Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_001454905.1_00096	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	383	388	98.71	95.30	383	AEO26812.1	class 3 internalin InlP	NA	NA
GCA_001454905.1_00867	vip	cell invasion LPXTG protein Vip	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	418	399	100.00	83.25	418	AEO24620.1	cell invasion LPXTG protein Vip	NF033201.1	cell invasion LPXTG protein Vip
GCA_001454905.1_00879	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1775	1778	100.00	93.59	1778	AEO24631.1	class 1 internalin InlI	NA	NA
GCA_001454905.1_01006	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	36.55	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA
GCA_001454905.1_01007	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	93.65	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA
GCA_001454905.1_01010	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	92.68	205	AEO24735.1	nuclear targeted protein LntA	NA	NA
GCA_001454905.1_01079	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	609	605	100.00	94.14	614	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA
GCA_001454905.1_01493	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	97.90	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein
GCA_001454905.1_01857	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	606	598	100.00	90.76	606	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK
GCA_001454905.1_02312	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	133	133	100.00	100.00	133	WP_003726635.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase
GCA_001454905.1_02401	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	96.62	296	AHJ03495.1	class 3 internalin InlC	NA	NA
GCA_001454905.1_02877	arsD2	arsenite efflux transporter metallochaperone ArsD-related protein	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	103	103	100.00	100.00	103	EGJ25779.1	arsenite efflux transporter metallochaperone ArsD-related protein	NF033727.2	arsenite efflux transporter metallochaperone ArsD
GCA_001454905.1_02878	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	579	579	100.00	100.00	579	EGJ25780.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA
GCA_001454905.1_02879	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	97	97	100.00	100.00	97	EGO5141043.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA
GCA_001454905.1_02880	arsD	arsenite efflux transporter metallochaperone ArsD	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	123	123	100.00	100.00	123	EGJ25782.1	arsenite efflux transporter metallochaperone ArsD	NF033727.2	arsenite efflux transporter metallochaperone ArsD
GCA_001454905.1_02881	arsR	As(III)-sensing metalloregulatory transcriptional repressor ArsR	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	121	121	100.00	100.00	121	EGJ25783.1	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	NA
GCA_001454905.1_02882	arsA	arsenite efflux transporter ATPase subunit ArsA	plus	STRESS	METAL	ARSENIC	ARSENITE	EXACTP	580	580	100.00	100.00	580	EGJ25784.1	arsenite efflux transporter ATPase subunit ArsA	NA	NA
GCA_001454905.1_02883	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	357	359	99.44	100.00	357	EGJ25785.1	arsenite efflux transporter membrane subunit ArsB	NA	NA
GCA_001454905.1_02884	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	348	351	99.15	99.71	348	EGJ25786.1	arsenite efflux transporter membrane subunit ArsB	NA	NA
GCA_001454905.1_02889	cadC	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	118	118	100.00	100.00	118	EGJ25791.1	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	NA	NA
GCA_001454905.1_02890	cadA	cadmium-translocating P-type ATPase CadA	plus	STRESS	METAL	CADMIUM	CADMIUM	EXACTP	700	700	100.00	100.00	700	EGJ25792.1	cadmium-translocating P-type ATPase CadA	NA	NA