Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_003342735.1_00035	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein
GCA_003342735.1_00036	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia
GCA_003342735.1_00039	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA
GCA_003342735.1_00040	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	PARTIALP	328	585	55.56	100.00	325	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NA	NA
GCA_003342735.1_00087	tet(38)	tetracycline efflux MFS transporter Tet(38)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	EXACTP	450	450	100.00	100.00	450	WP_001100294.1	tetracycline efflux MFS transporter Tet(38)	NF012176.0	tetracycline efflux MFS transporter Tet(38)
GCA_003342735.1_00296	mepA	multidrug efflux MATE transporter MepA	plus	AMR	AMR	TETRACYCLINE	TIGECYCLINE	BLASTP	451	451	100.00	99.11	451	BAB41547.1	multidrug efflux MATE transporter MepA	NF000131.1	multidrug efflux MATE transporter MepA
GCA_003342735.1_01749	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	430	429	100.00	81.35	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_003342735.1_01787	splB	serine protease SplB	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	240	240	100.00	99.58	240	ABD31003.1	serine protease SplB	NA	NA
GCA_003342735.1_01788	splA	serine protease SplA	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	235	235	100.00	97.87	235	ABD31004.1	serine protease SplA	NA	NA
GCA_003342735.1_01793	lukD	bi-component leukocidin LukED subunit D	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	327	327	100.00	94.19	327	CAA73668.1	bi-component leukocidin LukED subunit D	NA	NA
GCA_003342735.1_01794	lukE	bi-component leukocidin LukED subunit E	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	311	311	100.00	99.68	311	RCV70079.1	bi-component leukocidin LukED subunit E	NA	NA
GCA_003342735.1_01802	sen	staphylococcal enterotoxin type N	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	251	272	92.28	99.60	251	SAO78304.1	staphylococcal enterotoxin type N	NA	NA
GCA_003342735.1_01803	seu	staphylococcal enterotoxin type U	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	256	261	100.00	94.25	261	SGR88168.1	staphylococcal enterotoxin type U	NA	NA
GCA_003342735.1_01804	sei	staphylococcal enterotoxin type I	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	242	243	99.59	93.80	242	SGR88193.1	staphylococcal enterotoxin type I	NA	NA
GCA_003342735.1_01805	sem	staphylococcal enterotoxin type M	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	239	239	100.00	94.14	239	SGR88215.1	staphylococcal enterotoxin type M	NA	NA
GCA_003342735.1_01806	seo	staphylococcal enterotoxin type O	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	254	260	97.69	99.61	254	BAB42916.1	staphylococcal enterotoxin type O	NA	NA
GCA_003342735.1_01942	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	HMM	585	585	100.00	88.72	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1
GCA_003342735.1_01943	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	94.66	281	WP_000733281.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ
GCA_003342735.1_01969	scn	complement inhibitor SCIN-A	plus	VIRULENCE	VIRULENCE	NA	NA	PARTIALP	82	116	70.69	98.78	82	ADL23798.1	complement inhibitor SCIN-A	NA	NA
GCA_003342735.1_01975	sak	staphylokinase	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	163	163	100.00	98.77	163	CAA24957.1	staphylokinase	NA	NA
GCA_003342735.1_02048	hld	delta-hemolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	44	26	100.00	100.00	26	AGU62139.1	delta-hemolysin	NA	NA
GCA_003342735.1_02195	lmrS	multidrug efflux MFS transporter LmrS	plus	STRESS	BIOCIDE	MACROLIDE/PHENICOL	CHLORAMPHENICOL/ERYTHROMYCIN	BLASTP	480	480	100.00	99.17	480	AAW38464.1	multidrug efflux MFS transporter LmrS	NA	NA
GCA_003342735.1_02366	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	BLASTP	139	139	100.00	99.28	139	WP_000920239.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase
GCA_003342735.1_02449	hlgA	bi-component gamma-hemolysin HlgAB subunit A	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	321	309	100.00	100.00	309	AUU54669.1	bi-component gamma-hemolysin HlgAB subunit A	NA	NA
GCA_003342735.1_02450	hlgC	bi-component gamma-hemolysin HlgCB subunit C	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	315	315	100.00	97.46	315	CAA57277.1	bi-component gamma-hemolysin HlgCB subunit C	NA	NA
GCA_003342735.1_02451	hlgB	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	325	325	100.00	97.54	325	CAA57278.1	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	NA
GCA_003342735.1_02676	aur	zinc metalloproteinase aureolysin	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	509	509	100.00	99.41	509	EHO93748.1	zinc metalloproteinase aureolysin	NA	NA
GCA_003342735.1_02713	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	EXACTP	350	350	100.00	100.00	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA