Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_003193745.1_00045	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA
GCA_003193745.1_00085	merT	mercuric transport protein MerT	plus	STRESS	METAL	MERCURY	MERCURY	PARTIALP	112	128	87.50	100.00	112	ADA79992.1	mercuric transport protein MerT	NA	NA
GCA_003193745.1_00086	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	EXACTP	547	547	100.00	100.00	547	AAA98245.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase
GCA_003193745.1_00087	merB	organomercurial lyase MerB	plus	STRESS	METAL	MERCURY	ORGANOMERCURY	BLASTP	216	216	100.00	98.61	216	BAB47641.1	organomercurial lyase MerB	NF033555.1	organomercurial lyase MerB
GCA_003193745.1_00154	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	452	450	100.00	100.00	450	WP_001100293.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)
GCA_003193745.1_00357	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	98.89	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA
GCA_003193745.1_00858	sec3	staphylococcal enterotoxin type C3	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	266	266	100.00	100.00	266	BAB43097.1	staphylococcal enterotoxin type C3	NA	NA
GCA_003193745.1_00859	sel	staphylococcal enterotoxin type L	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.17	240	AMG40538.1	staphylococcal enterotoxin type L	NA	NA
GCA_003193745.1_01601	tet(L)	tetracycline efflux MFS transporter Tet(L)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	458	458	100.00	100.00	458	WP_001574277.1	tetracycline efflux MFS transporter Tet(L)	NF012185.0	tetracycline efflux MFS transporter Tet(L)
GCA_003193745.1_01602	tet(M)	tetracycline resistance ribosomal protection protein Tet(M)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	639	639	100.00	100.00	639	WP_001574275.1	tetracycline resistance ribosomal protection protein Tet(M)	NF012155.1	tetracycline resistance ribosomal protection protein Tet(M)
GCA_003193745.1_01817	erm(A)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE	AZITHROMYCIN/CLARITHROMYCIN/CLINDAMYCIN/ERYTHROMYCIN/TELITHROMYCIN	EXACTP	243	243	100.00	100.00	243	WP_001072201.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NF012222.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)
GCA_003193745.1_01818	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase
GCA_003193745.1_01937	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	79.49	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_003193745.1_01983	splE	serine protease SplE	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	238	238	100.00	97.06	238	ABD30999.1	serine protease SplE	NA	NA
GCA_003193745.1_01994	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	95.22	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA
GCA_003193745.1_01995	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	261	261	100.00	96.17	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA
GCA_003193745.1_01996	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	92.98	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA
GCA_003193745.1_01997	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	96.65	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA
GCA_003193745.1_02137	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	94.44	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI
GCA_003193745.1_02138	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.55	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1
GCA_003193745.1_02139	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ
GCA_003193745.1_02161	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	116	116	100.00	99.14	116	ADL23798.1	complement inhibitor SCIN-A	NA	NA
GCA_003193745.1_02166	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	99.39	163	CAA24957.1	staphylokinase	NA	NA
GCA_003193745.1_02170	sep	staphylococcal enterotoxin type P	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	260	260	100.00	100.00	260	ADC38120.1	staphylococcal enterotoxin type P	NA	NA
GCA_003193745.1_02244	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA
GCA_003193745.1_02396	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	96.67	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA
GCA_003193745.1_02567	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase
GCA_003193745.1_02661	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	99.68	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA
GCA_003193745.1_02662	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	99.37	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA
GCA_003193745.1_02663	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	325	325	100.00	100.00	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA
GCA_003193745.1_02878	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	93.91	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA
GCA_003193745.1_02912	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	350	350	100.00	99.14	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA
GCA_003193745.1_02935	cna	collagen adhesin Cna	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	1183	1183	100.00	97.89	1183	BAB96477.1	collagen adhesin Cna	NA	NA