Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_001471515.2_00560	dfrG	trimethoprim-resistant dihydrofolate reductase DfrG	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	165	165	100.00	100.00	165	WP_000868795.1	trimethoprim-resistant dihydrofolate reductase DfrG	NF000143.1	trimethoprim-resistant dihydrofolate reductase DfrG
GCA_001471515.2_01427	aac(6')-Ie/aph(2'')-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	479	479	100.00	99.79	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2'')-Ia
GCA_001471515.2_01431	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)
GCA_001471515.2_01432	mph(C)	Mph(C) family macrolide 2'-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2'-phosphotransferase	NF000240.1	Mph(C) family macrolide 2'-phosphotransferase
GCA_001471515.2_01697	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI
GCA_001471515.2_01698	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.83	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1
GCA_001471515.2_01699	blaPC1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	281	281	100.00	100.00	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ
GCA_001471515.2_01701	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter
GCA_001471515.2_01706	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4
GCA_001471515.2_01707	aph(3')-IIIa	aminoglycoside O-phosphotransferase APH(3')-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3')-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3')-IIIa
GCA_001471515.2_01840	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA
GCA_001471515.2_01855	tet(K)	tetracycline efflux MFS transporter Tet(K)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	459	459	100.00	100.00	459	WP_000492283.1	tetracycline efflux MFS transporter Tet(K)	NF012183.0	tetracycline efflux MFS transporter Tet(K)
GCA_001471515.2_01889	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	91.47	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA
GCA_001471515.2_01890	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	93.71	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_001471515.2_01896	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	130	131	97.71	92.97	128	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA
GCA_001471515.2_01897	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.64	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_001471515.2_01981	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_001471515.2_02763	mupA	mupirocin-resistant isoleucine--tRNA ligase MupA	core	AMR	AMR	MUPIROCIN	MUPIROCIN	BLASTP	1024	1024	100.00	99.80	1024	WP_000163435.1	mupirocin-resistant isoleucine--tRNA ligase MupA	NF000257.1	mupirocin-resistant isoleucine--tRNA ligase MupA
GCA_001471515.2_02778	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	99.46	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA
GCA_001471515.2_02779	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter