Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_012926855.1_00557	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	429	429	100.00	77.62	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_012926855.1_00844	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	126	126	100.00	99.21	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI
GCA_012926855.1_00845	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	585	585	100.00	100.00	585	WP_001096386.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1
GCA_012926855.1_00846	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.29	281	WP_000733274.1	penicillin-hydrolyzing class A beta-lactamase BlaZ	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ
GCA_012926855.1_00897	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721310.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA
GCA_012926855.1_00898	mecR1	beta-lactam sensor/signal transducer MecR1	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	585	585	100.00	100.00	585	WP_000952923.1	beta-lactam sensor/signal transducer MecR1	NF033109.1	beta-lactam sensor/signal transducer MecR1
GCA_012926855.1_00899	mecI	mecA-type methicillin resistance repressor MecI	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	123	123	100.00	100.00	123	WP_000369214.1	mecA-type methicillin resistance repressor MecI	NF000243.1	mecA-type methicillin resistance repressor MecI
GCA_012926855.1_01229	icaC	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	plus	VIRULENCE	VIRULENCE	NA	NA	BLASTP	357	350	100.00	76.86	350	AUU58561.1	polysaccharide intercellular adhesin biosynthesis/export protein IcaC	NA	NA
GCA_012926855.1_01270	fosB	FosB/FosD family fosfomycin resistance bacillithiol transferase	core	AMR	AMR	FOSFOMYCIN	FOSFOMYCIN	HMM	140	140	97.86	71.53	137	WP_072419811.1	FosB/FosD family fosfomycin resistance bacillithiol transferase	NF000493.1	FosB/FosD family fosfomycin resistance bacillithiol transferase
GCA_012926855.1_01288	qacA	quaternary ammonium compound efflux MFS transporter QacA	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	EXACTP	514	514	100.00	100.00	514	WP_000622776.1	quaternary ammonium compound efflux MFS transporter QacA	NF000089.1	QacA/B family quaternary ammonium compound efflux MFS transporter
GCA_012926855.1_01289	qacR	multidrug-binding transcriptional regulator QacR	plus	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	BLASTP	186	188	98.94	98.92	186	ADK23698.1	multidrug-binding transcriptional regulator QacR	NA	NA
GCA_012926855.1_01296	ant(9)-Ia	aminoglycoside nucleotidyltransferase ANT(9)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	SPECTINOMYCIN	EXACTP	260	260	100.00	100.00	260	WP_000067268.1	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NF012212.1	ANT(9) family aminoglycoside nucleotidyltransferase
GCA_012926855.1_01297	erm	23S ribosomal RNA methyltransferase Erm	core	AMR	AMR	MACROLIDE	MACROLIDE	HMM	228	243	100.00	93.83	243	WP_001072201.1	23S ribosomal RNA methyltransferase Erm	NF000499.2	23S ribosomal RNA methyltransferase Erm
GCA_012926855.1_01299	aadD1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN/TOBRAMYCIN	BLASTP	247	253	97.63	100.00	247	WP_001014230.1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	NF000181.1	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia
GCA_012926855.1_01300	bleO	bleomycin binding protein	core	AMR	AMR	BLEOMYCIN	BLEOMYCIN	EXACTP	134	134	100.00	100.00	134	WP_001242578.1	bleomycin binding protein	NF000027.1	bleomycin binding protein
GCA_012926855.1_01902	dfrS1	trimethoprim-resistant dihydrofolate reductase DfrS1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	ALLELEP	161	161	100.00	100.00	161	WP_000175735.1	trimethoprim-resistant dihydrofolate reductase DfrS1	NA	NA
GCA_012926855.1_02137	aac(6')-Ie/aph(2'')-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	EXACTP	479	479	100.00	100.00	479	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2'')-Ia