Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_000011505.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein
GCA_000011505.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia
GCA_000011505.1_00041	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA
GCA_000011505.1_00042	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1
GCA_000011505.1_00043	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	BLASTP	114	123	92.68	100.00	114	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI
GCA_000011505.1_00052	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)
GCA_000011505.1_00053	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase
GCA_000011505.1_00139	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)
GCA_000011505.1_00330	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA
GCA_000011505.1_00703	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA
GCA_000011505.1_00704	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.30	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_000011505.1_00705	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA
GCA_000011505.1_00729	mco	multi-copper oxidase Mco	plus	STRESS	METAL	COPPER	COPPER	BLASTP	477	462	100.00	99.35	462	AAQ17236.1	multi-copper oxidase Mco	NA	NA
GCA_000011505.1_01760	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)
GCA_000011505.1_01761	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase
GCA_000011505.1_01860	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI
GCA_000011505.1_01861	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.49	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1
GCA_000011505.1_01862	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ
GCA_000011505.1_01887	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_000011505.1_01934	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.06	238	ABD30999.1	serine protease SplE	NA	NA
GCA_000011505.1_01947	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA
GCA_000011505.1_01948	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA
GCA_000011505.1_01949	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA
GCA_000011505.1_01950	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.65	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA
GCA_000011505.1_02106	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA
GCA_000011505.1_02111	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA
GCA_000011505.1_02115	sea	staphylococcal enterotoxin type A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	257	257	100.00	98.05	257	BAV60816.1	staphylococcal enterotoxin type A	NA	NA
GCA_000011505.1_02188	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA
GCA_000011505.1_02515	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase
GCA_000011505.1_02610	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.35	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA
GCA_000011505.1_02611	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA
GCA_000011505.1_02612	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA
GCA_000011505.1_02824	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA
GCA_000011505.1_02859	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA
GCA_000011505.1_02882	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.97	1183	BAB96477.1	collagen adhesin Cna	NA	NA