Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_016939715.1_00024	aadA1	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_001206315.1	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NF033126.1	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1
GCA_016939715.1_00025	sat2	streptothricin N-acetyltransferase Sat2	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	EXACTP	174	174	100.00	100.00	174	WP_000704156.1	streptothricin N-acetyltransferase Sat2	NF000358.1	streptothricin N-acetyltransferase Sat2
GCA_016939715.1_00026	dfrA1	trimethoprim-resistant dihydrofolate reductase DfrA1	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	EXACTP	157	157	100.00	100.00	157	WP_000777554.1	trimethoprim-resistant dihydrofolate reductase DfrA1	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA
GCA_016939715.1_01502	catA	type A-4 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	BLASTP	217	217	100.00	96.77	217	WP_063843208.1	type A-4 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase
GCA_016939715.1_02518	blaCTX-M-14	extended-spectrum class A beta-lactamase CTX-M-14	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_001617865.1	extended-spectrum class A beta-lactamase CTX-M-14	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase
GCA_016939715.1_02714	blaCTX-M-14	extended-spectrum class A beta-lactamase CTX-M-14	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	291	291	100.00	100.00	291	WP_001617865.1	extended-spectrum class A beta-lactamase CTX-M-14	NF033089.1	CTX-M family extended-spectrum class A beta-lactamase
GCA_016939715.1_03285	terD	tellurium resistance membrane protein TerD	plus	STRESS	METAL	TELLURIUM	TELLURIUM	BLASTP	192	192	100.00	92.19	192	AAA98292.1	tellurium resistance membrane protein TerD	NA	NA
GCA_016939715.1_03289	terZ	tellurium resistance-associated protein TerZ	plus	STRESS	METAL	TELLURIUM	TELLURIUM	EXACTP	194	194	100.00	100.00	194	AAD47284.1	tellurium resistance-associated protein TerZ	NA	NA
GCA_016939715.1_03300	tet(J)	tetracycline efflux MFS transporter Tet(J)	core	AMR	AMR	TETRACYCLINE	TETRACYCLINE	BLASTP	398	398	100.00	99.75	398	WP_004245621.1	tetracycline efflux MFS transporter Tet(J)	NF012194.0	tetracycline efflux MFS transporter Tet(J)
GCA_016939715.1_03870	catA1	type A-1 chloramphenicol O-acetyltransferase	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	219	219	100.00	100.00	219	WP_000412211.1	type A-1 chloramphenicol O-acetyltransferase	NF000491.1	type A chloramphenicol O-acetyltransferase
GCA_016939715.1_03877	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase
GCA_016939715.1_03879	aph(3')-Ia	aminoglycoside O-phosphotransferase APH(3')-Ia	core	AMR	AMR	AMINOGLYCOSIDE	KANAMYCIN	EXACTP	271	271	100.00	100.00	271	WP_000018329.1	aminoglycoside O-phosphotransferase APH(3')-Ia	NF051474.1	aminoglycoside O-phosphotransferase APH(3')-Ia
GCA_016939715.1_03883	sul2	sulfonamide-resistant dihydropteroate synthase Sul2	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	271	271	100.00	100.00	271	WP_001043265.1	sulfonamide-resistant dihydropteroate synthase Sul2	NF000295.1	sulfonamide-resistant dihydropteroate synthase Sul2
GCA_016939715.1_03884	aph(3'')-Ib	aminoglycoside O-phosphotransferase APH(3'')-Ib	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	267	267	100.00	100.00	267	WP_001082319.1	aminoglycoside O-phosphotransferase APH(3'')-Ib	NF032895.1	aminoglycoside O-phosphotransferase APH(3'')-Ib
GCA_016939715.1_03885	aph(6)-Id	aminoglycoside O-phosphotransferase APH(6)-Id	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	278	278	100.00	100.00	278	WP_000480968.1	aminoglycoside O-phosphotransferase APH(6)-Id	NF012171.0	APH(6)-I family aminoglycoside O-phosphotransferase
GCA_016939715.1_03890	aac(3)-IId	aminoglycoside N-acetyltransferase AAC(3)-IId	core	AMR	AMR	AMINOGLYCOSIDE	GENTAMICIN	EXACTP	286	286	100.00	100.00	286	WP_000557454.1	aminoglycoside N-acetyltransferase AAC(3)-IId	NF033080.0	AAC(3)-II family aminoglycoside N-acetyltransferase
GCA_016939715.1_03898	dfrA17	trimethoprim-resistant dihydrofolate reductase DfrA17	core	AMR	AMR	TRIMETHOPRIM	TRIMETHOPRIM	BLASTP	199	157	100.00	99.36	157	WP_001389366.1	trimethoprim-resistant dihydrofolate reductase DfrA17	NF000330.1	trimethoprim-resistant dihydrofolate reductase DfrA
GCA_016939715.1_03900	aadA5	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	EXACTP	262	262	100.00	100.00	262	WP_000503573.1	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NF012157.0	ANT(3'')-I family aminoglycoside nucleotidyltransferase
GCA_016939715.1_03901	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE
GCA_016939715.1_03902	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1
GCA_016939715.1_03907	merD	mercury resistance co-regulator MerD	plus	STRESS	METAL	MERCURY	MERCURY	HMM	120	121	100.00	82.64	121	AAC38221.1	mercury resistance co-regulator MerD	NF033783.1	mercury resistance co-regulator MerD
GCA_016939715.1_03908	merA	mercury(II) reductase	plus	STRESS	METAL	MERCURY	MERCURY	HMM	537	561	95.19	85.32	538	AAC38220.1	mercury(II) reductase	TIGR02053.1	mercury(II) reductase
GCA_016939715.1_03910	merP	mercury resistance system periplasmic binding protein MerP	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	91	91	100.00	90.11	91	AAC38219.1	mercury resistance system periplasmic binding protein MerP	TIGR02052.1	mercury resistance system periplasmic binding protein MerP
GCA_016939715.1_03911	merR	mercury resistance transcriptional regulator MerR	plus	STRESS	METAL	MERCURY	MERCURY	BLASTP	189	144	100.00	93.75	144	CAA77320.1	mercury resistance transcriptional regulator MerR	NF010315.0	mercury resistance transcriptional regulator MerR
GCA_016939715.1_04026	blaTEM-1	broad-spectrum class A beta-lactamase TEM-1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	ALLELEP	286	286	100.00	100.00	286	WP_000027057.1	broad-spectrum class A beta-lactamase TEM-1	NF000531.2	TEM family class A beta-lactamase
GCA_016939715.1_04028	aac(6')-Ib	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	BLASTP	201	184	100.00	100.00	184	WP_063840280.1	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase	NF033074.0	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase
GCA_016939715.1_04032	blaKPC-2	carbapenem-hydrolyzing class A beta-lactamase KPC-2	core	AMR	AMR	BETA-LACTAM	CARBAPENEM	ALLELEP	293	293	100.00	100.00	293	WP_004199234.1	carbapenem-hydrolyzing class A beta-lactamase KPC-2	NF012141.1	KPC family carbapenem-hydrolyzing class A beta-lactamase
GCA_016939715.1_04037	mph(A)	Mph(A) family macrolide 2'-phosphotransferase	core	AMR	AMR	MACROLIDE	AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	301	301	100.00	100.00	301	WP_000219391.1	Mph(A) family macrolide 2'-phosphotransferase	NF000254.1	Mph(A) family macrolide 2'-phosphotransferase
GCA_016939715.1_04044	sul1	sulfonamide-resistant dihydropteroate synthase Sul1	core	AMR	AMR	SULFONAMIDE	SULFONAMIDE	EXACTP	279	279	100.00	100.00	279	WP_000259031.1	sulfonamide-resistant dihydropteroate synthase Sul1	NF000294.1	sulfonamide-resistant dihydropteroate synthase Sul1
GCA_016939715.1_04045	qacEdelta1	quaternary ammonium compound efflux SMR transporter QacE delta 1	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	ALLELEP	115	115	100.00	100.00	115	WP_000679427.1	quaternary ammonium compound efflux SMR transporter QacE delta 1	NF000276.2	quaternary ammonium compound efflux SMR transporter QacE
GCA_016939715.1_04046	arr-3	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	core	AMR	AMR	RIFAMYCIN	RIFAMYCIN	EXACTP	150	150	100.00	100.00	150	WP_001749986.1	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NF033144.1	NAD(+)--rifampin ADP-ribosyltransferase
GCA_016939715.1_04047	catB3	type B-3 chloramphenicol O-acetyltransferase CatB3	core	AMR	AMR	PHENICOL	CHLORAMPHENICOL	EXACTP	210	210	100.00	100.00	210	WP_000186237.1	type B-3 chloramphenicol O-acetyltransferase CatB3	NF000490.1	type B chloramphenicol O-acetyltransferase
GCA_016939715.1_04048	blaOXA-1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	core	AMR	AMR	BETA-LACTAM	CEPHALOSPORIN	ALLELEP	276	276	100.00	100.00	276	WP_001334766.1	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NF000388.2	OXA-1 family class D beta-lactamase
GCA_016939715.1_04049	aac(6')-Ib-cr	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr	core	AMR	AMR	AMINOGLYCOSIDE/QUINOLONE	AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN	BLASTP	199	184	100.00	100.00	184	WP_063840321.1	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NF033074.0	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase