Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_000160335.2_00085	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100289.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)
GCA_000160335.2_00167	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ
GCA_000160335.2_00168	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1
GCA_000160335.2_00169	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI
GCA_000160335.2_00288	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA
GCA_000160335.2_01369	lukF-PV	Panton-Valentine bi-component leukocidin subunit F	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	328	325	98.77	98.75	321	BAA24008.1	Panton-Valentine bi-component leukocidin subunit F	NA	NA
GCA_000160335.2_01370	lukS-PV	Panton-Valentine bi-component leukocidin subunit S	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	312	312	100.00	100.00	312	AGW33874.1	Panton-Valentine bi-component leukocidin subunit S	NA	NA
GCA_000160335.2_01725	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.95	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_000160335.2_01772	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.06	238	ABD30999.1	serine protease SplE	NA	NA
GCA_000160335.2_01783	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA
GCA_000160335.2_01784	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA
GCA_000160335.2_01785	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA
GCA_000160335.2_01786	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.23	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA
GCA_000160335.2_01939	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	116	116	100.00	100.00	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA
GCA_000160335.2_01944	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA
GCA_000160335.2_02023	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA
GCA_000160335.2_02176	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	96.67	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA
GCA_000160335.2_02345	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase
GCA_000160335.2_02437	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA
GCA_000160335.2_02438	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA
GCA_000160335.2_02439	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA
GCA_000160335.2_02653	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA
GCA_000160335.2_02688	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	303	350	81.71	98.95	286	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA
GCA_000160335.2_02711	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.97	1183	BAB96477.1	collagen adhesin Cna	NA	NA
GCA_000160335.2_02744	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	EXACTP	216	216	100.00	100.00	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB
GCA_000160335.2_02745	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	365	547	66.73	99.73	365	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase
GCA_000160335.2_02747	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	128	128	100.00	100.00	128	ADA79992.1	mercuric transport protein MerT	NA	NA
GCA_000160335.2_02754	cadC	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM/LEAD/ZINC	CADMIUM/LEAD/ZINC	EXACTP	122	122	100.00	100.00	122	AAB59153.1	Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA
GCA_000160335.2_02757	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	EXACTP	131	131	100.00	100.00	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA
GCA_000160335.2_02758	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	429	429	100.00	100.00	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_000160335.2_02759	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	EXACTP	104	104	100.00	100.00	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA