protein Lsa(C)	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	BLASTP	492	492	100.00	99.59	492	WP_063851347.1	ABC-F type ribosomal protection protein Lsa(C)	NF000167.2	Lsa family ABC-F type ribosomal protection protein	JAQMJL010000003.1	138536	140014
GCA_028325525.1	GCA_028325525.1_01601	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	JAQMJL010000005.1	64253	65470
GCA_028325525.1	GCA_028325525.1_01602	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	JAQMJL010000005.1	65590	67053
GCA_900461255.1	GCA_900461255.1_00033	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	UIGW01000001.1	7214	8995
GCA_900461255.1	GCA_900461255.1_00093	tetA	tetracycline efflux ABC transporter TetAB subunit A	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	513	513	100.00	96.88	513	WP_011116969.1	tetracycline efflux ABC transporter TetAB subunit A	NF000506.1	tetracycline efflux ABC transporter TetAB subunit A	UIGW01000001.1	67907	69448
GCA_900461255.1	GCA_900461255.1_01146	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	473	547	84.28	44.92	472	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	UIGW01000001.1	1264857	1266278
GCA_900461255.1	GCA_900461255.1_01151	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.83	284	WP_063844894.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	UIGW01000001.1	1270738	1271592
GCA_900461255.1	GCA_900461255.1_01183	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_011113071.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	UIGW01000001.1	1299337	1300512
GCA_900461255.1	GCA_900461255.1_02218	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	UIGW01000001.1	2468923	2470704
GCA_900461255.1	GCA_900461255.1_02222	pbp2m	penicillin-binding protein PBP2M	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	593	593	100.00	99.66	593	WP_049151672.1	penicillin-binding protein PBP2M	NA	NA	UIGW01000001.1	2474217	2475998
GCA_003942275.1	GCA_003942275.1_01105	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	RJMN01000004.1	3188	4651
GCA_003942275.1	GCA_003942275.1_01106	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	RJMN01000004.1	4771	5988
GCA_022405595.1	GCA_022405595.1_00019	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	257	257	100.00	100.00	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP062393.1	19129	19902
GCA_022405595.1	GCA_022405595.1_00023	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	163	163	100.00	100.00	163	CAA24957.1	staphylokinase	NA	NA	CP062393.1	21611	22102
GCA_022405595.1	GCA_022405595.1_00027	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP062393.1	23599	23949
GCA_022405595.1	GCA_022405595.1_00187	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP062393.1	152459	153394
GCA_022405595.1	GCA_022405595.1_00188	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP062393.1	153396	154379
GCA_022405595.1	GCA_022405595.1_00198	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	235	235	100.00	100.00	235	ABD31004.1	serine protease SplA	NA	NA	CP062393.1	166028	166735
GCA_022405595.1	GCA_022405595.1_00199	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP062393.1	166860	167582
GCA_022405595.1	GCA_022405595.1_00202	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	99.58	238	ABD30999.1	serine protease SplE	NA	NA	CP062393.1	169357	170073
GCA_022405595.1	GCA_022405595.1_00246	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP062393.1	207314	208606
GCA_022405595.1	GCA_022405595.1_00418	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP062393.1	400918	401670
GCA_022405595.1	GCA_022405595.1_01660	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP062393.1	1662833	1663444
GCA_022405595.1	GCA_022405595.1_01698	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP062393.1	1696618	1697973
GCA_022405595.1	GCA_022405595.1_01901	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP062393.1	1926403	1927761
GCA_022405595.1	GCA_022405595.1_02035	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP062393.1	2073515	2074567
GCA_022405595.1	GCA_022405595.1_02069	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP062393.1	2117367	2118896
GCA_022405595.1	GCA_022405595.1_02213	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1115	1115	100.00	99.19	1115	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP062393.1	2276795	2280142
GCA_022405595.1	GCA_022405595.1_02290	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.23	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP062393.1	2357497	2358474
GCA_022405595.1	GCA_022405595.1_02291	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP062393.1	2358476	2359423
GCA_022405595.1	GCA_022405595.1_02292	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP062393.1	2359992	2360957
GCA_022405595.1	GCA_022405595.1_02379	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP062393.1	2450199	2450618
GCA_022405595.1	GCA_022405595.1_02554	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP062393.1	2602426	2603868
GCA_022405595.1	GCA_022405595.1_02702	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP062393.1	2756375	2756509
GCA_022405595.1	GCA_022405595.1_02760	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	205	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA	CP062394.1	2560	3177
GCA_022405595.1	GCA_022405595.1_02767	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP062394.1	9269	10114
GCA_022405595.1	GCA_022405595.1_02768	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP062394.1	10221	11978
GCA_022405595.1	GCA_022405595.1_02769	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP062394.1	11968	12348
GCA_022405595.1	GCA_022405595.1_02775	ser	staphylococcal enterotoxin type R	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	259	259	100.00	99.61	259	EVY93839.1	staphylococcal enterotoxin type R	NA	NA	CP062394.1	16342	17121
GCA_022405595.1	GCA_022405595.1_02776	sej	staphylococcal enterotoxin type J	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	268	268	100.00	100.00	268	AAC78590.1	staphylococcal enterotoxin type J	NA	NA	CP062394.1	17211	18017
GCA_022405595.1	GCA_022405595.1_02779	sed	staphylococcal enterotoxin type D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	258	258	100.00	98.84	258	AAB06195.1	staphylococcal enterotoxin type D	NA	NA	CP062394.1	18911	19687
GCA_000146975.1	GCA_000146975.1_00889	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_000810833.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	CP002121.1	856174	856905
GCA_000146975.1	GCA_000146975.1_00995	pmrA	multidrug efflux MFS transporter PmrA	plus	AMR	AMR	QUINOLONE	QUINOLONE	BLASTP	399	399	100.00	99.75	399	AAK99679.1	multidrug efflux MFS transporter PmrA	NA	NA	CP002121.1	952019	953218
GCA_015274175.1	GCA_015274175.1_00597	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	82.05	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPT010000001.1	630151	631443
GCA_015274175.1	GCA_015274175.1_02371	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	JACGPT010000009.1	9807	10652
GCA_015274175.1	GCA_015274175.1_02372	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	JACGPT010000009.1	10759	12516
GCA_015274175.1	GCA_015274175.1_02373	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	JACGPT010000009.1	12506	12886
GCA_015274175.1	GCA_015274175.1_02395	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	90.70	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	JACGPT010000009.1	37878	38279
GCA_015274175.1	GCA_015274175.1_02396	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.47	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	JACGPT010000009.1	38297	39586
GCA_015274175.1	GCA_015274175.1_02397	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	94.23	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	JACGPT010000009.1	39586	39900
GCA_015274175.1	GCA_015274175.1_02591	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA	JACGPT010000020.1	1147	1632
GCA_000448565.1	GCA_000448565.1_01120	tetB(46)	tetracycline efflux ABC transporter Tet(46) subunit B	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	578	578	99.83	96.36	577	WP_048717443.1	tetracycline efflux ABC transporter Tet(46) subunit B	NF000475.1	tetracycline efflux ABC transporter Tet(46) subunit B	CM002128.1	1119034	1120770
GCA_963393195.1	GCA_963393195.1_00165	farB	fatty acid resistance MFS efflux transporter permease subunit FarB	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	508	508	100.00	98.03	508	AAF40764.1	fatty acid resistance MFS efflux transporter permease subunit FarB	NA	NA	CAUJOT010000001.1	154634	156160
GCA_963393195.1	GCA_963393195.1_00375	norM	sodium-coupled multidrug efflux MATE transporter NorM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	459	459	100.00	95.42	459	EFF39147.1	sodium-coupled multidrug efflux MATE transporter NorM	NF000263.1	sodium-coupled multidrug efflux MATE transporter NorM	CAUJOT010000002.1	132687	134066
GCA_963393195.1	GCA_963393195.1_01017	mtrR	multidrug efflux system transcriptional repressor MtrR	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	287	210	100.00	98.10	210	CAA81047.1	multidrug efflux system transcriptional repressor MtrR	NA	NA	CAUJOT010000006.1	138742	139605
GCA_963393195.1	GCA_963393195.1_01018	mtrC	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	412	412	100.00	96.12	412	AAA80193.1	multidrug efflux RND transporter periplasmic adaptor subunit MtrC	NA	NA	CAUJOT010000006.1	139622	140860
GCA_963393195.1	GCA_963393195.1_01928	mtrA	efflux transporter MtrCDE transcriptional activator MtrA	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	301	301	100.00	94.02	301	AAD44693.1	efflux transporter MtrCDE transcriptional activator MtrA	NA	NA	CAUJOT010000019.1	5749	6654
GCA_003492365.1	GCA_003492365.1_01787	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	94.40	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	QQMK01000015.1	32417	33811
GCA_011058755.1	GCA_011058755.1_00933	erm(B)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	245	245	100.00	100.00	245	WP_001038790.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NF012220.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	CP049228.1	937210	937947
GCA_011058755.1	GCA_011058755.1_00934	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_000691736.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)	CP049228.1	939054	940973
GCA_011058755.1	GCA_011058755.1_01010	lsa	Lsa family ABC-F type ribosomal protection protein	core	AMR	AMR	LINCOSAMIDE/STREPTOGRAMIN	LINCOSAMIDE/STREPTOGRAMIN	HMM	492	492	100.00	87.40	492	WP_063851347.1	Lsa family ABC-F type ribosomal protection protein	NF000167.2	Lsa family ABC-F type ribosomal protection protein	CP049228.1	1035718	1037196
GCA_025145285.1	GCA_025145285.1_00050	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	641	641	100.00	99.53	641	WP_063856407.1	tetracycline resistance ribosomal protection protein Tet(Q)	NF012154.0	tetracycline resistance ribosomal protection protein Tet(Q)	CP102251.1	52576	54501
GCA_025145285.1	GCA_025145285.1_02079	bla	class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	292	304	97.04	39.39	297	WP_064964607.1	class A beta-lactamase	NF033103.1	class A beta-lactamase	CP102251.1	2531392	2532270
GCA_022014115.1	GCA_022014115.1_01298	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/MACROLIDE/STREPTOGRAMIN	BLASTP	266	266	100.00	99.62	266	WP_002682030.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	NF012223.0	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	JAENYB010000035.1	3164	3964
GCA_022014115.1	GCA_022014115.1_01715	tet	tetracycline resistance ribosomal protection protein	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	HMM	641	641	100.00	89.70	641	WP_063856407.1	tetracycline resistance ribosomal protection protein	NF012153.1	tetracycline resistance ribosomal protection protein	JAENYB010000005.1	3326	5251
GCA_002250115.1	GCA_002250115.1_00056	vanR	vancomycin resistance response regulator transcription factor, VanR-F/VanR-M family	core	AMR	AMR	GLYCOPEPTIDE	VANCOMYCIN	HMM	233	232	100.00	79.83	233	WP_063856726.1	vancomycin resistance response regulator transcription factor, VanR-F/VanR-M family	NF033120.0	vancomycin resistance response regulator transcription factor, VanR-F/VanR-M family	CP019985.1	43992	44693
GCA_002250115.1	GCA_002250115.1_00160	clbB	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbB	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	BLASTP	350	350	100.00	97.14	350	WP_011245929.1	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbB	NF000424.4	Cfr family 23S rRNA (adenine(2503)-C(8))-methyltransferase	CP019985.1	165930	166982
GCA_002250115.1	GCA_002250115.1_00318	drcB	daptomycin efflux ABC transporter permease DrcB	plus	AMR	AMR	NA	NA	BLASTP	641	641	100.00	97.19	641	XSG12257.1	daptomycin efflux ABC transporter permease DrcB	NA	NA	CP019985.1	328397	330322
GCA_002250115.1	GCA_002250115.1_00319	drcA	daptomycin efflux ABC transporter ATP-binding protein DrcA	plus	AMR	AMR	NA	NA	BLASTP	255	255	100.00	98.04	255	XSG12260.1	daptomycin efflux ABC transporter ATP-binding protein DrcA	NA	NA	CP019985.1	330309	331076
GCA_002250115.1	GCA_002250115.1_00320	drcR	daptomycin efflux response regulator transcription factor DrcR	plus	AMR	AMR	NA	NA	BLASTP	223	223	100.00	99.10	223	XSG12259.1	daptomycin efflux response regulator transcription factor DrcR	NA	NA	CP019985.1	331284	331955
GCA_002250115.1	GCA_002250115.1_00321	drcS	daptomycin efflux sensor histidine kinase DrcS	plus	AMR	AMR	NA	NA	BLASTP	341	341	100.00	95.01	341	XSG12258.1	daptomycin efflux sensor histidine kinase DrcS	NA	NA	CP019985.1	331952	332977
GCA_002250115.1	GCA_002250115.1_00423	ant(6)	aminoglycoside 6-nucleotidyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	HMM	284	284	99.65	73.85	283	WP_003229862.1	aminoglycoside 6-nucleotidyltransferase	NF033084.2	aminoglycoside 6-nucleotidyltransferase	CP019985.1	424600	425454
GCA_002250115.1	GCA_002250115.1_01059	aadD2	aminoglycoside O-nucleotidyltransferase ANT(4)-Ib	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	BLASTP	256	256	100.00	94.14	256	WP_035202393.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ib	NF000079.1	aminoglycoside O-nucleotidyltransferase ANT(4)-Ib	CP019985.1	1078084	1078854
GCA_002250115.1	GCA_002250115.1_01061	blaR1	BlaR1 family beta-lactam sensor/signal transducer	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	584	593	98.65	33.61	595	WP_012705551.1	BlaR1 family beta-lactam sensor/signal transducer	NF000326.1	BlaR1 family beta-lactam sensor/signal transducer	CP019985.1	1079338	1081092
GCA_002250115.1	GCA_002250115.1_01062	blaBCL	BCL family class A beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	301	301	100.00	96.68	301	WP_065825670.1	class A beta-lactamase BCL-1	NF033060.0	BCL family class A beta-lactamase	CP019985.1	1081268	1082173
GCA_002250115.1	GCA_002250115.1_02103	erm(34)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(34)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN	EXACTP	281	281	100.00	100.00	281	WP_063844504.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(34)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP019985.1	2128320	2129165
GCA_022345925.1	GCA_022345925.1_00933	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JAKRDM010000024.1	831	1682
GCA_022345925.1	GCA_022345925.1_00942	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JAKRDM010000024.1	9563	10417
GCA_022345925.1	GCA_022345925.1_00949	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JAKRDM010000026.1	2825	4000
GCA_900638105.1	GCA_900638105.1_01430	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	140	123	100.00	44.12	136	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	LR134490.1	1406949	1407371
GCA_900638105.1	GCA_900638105.1_01734	hmrM	sodium-coupled multidrug efflux MATE transporter HmrM	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	464	464	100.00	99.78	464	AAC23256.1	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	LR134490.1	1683591	1684985
GCA_009017375.1	GCA_009017375.1_00582	blaOCH	OCH family extended-spectrum class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	BLASTP	390	390	100.00	99.49	390	WP_063860891.1	extended-spectrum class C beta-lactamase OCH-4	NF000264.2	OCH family extended-spectrum class C beta-lactamase	CP044970.1	575154	576326
GCA_009017375.1	GCA_009017375.1_01000	bepE	multidrug efflux RND transporter permease subunit BepE	plus	AMR	AMR	EFFLUX	EFFLUX	BLASTP	1049	1051	99.71	94.37	1048	AAN29241.1	multidrug efflux RND transporter permease subunit BepE	NA	NA	CP044970.1	1006622	1009771
GCA_009017375.1	GCA_009017375.1_01936	aph(3)-II	APH(3)-II family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	HMM	266	266	100.00	72.93	266	QQK39289.1	APH(3)-II family aminoglycoside O-phosphotransferase	NF032898.2	APH(3)-II family aminoglycoside O-phosphotransferase	CP044970.1	1989805	1990605
GCA_009017375.1	GCA_009017375.1_01952	cml	Cml family chloramphenicol efflux MFS transporter	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	397	397	100.00	92.95	397	WP_061345584.1	Cml family chloramphenicol efflux MFS transporter	NF033134.0	CmlA/FloR family chloramphenicol efflux MFS transporter	CP044970.1	2006218	2007411
GCA_009017375.1	GCA_009017375.1_02966	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	318	289	96.54	43.73	279	WP_063859390.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	CP044971.1	429550	430506
GCA_020388155.1	GCA_020388155.1_00073	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA	CP077857.1	42832	43596
GCA_020388155.1	GCA_020388155.1_00074	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA	CP077857.1	43877	44596
GCA_020388155.1	GCA_020388155.1_00075	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.39	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA	CP077857.1	44631	45359
GCA_020388155.1	GCA_020388155.1_00077	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA	CP077857.1	45889	46284
GCA_020388155.1	GCA_020388155.1_00078	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA	CP077857.1	46323	47078
GCA_020388155.1	GCA_020388155.1_00086	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP077857.1	53280	54215
GCA_020388155.1	GCA_020388155.1_00087	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP077857.1	54217	55200
GCA_020388155.1	GCA_020388155.1_00092	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA	CP077857.1	59331	60038
GCA_020388155.1	GCA_020388155.1_00093	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA	CP077857.1	60163	60885
GCA_020388155.1	GCA_020388155.1_00132	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP077857.1	92019	93311
GCA_020388155.1	GCA_020388155.1_01541	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP077857.1	1541714	1542325
GCA_020388155.1	GCA_020388155.1_01578	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP077857.1	1575633	1576988
GCA_020388155.1	GCA_020388155.1_01775	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP077857.1	1804335	1805693
GCA_020388155.1	GCA_020388155.1_01900	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP077857.1	1945290	1946342
GCA_020388155.1	GCA_020388155.1_01934	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP077857.1	1989672	1991201
GCA_020388155.1	GCA_020388155.1_02080	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1371	1115	61.43	99.85	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP077857.1	2147153	2151268
GCA_020388155.1	GCA_020388155.1_02157	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP077857.1	2229635	2230612
GCA_020388155.1	GCA_020388155.1_02158	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP077857.1	2230614	2231561
GCA_020388155.1	GCA_020388155.1_02159	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP077857.1	2232128	2233093
GCA_020388155.1	GCA_020388155.1_02243	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP077857.1	2321234	2321653
GCA_020388155.1	GCA_020388155.1_02417	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	98.96	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP077857.1	2472059	2473501
GCA_020388155.1	GCA_020388155.1_02566	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP077857.1	2626641	2626775
GCA_020388155.1	GCA_020388155.1_02635	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	257	257	100.00	98.05	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA	CP077857.1	2677840	2678613
GCA_020388155.1	GCA_020388155.1_02639	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA	CP077857.1	2680322	2680813
GCA_020388155.1	GCA_020388155.1_02644	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA	CP077857.1	2683028	2683378
GCA_003468065.1	GCA_003468065.1_00901	dfrF	trimethoprim-resistant dihydrofolate reductase DfrF	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	164	164	100.00	100.00	164	WP_002322211.1	trimethoprim-resistant dihydrofolate reductase DfrF	NF000333.1	trimethoprim-resistant dihydrofolate reductase DfrF	QSGF01000013.1	41634	42128
GCA_003468065.1	GCA_003468065.1_01308	tet(O)	tetracycline resistance ribosomal protection protein Tet(O)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	639	639	100.00	93.74	639	WP_012669445.1	tetracycline resistance ribosomal protection protein Tet(O)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	QSGF01000002.1	116059	117978
GCA_018499575.1	GCA_018499575.1_00558	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	142	142	90.85	60.47	129	WP_318245538.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	JAHDAP010000001.1	557828	558256
GCA_024401005.1	GCA_024401005.1_02773	aac(6)	aminoglycoside 6-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMINOGLYCOSIDE	HMM	144	144	100.00	63.19	144	WP_065217783.1	aminoglycoside 6-N-acetyltransferase	NF043067.1	aminoglycoside 6-N-acetyltransferase	CP038803.1	2842485	2842919
GCA_025151765.1	GCA_025151765.1_03130	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	466	547	84.83	44.23	468	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	JALXVR010000086.1	550	1950
GCA_018128165.1	GCA_018128165.1_00014	tet(37)	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	PARTIALP	398	108	68.52	93.24	74	WP_063855713.1	tetracycline resistance NADPH-dependent oxidoreductase Tet(37)	NA	NA	CP072371.1	22877	24073
GCA_008692995.1	GCA_008692995.1_01246	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	VXKF01000006.1	18190	19830
GCA_020097455.1	GCA_020097455.1_01508	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP083637.1	1600838	1602478
GCA_024204965.1	GCA_024204965.1_00055	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	CP093210.1	58138	60144
GCA_024204965.1	GCA_024204965.1_00056	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA	CP093210.1	60244	61230
GCA_024204965.1	GCA_024204965.1_00128	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	90.44	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP093210.1	140451	141740
GCA_024204965.1	GCA_024204965.1_00131	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD	CP093210.1	143918	144265
GCA_024204965.1	GCA_024204965.1_00205	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	142	142	100.00	99.30	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase	CP093210.1	233179	233607
GCA_024204965.1	GCA_024204965.1_01511	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI	CP093210.1	1577709	1578089
GCA_024204965.1	GCA_024204965.1_01512	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1	CP093210.1	1578079	1579836
GCA_024204965.1	GCA_024204965.1_01513	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	CP093210.1	1579943	1580788
GCA_024204965.1	GCA_024204965.1_02414	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC	CP093211.1	174	497
GCA_938046765.1	GCA_938046765.1_00447	msr(D)	ABC-F type ribosomal protection protein Msr(D)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B	EXACTP	487	487	100.00	100.00	487	WP_000420313.1	ABC-F type ribosomal protection protein Msr(D)	NF000168.2	Msr family ABC-F type ribosomal protection protein	CALIWQ010000008.1	5830	7293
GCA_938046765.1	GCA_938046765.1_00448	mef(A)	macrolide efflux MFS transporter Mef(A)	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN	EXACTP	405	405	100.00	100.00	405	WP_000417519.1	macrolide efflux MFS transporter Mef(A)	NF000245.1	macrolide efflux MFS transporter Mef(A)	CALIWQ010000008.1	7413	8630
GCA_001815755.1	GCA_001815755.1_00828	tet(W)	tetracycline resistance ribosomal protection protein Tet(W)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	640	639	100.00	97.97	639	WP_004217777.1	tetracycline resistance ribosomal protection protein Tet(W)	NF033148.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	KV821861.1	7717	9639
GCA_001815755.1	GCA_001815755.1_00831	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	98.24	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	KV821861.1	11655	12509
GCA_001815755.1	GCA_001815755.1_01827	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	546	631	87.48	70.47	552	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV821880.1	183194	184834
GCA_001027105.1	GCA_001027105.1_00086	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100300.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)	CP011526.1	102268	103626
GCA_001027105.1	GCA_001027105.1_00289	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	AAU95768.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA	CP011526.1	333082	334437
GCA_001027105.1	GCA_001027105.1_00327	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.55	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA	CP011526.1	367612	368223
GCA_001027105.1	GCA_001027105.1_01572	sel26	staphylococcal enterotoxin type 26	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	250	250	100.00	96.80	250	KAG18833.1	staphylococcal enterotoxin type 26	NA	NA	CP011526.1	1630682	1631434
GCA_001027105.1	GCA_001027105.1_01745	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.12	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP011526.1	1823571	1824863
GCA_001027105.1	GCA_001027105.1_01787	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	238	238	100.00	100.00	238	ABD30999.1	serine protease SplE	NA	NA	CP011526.1	1862105	1862821
GCA_001027105.1	GCA_001027105.1_01790	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	240	240	100.00	100.00	240	ABD31003.1	serine protease SplB	NA	NA	CP011526.1	1864596	1865318
GCA_001027105.1	GCA_001027105.1_01791	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	99.57	235	ABD31004.1	serine protease SplA	NA	NA	CP011526.1	1865443	1866150
GCA_001027105.1	GCA_001027105.1_01801	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.50	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA	CP011526.1	1877799	1878782
GCA_001027105.1	GCA_001027105.1_01802	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA	CP011526.1	1878784	1879704
GCA_001027105.1	GCA_001027105.1_01978	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA	CP011526.1	2026015	2026149
GCA_001027105.1	GCA_001027105.1_02127	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	EXACTP	480	480	100.00	100.00	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA	CP011526.1	2180664	2182106
GCA_001027105.1	GCA_001027105.1_02302	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	CP011526.1	2334041	2334460
GCA_001027105.1	GCA_001027105.1_02389	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA	CP011526.1	2423702	2424667
GCA_001027105.1	GCA_001027105.1_02390	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.14	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA	CP011526.1	2425235	2426182
GCA_001027105.1	GCA_001027105.1_02391	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA	CP011526.1	2426184	2427161
GCA_001027105.1	GCA_001027105.1_02467	sasG	LPXTG-anchored surface protein SasG	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	1371	1115	61.43	99.12	685	BAF79363.1	LPXTG-anchored surface protein SasG	NA	NA	CP011526.1	2504518	2508633
GCA_001027105.1	GCA_001027105.1_02611	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA	CP011526.1	2666413	2667942
GCA_001027105.1	GCA_001027105.1_02645	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA	CP011526.1	2711276	2712328
GCA_001027105.1	GCA_001027105.1_02712	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA	CP011527.1	17050	18483
GCA_001027105.1	GCA_001027105.1_02721	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA	CP011527.1	25445	25759
GCA_001027105.1	GCA_001027105.1_02722	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.53	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB	CP011527.1	25759	27048
GCA_001027105.1	GCA_001027105.1_02723	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA	CP011527.1	27066	27461
GCA_000834845.1	GCA_000834845.1_00253	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	121	102	100.00	52.46	122	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP009935.1	258858	259223
GCA_000834845.1	GCA_000834845.1_03165	ybtP	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.83	600	CAA21388.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	NA	NA	CP009935.1	3184331	3186133
GCA_000834845.1	GCA_000834845.1_03166	ybtQ	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	600	600	100.00	99.83	600	AAC69584.1	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	NA	NA	CP009935.1	3186120	3187922
GCA_000834845.1	GCA_000834845.1_03302	asr	acid resistance repetitive basic protein Asr	plus	STRESS	ACID	NA	NA	HMM	92	102	97.06	50.96	104	BAA15331.2	acid resistance repetitive basic protein Asr	NF033636.1	acid resistance repetitive basic protein Asr	CP009935.1	3316380	3316658
GCA_000834845.1	GCA_000834845.1_03745	yfeA	iron/manganese ABC transporter substrate-binding protein YfeA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	322	322	100.00	100.00	322	AAC46147.1	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	CP009935.1	3747427	3748395
GCA_000834845.1	GCA_000834845.1_03746	yfeB	iron/manganese ABC transporter ATP-binding protein YfeB	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	296	296	100.00	100.00	296	AAC46148.1	iron/manganese ABC transporter ATP-binding protein YfeB	NA	NA	CP009935.1	3748392	3749282
GCA_000834845.1	GCA_000834845.1_03748	yfeD	iron/manganese ABC transporter permease subunit YfeD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	297	100.00	99.66	297	AAC46150.1	iron/manganese ABC transporter permease subunit YfeD	NA	NA	CP009935.1	3750163	3751056
GCA_000834845.1	GCA_000834845.1_04181	ymoA	expression modulating protein YmoA	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	67	67	100.00	100.00	67	AAQ90017.1	expression modulating protein YmoA	NA	NA	CP009935.1	4200039	4200242
GCA_000834845.1	GCA_000834845.1_04491	yopO	type III secretion system effector protein kinase YopO/YpkA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	729	729	100.00	97.26	729	CFQ25321.1	type III secretion system effector protein kinase YopO/YpkA	NA	NA	CP009937.1	12463	14652
GCA_000834845.1	GCA_000834845.1_04492	yopJ	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	288	288	100.00	99.65	288	AKN09807.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	NF040632.1	YopJ/YopP family T3SS effector serine/threonine acetyltransferase	CP009937.1	15048	15914
GCA_000834845.1	GCA_000834845.1_04494	yopH	T3SS effector protein-tyrosine-phosphatase YopH	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	468	468	100.00	98.50	468	AJJ21453.1	T3SS effector protein-tyrosine-phosphatase YopH	NA	NA	CP009937.1	17597	19003
GCA_000834845.1	GCA_000834845.1_04509	virF	virulence regulon transcriptional activator VirF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	271	271	100.00	97.79	271	AAD16833.1	virulence regulon transcriptional activator VirF	NA	NA	CP009937.1	29198	30013
GCA_000834845.1	GCA_000834845.1_04528	lcrV	type III secretion system needle tip protein LcrV	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	326	329	99.70	95.12	328	CNC59088.1	type III secretion system needle tip protein LcrV	NA	NA	CP009937.1	43209	44189
GCA_000834845.1	GCA_000834845.1_04530	yopB	type III secretion system translocon subunit YopB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	401	401	100.00	96.26	401	AAK69211.1	type III secretion system translocon subunit YopB	NA	NA	CP009937.1	44686	45891
GCA_000834845.1	GCA_000834845.1_04531	yopD	type III secretion system translocon subunit YopD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	306	100.00	97.71	306	AAK69210.1	type III secretion system translocon subunit YopD	NA	NA	CP009937.1	45910	46830
GCA_000834845.1	GCA_000834845.1_04533	yopM	type III secretion system effector YopM	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	367	367	100.00	89.65	367	AJJ21446.1	type III secretion system effector YopM	NA	NA	CP009937.1	48559	49662
GCA_000834845.1	GCA_000834845.1_04538	yopT	T3SS effector cysteine protease YopT	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	322	322	100.00	92.55	322	AJJ21466.1	T3SS effector cysteine protease YopT	NA	NA	CP009937.1	52420	53388
GCA_000834845.1	GCA_000834845.1_04551	yopE	type III secretion system effector GTPase activator YopE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	219	219	100.00	94.06	219	AJJ21471.1	type III secretion system effector GTPase activator YopE	NA	NA	CP009937.1	61739	62398
GCA_009789555.1	GCA_009789555.1_00606	ampC	class C beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	387	396	94.44	56.15	374	WP_280147732.1	class C beta-lactamase	NF033085.1	class C beta-lactamase	CP046902.1	666794	667957
GCA_009789555.1	GCA_009789555.1_01449	mreA	metal-sensing transcriptional repressor MreA	plus	STRESS	METAL	NA	NA	BLASTP	95	95	100.00	96.84	95	AAN68577.1	metal-sensing transcriptional repressor MreA	NA	NA	CP046902.1	1533731	1534018
GCA_009789555.1	GCA_009789555.1_02053	aac(3)-I	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	HMM	158	156	98.72	60.76	158	WP_034006142.1	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	NF033083.0	AAC(3)-I family aminoglycoside 3-N-acetyltransferase	CP046902.1	2168818	2169294
GCA_009789555.1	GCA_009789555.1_04564	merE	broad-spectrum mercury transporter MerE	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	78	78	100.00	100.00	78	AAC38236.1	broad-spectrum mercury transporter MerE	NF010310.2	broad-spectrum mercury transporter MerE	CP046903.1	104684	104920
GCA_009789555.1	GCA_009789555.1_04565	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	121	121	100.00	98.35	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD	CP046903.1	104917	105282
GCA_009789555.1	GCA_009789555.1_04566	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	548	561	100.00	85.38	561	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	CP046903.1	105299	106945
GCA_009789555.1	GCA_009789555.1_04567	merF	mercury resistance system transport protein MerF	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	81	81	100.00	100.00	81	ABA25986.1	mercury resistance system transport protein MerF	NF033565.0	mercury resistance system transport protein MerF	CP046903.1	106942	107187
GCA_009789555.1	GCA_009789555.1_04568	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	98.90	93.33	90	AAA98223.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP	CP046903.1	107190	107465
GCA_009789555.1	GCA_009789555.1_04569	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	116	116	100.00	93.97	116	AAA98222.1	mercuric transport protein MerT	NA	NA	CP046903.1	107481	107831
GCA_009789555.1	GCA_009789555.1_04570	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	144	144	100.00	94.44	144	AAC38229.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR	CP046903.1	107903	108337
GCA_001814945.1	GCA_001814945.1_01699	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	474	631	73.53	43.76	473	AAA83977.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase	KV818463.1	58172	59596
GCA_030228935.1	GCA_030228935.1_00383	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	99.65	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	JASPHT010000018.1	248	1102
GCA_030228935.1	GCA_030228935.1_00392	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	283	283	100.00	100.00	283	WP_000946487.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1	JASPHT010000018.1	8984	9835
GCA_030228935.1	GCA_030228935.1_00875	cmx	chloramphenicol efflux MFS transporter Cmx	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	391	391	100.00	100.00	391	WP_005297378.1	chloramphenicol efflux MFS transporter Cmx	NF000510.1	chloramphenicol efflux MFS transporter Cmx	JASPHT010000020.1	2781	3956
GCA_006439055.1	GCA_006439055.1_00577	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	301	307	91.53	47.62	294	WP_007683232.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	RCZC01000001.1	644061	644966
GCA_006439055.1	GCA_006439055.1_02232	bla	subclass B3 metallo-beta-lactamase	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	283	289	95.85	44.04	277	WP_063859390.1	subclass B3 metallo-beta-lactamase	NF033105.1	subclass B3 metallo-beta-lactamase	RCZC01000002.1	1058423	1059274
GCA_006439055.1	GCA_006439055.1_03962	aph(3)-I	APH(3)-I family aminoglycoside O-phosphotransferase	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN/KANAMYCIN	HMM	267	270	98.52	67.29	266	WP_216562158.1	APH(3)-I family aminoglycoside O-phosphotransferase	NF033059.2	APH(3)-I family aminoglycoside O-phosphotransferase	RCZC01000006.1	32794	33597
GCA_030515675.1	GCA_030515675.1_02043	erm(X)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	AZITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/LINCOMYCIN/STREPTOGRAMIN B/TYLOSIN	BLASTP	284	284	100.00	96.13	284	WP_011117480.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X)	NF000499.2	23S ribosomal RNA methyltransferase Erm	CP100363.1	2192915	2193769