Protein id	Element symbol	Element name	Scope	Type	Subtype	Class	Subclass	Method	Target length	Reference sequence length	% Coverage of reference	% Identity to reference	Alignment length	Closest reference accession	Closest reference name	HMM accession	HMM description
GCA_019349055.1_00016	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)
GCA_019349055.1_00087	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	195	244	76.23	96.77	186	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF000499.2	23S ribosomal RNA methyltransferase Erm
GCA_019349055.1_00113	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	195	244	76.23	96.77	186	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF000499.2	23S ribosomal RNA methyltransferase Erm
GCA_019349055.1_00126	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	EXACTP	244	244	100.00	100.00	244	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF012219.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)
GCA_019349055.1_00154	erm(C)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	core	AMR	AMR	LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN	CLINDAMYCIN/ERYTHROMYCIN/STREPTOGRAMIN B/TYLOSIN	PARTIALP	195	244	76.23	96.77	186	WP_001003263.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	NF000499.2	23S ribosomal RNA methyltransferase Erm
GCA_019349055.1_01487	aac(6')-Ie	AAC(6')-Ie family aminoglycoside N-acetyltransferase	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN/TOBRAMYCIN	HMM	173	479	35.49	99.41	170	WP_032490744.1	AAC(6')-Ie family aminoglycoside N-acetyltransferase	NF033693.0	AAC(6')-Ie family aminoglycoside N-acetyltransferase
GCA_019349055.1_01973	fusB	fusidic acid resistance EF-G-binding protein FusB	core	AMR	AMR	FUSIDIC ACID	FUSIDIC ACID	EXACTP	213	213	100.00	100.00	213	WP_000855537.1	fusidic acid resistance EF-G-binding protein FusB	NF000340.1	FusB family fusidic acid resistance EF-G-binding protein
GCA_019349055.1_02205	aac(6')-Ie/aph(2'')-Ia	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/GENTAMICIN/KANAMYCIN/TOBRAMYCIN	BLASTP	445	479	91.86	98.64	440	WP_001028144.1	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	NF000508.1	aminoglycoside O-phosphotransferase APH(2'')-Ia
GCA_019349055.1_02210	msr(A)	ABC-F type ribosomal protection protein Msr(A)	core	AMR	AMR	MACROLIDE/STREPTOGRAMIN	ERYTHROMYCIN/STREPTOGRAMIN B	BLASTP	488	488	100.00	99.80	488	WP_000438874.1	ABC-F type ribosomal protection protein Msr(A)	NF000256.1	ABC-F type ribosomal protection protein Msr(A)
GCA_019349055.1_02211	mph(C)	Mph(C) family macrolide 2'-phosphotransferase	core	AMR	AMR	MACROLIDE	ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN	EXACTP	299	299	100.00	100.00	299	WP_000196697.1	Mph(C) family macrolide 2'-phosphotransferase	NF000240.1	Mph(C) family macrolide 2'-phosphotransferase
GCA_019349055.1_02448	aph(3')-IIIa	aminoglycoside O-phosphotransferase APH(3')-IIIa	core	AMR	AMR	AMINOGLYCOSIDE	AMIKACIN/KANAMYCIN	EXACTP	264	264	100.00	100.00	264	WP_001096887.1	aminoglycoside O-phosphotransferase APH(3')-IIIa	NF033064.0	aminoglycoside O-phosphotransferase APH(3')-IIIa
GCA_019349055.1_02449	sat4	streptothricin N-acetyltransferase Sat4	core	AMR	AMR	STREPTOTHRICIN	STREPTOTHRICIN	BLASTP	180	180	100.00	99.44	180	WP_000627290.1	streptothricin N-acetyltransferase Sat4	NF000360.1	streptothricin N-acetyltransferase Sat4
GCA_019349055.1_02450	ant(6)-Ia	aminoglycoside nucleotidyltransferase ANT(6)-Ia	core	AMR	AMR	AMINOGLYCOSIDE	STREPTOMYCIN	PARTIALP	199	302	65.89	99.50	199	WP_001255866.1	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	NA
GCA_019349055.1_02455	qac	QacCGHJ group quaternary ammonium compound efflux SMR transporter	core	STRESS	BIOCIDE	QUATERNARY AMMONIUM	QUATERNARY AMMONIUM	HMM	107	107	100.00	75.70	107	WP_032489340.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter	NF000384.1	QacCGHJ group quaternary ammonium compound efflux SMR transporter
GCA_019349055.1_02462	blaI	penicillinase repressor BlaI	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	EXACTP	126	126	100.00	100.00	126	WP_001284656.1	penicillinase repressor BlaI	NF000186.1	penicillinase repressor BlaI
GCA_019349055.1_02463	blaR1	beta-lactam sensor/signal transducer BlaR1	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	585	585	100.00	99.66	585	WP_001096376.1	beta-lactam sensor/signal transducer BlaR1	NF033108.1	beta-lactam sensor/signal transducer BlaR1
GCA_019349055.1_02464	blaZ	penicillin-hydrolyzing class A beta-lactamase BlaZ	core	AMR	AMR	BETA-LACTAM	BETA-LACTAM	BLASTP	281	281	100.00	99.64	281	WP_000733283.1	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	NF033139.1	penicillin-hydrolyzing class A beta-lactamase BlaZ
GCA_019349055.1_02579	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	429	429	100.00	92.07	429	AAA25637.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_019349055.1_02582	mecA	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	core	AMR	AMR	BETA-LACTAM	METHICILLIN	EXACTP	668	668	100.00	100.00	668	WP_000721306.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NF000409.1	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA
GCA_019349055.1_02601	arsC	thioredoxin-dependent arsenate reductase	plus	STRESS	METAL	ARSENIC	ARSENATE	BLASTP	133	131	98.47	93.02	129	AAA25638.1	thioredoxin-dependent arsenate reductase	NA	NA
GCA_019349055.1_02602	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	BLASTP	430	429	100.00	94.41	429	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB
GCA_019349055.1_02688	arsB	arsenite efflux transporter membrane subunit ArsB	plus	STRESS	METAL	ARSENIC	ARSENITE	HMM	420	429	96.97	79.09	416	AAA27588.1	arsenite efflux transporter membrane subunit ArsB	NF033877.0	arsenite efflux transporter membrane subunit ArsB