otid domain phylum klass order family genus species subspecies general_habitat major_body_site secondary_sites major_site_abundance subsite_of_primary secondary_site_abundance HMT-0001 Bacteria Pseudomonadota Alphaproteobacteria Hyphomicrobiales Bartonellaceae Bartonella schoenbuchensis Pathogen Pathogen none assigned scarce Zoonotic pathogen NA HMT-0002 Bacteria Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter sp. HMT-002 Environmental Environmental none assigned scarce Soil or Water NA HMT-0003 Bacteria Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas glacialis Environmental Environmental none assigned scarce Soil or Water NA HMT-0004 Bacteria Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas sp. HMT-004 Environmental Environmental none assigned scarce Soil or Water NA HMT-0005 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter lwoffii Environmental Environmental Opportunistic Pathogen low Soil or Water NA HMT-0006 Bacteria Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Novosphingobium humi Environmental Environmental none assigned scarce Soil or Water NA HMT-0007 Bacteria Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Erythrobacter tepidarius Environmental Environmental none assigned scarce Soil or Water NA HMT-0008 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Mogibacterium vescum Human host Oral none assigned low Throat NA HMT-0010 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter radioresistens Environmental Environmental none assigned scarce Soil or Water NA HMT-0011 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella sp. HMT-011 Human host Oral none assigned scarce Subgingival plaque NA HMT-0012 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella sp. HMT-012 Human host Oral none assigned medium Supragingival plaque NA HMT-0013 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria bacilliformis Human host Oral none assigned medium Supragingival plaque NA HMT-0014 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria oralis Human host Oral none assigned medium Subgingival plaque NA HMT-0017 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Anaerococcus octavius Human host Skin Nasal medium Skin medium HMT-0018 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria sp. HMT-018 Human host Oral none assigned medium Subgingival plaque NA HMT-0019 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium accolens Human host Nasal none assigned high Nasal NA HMT-0020 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria sp. HMT-020 Human host Oral none assigned low Supragingival plaque NA HMT-0021 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus vestibularis Human host Oral none assigned medium Buccal mucosa NA HMT-0022 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Lautropia mirabilis Human host Oral none assigned high Supragingival plaque NA HMT-0023 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Delftia acidovorans Environmental Environmental none assigned scarce Soil or Water NA HMT-0024 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Schlegelella thermodepolymerans Environmental Environmental none assigned scarce Soil or Water NA HMT-0025 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Leptothrix sp. HMT-025 Environmental Environmental none assigned scarce Soil or Water NA HMT-0026 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Schlegelella aquatica Environmental Environmental none assigned scarce Soil or Water NA HMT-0027 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus gilardii Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0028 Bacteria Pseudomonadota Betaproteobacteria Rhodocyclales Rhodocyclaceae Oryzomicrobium terrae Environmental Environmental none assigned scarce Soil or Water NA HMT-0029 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema vincentii clade-029 Human host Oral none assigned medium Periodontitis NA HMT-0030 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium afermentans Human host Skin Nasal low Skin low HMT-0031 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium amycolatum Human host Nasal Skin scarce Nasal scarce HMT-0032 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas sp. HMT-032 Environmental Environmental none assigned scarce Soil or Water NA HMT-0033 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium appendicis Human host Nasal Skin low Nasal scarce HMT-0034 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium aurimucosum clade-034 Human host Nasal Skin low Nasal scarce HMT-0035 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus paraphrohaemolyticus Human host Oral none assigned medium Buccal mucosa NA HMT-0036 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus sp. HMT-036 Human host Oral none assigned high Keratinized gingiva NA HMT-0037 Bacteria Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas nitritireducens Environmental Environmental none assigned scarce Soil or Water NA HMT-0038 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Olsenella uli Human host Oral none assigned medium Periodontitis NA HMT-0039 Bacteria Pseudomonadota Oligoflexia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio sp. HMT-039 Environmental Environmental none assigned scarce Soil or Water NA HMT-0040 Bacteria Pseudomonadota Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae Desulfovibrio sp. HMT-040 Environmental Environmental none assigned scarce Soil or Water NA HMT-0041 Bacteria Pseudomonadota Deltaproteobacteria Desulfobacterales Desulfobulbaceae Desulfobulbus oralis Human host Oral none assigned medium Periodontitis NA HMT-0042 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Mogibacterium timidum Human host Oral none assigned medium Periodontitis NA HMT-0043 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces oris clade-043 Human host Oral none assigned high Supragingival plaque NA HMT-0044 Bacteria Pseudomonadota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter sp. HMT-044 Human host Oral none assigned medium Hard palate NA HMT-0045 Bacteria Bacillota Bacilli Caryophanales Bacillaceae Alkalihalobacillus clausii Environmental Environmental none assigned scarce Soil or Water NA HMT-0046 Bacteria Bacillota Bacilli Caryophanales Gemellaceae Gemella morbillorum Human host Oral none assigned medium Subgingival plaque NA HMT-0047 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium jeikeium Human host Nasal Skin low Nasal scarce HMT-0048 Bacteria Bacillota Bacilli Caryophanales Paenibacillaceae Paenibacillus typhae Environmental Environmental none assigned scarce Soil or Water NA HMT-0049 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium kroppenstedtii Human host Skin Nasal high Skin medium HMT-0050 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium macginleyi Human host Nasal none assigned high Nasal NA HMT-0051 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus vaginalis Human host Vaginal Oral medium Vaginal medium HMT-0052 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus sp. HMT-052 Human host Oral none assigned scarce not determined NA HMT-0053 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium minutissimum Human host Nasal Skin low Nasal low HMT-0054 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium pilbarense Human host Nasal Skin low Nasal low HMT-0056 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sp. HMT-056 Human host Oral none assigned medium Subgingival plaque NA HMT-0057 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sp. HMT-057 Human host Oral none assigned medium not determined NA HMT-0058 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sp. HMT-058 Human host Oral none assigned low Supragingival plaque NA HMT-0059 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium propinquum Human host Nasal none assigned medium Nasal NA HMT-0060 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium pseudodiphtheriticum Human host Nasal none assigned high Nasal NA HMT-0061 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus infantis clade-061 Human host Oral none assigned high Hard palate NA HMT-0062 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium simulans Human host Nasal Skin medium Nasal scarce HMT-0063 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium singulare Human host Nasal Skin low Nasal scarce HMT-0064 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sp. HMT-064 Human host Oral none assigned low not determined NA HMT-0066 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sp. HMT-066 Human host Oral none assigned medium Tongue dorsum NA HMT-0070 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sp. HMT-070 Human host Oral none assigned scarce not determined NA HMT-0071 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus oralis subsp. tigurinus Human host Oral none assigned medium Supragingival plaque NA HMT-0072 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium striatum Human host Nasal Skin low Nasal low HMT-0073 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus australis Human host Oral none assigned medium Tongue dorsum NA HMT-0074 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sp. HMT-074 Human host Oral none assigned medium not determined NA HMT-0075 Bacteria Bacillota Clostridia Eubacteriales Ruminococcaceae Ruminococcaceae [G1] bacterium HMT-075 Human host Oral none assigned high Saliva NA HMT-0076 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus warneri Human host Skin Nasal low Skin low HMT-0077 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium tuberculostearicum Human host Nasal Skin medium Nasal medium HMT-0078 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium sp. HMT-078 Human host Oral none assigned medium Periodontitis NA HMT-0079 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces oris clade-079 Human host Oral none assigned medium Subgingival plaque NA HMT-0080 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio sp. HMT-080 Human host Oral none assigned low Palatine tonsils NA HMT-0081 Bacteria Bacillota Clostridia Peptostreptococcales Filifactoraceae Peptoanaerobacter stomatis Human host Oral none assigned low Subgingival plaque NA HMT-0082 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum orale Human host Oral none assigned medium Throat NA HMT-0083 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum sp. HMT-083 Human host Oral Nasal medium Tongue dorsum low HMT-0084 Bacteria Actinomycetota Actinomycetes Micrococcales Micrococcaceae Kocuria palustris Environmental Environmental none assigned scarce Soil or Water NA HMT-0085 Bacteria Bacillota Clostridia Eubacteriales Ruminococcaceae Ruminococcaceae [G2] bacterium HMT-085 Human host Oral none assigned medium Saliva NA HMT-0086 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnospiraceae [G7] bacterium HMT-086 Human host Oral none assigned scarce not determined NA HMT-0087 Bacteria Actinomycetota Actinomycetes Micrococcales Micrococcaceae Micrococcus luteus Environmental Environmental Opportunistic Pathogen low Soil or Water NA HMT-0088 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnospiraceae [G2] bacterium HMT-088 Human host Oral none assigned low Subgingival plaque NA HMT-0089 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum sp. HMT-089 Human host Oral none assigned scarce not determined NA HMT-0090 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio sp. HMT-090 Human host no data none assigned scarce Unassigned NA HMT-0091 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovoracaceae [G2] bacterium HMT-091 Human host Oral none assigned low Palatine tonsils NA HMT-0092 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria weaveri Environmental Environmental none assigned low Animal host NA HMT-0093 Bacteria Bacillota Clostridia Eubacteriales Clostridiales [F1] Clostridiales [F1 G1] bacterium HMT-093 Human host Oral none assigned low Palatine tonsils NA HMT-0094 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnospiraceae [G10] bacterium HMT-094 Human host Oral none assigned scarce not determined NA HMT-0095 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Shuttleworthia satelles Human host Oral none assigned low Periodontitis NA HMT-0096 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnospiraceae [G2] bacterium HMT-096 Human host Oral none assigned medium Tongue dorsum NA HMT-0097 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Moryella sp. HMT-097 Human host Oral none assigned medium Throat NA HMT-0098 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Moraxella nonliquefaciens Human host Nasal none assigned medium Nasal NA HMT-0099 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria macacae Environmental Environmental Opportunistic Pathogen low Animal host NA HMT-0100 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnospiraceae [G3] bacterium HMT-100 Human host Oral none assigned medium Supragingival plaque NA HMT-0101 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria perflava Human host Oral none assigned high Throat NA HMT-0102 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium sp. HMT-102 Human host Oral Gastrointestinal Tract low Periodontitis scarce HMT-0103 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovoracaceae [G4] bacterium HMT-103 Human host Oral none assigned low Subgingival plaque NA HMT-0104 Bacteria Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Paracoccus yeei Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0105 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovoracaceae [G1] infirmum Human host Oral none assigned medium Periodontitis NA HMT-0106 Bacteria Bacillota Clostridia Peptostreptococcales Filifactoraceae Peptoanaerobacter yurii subsp. schtitka Human host Oral none assigned no data not determined NA HMT-0107 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum umeaense Human host Oral none assigned low Tongue dorsum NA HMT-0108 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium asaccharolyticum Human host Oral none assigned medium Saliva NA HMT-0109 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Peptoniphilus harei Human host Skin Vaginal low Skin low HMT-0110 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Parvimonas sp. HMT-110 Human host Oral none assigned medium Subgingival plaque NA HMT-0111 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Parvimonas micra Human host Oral none assigned medium Subgingival plaque NA HMT-0112 Bacteria Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Peptostreptococcus stomatis Human host Oral none assigned medium Periodontitis NA HMT-0113 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Peptoniphilaceae [G1] bacterium HMT-113 Human host Oral none assigned low Periodontitis NA HMT-0114 Bacteria Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium granulosum Human host Skin Nasal high Skin medium HMT-0115 Bacteria Pseudomonadota Gammaproteobacteria Enterobacterales Yersiniaceae Serratia marcescens Human host Oral Environmental low Saliva scarce HMT-0116 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus capitis Human host Skin Nasal medium Skin medium HMT-0117 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus cohnii Human host Skin Nasal low Skin low HMT-0118 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Dialister invisus Human host Gastrointestinal Tract Oral high Stool medium HMT-0119 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Dialister sp. HMT-119 Human host Oral none assigned scarce not determined NA HMT-0120 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus haemolyticus Human host Nasal Skin low Nasal low HMT-0121 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Anaeroglobus geminatus Human host Oral none assigned medium Periodontitis NA HMT-0122 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera micronuciformis Human host Oral none assigned high Throat NA HMT-0123 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Anaeroglobus massiliensis Human host Oral Vaginal low Throat scarce HMT-0124 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas artemidis Human host Oral none assigned medium Periodontitis NA HMT-0125 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas flueggei Human host Oral none assigned medium Periodontitis NA HMT-0126 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-126 Human host Oral none assigned medium Periodontitis NA HMT-0127 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus hominis Human host Skin Nasal medium Skin low HMT-0128 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus lugdunensis Human host Nasal Skin low Nasal low HMT-0129 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonadaceae [G1] bacterium HMT-129 Human host Oral none assigned low Subgingival plaque NA HMT-0130 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas noxia Human host Oral none assigned high Periodontitis NA HMT-0131 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Mitsuokella sp. HMT-131 Human host Oral none assigned low Periodontitis NA HMT-0132 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonadaceae [G1] bacterium HMT-132 Human host Oral none assigned low Subgingival plaque NA HMT-0133 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-133 Human host Oral none assigned low Periodontitis NA HMT-0134 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-134 Human host Oral none assigned low Subgingival plaque NA HMT-0135 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonadaceae [G1] bacterium HMT-135 Human host Oral none assigned low Subgingival plaque NA HMT-0136 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas felix Human host Oral none assigned medium Throat NA HMT-0138 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas timonae Human host Oral none assigned medium Periodontitis NA HMT-0139 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas dianae Human host Oral none assigned medium Periodontitis NA HMT-0141 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus pasteuri Human host Skin Nasal low Skin low HMT-0142 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus pettenkoferi Human host Skin none assigned scarce Skin NA HMT-0144 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces oris clade-144 Human host Oral none assigned medium Periodontitis NA HMT-0145 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonadaceae [G1] bacterium HMT-145 Human host Oral none assigned scarce Subgingival plaque NA HMT-0146 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-146 Human host Oral none assigned low Subgingival plaque NA HMT-0147 Bacteria Actinomycetota Actinomycetes Micrococcales Micrococcaceae Rothia mucilaginosa clade-147 Human host Oral none assigned high Tongue dorsum NA HMT-0148 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonadaceae [G1] bacterium HMT-148 Human host Oral none assigned scarce Subgingival plaque NA HMT-0150 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonadaceae [G1] bacterium HMT-150 Human host Oral none assigned low Subgingival plaque NA HMT-0151 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sputigena Human host Oral none assigned high Periodontitis NA HMT-0152 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus thermophilus Environmental Environmental Nasal low Food low HMT-0153 Bacteria Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella aerogenes Human host Nasal none assigned medium Nasal NA HMT-0154 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Moraxella lincolnii Human host Nasal none assigned medium Nasal NA HMT-0155 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonadaceae [G1] bacterium HMT-155 Human host Oral none assigned low Subgingival plaque NA HMT-0156 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella nakazawae Human host Oral none assigned high Throat NA HMT-0157 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella sp. HMT-157 Human host Oral none assigned no data not determined NA HMT-0158 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella rogosae Human host Oral none assigned high Tongue dorsum NA HMT-0160 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella dispar Human host Oral none assigned high Throat NA HMT-0161 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella parvula Human host Oral none assigned high Subgingival plaque NA HMT-0163 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnospiraceae [G7] bacterium HMT-163 Human host Oral none assigned scarce Subgingival plaque NA HMT-0164 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Catonella sp. HMT-164 Human host Oral none assigned scarce Palatine tonsils NA HMT-0165 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Catonella morbi Human host Oral none assigned medium Subgingival plaque NA HMT-0166 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Johnsonella sp. HMT-166 Human host Oral none assigned scarce Subgingival plaque NA HMT-0167 Bacteria Bacillota Clostridia Eubacteriales Peptococcaceae Peptococcus sp. HMT-167 Human host Oral none assigned low Subgingival plaque NA HMT-0168 Bacteria Bacillota Clostridia Eubacteriales Peptococcaceae Peptococcus sp. HMT-168 Human host Oral none assigned low Palatine tonsils NA HMT-0169 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces oris clade-169 Human host Oral none assigned high Supragingival plaque NA HMT-0170 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces sp. HMT-170 Human host Oral none assigned high Subgingival plaque NA HMT-0171 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces oris clade-171 Human host Oral none assigned high Supragingival plaque NA HMT-0172 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia sp. HMT-172 Human host Oral none assigned high Tongue dorsum NA HMT-0173 Bacteria Actinomycetota Actinomycetes Mycobacteriales Lawsonellaceae Lawsonella clevelandensis Human host Nasal none assigned medium Nasal NA HMT-0174 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseriaceae [G1] bacterium HMT-174 Human host Nasal Skin medium Nasal medium HMT-0176 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces naeslundii Human host Oral none assigned high Supragingival plaque NA HMT-0178 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia hongkongensis Human host Oral none assigned medium Periodontitis NA HMT-0179 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces timonensis Human host Oral none assigned low Subgingival plaque NA HMT-0180 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia sp. HMT-180 Human host Oral none assigned medium Periodontitis NA HMT-0181 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia lingnae Human host Oral none assigned medium Tongue dorsum NA HMT-0182 Bacteria Bacillota Bacilli Caryophanales Bacillaceae Anoxybacillus flavithermus Environmental Environmental none assigned scarce Soil or Water NA HMT-0183 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Peptidiphaga sp. HMT-183 Human host Oral none assigned high Subgingival plaque NA HMT-0184 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium tuscaniense Human host Skin none assigned scarce Skin NA HMT-0185 Bacteria Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium ginsengisoli Environmental Environmental none assigned scarce Soil or Water NA HMT-0186 Bacteria Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium sp. HMT-186 Environmental Environmental none assigned scarce Soil or Water NA HMT-0187 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Peptoniphilus grossensis Human host Nasal Gastrointestinal Tract scarce Nasal scarce HMT-0188 Bacteria Actinomycetota Actinomycetes Micrococcales Micrococcaceae Rothia aeria Human host Oral none assigned high Supragingival plaque NA HMT-0189 Bacteria Actinomycetota Actinomycetes Micrococcales Micrococcaceae Kocuria atrinae Environmental Environmental none assigned scarce Food NA HMT-0190 Bacteria Actinomycetota Actinomycetes Micrococcales Dermatophilaceae Arsenicicoccus sp. HMT-190 Environmental Environmental none assigned scarce Soil or Water NA HMT-0191 Bacteria Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Propionibacterium acidifaciens Human host Oral none assigned low Periodontitis NA HMT-0192 Bacteria Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Brooklawnia sp. HMT-192 Human host Oral none assigned low Supragingival plaque NA HMT-0193 Bacteria Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium modestum Human host Skin Nasal low Skin scarce HMT-0194 Bacteria Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Arachnia rubra Human host Oral none assigned high Subgingival plaque NA HMT-0195 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Scardovia wiggsiae Human host Oral none assigned medium Periodontitis NA HMT-0196 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Enhydrobacter aerosaccus Human host no data none assigned scarce Unassigned NA HMT-0197 Bacteria Actinomycetota Actinomycetes Micrococcales Micrococcaceae Kocuria rhizophila Environmental Environmental none assigned scarce Soil or Water NA HMT-0198 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Alloscardovia omnicolens Human host Oral none assigned low Saliva NA HMT-0199 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Lancefieldella sp. HMT-199 Human host Oral none assigned medium Periodontitis NA HMT-0200 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium vincentii Human host Oral none assigned high Subgingival plaque NA HMT-0201 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium periodonticum Human host Oral none assigned high Throat NA HMT-0202 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium polymorphum Human host Oral none assigned medium Supragingival plaque NA HMT-0203 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium sp. HMT-203 Human host Oral none assigned medium Subgingival plaque NA HMT-0204 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium sp. HMT-204 Human host Oral none assigned medium Subgingival plaque NA HMT-0205 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium sp. HMT-205 Human host Oral none assigned low Subgingival plaque NA HMT-0206 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium sp. HMT-206 Human host Oral none assigned medium Buccal mucosa NA HMT-0207 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium gottingense Human host Nasal Skin low Nasal low HMT-0208 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium bovis Human host Skin none assigned scarce Skin NA HMT-0209 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax ebreus Environmental Environmental none assigned low Soil or Water NA HMT-0211 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Paenacidovorax caeni Environmental Environmental none assigned low Soil or Water NA HMT-0212 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Pseudoleptotrichia sp. HMT-212 Human host Oral none assigned medium Supragingival plaque NA HMT-0213 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia hongkongensis Human host Oral none assigned medium Subgingival plaque NA HMT-0214 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia shahii Human host Oral none assigned medium Throat NA HMT-0215 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Pseudoleptotrichia sp. HMT-215 Human host Oral none assigned medium Throat NA HMT-0216 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax temperans Environmental Environmental none assigned low Soil or Water NA HMT-0217 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Pseudoleptotrichia sp. HMT-217 Human host Oral none assigned low Supragingival plaque NA HMT-0218 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp. HMT-218 Human host Oral none assigned medium Throat NA HMT-0219 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Pseudoleptotrichia sp. HMT-219 Human host Oral none assigned medium Supragingival plaque NA HMT-0221 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp. HMT-221 Human host Oral none assigned medium Throat NA HMT-0222 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia wadei Human host Oral none assigned medium Periodontitis NA HMT-0223 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp. HMT-223 Human host Oral none assigned medium Subgingival plaque NA HMT-0224 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia hofstadii Human host Oral none assigned medium Supragingival plaque NA HMT-0225 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp. HMT-225 Human host Oral none assigned medium Supragingival plaque NA HMT-0226 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-226 Human host Oral none assigned medium Subgingival plaque NA HMT-0227 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-227 Human host Oral none assigned scarce Subgingival plaque NA HMT-0228 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-228 Human host Oral none assigned scarce Subgingival plaque NA HMT-0229 Bacteria Cyanobacteriota Cyanophyceae Oscillatoriales Microcoleaceae Arthrospira platensis Environmental Environmental none assigned scarce Soil or Water NA HMT-0230 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-230 Human host Oral none assigned medium Subgingival plaque NA HMT-0231 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-231 Human host Oral none assigned medium Subgingival plaque NA HMT-0232 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-232 Human host Oral none assigned scarce Subgingival plaque NA HMT-0233 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus schleiferi Environmental Environmental none assigned scarce Soil or Water NA HMT-0234 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-234 Human host Oral none assigned low Subgingival plaque NA HMT-0235 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-235 Human host Oral none assigned scarce Subgingival plaque NA HMT-0236 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-236 Human host Oral none assigned low Subgingival plaque NA HMT-0237 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-237 Human host Oral none assigned medium Subgingival plaque NA HMT-0238 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-238 Human host Oral none assigned low Subgingival plaque NA HMT-0239 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-239 Human host Oral none assigned low Subgingival plaque NA HMT-0240 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia sp. HMT-240 Human host Oral none assigned high Tongue dorsum NA HMT-0241 Bacteria Bacillota Bacilli Caryophanales Listeriaceae Brochothrix thermosphacta Environmental Environmental none assigned scarce Food spoilage NA HMT-0242 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-242 Human host Oral none assigned scarce Subgingival plaque NA HMT-0243 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Jeotgalicoccus marinus Environmental Environmental none assigned scarce Soil or Water NA HMT-0244 Bacteria Pseudomonadota Alphaproteobacteria Rhodospirillales Acetobacteraceae Roseomonas gilardii Environmental Environmental none assigned scarce Soil or Water NA HMT-0245 Bacteria Pseudomonadota Alphaproteobacteria Rhodospirillales Acetobacteraceae Roseomonas mucosa Human host Skin Opportunistic Pathogen scarce Skin NA HMT-0246 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-246 Human host Oral none assigned low Subgingival plaque NA HMT-0247 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-247 Human host Oral none assigned medium Subgingival plaque NA HMT-0248 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium sp. HMT-248 Human host Oral none assigned high Keratinized gingiva NA HMT-0249 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-249 Human host Oral none assigned scarce Subgingival plaque NA HMT-0250 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-250 Human host Oral none assigned scarce Subgingival plaque NA HMT-0251 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-251 Human host Oral none assigned scarce Subgingival plaque NA HMT-0252 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-252 Human host Oral none assigned scarce Subgingival plaque NA HMT-0253 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-253 Human host Oral none assigned low Subgingival plaque NA HMT-0254 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-254 Human host Oral none assigned low Subgingival plaque NA HMT-0256 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-256 Human host Oral none assigned scarce Subgingival plaque NA HMT-0257 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-257 Human host Oral none assigned medium Subgingival plaque NA HMT-0258 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-258 Human host Oral none assigned low Subgingival plaque NA HMT-0260 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-260 Human host Oral none assigned low Subgingival plaque NA HMT-0261 Bacteria Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Segetibacter aerophilus Environmental Environmental none assigned scarce Soil or Water NA HMT-0262 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-262 Human host Oral none assigned low Subgingival plaque NA HMT-0263 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-263 Human host Oral none assigned scarce Subgingival plaque NA HMT-0264 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-264 Human host Oral none assigned scarce Subgingival plaque NA HMT-0265 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-265 Human host Oral none assigned scarce Subgingival plaque NA HMT-0266 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Leptothrix sp. HMT-266 Human host no data none assigned scarce Unassigned NA HMT-0268 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-268 Human host Oral none assigned low Subgingival plaque NA HMT-0269 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-269 Human host Oral none assigned scarce Subgingival plaque NA HMT-0270 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-270 Human host Oral none assigned low Subgingival plaque NA HMT-0271 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-271 Human host Oral none assigned scarce Subgingival plaque NA HMT-0272 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola abscessus Human host Oral none assigned medium Periodontitis NA HMT-0273 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas endodontalis Human host Oral none assigned high Periodontitis NA HMT-0274 Bacteria Bacteroidota Bacteroidia Bacteroidales Paludibacteraceae Paludibacteraceae [G1] bacterium HMT-274 Human host Oral none assigned high Periodontitis NA HMT-0275 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas sp. HMT-275 Human host Oral none assigned low Saliva NA HMT-0276 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Moraxella sp. HMT-276 Human host Oral none assigned scarce Supragingival plaque NA HMT-0277 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas sp. HMT-277 Human host Oral none assigned low Supragingival plaque NA HMT-0278 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas sp. HMT-278 Human host Oral none assigned medium Subgingival plaque NA HMT-0279 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas pasteri Human host Oral none assigned high Saliva NA HMT-0280 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G3] bacterium HMT-280 Human host Oral none assigned scarce Subgingival plaque NA HMT-0281 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G3] bacterium HMT-281 Human host Oral none assigned scarce Subgingival plaque NA HMT-0282 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter junii Environmental Environmental Opportunistic Pathogen low Soil or Water NA HMT-0283 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas catoniae Human host Oral none assigned medium Subgingival plaque NA HMT-0284 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas sp. HMT-284 Human host Oral none assigned medium Supragingival plaque NA HMT-0286 Bacteria Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Tannerella serpentiformis Human host Oral none assigned medium Periodontitis NA HMT-0288 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella oulorum Human host Oral none assigned medium Periodontitis NA HMT-0289 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella maculosa Human host Oral none assigned medium Periodontitis NA HMT-0290 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Anaerococcus sp. HMT-290 Human host Nasal Skin high Nasal high HMT-0291 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella denticola Human host Oral none assigned high Periodontitis NA HMT-0294 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Anaerococcus vaginimassiliensis Human host Vaginal none assigned scarce Vaginal NA HMT-0295 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Anaerococcus sp. HMT-295 Human host Skin Nasal medium Skin low HMT-0297 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter johnsonii Environmental Environmental none assigned low Soil or Water NA HMT-0298 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella histicola Human host Oral none assigned high Palatine tonsils NA HMT-0299 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella nanceiensis Human host Oral none assigned high Saliva NA HMT-0300 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella sp. HMT-300 Human host Oral none assigned medium Subgingival plaque NA HMT-0301 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella sp. HMT-301 Human host Oral none assigned low Subgingival plaque NA HMT-0302 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella rava Human host Oral none assigned medium Palatine tonsils NA HMT-0303 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella pleuritidis Human host Oral none assigned medium Subgingival plaque NA HMT-0304 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella sp. HMT-304 Human host Oral none assigned medium Palatine tonsils NA HMT-0305 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella sp. HMT-305 Human host Oral none assigned medium Saliva NA HMT-0306 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella vespertina Human host Oral none assigned medium Throat NA HMT-0307 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella salivae Human host Oral none assigned medium Throat NA HMT-0308 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp. HMT-308 Human host Oral none assigned medium Throat NA HMT-0309 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella sp. HMT-309 Human host Oral none assigned medium Saliva NA HMT-0311 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella oris Human host Oral none assigned medium Periodontitis NA HMT-0312 Bacteria Bacillota Bacilli Lactobacillales Aerococcaceae Aerococcus viridans Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0313 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella jejuni Human host Oral none assigned high Throat NA HMT-0314 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella sp. HMT-314 Human host Oral none assigned medium Palatine tonsils NA HMT-0315 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hallella sp. HMT-315 Human host Oral none assigned low Palatine tonsils NA HMT-0316 Bacteria Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Haematobacter missouriensis Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0317 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella sp. HMT-317 Human host Oral none assigned medium Palatine tonsils NA HMT-0318 Bacteria Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter sp. HMT-318 Environmental Environmental none assigned scarce Soil or Water NA HMT-0319 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium sp. HMT-319 Environmental Environmental none assigned scarce Soil or Water NA HMT-0320 Bacteria Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Flavitalea sp. HMT-320 Environmental Environmental none assigned scarce Soil or Water NA HMT-0321 Bacteria Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter sp. HMT-321 Environmental Environmental none assigned scarce Soil or Water NA HMT-0322 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Riemerella sp. HMT-322 Human host Oral none assigned high Supragingival plaque NA HMT-0325 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga granulosa Human host Oral none assigned medium Supragingival plaque NA HMT-0326 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga periodontitidis Human host Oral none assigned medium Supragingival plaque NA HMT-0327 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseriaceae [G1] bacterium HMT-327 Human host Nasal Skin medium Nasal medium HMT-0328 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium mastitidis Human host Skin none assigned scarce Skin NA HMT-0329 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga leadbetteri Human host Oral none assigned high Supragingival plaque NA HMT-0330 Bacteria Pseudomonadota Oligoflexia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio aeruginosavorus Environmental Environmental none assigned scarce Soil or Water NA HMT-0331 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus auricularis Human host Skin Nasal low Ear low HMT-0332 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga bilenii Human host Oral none assigned medium Supragingival plaque NA HMT-0333 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium massiliense Human host Nasal Skin low Nasal low HMT-0337 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga gingivalis Human host Oral none assigned high Subgingival plaque NA HMT-0338 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp. HMT-338 Human host Oral none assigned medium Subgingival plaque NA HMT-0339 Bacteria Actinomycetota Actinomycetes Micrococcales Intrasporangiaceae Janibacter indicus Environmental Environmental none assigned scarce Soil or Water NA HMT-0340 Bacteria Actinomycetota Actinomycetes Micrococcales Brevibacteriaceae Brevibacterium paucivorans Environmental Environmental Opportunistic Pathogen scarce Food NA HMT-0341 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium coyleae Human host Nasal Skin low Nasal scarce HMT-0342 Bacteria Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Novosphingobium panipatense Environmental Environmental none assigned scarce Soil or Water NA HMT-0343 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter xylosoxidans Environmental Environmental Opportunistic Pathogen medium Soil or Water NA HMT-0344 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas luteola Environmental Environmental Opportunistic Pathogen low Soil or Water NA HMT-0345 Bacteria Patescibacteria Patescibacteria [C1] Absconditabacterales Absconditicoccaceae Absconditicoccaceae [G1] bacterium HMT-345 Human host Oral none assigned medium Saliva NA HMT-0346 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadaceae Saccharimonas sp. HMT-346 Human host Oral none assigned high Periodontitis NA HMT-0347 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadaceae Saccharimonas sp. HMT-347 Human host Oral none assigned medium Subgingival plaque NA HMT-0348 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Parvisynbacteraceae Parvisynbacter sp. HMT-348 Human host Oral none assigned medium Supragingival plaque NA HMT-0349 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadaceae Saccharimonas sp. HMT-349 Human host Oral none assigned high Periodontitis NA HMT-0350 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadales [F1] Saccharimonadales [F1 G1] bacterium HMT-350 Human host Oral none assigned medium Periodontitis NA HMT-0351 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanosyncoccaceae Nanosyncoccus sp. HMT-351 Human host Oral none assigned high Saliva NA HMT-0352 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanosynbacteraceae Nanosynbacter sp. HMT-352 Human host Oral none assigned high Saliva NA HMT-0353 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanosynbacteraceae Nanosynbacter sp. HMT-353 Human host Oral none assigned medium Periodontitis NA HMT-0354 Bacteria Actinomycetota Actinomycetes Micrococcales Dermabacteraceae Dermabacter hominis Human host Nasal Skin low Nasal scarce HMT-0355 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadales [F3] Saccharimonadales [F3 G1] bacterium HMT-355 Human host Oral none assigned low Subgingival plaque NA HMT-0356 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanoperiomorbaceae Nanoperiomorbus periodonticus Human host Oral none assigned high Periodontitis NA HMT-0357 Bacteria Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Pyramidobacter piscolens Human host Oral Gastrointestinal Tract scarce Periodontitis scarce HMT-0358 Bacteria Synergistota Synergistia Synergistales Synergistaceae Fretibacterium sp. HMT-358 Human host Oral none assigned low Subgingival plaque NA HMT-0359 Bacteria Synergistota Synergistia Synergistales Synergistaceae Fretibacterium sp. HMT-359 Human host Oral none assigned low Subgingival plaque NA HMT-0360 Bacteria Synergistota Synergistia Synergistales Synergistaceae Fretibacterium sp. HMT-360 Human host Oral none assigned medium Subgingival plaque NA HMT-0361 Bacteria Synergistota Synergistia Synergistales Synergistaceae Fretibacterium sp. HMT-361 Human host Oral none assigned scarce Subgingival plaque NA HMT-0362 Bacteria Synergistota Synergistia Synergistales Synergistaceae Fretibacterium sp. HMT-362 Human host Oral none assigned low Subgingival plaque NA HMT-0363 Bacteria Synergistota Synergistia Synergistales Synergistaceae Fretibacterium fastidiosum Human host Oral none assigned medium Periodontitis NA HMT-0364 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanosyncoccaceae Nanosyncoccus sp. HMT-364 Human host Oral none assigned medium Saliva NA HMT-0365 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G3] bacterium HMT-365 Human host Oral none assigned low Palatine tonsils NA HMT-0366 Bacteria Bacillota Clostridia Eubacteriales Ruminococcaceae Ruminococcaceae [G3] bacterium HMT-366 Human host Oral none assigned scarce Throat NA HMT-0367 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanosyncoccaceae Nanosyncoccus alces Human host Oral none assigned scarce Saliva NA HMT-0368 Bacteria Actinomycetota Actinomycetes Mycobacteriales Dietziaceae Dietzia cinnamea Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0370 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium sp. HMT-370 Human host Oral none assigned medium Throat NA HMT-0371 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanosyncoccaceae Nanosyncoccus nanoralicus Human host Oral none assigned medium Saliva NA HMT-0373 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Stomatobaculum sp. HMT-373 Human host Oral none assigned scarce Palatine tonsils NA HMT-0374 Bacteria Actinomycetota Actinomycetes Micrococcales Promicromonosporaceae Cellulosimicrobium funkei Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0375 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Urinicoccus timonensis Human host Nasal Skin low Nasal low HMT-0376 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hallella sp. HMT-376 Human host Oral none assigned low Periodontitis NA HMT-0377 Bacteria Bacillota Clostridia Peptostreptococcales Filifactoraceae Peptoanaerobacter yurii subsps. yurii Human host Oral none assigned no data not determined NA HMT-0378 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella micans Human host Oral Nasal low Periodontitis low HMT-0381 Bacteria Bacillota Clostridia Eubacteriales Ruminococcaceae Ruminococcaceae [G3] bacterium HMT-381 Human host no data none assigned scarce Unassigned NA HMT-0382 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovoracaceae [G8] bacterium HMT-382 Human host no data none assigned scarce Unassigned NA HMT-0383 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovoracaceae [G1] bacterium HMT-383 Human host Oral none assigned scarce Unassigned NA HMT-0386 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Anaerosphaera mikwangii Human host Oral none assigned scarce Unassigned NA HMT-0388 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-388 Human host Oral none assigned scarce not determined NA HMT-0389 Bacteria Bacillota Bacilli Lactobacillales Aerococcaceae Abiotrophia defectiva Human host Oral none assigned medium Buccal mucosa NA HMT-0390 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Parvisynbacteraceae Parvisynbacter sp. HMT-390 Human host Oral none assigned low Subgingival plaque NA HMT-0391 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadales [F2] Saccharimonadales [F5 G1] bacterium HMT-391 Human host Oral none assigned low Supragingival plaque NA HMT-0392 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Pseudoleptotrichia sp. HMT-392 Human host Oral none assigned medium Supragingival plaque NA HMT-0393 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Parvimonas sp. HMT-393 Human host Oral none assigned low Subgingival plaque NA HMT-0394 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadaceae Saccharimonas sp. HMT-394 Human host Oral none assigned high Supragingival plaque NA HMT-0396 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella sp. HMT-396 Human host Oral none assigned low Saliva NA HMT-0397 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadaceae Saccharimonas sp. HMT-397 Human host Oral none assigned medium Periodontitis NA HMT-0398 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus oralis subsp. dentisani Human host Oral none assigned high Keratinized gingiva NA HMT-0399 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanogingivalaceae Nanogingivalis sp. HMT-399 Human host Oral none assigned medium Tongue dorsum NA HMT-0400 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanogingivalaceae Nanogingivalis sp. HMT-400 Human host Oral none assigned medium Saliva NA HMT-0401 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanogingivalaceae Nanogingivalis sp. HMT-401 Human host Oral none assigned medium Keratinized gingiva NA HMT-0402 Bacteria Bacillota Clostridia Eubacteriales Clostridiales [F1] Clostridiales [F1 G2] bacterium HMT-402 Human host no data none assigned scarce Unassigned NA HMT-0403 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces sp. HMT-403 Human host Oral none assigned medium Supragingival plaque NA HMT-0404 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia sp. HMT-404 Human host Oral none assigned medium Throat NA HMT-0405 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella negevensis Human host Oral none assigned low Palatine Tonsils NA HMT-0406 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia sp. HMT-406 Human host Oral none assigned medium not determined NA HMT-0407 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Aeriscardovia sp. HMT-407 Human host no data none assigned scarce Unassigned NA HMT-0408 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter sp. HMT-408 Human host Oral none assigned scarce Unassigned NA HMT-0409 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Lautropia dentalis Human host Oral none assigned medium Supragingival plaque NA HMT-0410 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella sp. HMT-410 Human host Oral none assigned medium Throat NA HMT-0411 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus parasanguinis Human host Oral none assigned high Tongue dorsum NA HMT-0413 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp. HMT-413 Human host Oral none assigned high Keratinized gingiva NA HMT-0414 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces sp. HMT-414 Human host Oral none assigned medium Periodontitis NA HMT-0415 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus rubneri Human host Oral none assigned medium Tongue dorsum NA HMT-0416 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Fannyhessea sp. HMT-416 Human host Oral none assigned scarce Periodontitis NA HMT-0417 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp. HMT-417 Human host Oral none assigned high Throat NA HMT-0418 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus parafarraginis Environmental Environmental none assigned scarce Food NA HMT-0419 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Stomatobaculum longum Human host Oral none assigned medium Tongue dorsum NA HMT-0420 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium animalis Human host Oral none assigned high Subgingival plaque NA HMT-0421 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella tobetsuensis Human host Oral none assigned medium Tongue dorsum NA HMT-0422 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium normanense Human host Oral Nasal low Buccal mucosa low HMT-0423 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sp. HMT-423 Human host Oral none assigned no data not determined NA HMT-0424 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus kisonensis Environmental Environmental none assigned low Food NA HMT-0425 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus pseudopneumoniae Human host Oral none assigned high Buccal mucosa NA HMT-0426 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter kilianii Human host Oral none assigned medium Saliva NA HMT-0427 Bacteria Bacillota Bacilli Lactobacillales Aerococcaceae Abiotrophia sp. HMT-427 Human host Oral none assigned medium Buccal mucosa NA HMT-0428 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Catonella massiliensis Human host Oral none assigned medium Throat NA HMT-0429 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium pseudoperiodonticum Human host Oral none assigned high Throat NA HMT-0430 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum sp. HMT-430 Human host Oral none assigned medium Throat NA HMT-0431 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus infantis clade-431 Human host Oral none assigned high Hard palate NA HMT-0432 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema vincentii clade-432 Human host Oral none assigned medium Periodontitis NA HMT-0433 Bacteria Pseudomonadota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter concisus clade-433 Human host Oral none assigned high Throat NA HMT-0434 Bacteria Bacillota Bacilli Caryophanales Gemellaceae Gemella haemolysans clade-434 Human host Oral none assigned high Hard palate NA HMT-0435 Bacteria Bacillota Clostridia Eubacteriales Syntrophomonadaceae Syntrophomonadaceae [G1] bacterium HMT-435 Human host no data none assigned scarce Unassigned NA HMT-0436 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G3] bacterium HMT-436 Human host Oral none assigned scarce not determined NA HMT-0438 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema socranskii subsp. buccale Human host Oral none assigned medium Subgingival plaque NA HMT-0439 Bacteria Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Anaerolineae [G1] bacterium HMT-439 Human host Oral none assigned medium Periodontitis NA HMT-0440 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema socranskii subsp. paredis Human host Oral none assigned medium Subgingival plaque NA HMT-0441 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum sp. HMT-441 Human host Oral none assigned low Supragingival plaque NA HMT-0442 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-442 Human host Oral none assigned scarce Subgingival plaque NA HMT-0443 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella sp. HMT-443 Human host Oral none assigned low not determined NA HMT-0444 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus infantis clade-444 Human host Oral none assigned high Hard palate NA HMT-0445 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium hesseae Human host Nasal Skin low Nasal low HMT-0447 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium simiae Human host Oral none assigned low Subgingival plaque NA HMT-0448 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces sp. HMT-448 Human host Oral none assigned medium Periodontitis NA HMT-0450 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium aurimucosum clade-450 Human host Nasal Skin low Nasal scarce HMT-0451 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Catonella sp. HMT-451 Human host Oral none assigned scarce Subgingival plaque NA HMT-0454 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium macclintockiae Human host Nasal Skin low Nasal scarce HMT-0455 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio sp. HMT-455 Human host Oral none assigned low Throat NA HMT-0456 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus ilei Human host Oral none assigned medium Tongue dorsum NA HMT-0457 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium sinus Human host Oral none assigned medium Throat NA HMT-0458 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp. HMT-458 Human host Oral none assigned medium Supragingival plaque NA HMT-0459 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella sp. HMT-459 Human host Oral none assigned medium Hard palate NA HMT-0460 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum gingivalis Human host Oral Nasal low Tongue dorsum low HMT-0461 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lactobacillus ultunensis Human host Oral Gastrointestinal Tract scarce Dental Caries scarce HMT-0463 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp. HMT-463 Human host Oral none assigned low Subgingival plaque NA HMT-0464 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium watanabei Human host Oral none assigned medium Palatine tonsils NA HMT-0465 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides zoogleoformans Human host Oral none assigned low Periodontitis NA HMT-0466 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella tannerae Human host Oral none assigned high Periodontitis NA HMT-0467 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovoracaceae [G1] sulci Human host Oral none assigned medium Tongue dorsum NA HMT-0468 Bacteria Bacillota Bacilli Caryophanales Bacillaceae Bacillus subtilis Environmental Environmental none assigned scarce Soil or Water NA HMT-0469 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella melaninogenica Human host Oral none assigned high Saliva NA HMT-0470 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp. HMT-470 Human host Oral none assigned medium Supragingival plaque NA HMT-0471 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp. HMT-471 Human host Oral none assigned medium Supragingival plaque NA HMT-0473 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp. HMT-473 Human host Oral none assigned medium Keratinized gingiva NA HMT-0475 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella sp. HMT-475 Human host Oral none assigned low Supragingival plaque NA HMT-0476 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria subflava Human host Oral none assigned high Throat NA HMT-0477 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Stutzerimonas stutzeri Environmental Environmental none assigned scarce Soil or Water NA HMT-0479 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-479 Human host Oral none assigned low Supragingival plaque NA HMT-0481 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-481 Human host Oral none assigned low Supragingival plaque NA HMT-0483 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonadaceae [G1] bacterium HMT-483 Human host Oral none assigned low Supragingival plaque NA HMT-0484 Bacteria Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Erysipelothrix tonsillarum Environmental Environmental none assigned scarce Animal host NA HMT-0485 Bacteria Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Agrobacterium tumefaciens Environmental Environmental none assigned scarce Soil or Water NA HMT-0488 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanosynbacteraceae Nanosynbacter fur Human host Oral none assigned medium Periodontitis NA HMT-0490 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-490 Human host Oral none assigned low Subgingival plaque NA HMT-0493 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovoracaceae [G5] bacterium HMT-493 Human host Oral none assigned scarce not determined NA HMT-0494 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum saburreum Human host Oral none assigned medium Periodontitis NA HMT-0495 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovoracaceae [G3] bacterium HMT-495 Human host Oral none assigned scarce not determined NA HMT-0496 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum sp. HMT-496 Human host Oral none assigned scarce Throat NA HMT-0498 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp. HMT-498 Human host Oral none assigned medium Periodontitis NA HMT-0499 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria sp. HMT-499 Human host Oral none assigned scarce Hard palate NA HMT-0500 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnospiraceae [G8] bacterium HMT-500 Human host Oral none assigned medium Periodontitis NA HMT-0501 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-501 Human host Oral none assigned scarce not determined NA HMT-0503 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G3] bacterium HMT-503 Human host Oral none assigned scarce Palatine tonsils NA HMT-0504 Bacteria Mycoplasmatota Mollicutes Mollicutes [O1] Mollicutes [O1 F1] Mollicutes [O1 F1 G1] bacterium HMT-504 Human host Oral none assigned scarce not determined NA HMT-0505 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G5] bacterium HMT-505 Human host Oral none assigned low Subgingival plaque NA HMT-0507 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G5] bacterium HMT-507 Human host Oral none assigned scarce Palatine tonsils NA HMT-0508 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-508 Human host Oral none assigned low Subgingival plaque NA HMT-0509 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G4] bacterium HMT-509 Human host no data none assigned scarce Unassigned NA HMT-0511 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G5] bacterium HMT-511 Human host Oral none assigned medium Subgingival plaque NA HMT-0513 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp. HMT-513 Human host Oral none assigned medium Keratinized gingiva NA HMT-0515 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hallella sp. HMT-515 Human host Oral none assigned scarce Subgingival plaque NA HMT-0516 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacter sp. HMT-516 Human host Oral none assigned scarce Palatine tonsils NA HMT-0517 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-517 Human host Oral none assigned low Subgingival plaque NA HMT-0518 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-518 Human host Oral none assigned scarce Subgingival plaque NA HMT-0521 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Mitsuokella sp. HMT-521 Human host Oral none assigned medium Palatine tonsils NA HMT-0523 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria sp. HMT-523 Human host Oral none assigned scarce not determined NA HMT-0524 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella atypica Human host Oral none assigned high Throat NA HMT-0525 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces sp. HMT-525 Human host Oral none assigned low Subgingival plaque NA HMT-0526 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella koreensis Human host Oral none assigned medium Periodontitis NA HMT-0529 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lactobacillus acidophilus Environmental Environmental Gastrointestinal Tract scarce Food scarce HMT-0530 Bacteria Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium acnes Human host Skin Nasal high Skin high HMT-0531 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter actinomycetemcomitans Human host Oral none assigned low Periodontitis NA HMT-0534 Bacteria Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella adiacens Human host Oral none assigned medium Tongue dorsum NA HMT-0535 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus aegyptius Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0536 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas aeruginosa Environmental Environmental none assigned scarce Opportunistic Pathogen NA HMT-0537 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus agalactiae Human host Vaginal Opportunistic Pathogen scarce Vaginal NA HMT-0538 Bacteria Bacillota Clostridia Eubacteriales Eubacteriaceae Pseudoramibacter alactolyticus Human host Oral none assigned medium Periodontitis NA HMT-0539 Bacteria Bacillota Clostridia Peptostreptococcales Filifactoraceae Filifactor alocis Human host Oral none assigned medium Periodontitis NA HMT-0540 Bacteria Pseudomonadota Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae Cardiobacterium valvarum Human host Oral none assigned medium Subgingival plaque NA HMT-0541 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema amylovorum Human host Oral none assigned low Subgingival plaque NA HMT-0542 Bacteria Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Peptostreptococcus anaerobius Human host Vaginal Oral scarce Vaginal scarce HMT-0543 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus anginosus Human host Oral none assigned medium Periodontitis NA HMT-0544 Bacteria Pseudomonadota Alphaproteobacteria Hyphomicrobiales Brucellaceae Brucella anthropi Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0545 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter aphrophilus Human host Oral none assigned medium Supragingival plaque NA HMT-0547 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas asaccharolytica Human host Vaginal Gastrointestinal Tract low Vaginal low HMT-0548 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Peptoniphilus asaccharolyticus Human host Gastrointestinal Tract Vaginal low Stool scarce HMT-0550 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus aureus Human host Nasal none assigned high Nasal NA HMT-0552 Bacteria Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium avidum Human host Skin Nasal medium Skin medium HMT-0553 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella baroniae Human host Oral none assigned low Periodontitis NA HMT-0554 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter baumannii Environmental Environmental none assigned scarce Opportunistic Pathogen NA HMT-0555 Bacteria Bacillota Bacilli Caryophanales Gemellaceae Gemella bergeri Human host Oral none assigned scarce Buccal mucosa NA HMT-0556 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella bivia Human host Vaginal Oral low Vaginal low HMT-0557 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Gallibacter brachus Human host Oral none assigned medium Subgingival plaque NA HMT-0558 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Levilactobacillus brevis Environmental Environmental none assigned scarce Food NA HMT-0559 Bacteria Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia broomeae Environmental Environmental Opportunistic Pathogen scarce not determined NA HMT-0560 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella buccae Human host Oral none assigned low Periodontitis NA HMT-0561 Bacteria Mycoplasmatota Mollicutes Mycoplasmoidales Metamycoplasmataceae Metamycoplasma buccale Human host Oral none assigned scarce not determined NA HMT-0562 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella buccalis Human host Vaginal Oral medium Vaginal low HMT-0563 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia buccalis Human host Oral none assigned medium Periodontitis NA HMT-0565 Bacteria Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter cancerogenus Environmental Environmental Opportunistic Pathogen medium Soil or Water NA HMT-0567 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus caprae Human host Skin Nasal low Skin low HMT-0568 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus casei Environmental Environmental none assigned scarce Food NA HMT-0569 Bacteria Bacillota Erysipelotrichia Erysipelotrichales Coprobacillaceae Eggerthia catenaformis Human host Oral none assigned medium Periodontitis NA HMT-0571 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia cepacia Environmental Environmental Opportunistic Pathogen low Soil or Water NA HMT-0572 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella veroralis Human host Oral none assigned medium Palatine tonsils NA HMT-0574 Bacteria Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia coli Human host Gastrointestinal Tract Nasal medium Gastrointestinal tract medium HMT-0575 Bacteria Pseudomonadota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter concisus clade-575 Human host Oral none assigned medium Throat NA HMT-0576 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus constellatus Human host Oral none assigned medium Palatine tonsils NA HMT-0577 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella corrodens Human host Oral none assigned medium Subgingival plaque NA HMT-0578 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus cristatus Human host Oral none assigned medium Supragingival plaque NA HMT-0579 Bacteria Actinomycetota Coriobacteriia Eggerthellales Eggerthellaceae Cryptobacterium curtum Human host Oral none assigned scarce Periodontitis_and_Dental_caries NA HMT-0580 Bacteria Pseudomonadota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter curvus Human host Oral none assigned low Periodontitis NA HMT-0582 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella denitrificans Human host Oral none assigned medium Supragingival plaque NA HMT-0583 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hallella dentalis Human host Oral none assigned medium Periodontitis NA HMT-0584 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema denticola Human host Oral none assigned high Periodontitis NA HMT-0586 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Parascardovia denticolens Human host Oral none assigned low Periodontitis NA HMT-0587 Bacteria Actinomycetota Actinomycetes Micrococcales Micrococcaceae Rothia dentocariosa Human host Oral none assigned high Supragingival plaque NA HMT-0588 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium dentium Human host Oral Gastrointestinal Tract scarce Dental Caries scarce HMT-0590 Bacteria Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas diminuta Environmental Environmental Opportunistic Pathogen low Soil or Water NA HMT-0591 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium diphtheriae Pathogen Pathogen none assigned low Frank pathogen NA HMT-0593 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Mogibacterium diversum Human host Oral none assigned medium Throat NA HMT-0594 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus downei Human host Oral none assigned scarce Buccal mucosa NA HMT-0595 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium durum Human host Oral none assigned high Supragingival plaque NA HMT-0596 Bacteria Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella elegans Human host Oral none assigned high Keratinized gingiva NA HMT-0597 Bacteria Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium elkanii Environmental Environmental none assigned low Soil or Water NA HMT-0598 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria elongata Human host Oral none assigned high Supragingival plaque NA HMT-0600 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella enoeca Human host Oral none assigned medium Periodontitis NA HMT-0601 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus epidermidis Human host Skin Nasal high Skin high HMT-0602 Bacteria Actinomycetota Coriobacteriia Eggerthellales Eggerthellaceae Slackia exigua Human host Oral none assigned low Periodontitis NA HMT-0603 Bacteria Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Bulleidia extructa Human host Oral none assigned medium Palatine tonsils NA HMT-0604 Bacteria Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus faecalis Human host Gastrointestinal Tract Opportunistic Pathogen scarce Gastrointestinal tract NA HMT-0605 Bacteria Pseudomonadota Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae Desulfovibrio fairfieldensis Human host Oral Gastrointestinal Tract low Periodontitis low HMT-0606 Bacteria Mycoplasmatota Mollicutes Mycoplasmoidales Metamycoplasmataceae Metamycoplasma faucium Human host Oral none assigned low Palatine tonsils NA HMT-0607 Bacteria Mycoplasmatota Mollicutes Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis fermentans Human host Oral none assigned scarce not determined NA HMT-0608 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus fermentum Human host Oral Environmental low Dental Caries scarce HMT-0609 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria flava Human host Oral none assigned medium Supragingival plaque NA HMT-0610 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria flavescens Human host Oral none assigned high Throat NA HMT-0612 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas fluorescens Environmental Environmental Oral scarce Soil or Water scarce HMT-0613 Bacteria Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Tannerella forsythia Human host Oral none assigned high Periodontitis NA HMT-0614 Bacteria Bacillota Bacilli Caryophanales Caryophanaceae Lysinibacillus fusiformis Environmental Environmental none assigned scarce Soil or Water NA HMT-0615 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lactobacillus gasseri Human host Vaginal none assigned high Vaginal NA HMT-0616 Bacteria Mycoplasmatota Mollicutes Mycoplasmoidales Mycoplasmoidaceae Mycoplasmoides genitalium Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0617 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia georgiae Human host Oral none assigned medium Subgingival plaque NA HMT-0618 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces gerencseriae Human host Oral none assigned high Periodontitis NA HMT-0619 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas gingivalis Human host Oral none assigned high Periodontitis NA HMT-0621 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria gonorrhoeae Pathogen Pathogen none assigned low Frank pathogen NA HMT-0622 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus gordonii Human host Oral none assigned medium Supragingival plaque NA HMT-0623 Bacteria Pseudomonadota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter gracilis Human host Oral none assigned medium Subgingival plaque NA HMT-0626 Bacteria Bacillota Bacilli Caryophanales Gemellaceae Gemella haemolysans clade-626 Human host Oral none assigned high Hard palate NA HMT-0627 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga haemolytica Human host Oral none assigned low Periodontitis NA HMT-0630 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides heparinolyticus Human host Oral none assigned low Periodontitis NA HMT-0632 Bacteria Mycoplasmatota Mollicutes Mycoplasmoidales Metamycoplasmataceae Metamycoplasma hominis Human host Vaginal none assigned low Vaginal NA HMT-0633 Bacteria Pseudomonadota Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae Cardiobacterium hominis Human host Oral none assigned high Subgingival plaque NA HMT-0634 Bacteria Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter hormaechei Human host Nasal Gastrointestinal Tract low Nasal scarce HMT-0635 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Johnsonella ignava Human host Oral none assigned low Subgingival plaque NA HMT-0638 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus infantis clade-638 Human host Oral none assigned high Hard palate NA HMT-0639 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas infelix Human host Oral none assigned medium Periodontitis NA HMT-0641 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus influenzae Human host Nasal Opportunistic Pathogen scarce Nasal NA HMT-0642 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Scardovia inopinata Human host Oral none assigned scarce Periodontitis NA HMT-0643 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella intermedia Human host Oral none assigned high Palatine tonsils NA HMT-0644 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus intermedius Human host Oral none assigned medium Subgingival plaque NA HMT-0645 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces israelii Human host Oral none assigned high Periodontitis NA HMT-0646 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella kingae Human host Oral Opportunistic Pathogen scarce Tongue dorsum NA HMT-0649 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria lactamica Human host Oral Skin low Tongue dorsum low HMT-0653 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema lecithinolyticum Human host Oral none assigned medium Subgingival plaque NA HMT-0654 Bacteria Actinomycetota Coriobacteriia Eggerthellales Eggerthellaceae Eggerthella lenta Human host Gastrointestinal Tract none assigned low Stool NA HMT-0655 Bacteria Bacillota Clostridia Eubacteriales Eubacteriaceae Eubacterium limosum Human host Gastrointestinal Tract none assigned low Stool NA HMT-0656 Bacteria Mycoplasmatota Mollicutes Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis lipophila Human host Oral none assigned scarce Palatine tonsils NA HMT-0658 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella loescheii Human host Oral none assigned medium Subgingival plaque NA HMT-0659 Bacteria Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium japonicum Environmental Environmental none assigned scarce Soil or Water NA HMT-0660 Bacteria Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Aquamicrobium lusatiense Environmental Environmental none assigned scarce Soil or Water NA HMT-0662 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Finegoldia magna Human host Skin Nasal medium Skin medium HMT-0663 Bacteria Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas maltophilia Human host Vaginal Skin low Vaginal scarce HMT-0664 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema maltophilum Human host Oral none assigned medium Periodontitis NA HMT-0665 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella marshii Human host Oral none assigned low Periodontitis NA HMT-0666 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium matruchotii Human host Oral none assigned high Supragingival plaque NA HMT-0667 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema medium Human host Oral none assigned medium Periodontitis NA HMT-0669 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria meningitidis Human host Oral none assigned low Throat NA HMT-0671 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia meyeri Human host Oral none assigned low Periodontitis NA HMT-0673 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Hornefia minuta Human host Oral none assigned low Periodontitis NA HMT-0674 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Atopobium minutum Human host Oral Opportunistic Pathogen scarce not determined NA HMT-0676 Bacteria Pseudomonadota Gammaproteobacteria Enterobacterales Morganellaceae Proteus mirabilis Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0677 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus mitis Human host Oral none assigned high Keratinized gingiva NA HMT-0678 Bacteria Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Solobacterium moorei Human host Oral none assigned medium Throat NA HMT-0681 Bacteria Actinomycetota Actinomycetes Micrococcales Micrococcaceae Rothia mucilaginosa clade-681 Human host Oral none assigned high Hard palate NA HMT-0682 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria mucosa Human host Oral none assigned medium Supragingival plaque NA HMT-0683 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Simonsiella muelleri Human host Oral none assigned high Hard palate NA HMT-0684 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Mitsuokella multacida Human host Gastrointestinal Tract none assigned scarce Gastrointestinal tract NA HMT-0685 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella multiformis Human host Oral none assigned medium Periodontitis NA HMT-0686 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus mutans Human host Oral none assigned medium Subgingival plaque NA HMT-0688 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces viscosus Human host Oral none assigned low Supragingival plaque NA HMT-0689 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium naviforme Human host no data none assigned scarce Unassigned NA HMT-0690 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium necrophorum Human host Oral none assigned scarce Palatine tonsils NA HMT-0691 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Mogibacterium neglectum Human host Oral none assigned low Subgingival plaque NA HMT-0692 Bacteria Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycolicibacterium neoaurum Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0693 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella nigrescens Human host Oral none assigned high Periodontitis NA HMT-0694 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Hornefia nodatum Human host Oral none assigned medium Periodontitis NA HMT-0698 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium nucleatum_sensu_stricto Human host Oral none assigned medium Subgingival plaque NA HMT-0700 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga ochracea Human host Oral none assigned medium Subgingival plaque NA HMT-0701 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia odontolytica Human host Oral none assigned high Tongue dorsum NA HMT-0703 Bacteria Pseudomonadota Deltaproteobacteria Desulfovibrionales Desulfomicrobiaceae Desulfomicrobium orale Human host Oral none assigned medium Periodontitis NA HMT-0704 Bacteria Mycoplasmatota Mollicutes Mycoplasmoidales Metamycoplasmataceae Metamycoplasma orale Human host Oral none assigned low Saliva NA HMT-0705 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella oralis Human host Oral none assigned medium Periodontitis NA HMT-0706 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella oralis Human host Oral none assigned high Supragingival plaque NA HMT-0707 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus oralis subsp. oralis Human host Oral none assigned high Buccal mucosa NA HMT-0708 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces oricola Human host Oral none assigned low Periodontitis NA HMT-0709 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus oris Human host Oral none assigned scarce Saliva NA HMT-0710 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia dentiphila Human host Oral none assigned medium Tongue dorsum NA HMT-0711 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Moraxella osloensis Human host Nasal Skin low Nasal low HMT-0714 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella pallens Human host Oral none assigned high Throat NA HMT-0716 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus paracasei Environmental Environmental none assigned scarce Food NA HMT-0717 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Variovorax paradoxus Environmental Environmental none assigned scarce Soil or Water NA HMT-0718 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus parainfluenzae Human host Oral Nasal high Buccal mucosa medium HMT-0723 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Lancefieldella parvula Human host Oral none assigned medium Tongue dorsum NA HMT-0724 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema parvum Human host Oral none assigned low Periodontitis NA HMT-0725 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema pectinovorum Human host Oral none assigned scarce Periodontitis NA HMT-0726 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Centipeda periodontii Human host Oral none assigned medium Periodontitis NA HMT-0728 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus peroris Human host Oral none assigned medium Hard palate NA HMT-0731 Bacteria Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella pneumoniae Human host Nasal none assigned medium Nasal NA HMT-0732 Bacteria Mycoplasmatota Mollicutes Mycoplasmoidales Mycoplasmoidaceae Mycoplasmoides pneumoniae Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0733 Bacteria Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia pneumoniae Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0734 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus pneumoniae Human host Nasal Oral medium Nasal low HMT-0736 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Dialister pneumosintes Human host Oral none assigned medium Subgingival plaque NA HMT-0737 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria polysaccharea Human host Oral none assigned medium Keratinized gingiva NA HMT-0738 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Anaerococcus prevotii Human host Nasal Skin low Nasal low HMT-0739 Bacteria Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Arachnia propionica Human host Oral none assigned medium Periodontitis NA HMT-0740 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas oleovorans Environmental Environmental none assigned scarce Soil or Water NA HMT-0742 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Mogibacterium pumilum Human host Oral none assigned low Periodontitis NA HMT-0743 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema putidum Human host Oral none assigned medium Periodontitis NA HMT-0745 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus pyogenes Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0746 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces radicidentis Human host Oral none assigned scarce Unassigned NA HMT-0747 Bacteria Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Erythrobacter ramosus Environmental Environmental none assigned scarce Soil or Water NA HMT-0748 Bacteria Pseudomonadota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter rectus Human host Oral none assigned medium Periodontitis NA HMT-0749 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus rhamnosus Environmental Environmental Gastrointestinal Tract scarce Food scarce HMT-0750 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Lancefieldella rimae Human host Oral none assigned medium Periodontitis NA HMT-0753 Bacteria Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Cronobacter sakazakii Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0754 Bacteria Mycoplasmatota Mollicutes Mycoplasmoidales Metamycoplasmataceae Metamycoplasma salivarium Human host Oral none assigned medium Subgingival plaque NA HMT-0755 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus salivarius Human host Oral none assigned high Tongue dorsum NA HMT-0756 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus salivarius Human host Oral Gastrointestinal Tract medium Periodontitis scarce HMT-0757 Bacteria Bacillota Bacilli Caryophanales Gemellaceae Gemella sanguinis Human host Oral none assigned medium Tongue dorsum NA HMT-0758 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sanguinis Human host Oral none assigned high Supragingival plaque NA HMT-0759 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovoracaceae [G5] saphenum Human host Oral none assigned medium Periodontitis NA HMT-0762 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter segnis Human host Oral none assigned medium Supragingival plaque NA HMT-0763 Bacteria Pseudomonadota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter showae Human host Oral none assigned medium Supragingival plaque NA HMT-0764 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria sicca Human host Oral none assigned high Supragingival plaque NA HMT-0767 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sinensis Human host Oral none assigned low Supragingival plaque NA HMT-0768 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus sobrinus Human host Oral none assigned scarce Buccal mucosa NA HMT-0769 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema socranskii subsp. socranskii Human host Oral none assigned medium Periodontitis NA HMT-0775 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sputigena Human host Oral none assigned high Supragingival plaque NA HMT-0776 Bacteria Pseudomonadota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter sputorum Environmental Environmental none assigned scarce Animal host NA HMT-0777 Bacteria Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Jonquetella anthropi Human host Oral Opportunistic Pathogen scarce Subgingival plaque NA HMT-0779 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella sp. HMT-779 Human host Oral none assigned high Keratinized gingiva NA HMT-0780 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella sp. HMT-780 Human host Oral none assigned high Keratinized gingiva NA HMT-0781 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella saccharolytica Human host Oral none assigned medium Subgingival plaque NA HMT-0782 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella fusca Human host Oral none assigned low Throat NA HMT-0783 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium kefirresidentii Human host Nasal Skin high Nasal high HMT-0784 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Peptoniphilus lacydonensis Human host Nasal Skin medium Nasal medium HMT-0785 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas uenonis Human host Vaginal none assigned medium Vaginal NA HMT-0786 Bacteria Bacillota Bacilli Caryophanales Paenibacillaceae Paenibacillus phoenicis Environmental Environmental none assigned scarce Soil or Water NA HMT-0787 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides pyogenes Environmental Environmental Opportunistic Pathogen scarce Animal host NA HMT-0788 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Anaerococcus tetradius Human host Vaginal none assigned low Vaginal NA HMT-0789 Bacteria Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus saccharolyticus Human host Skin none assigned medium Skin NA HMT-0790 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Peptoniphilaceae [G2] bacterium HMT-790 Human host Oral none assigned scarce Buccal mucosa NA HMT-0791 Bacteria Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium namnetense Human host Skin Nasal high Skin medium HMT-0792 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Anaerococcus nagyae Human host Skin none assigned high Skin NA HMT-0794 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hallella multisaccharivorax Human host Oral none assigned low Dental Caries NA HMT-0795 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella shahii Human host Oral none assigned medium Throat NA HMT-0796 Bacteria Bacillota Clostridia Peptostreptococcales Filifactoraceae Peptoanaerobacter margaretiae Human host Oral none assigned medium Subgingival plaque NA HMT-0797 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella amnii Human host Vaginal none assigned medium Vaginal NA HMT-0798 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella timonensis Human host Vaginal none assigned medium Vaginal NA HMT-0799 Bacteria Mycoplasmatota Mollicutes Mycoplasmoidales Mycoplasmoidaceae Ureaplasma parvum Human host Vaginal none assigned medium Vaginal NA HMT-0801 Bacteria Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus casseliflavus Human host Gastrointestinal Tract Opportunistic Pathogen scarce Gastrointestinal tract NA HMT-0802 Bacteria Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus saccharolyticus Environmental Environmental none assigned scarce Soil or Water NA HMT-0803 Bacteria Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus italicus Environmental Environmental none assigned scarce Food NA HMT-0804 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Lactococcus lactis Environmental Environmental none assigned low Food NA HMT-0805 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema pallidum Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0806 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Olsenella profusa Human host Oral none assigned scarce not determined NA HMT-0807 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Olsenella sp. HMT-807 Human host Oral none assigned medium Periodontitis NA HMT-0808 Bacteria Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Tannerella sp. HMT-808 Human host Oral none assigned medium Subgingival plaque NA HMT-0809 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Olsenella phocaeensis Human host Oral Gastrointestinal Tract scarce Supragingival plaque scarce HMT-0810 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Olegusella sp. HMT-810 Human host Vaginal none assigned scarce Vaginal NA HMT-0811 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Arcanobacterium haemolyticum Pathogen Pathogen none assigned scarce Opportunistic Pathogen NA HMT-0812 Bacteria Pseudomonadota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter pylori Human host Gastrointestinal Tract Oral_and_Nasal not determined Stomach scarce HMT-0813 Bacteria Bacillota Bacilli Lactobacillales Carnobacteriaceae Dolosigranulum pigrum Human host Nasal none assigned high Nasal NA HMT-0814 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Fannyhessea vaginae Human host Vaginal none assigned high Vaginal NA HMT-0815 Archaea Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter oralis Human host Oral none assigned low Periodontitis NA HMT-0816 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus coleohominis Human host Vaginal none assigned low Vaginal NA HMT-0817 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lactobacillus crispatus Human host Vaginal none assigned high Vaginal NA HMT-0818 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus reuteri Human host Gastrointestinal Tract Environmental scarce Gastrointestinal tract scarce HMT-0819 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lactobacillus johnsonii Human host Gastrointestinal Tract none assigned scarce Gastrointestinal tract NA HMT-0820 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella illustrans Human host Oral none assigned low Periodontitis NA HMT-0821 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus ducreyi Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0822 Bacteria Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium tuberculosis Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0823 Bacteria Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium leprae Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0824 Bacteria Bacillota Bacilli Caryophanales Bacillaceae Bacillus anthracis Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0825 Bacteria Bacillota Bacilli Caryophanales Listeriaceae Listeria monocytogenes Environmental Environmental none assigned scarce Soil or Water NA HMT-0827 Bacteria Pseudomonadota Gammaproteobacteria Enterobacterales Yersiniaceae Yersinia pestis Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0828 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella pertussis Pathogen Pathogen none assigned scarce Frank pathogen NA HMT-0829 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Gardnerella vaginalis Human host Vaginal none assigned high Vaginal NA HMT-0830 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Mobiluncus mulieris Human host Vaginal none assigned scarce Vaginal NA HMT-0831 Bacteria Bacillota Bacilli Lactobacillales Carnobacteriaceae Alloiococcus otitis Human host Skin Nasal scarce Ear scarce HMT-0832 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium otitidis Human host Skin Nasal low Ear low HMT-0833 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Moraxellaceae Moraxella catarrhalis Human host Nasal Oral medium Nasal scarce HMT-0834 Bacteria Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas otitidis Human host Skin none assigned scarce Ear NA HMT-0835 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium mucifaciens Human host Skin none assigned scarce Skin NA HMT-0836 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Peptoniphilus lacrimalis Human host Vaginal Nasal low Vaginal low HMT-0837 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Sneathia sanguinegens Human host Vaginal none assigned medium Vaginal NA HMT-0838 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lactobacillus iners Human host Vaginal none assigned high Vaginal NA HMT-0839 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lactobacillus jensenii Human host Vaginal none assigned high Vaginal NA HMT-0840 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Peptoniphilus indolicus Human host Oral Opportunistic Pathogen scarce Subgingival plaque NA HMT-0841 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera lornae Human host Vaginal none assigned medium Vaginal NA HMT-0842 Bacteria Pseudomonadota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter ureolyticus Human host Skin none assigned medium Skin NA HMT-0843 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Dialister micraerophilus Human host Vaginal Oral medium Vaginal low HMT-0844 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Sneathia vaginalis Human host Vaginal none assigned medium Vaginal NA HMT-0845 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Pseudoleptotrichia goodfellowii Human host Oral none assigned medium Subgingival plaque NA HMT-0846 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Gardnerella piotii Human host Vaginal none assigned high Vaginal NA HMT-0847 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp. HMT-847 Human host Oral none assigned medium Throat NA HMT-0848 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Peptidiphaga gingivicola Human host Oral none assigned medium Periodontitis NA HMT-0849 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces johnsonii Human host Oral none assigned medium Subgingival plaque NA HMT-0850 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Schaalia cardiffensis Human host Oral none assigned low Periodontitis NA HMT-0851 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus haemolyticus Human host Oral none assigned high Keratinized gingiva NA HMT-0852 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces massiliensis Human host Oral none assigned high Supragingival plaque NA HMT-0853 Bacteria Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium urealyticum Human host Nasal Skin low Nasal scarce HMT-0854 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia pickettii Human host Oral none assigned scarce not determined NA HMT-0855 Bacteria Actinomycetota Actinomycetes Micrococcales Kytococcaceae Kytococcus sedentarius Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0856 Bacteria Actinomycetota Actinomycetes Micrococcales Jonesiaceae Sanguibacter keddieii Environmental Environmental none assigned scarce Animal host NA HMT-0857 Bacteria Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Rhodobacter capsulatus Environmental Environmental none assigned scarce Soil or Water NA HMT-0858 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Comamonas testosteroni Environmental Environmental Opportunistic Pathogen scarce Soil or Water NA HMT-0859 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Anaerococcus lactolyticus Human host Vaginal none assigned scarce Vaginal NA HMT-0860 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium gonidiaformans Human host Gastrointestinal Tract Oral scarce Gastrointestinal tract scarce HMT-0861 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus plantarum Environmental Environmental none assigned scarce Food NA HMT-0862 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium longum Human host Gastrointestinal Tract Vaginal medium Stool low HMT-0863 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp. HMT-863 Human host Oral none assigned medium Supragingival plaque NA HMT-0865 Bacteria Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Kluyvera ascorbata Human host Nasal Opportunistic Pathogen low Nasal NA HMT-0866 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces graevenitzii Human host Oral none assigned high Tongue dorsum NA HMT-0867 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Gardnerella leopoldii Human host Vaginal none assigned high Vaginal NA HMT-0868 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Gardnerella swidsinskii Human host Vaginal none assigned high Vaginal NA HMT-0869 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadaceae Saccharimonas sp. HMT-869 Human host Oral none assigned medium Subgingival plaque NA HMT-0870 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanogingivalaceae Nanogingivalis gingivitcus Human host Oral none assigned medium Keratinized gingiva NA HMT-0871 Bacteria Patescibacteria Patescibacteria [C1] Patescibacteria [C1 O1] Patescibacteria [C1 O1 F1] Patescibacteria [C1 O1 F1 G1] bacterium HMT-871 Human host Oral none assigned low Supragingival plaque NA HMT-0872 Bacteria Patescibacteria Patescibacteria [C1] Patescibacteria [C1 O1] Patescibacteria [C1 O1 F1] Patescibacteria [C1 O1 F1 G1] bacterium HMT-872 Human host Oral none assigned medium Supragingival plaque NA HMT-0873 Bacteria Patescibacteria Patescibacteria [C1] Patescibacteria [C1 O1] Patescibacteria [C1 O1 F1] Patescibacteria [C1 O1 F1 G2] bacterium HMT-873 Human host Oral none assigned medium Subgingival plaque NA HMT-0874 Bacteria Patescibacteria Patescibacteria [C1] Absconditabacterales Absconditicoccaceae Absconditicoccaceae [G1] bacterium HMT-874 Human host Oral none assigned medium Throat NA HMT-0875 Bacteria Patescibacteria Patescibacteria [C1] Absconditabacterales Absconditicoccaceae Absconditicoccaceae [G1] bacterium HMT-875 Human host Oral none assigned medium Saliva NA HMT-0876 Bacteria Bacillota Clostridia Eubacteriales Clostridiales [F3] Clostridiales [F3 G1] bacterium HMT-876 Human host Oral none assigned scarce not determined NA HMT-0878 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp. HMT-878 Human host Oral none assigned medium Supragingival plaque NA HMT-0879 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp. HMT-879 Human host Oral none assigned medium Subgingival plaque NA HMT-0880 Bacteria Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus durans Environmental Environmental Opportunistic Pathogen scarce Food NA HMT-0881 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus buchneri Environmental Environmental none assigned scarce Food NA HMT-0882 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus panis Environmental Environmental none assigned scarce Food NA HMT-0883 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus pentosus Environmental Environmental none assigned scarce Food NA HMT-0884 Bacteria Bacillota Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus rapi Environmental Environmental none assigned scarce Food NA HMT-0885 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella scopos Human host Oral none assigned medium Throat NA HMT-0887 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella denticariosi Human host Oral none assigned low Subgingival plaque NA HMT-0888 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces dentalis Human host Oral none assigned high Periodontitis NA HMT-0889 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium breve Human host Vaginal none assigned medium Vaginal NA HMT-0890 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium subtile Environmental Environmental none assigned scarce Soil or Water NA HMT-0891 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium scardovii Human host Vaginal none assigned medium Vaginal NA HMT-0892 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-892 Human host Oral none assigned low Periodontitis NA HMT-0893 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces oris clade-893 Human host Oral none assigned high Supragingival plaque NA HMT-0894 Bacteria Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Ottowia sp. HMT-894 Human host Oral none assigned medium Periodontitis NA HMT-0895 Bacteria Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium animalis Environmental Environmental Gastrointestinal Tract scarce Food scarce HMT-0896 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces sp. HMT-896 Human host Oral none assigned low Supragingival plaque NA HMT-0897 Bacteria Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces sp. HMT-897 Human host Oral none assigned medium Periodontitis NA HMT-0898 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp. HMT-898 Human host Oral none assigned low Unassigned NA HMT-0899 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G3] bacterium HMT-899 Human host no data none assigned scarce Unassigned NA HMT-0900 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Weeksellaceae [G1] bacterium HMT-900 Human host Oral none assigned medium Supragingival plaque NA HMT-0901 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga sp. HMT-901 Human host Oral none assigned scarce Supragingival plaque NA HMT-0904 Bacteria Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Erysipelotrichaceae [G1] bacterium HMT-904 Human host Oral none assigned scarce Palatine tonsils NA HMT-0905 Bacteria Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Erysipelotrichaceae [G1] bacterium HMT-905 Human host Oral none assigned low Subgingival plaque NA HMT-0906 Bacteria Mycoplasmatota Mollicutes Mollicutes [O2] Mollicutes [O2 F2] Mollicutes [O2 F2 G2] bacterium HMT-906 Human host Oral none assigned scarce Palatine tonsils NA HMT-0907 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Weeksellaceae [G1] bacterium HMT-907 Human host Oral none assigned scarce Supragingival plaque NA HMT-0909 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia sp. HMT-909 Human host Oral none assigned low Supragingival plaque NA HMT-0910 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Stomatobaculum sp. HMT-910 Human host Oral none assigned low Subgingival plaque NA HMT-0911 Bacteria Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacteraceae [G7] bacterium HMT-911 Human host Oral none assigned scarce not determined NA HMT-0912 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp. HMT-912 Human host Oral none assigned low Palatine tonsils NA HMT-0913 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp. HMT-913 Human host Oral none assigned low Unassigned NA HMT-0914 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp. HMT-914 Human host Oral none assigned medium Unassigned NA HMT-0915 Bacteria Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Propionibacteriaceae [G1] bacterium HMT-915 Human host Oral none assigned scarce Subgingival plaque NA HMT-0916 Bacteria Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Tannerella sp. HMT-916 Human host Oral none assigned scarce Supragingival plaque NA HMT-0917 Bacteria Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella sp. HMT-917 Human host Oral none assigned low Throat NA HMT-0918 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonadaceae [G1] bacterium HMT-918 Human host Oral none assigned scarce Subgingival plaque NA HMT-0919 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-919 Human host Oral none assigned scarce Subgingival plaque NA HMT-0920 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-920 Human host Oral none assigned medium Periodontitis NA HMT-0921 Bacteria Bacillota Bacilli Caryophanales Paenibacillaceae Paenibacillus glucanolyticus Environmental Environmental none assigned scarce Soil or Water NA HMT-0922 Bacteria Bacillota Clostridia Peptostreptococcales Filifactoraceae Peptoanaerobacter sp. HMT-922 Human host Oral none assigned low Palatine tonsils NA HMT-0924 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnocurva vaginae Human host Vaginal none assigned high Vaginal NA HMT-0927 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-927 Human host Oral none assigned scarce Subgingival plaque NA HMT-0928 Bacteria Bacillota Bacilli Caryophanales Gemellaceae Gemella massiliensis Human host Oral none assigned scarce not determined NA HMT-0929 Bacteria Bacillota Clostridia Tissierellales Peptoniphilaceae Fenollaria massiliensis Human host Gastrointestinal Tract Nasal low Gastrointestinal tract low HMT-0930 Bacteria Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas sp. HMT-930 Human host Oral none assigned high Attached keratinized gingiva NA HMT-0931 Bacteria Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Weeksellaceae [G1] bacterium HMT-931 Human host Oral none assigned medium Keratinized gingiva NA HMT-0932 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella sp. HMT-932 Human host Oral none assigned low Hard palate NA HMT-0933 Bacteria Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter sp. HMT-933 Environmental Environmental none assigned scarce Soil or Water NA HMT-0934 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium parvum Human host Oral none assigned medium Throat NA HMT-0935 Bacteria Bacillota Clostridia Eubacteriales Oscillospiraceae Fastidiosipila sanguinis Human host Oral Opportunistic Pathogen scarce Saliva NA HMT-0936 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-936 Human host Oral none assigned scarce not determined NA HMT-0937 Bacteria Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas sp. HMT-937 Human host Oral none assigned scarce Supragingival plaque NA HMT-0939 Bacteria Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Olsenella sp. HMT-939 Human host Oral none assigned scarce Subgingival plaque NA HMT-0942 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella sp. HMT-942 Human host Oral none assigned medium Keratinized gingiva NA HMT-0943 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella aurantiaca Human host Oral none assigned medium Tongue dorsum NA HMT-0944 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus sputorum Human host Oral none assigned medium Saliva NA HMT-0945 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus parahaemolyticus Human host Oral none assigned medium Buccal mucosa NA HMT-0946 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus pittmaniae Human host Oral none assigned medium Palatine tonsils NA HMT-0948 Bacteria Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus lactarius Human host Oral none assigned low Tongue dorsum NA HMT-0949 Bacteria Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp. HMT-949 Human host Oral none assigned low Supragingival plaque NA HMT-0950 Bacteria Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovoracaceae [G3] bacterium HMT-950 Human host Oral none assigned scarce not determined NA HMT-0951 Bacteria Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema sp. HMT-951 Human host Oral none assigned low Subgingival plaque NA HMT-0952 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanosynbacteraceae Nanosynbacter lyticus Human host Oral none assigned medium Periodontitis NA HMT-0953 Bacteria Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium hwasookii Human host Oral none assigned medium Supragingival plaque NA HMT-0954 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadales [F4] Saccharimonadales [F4 G1] bacterium HMT-954 Human host Oral none assigned scarce Supragingival plaque NA HMT-0955 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadaceae Saccharimonas sicarius Human host Oral none assigned medium Supragingival plaque NA HMT-0956 Bacteria Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria cinerea Human host Oral none assigned high Keratinized gingiva NA HMT-0957 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Nanosynbacteraceae Nanosynbacter featherlites Human host Oral none assigned medium Periodontitis NA HMT-0960 Bacteria Bacillota Clostridia Lachnospirales Lachnospiraceae Agathobacter rectalis Human host Gastrointestinal Tract none assigned high Stool NA HMT-0961 Bacteria Bacillota Clostridia Eubacteriales Oscillospiraceae Faecalibacterium prausnitzii Human host Gastrointestinal Tract none assigned high Stool NA HMT-0962 Bacteria Bacillota Clostridia Eubacteriales Oscillospiraceae Hominimerdicola aceti Human host Gastrointestinal Tract none assigned high Stool NA HMT-0963 Bacteria Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia muciniphila Human host Gastrointestinal Tract none assigned high Stool NA HMT-0964 Bacteria Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes onderdonkii Human host Gastrointestinal Tract none assigned high Stool NA HMT-0965 Bacteria Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes putredinis Human host Gastrointestinal Tract none assigned high Stool NA HMT-0966 Bacteria Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes shahii Human host Gastrointestinal Tract none assigned high Stool NA HMT-0967 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides caccae Human host Gastrointestinal Tract none assigned high Stool NA HMT-0968 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides ovatus Human host Gastrointestinal Tract none assigned high Stool NA HMT-0969 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides stercoris Human host Gastrointestinal Tract none assigned high Stool NA HMT-0970 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides thetaiotaomicron Human host Gastrointestinal Tract none assigned high Stool NA HMT-0971 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides uniformis Human host Gastrointestinal Tract none assigned high Stool NA HMT-0972 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides xylanisolvens Human host Gastrointestinal Tract none assigned high Stool NA HMT-0973 Bacteria Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides distasonis Human host Gastrointestinal Tract none assigned high Stool NA HMT-0974 Bacteria Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides merdae Human host Gastrointestinal Tract none assigned high Stool NA HMT-0975 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola dorei Human host Gastrointestinal Tract none assigned high Stool NA HMT-0976 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola massiliensis Human host Gastrointestinal Tract none assigned high Stool NA HMT-0977 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola plebeius Human host Gastrointestinal Tract none assigned high Stool NA HMT-0978 Bacteria Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola vulgatus Human host Gastrointestinal Tract none assigned high Stool NA HMT-0979 Bacteria Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella copri Human host Gastrointestinal Tract none assigned high Stool NA HMT-0982 Bacteria Chlorobiota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium album Taxonomic Reference Taxonomic Reference none assigned scarce Taxonomic Reference NA HMT-0983 Bacteria Chlorobiota Ignavibacteria Ignavibacteriales Melioribacteraceae Melioribacter roseus Taxonomic Reference Taxonomic Reference none assigned scarce Taxonomic Reference NA HMT-0984 Bacteria Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae Chlorobium limicola Taxonomic Reference Taxonomic Reference none assigned scarce Taxonomic Reference NA HMT-0986 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadales [F2] Saccharimonadales [F2 G1] bacterium HMT-986 Taxonomic Reference Taxonomic Reference none assigned scarce Taxonomic Reference NA HMT-0988 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadaceae Saccharimonas aalborgensis Taxonomic Reference Taxonomic Reference none assigned scarce Taxonomic Reference NA HMT-0989 Bacteria Patescibacteria Saccharimonadia Saccharimonadales Saccharimonadales [F2] Saccharimonadales [F2 G1] bacterium HMT-989 Taxonomic Reference Taxonomic Reference none assigned scarce Taxonomic Reference NA HMT-0991 Bacteria Patescibacteria Patescibacteria [C1] Absconditabacterales Absconditicoccaceae Absconditicoccaceae [G2] bacterium HMT-991 Taxonomic Reference Taxonomic Reference none assigned scarce Taxonomic Reference NA HMT-0994 Bacteria Chloroflexota Caldilineae Caldilineales Caldilineaceae Caldilinea aerophila Taxonomic Reference Taxonomic Reference none assigned scarce Taxonomic Reference NA HMT-0995 Bacteria Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Anaerolinea thermophila Taxonomic Reference Taxonomic Reference none assigned scarce Taxonomic Reference NA HMT-0998 Bacteria Verrucomicrobiota Lentisphaeria Victivallales Victivallaceae Victivallis lenta Human host Gastrointestinal Tract none assigned low Stool NA HMT-0999 Bacteria Eremiobacterota Eremiobacterota [C1] Eremiobacterota [C1 O1] Eremiobacterota [C1 O1 F1] Eremiobacterota [C1 O1 F1 G1] bacterium HMT-999 Taxonomic Reference Taxonomic Reference none assigned scarce Taxonomic Reference NA