Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_001188045.2_00018	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENIC	BLASTP	104	104	100.00	99.04	104	AAA25636.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA
GCA_001188045.2_00019	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	99.77	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_001188045.2_00020	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	131	131	100.00	98.47	131	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA
GCA_001188045.2_00457	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	133	133	100.00	100.00	133	WP_003726635.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase
GCA_001188045.2_00543	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	96.62	296	AHJ03495.1	class 3 internalin InlC	NA	NA
GCA_001188045.2_01214	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	388	388	100.00	94.59	388	AEO26812.1	class 3 internalin InlP	NA	NA
GCA_001188045.2_01302	ami	autolysin Ami	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	917	917	100.00	99.13	917	ASH48222.1	autolysin Ami	NA	NA
GCA_001188045.2_01958	vip	cell invasion LPXTG protein Vip	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	403	399	100.00	86.60	403	AEO24620.1	cell invasion LPXTG protein Vip	NF033201.1	cell invasion LPXTG protein Vip
GCA_001188045.2_01969	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1781	1778	100.00	93.71	1781	AEO24631.1	class 1 internalin InlI	NA	NA
GCA_001188045.2_02084	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	36.71	858	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA
GCA_001188045.2_02085	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	95.56	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA
GCA_001188045.2_02088	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	92.68	205	AEO24735.1	nuclear targeted protein LntA	NA	NA
GCA_001188045.2_02155	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	609	605	100.00	94.30	614	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA
GCA_001188045.2_02594	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	97.90	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein
GCA_001188045.2_02751	aut	peptidoglycan hydrolase Auto	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	572	572	100.00	98.78	572	ADB67911.1	peptidoglycan hydrolase Auto	NA	NA
GCA_001188045.2_02971	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	606	598	100.00	90.76	606	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK