Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_000253135.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein
GCA_000253135.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia
GCA_000253135.1_00094	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100299.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)
GCA_000253135.1_00125	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase
GCA_000253135.1_00126	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)
GCA_000253135.1_00297	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	EXACTP	451	451	100.00	100.00	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA
GCA_000253135.1_00334	selX	staphylococcal enterotoxin-like toxin X	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	203	203	100.00	96.06	203	AEI60187.1	staphylococcal enterotoxin-like toxin X	NA	NA
GCA_000253135.1_01669	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_000253135.1_01707	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	98.75	240	ABD31003.1	serine protease SplB	NA	NA
GCA_000253135.1_01708	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.02	235	ABD31004.1	serine protease SplA	NA	NA
GCA_000253135.1_01713	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA
GCA_000253135.1_01714	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	306	311	98.39	100.00	306	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA
GCA_000253135.1_01722	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	100.00	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA
GCA_000253135.1_01723	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	131	261	50.19	94.66	131	SGR88168.1	staphylococcal enterotoxin type U	NA	NA
GCA_000253135.1_01725	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA
GCA_000253135.1_01726	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA
GCA_000253135.1_01727	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	100.00	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA
GCA_000253135.1_01881	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA
GCA_000253135.1_01886	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA
GCA_000253135.1_01890	sep	staphylococcal enterotoxin type P	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	260	260	100.00	100.00	260	ADC38120.1	staphylococcal enterotoxin type P	NA	NA
GCA_000253135.1_01960	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA
GCA_000253135.1_02105	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA
GCA_000253135.1_02278	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	139	139	100.00	100.00	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase
GCA_000253135.1_02362	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA
GCA_000253135.1_02363	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA
GCA_000253135.1_02364	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA
GCA_000253135.1_02589	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.21	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA
GCA_000253135.1_02623	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA
GCA_000253135.1_02668	qacC	quaternary ammonium compound efflux SMR transporter QacC	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	107	107	100.00	100.00	107	WP_001146389.1	quaternary ammonium compound efflux SMR transporter QacC	NF000023.1	quaternary ammonium compound efflux SMR transporter QacC
GCA_000253135.1_02672	cadD	cadmium resistance transporter CadD	plus	STRESS	METAL	CADMIUM	CADMIUM	BLASTP	209	205	100.00	100.00	205	BAB43874.1	cadmium resistance transporter CadD	NA	NA
GCA_000253135.1_02683	sed	staphylococcal enterotoxin type D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	258	258	100.00	99.61	258	AAB06195.1	staphylococcal enterotoxin type D	NA	NA
GCA_000253135.1_02686	sej	staphylococcal enterotoxin type J	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	268	268	100.00	100.00	268	AAC78590.1	staphylococcal enterotoxin type J	NA	NA
GCA_000253135.1_02687	ser	staphylococcal enterotoxin type R	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	259	259	100.00	99.61	259	EVY93839.1	staphylococcal enterotoxin type R	NA	NA
GCA_000253135.1_02693	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI
GCA_000253135.1_02694	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	98.80	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1
GCA_000253135.1_02695	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	98.58	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ