Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_001483405.1_00239	inlK	class 1 internalin InlK	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	598	598	100.00	99.16	598	AEO25637.1	class 1 internalin InlK	NF033186.1	class 1 internalin InlK
GCA_001483405.1_00446	aut	peptidoglycan hydrolase Auto	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	572	572	100.00	100.00	572	ADB67911.1	peptidoglycan hydrolase Auto	NA	NA
GCA_001483405.1_00607	vga(G)	ABC-F type ribosomal protection protein Vga(G)	core	AMR	AMR	LINCOSAMIDE	LINCOSAMIDE	BLASTP	523	523	100.00	98.47	523	WP_010989615.1	ABC-F type ribosomal protection protein Vga(G)	NF000170.2	Vga family ABC-F type ribosomal protection protein
GCA_001483405.1_00927	inl-lmo0610	lmo0610 family class 1 internalin Inl-lmo0610	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	589	589	100.00	99.32	589	AEO24908.1	lmo0610 family class 1 internalin Inl-lmo0610	NA	NA
GCA_001483405.1_01044	inl-lmo0514	lmo0514 family class 1 internalin Inl-lmo0514	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	611	605	100.00	98.53	611	AEO24812.1	lmo0514 family class 1 internalin Inl-lmo0514	NA	NA
GCA_001483405.1_01106	gadD1	glutamate decarboxylase GadD1	plus	STRESS	ACID	NA	NA	BLASTP	462	462	100.00	99.78	462	CAC98526.1	glutamate decarboxylase GadD1	NA	NA
GCA_001483405.1_01115	lntA	nuclear targeted protein LntA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	205	211	97.16	99.51	205	AEO24735.1	nuclear targeted protein LntA	NA	NA
GCA_001483405.1_01118	inlB	GW domain-containing class 2 internalin InlB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	630	630	100.00	99.68	630	AEO24731.1	GW domain-containing class 2 internalin InlB	NA	NA
GCA_001483405.1_01119	inlA	class 1 internalin InlA	plus	VIRULENCE	VIRULENCE	NA	NA	HMM	800	821	97.81	37.02	859	AEO24707.1	class 1 internalin InlA	NF033189.1	class 1 internalin InlA
GCA_001483405.1_01143	inlF	class 1 internalin InlF	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	821	821	100.00	99.63	821	AEO24707.1	class 1 internalin InlF	NA	NA
GCA_001483405.1_01222	inlI	class 1 internalin InlI	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1783	1778	100.00	99.49	1778	AEO24631.1	class 1 internalin InlI	NA	NA
GCA_001483405.1_01235	vip	cell invasion LPXTG protein Vip	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	399	399	100.00	99.50	399	AEO24620.1	cell invasion LPXTG protein Vip	NF033201.1	cell invasion LPXTG protein Vip
GCA_001483405.1_01286	inlE	class 1 internalin InlE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	499	499	100.00	99.60	499	CAA07458.1	class 1 internalin InlE	NA	NA
GCA_001483405.1_01287	inlD	class 1 internalin InlD	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	567	567	100.00	99.82	567	AAB67970.1	class 1 internalin InlD	NA	NA
GCA_001483405.1_01289	inlG	class 1 internalin InlG	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	490	490	100.00	99.80	490	AEO05269.1	class 1 internalin InlG	NA	NA
GCA_001483405.1_01921	ami	autolysin Ami	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	917	917	100.00	99.56	917	ASH48222.1	autolysin Ami	NA	NA
GCA_001483405.1_02010	inlP	class 3 internalin InlP	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	383	388	98.71	99.22	383	AEO26812.1	class 3 internalin InlP	NA	NA
GCA_001483405.1_02491	inlL	class 1 internalin InlL	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	626	626	100.00	98.40	626	CDG45949.1	class 1 internalin InlL	NA	NA
GCA_001483405.1_02745	inlC	class 3 internalin InlC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	297	296	100.00	100.00	296	AHJ03495.1	class 3 internalin InlC	NA	NA
GCA_001483405.1_02833	fosX	fosfomycin resistance hydrolase FosX	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	EXACTP	133	133	100.00	100.00	133	WP_010989789.1	fosfomycin resistance hydrolase FosX	NF000222.1	FosX/FosE/FosI family fosfomycin resistance hydrolase