Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_000011925.1_00216	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	99.77	79.91	428	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_000011925.1_01208	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)
GCA_000011925.1_01209	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase
GCA_000011925.1_01332	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)
GCA_000011925.1_01333	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase
GCA_000011925.1_01488	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	96.03	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI
GCA_000011925.1_01489	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1
GCA_000011925.1_01490	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	95.02	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ
GCA_000011925.1_01607	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA
GCA_000011925.1_01611	aac(6')-Ie/aph(2'')-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2'')-Ia
GCA_000011925.1_02312	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	355	350	100.00	74.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA
GCA_000011925.1_02364	fosB	FosB family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	142	142	100.00	100.00	142	WP_002467687.1	FosB family fosfomycin resistance bacillithiol transferase	NF000063.1	FosB family fosfomycin resistance bacillithiol transferase
GCA_000011925.1_02438	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	115	121	100.00	46.28	121	KAA9473342.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD
GCA_000011925.1_02441	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	432	429	100.00	90.68	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_000011925.1_02518	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase
GCA_000011925.1_02519	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)
GCA_000011925.1_02528	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI
GCA_000011925.1_02529	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1
GCA_000011925.1_02530	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA
GCA_000011925.1_02565	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	281	281	100.00	100.00	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ
GCA_000011925.1_02566	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1
GCA_000011925.1_02567	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI
GCA_000011925.1_02572	aph(3')-IIIa	aminoglycoside O-phosphotransferase APH(3')-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3')-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3')-IIIa
GCA_000011925.1_02573	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	180	180	100.00	100.00	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4
GCA_000011925.1_02574	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	302	302	100.00	100.00	302	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NF033084.2	aminoglycoside 6-nucleotidyltransferase