core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	108583	108978	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_102	396	1	0.278	11	GGAG/GAGG	GENOMAD.103109.VV	5.655e-14	70	0	0	1	1246	Caudoviricetes	NA	NA	PF03592;K07474;COG3728	Terminase small subunit	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	102	1	1	396	MTHRQELFIQEYIKTGNATNSAIKAGYSKKTARVIGQENLTKPYIKKKINELSQKIACNSIMTAKERQEYLTKLINTADVKVSDKLKALDILNKMTGEYIQKVEVNGELKTENDSFKNLTTDELRKIIFDN	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0001	cloud	direct	high	396	1.0	GCA_027682085.1_00801
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	109571	109768	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_103	198	1	0.217	11	GGAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	103	2	989	1186	MIAISVNDIFDKIMGNEEEIIIKRNNEADDLVLLTAKKYNAILEELKKLKCNQGINKNNRNIKIK	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0002	cloud	direct	high	198	1.0	GCA_027682085.1_00802
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	110858	111430	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_104	573	-1	0.180	11	GGAGG	GENOMAD.226165.VP	0.0003645	43	0	0	0	1	NA	NA	NA	K20375;TIGR02612;COG3620	mobile mystery protein A	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	104	3	2276	2848	MDKYNYFLSAFIANVRSFKNLTQKKFGQKIDKSEIAIRKYESGQIKIPFSVLFLVIKIFELNIFEVKRLLDYVLFQSFIFPNEDNKKIKFSQSDIKECYNLFANDLSKIYNTNLKSENLDKIYYKSDLMNILKTNLHQYINAMLSTKNLTINDFSIDEINELLDSTLNVFNKKIDIIIKKRNNIAQNMDY	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0003	cloud	direct	high	573	1.0	GCA_027682085.1_00803
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	111603	111806	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_105	204	1	0.245	11	AGGAG	GENOMAD.069284.VV	1.905e-07	48	0	0	0	1246	Caudoviricetes	NA	NA	PF05339;COG5606;TIGR00673;K07727	Predicted DNA-binding protein, XRE-type HTH domain	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	105	4	3021	3224	MINLNLLNSKVALAGLTFKELAEKIGMPYQSLNNRKKGKIEFTSSEIKALKDILKLTNDDVAEIFLV	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0004	cloud	direct	high	204	1.0	GCA_027682085.1_00804
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	112003	112638	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_106	636	1	0.285	11	AGxAGG/AGGxGG	GENOMAD.089053.VV	1.164e-94	307	0	0	0	1246	Caudoviricetes	NA	NA	COG3499	Phage protein U	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	106	5	3421	4056	MSFFKQAVEMALSLSENQNQSYIQDIPLEVISEKSRSLAMTLSTKRVENGFNISDSVRKEPMIINITVVDNSKDYLLNRDKLLKLQELGEEVQFVFSNCDTYEHMIIENIEEIETDKQKYGFTYYITLRQIQVGEIKETDVKMDSKKAKTSGGKKKRTTAKVSTPTNAEVSNVNKVIGVSTGNNLGKALKRLNKGLNSITKAQLEEIKKYK	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0005	cloud	direct	high	636	1.0	GCA_027682085.1_00805
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	112657	113466	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_107	810	1	0.299	11	AGxAGG/AGGxGG	GENOMAD.072903.VV	8.578e-12	68	0	0	0	1246	Caudoviricetes	NA	NA	COG3646	Phage regulatory protein Rha	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	107	6	4075	4884	MEFLSKESINSKELLKQINYFREIEYKEKEANNTLTKAQKKRGHYIELRHDNLLRTIRDEFNMKINAVNKNAVKNEEIDQLNFEEMLKGRLNFEETSKDKIIPTSVEGIFISTYIDEWNRQKPMFILTIDQAKQVLMRESKVVRKAVIQYLNLLEKRIRELERKKGKITRKQETDSIKMLMEYGNIPKEKQHLYYMTYSKLPFIVLGMKKVSRDTLPADDLNLIKELESIIQVTILTSIIKGLDVKAIYQECKKVCSEALEDTEQKLIG	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0006	shell	direct	high	810	1.0	GCA_027682085.1_00806
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	113484	113672	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_108	189	1	0.291	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	108	7	4902	5090	MNNANRVTRAKAIRLKCLDCSCGQLTEIRECPIKDCALWCYRMGYEVDKNGKKIKFDNAKEN	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0007	cloud	direct	high	189	1.0	GCA_027682085.1_00807
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	113882	114208	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_109	327	1	0.269	11	4Base/6BMM	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	109	8	5300	5626	MIKKVYIDGLFMALSYEAKKIFIKRDDIDIKFKENQEEKRIITLLTVLGVHEVIGDYTISIDFEFMVLEIHKKYDFKVLRKLGKDDIDKIWTITMVEIDQLMTKEAKE	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0008	shell	direct	high	327	1.0	GCA_027682085.1_00808
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	114205	114321	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_110	117	1	0.291	11	AGGAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	110	9	5623	5739	MNLYIRGTMDEVIQKLKELEEKEKSLNITTDSDQANQR	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0009	cloud	direct	high	117	1.0	GCA_027682085.1_00809
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	114430	114738	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_111	309	1	0.214	11	AGGAG/GGAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	111	10	5848	6156	MEKEIKNIVFTFLDFMNDKEVLEKMILTRDSKKKIFKLLSELEENTISEEEKKKIFINIEKSILDTIELTQHLYFILGEKANQIDEFYSLDYDPFDRIKAGN	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0010	cloud	direct	high	309	1.0	GCA_027682085.1_00810
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	114756	116135	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_112	1380	1	0.257	11	GGA/GAG/AGG	GENOMAD.141444.VV	7.26e-26	115	0	0	0	1246	Caudoviricetes	NA	NA	PF01057;PF02257;TIGR01613;COG5545	phage/plasmid primase, P4 family, C-terminal domain	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	112	11	6174	7553	MDKRKLNDFLKEIGIDGQVLENQKDKINKFVDEINTKININSFFIAKKLVEENNLIRIDNLIYGYDEKCYRCLTNTEIENLIHQVNKNLNEKQRKEILKKVYFEAPEKEKDIDYISVKNGLINIADDDIVLYEHTPKIVTTFYIDYNYNPNADYTDILDYILDLVCDDDNLAKIIMEFLGYCLYPDCFLRKALVIKGDHRNGKSKFLEVLKIFFGTDNCCNLDIQDIVSRFGLFGIMNKSINLGDDISGQYIGDDSKFKKVIAGNDVLIEQKGKDAFTYRPIAKHIFSCNNMPRFDDKTGAVKDRLIFVPFSNTYSIEKGNLNPHIVKEMTSNENMEALLVLALQSLKELIKNNRFTYSYKSESCLDEFDKGNNPILYFIEEVQENSYLREKAFNNMPVAEAYEKYIKFCNENGFKSISKISFSKGIRANIENIEVKLVRNNGKINKTFKMLEQEATEK	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0011	cloud	direct	high	1380	1.0	GCA_027682085.1_00811
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	116707	116922	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_113	216	1	0.241	11	4Base/6BMM	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	113	12	8125	8340	MKIEASEKLKIELSEFSKFIKYSEISEDLKREIIQRAVNLINISSKESFIKGGEHIINKLKSQKKGLKNEN	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0012	cloud	direct	high	216	1.0	GCA_027682085.1_00812
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	116912	117391	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_114	480	1	0.260	11	AGxAGG/AGGxGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	114	13	8330	8809	MKIKLNKKTYNTDDYKGKTGLLLEHICYELLNDDRYNFMDRLEFTFGYILKIMGFITQNNYNPPYNFDNLKTDRDKLELVIEQYKFIKYLLSGDKRDYTEYLEELEEYEVFSKDKAIMCLVDYKMARFSNEIFEEMGIKIIDRLDNGAIIVQDMKEYKN	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0013	cloud	direct	high	480	1.0	GCA_027682085.1_00813
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	117422	117586	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_115	165	1	0.279	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	115	14	8840	9004	MKMLDVNEVKTILKVSKPKAYEIIRTLNTELKNKGYLTVQGKIREDYLFQRMGV	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0014	shell	direct	high	165	1.0	GCA_027682085.1_00814
GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	genomad	CDS	117589	118650	GCA_027682085.1	JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1	GCA_027682085.1_JAQDAI010000002.1	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650_116	1062	1	0.262	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad	GCA_027682085.1|JAQDAI010000002.1	116	15	9007	10068	MSAEKEKIKGEYTGRWNARFTIKLLNNKSKRIFKRGFNSKKEALEYEKKVILDNSLGSNIPFKIAVNQYLEFKKLRIKELTYMNMSNILNSITYFDNLLISDITPIQISNFQNDLLRKYKGSSIRTINAYVKMLFTWCVRYKNLTSNPFDMVDRLKLEVSKRMSIITVDEFNQIVEQVNNPDMKLMFKLLFWTGLRIGEARALKIDDIDFNNKTISVTKSYTNLSGKSIITTPKTKGSIRVIKIDDVLLSEIKDYIDKAKYILDDNFIFRFNKASYRYNFKNATIKVLGRDLRVHDLRHSHASFLINNGVDILLISKRLGHSNTAMTLNVYSHLYPDRENEAINLINKLKANK	GCA_027682085.1|JAQDAI010000002.1|provirus_108583_118650	GCA_027682085.1|JAQDAI010000002.1@region_108583_118650@tool_genomad_CDS_0015	shell	direct	high	1062	1.0	GCA_027682085.1_00815