HOMD.org Taxon Data::Site/Status Filter applied Date: 2022-09-15 HMT_ID Domain Phylum Class Order Family Genus Species Status Body_site Warning Type_strain 16S_rRNA Clone_count Clone_% Clone_rank Synonyms NCBI_taxon_id NCBI_pubmed_count NCBI_nucleotide_count NCBI_protein_count Genome_ID General_info Cultivability Phenotypic_characteristics Prevalence Disease References 005 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter lwoffii Named Unassigned 0 28090 0 0 0 SEQF2884 010 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter radioresistens Named Unassigned 0 40216 0 0 0 SEQF2864 017 Bacteria Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus octavius Named Unassigned 0 54007 0 0 0 SEQF3146 | SEQF3147 045 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Alkalihalobacillus clausii Named Unassigned 0 AB043853 | AJ297498 79880 69 12897 17592 SEQF1170 121 Bacteria Firmicutes Negativicutes Veillonellales Veillonellaceae Anaeroglobus geminatus Named Oral 0 AF287783 Oral Clone BB166 156456 3 378 4290 SEQF1880 169 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_169 Unnamed Oral 0 AF287747 Oral Clone AG004 712116 0 61 0 SEQF3180 170 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_170 Unnamed Oral 0 AF287749 Oral Clone AP064 712117 0 290 6014 SEQF1849 171 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_171 Unnamed Oral 0 AF385553 | AY349367 Oral Clone BL008 | Oral Clone JA063 | Oral Strain W5536 706438 0 1216 6226 SEQF1693 | SEQF3095 175 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_175 Unnamed Oral 0 AY008314 Oral Clone EP005 712119 0 69 5028 SEQF1848 176 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces naeslundii Named Oral 0 ATCC 12104 | JCM 8349 | NCTC 10301 AB618790 Oral Clone EP011 1655 543 979 6152 SEQF2386 The Oral phylotypes 169 170 171 175 176 and 688 cluster together and all are probably members of the species Actinomyces naeslundii (a fuzzy group). At this time the Dewhirst laboratory has not examined whether strains classified as A. naeslundii genospecies 1 or 2 fall consistently into particular phylotypes in this cluster. The taxonomy of this group is is discussed in the references [1-3]. Over the next year we will be sequencing a number of actinomyces strains from the Moores' collection and should be able to clarify these issues.There is a vast literature on Actinomyces naeslundii which we will not attempt to review here. Easily cultivatedMoores' Collection included 34 isolates Gram positive non-motile bacillusFacultative anaerobe Common member of dental plaque Appears to contribute to periodontal disease. Can be invasive and cause actinomycotic infections throughout the body. 179 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces timonensis Named Oral 0 AF287748 OralsStrain TFI B19SC 1288391 2 52 2116 SEQF2594 182 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Anoxybacillus flavithermus Named Unassigned 0 33934 0 0 0 SEQF2850 190 Bacteria Actinobacteria Actinomycetia Micrococcales Intrasporangiaceae Arsenicicoccus bolidensis Named Unassigned 0 CCUG 47306 AF287753 Oral Strain TFI-B46KS 229480 0 0 0 SEQF2746 191 Bacteria Actinobacteria Actinomycetia Propionibacteriales Propionibacteriaceae Acidipropionibacterium acidifaciens Named Oral 0 AF287756 Oral Strain TFI-FMA5 1410036 4 1014 7138 SEQF1851 | SEQF2583 194 Bacteria Actinobacteria Actinomycetia Propionibacteriales Propionibacteriaceae Arachnia rubra Named Oral 0 AF287757 Oral Clone BN085 712503 0 1 0 SEQF3708 198 Bacteria Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Alloscardovia omnicolens Named Oral 0 CCUG 31649 NR_042583 Oral Strain TFI-Hal-H6-M4 419015 6 191 4347 SEQF2451 | SEQF2547 209 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax ebreus Named Unassigned 0 721785 0 0 0 SEQF2863 211 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax caeni Named Unassigned 0 343013 0 0 0 SEQF3073 216 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax temperans Named Unassigned 0 80878 0 0 0 SEQF2893 229 Bacteria Cyanobacteria Oscillatoriophycideae Oscillatoriales Microcoleaceae Arthrospira platensis Named Unassigned 0 118562 0 0 0 SEQF2856 282 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter junii Named Unassigned 0 40215 0 0 0 SEQF2875 290 Bacteria Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus sp._HMT_290 Lost Unassigned 0 165779 0 0 0 294 Bacteria Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus sp._HMT_294 Phylotype Unassigned 0 165779 0 0 0 295 Bacteria Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus sp._HMT_295 Phylotype Unassigned 0 165779 0 0 0 297 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter johnsonii Named Unassigned 0 40214 0 0 0 SEQF2916 302 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella rava Named Oral 0 81/4-12 | CCUG 58091 | DSM 22548 AF385564 Oral Clone BU035 | Oral STain KCL-W6968 | Oral Strain F0020 | Prevotella sp. oral taxon 302 671218 1 141 3992 SEQF1671 Alloprevotella rava gen. nov. sp. nov. isolated from the human oral cavity and reclassification of Prevotella tannerae (Moore Johnson & Moore 1994) as Alloprevotella tannerae gen. nov. comb. nov. PMID: 22753527. Genome available as ACZK00000000. Link to genome may be broken until name changed at NCBI from Prevotella sp. oral taxon 302 to Alloprevotella rava 308 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_308 Phylotype Oral 0 AF385513 Oral Clone DO039 1283313 0 0 0 312 Bacteria Firmicutes Bacilli Lactobacillales Aerococcaceae Aerococcus viridans Named Unassigned 0 1377 0 0 0 SEQF2883 343 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter xylosoxidans Named Unassigned 0 Y14907 Alcaligenes xylosoxidans 85698 325 3185 81905 SEQF1926 | SEQF2029 | SEQF2030 | SEQF2546 | SEQF2610 345 Bacteria Absconditabacteria_(SR1) Absconditabacteria_(SR1)_[C-1] Absconditabacteria_(SR1)_[O-1] Absconditabacteria_(SR1)_[F-1] Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 Phylotype Oral 0 AF125207 Oral Clones X112 221235 0 0 0 The proposed phylum OP11 has been split into multiple phyla including SR1. 389 Bacteria Firmicutes Bacilli Lactobacillales Aerococcaceae Abiotrophia defectiva Named Oral 0 ATCC 49176 AY207063 Streptococcus defectivus 46125 74 308 3903 SEQF1595 Abiotrophia defectiva was originally named Streptococcus defectivus [6]. Fastidious streptococci that grew as satellite colonies around other microorganisms or in complex media enriched with cysteine were originally described as nutritionally variant streptococci (NVS) by Frenkel and Hirsch [7]. Kawamura et al. recognized that S. defectivus and other NVS were not members of the genus Streptococcus and created the genus Abiotrophia [1] Requires 10 mg/l pyrixoxal hydrochloride or 100 mg/l L-cysteine for growth [1] Gram-positive cocci. Nonmotile nonsporulating catalase negative and oxidase negative. Facultatively anaerobic with complex growth requirements. Grows as satellite colonies adjacent to Staphylococcus epidermidis [1]. Abiotrophia defectiva is a common member of the human oral cavity pharynx intestine and urogenital tracts. In a study examining the normal microflora of the oral cavity it was recovered from buccal hard palate tooth surface and subgingival sites [3]. In a study of microbial risk indicators of early childhood caries Abiotrophia defectiva was significantly more abundant in caries free vs caries active subjects [4]. The organism has also been associated with bacterial endocarditis [25] 407 Bacteria Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Aeriscardovia bacterium_HMT_407 Phylotype Unassigned 0 AY278612 Oral Clone C5AKM003 31953 0 0 0 408 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter sp._HMT_408 Phylotype Unassigned 0 AY278636 Oral Clone C4AKM094 712104 0 2 0 414 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_414 Unnamed Oral 0 AY278610 Oral Clone C3ALM064 712122 0 7 0 SEQF2745 439 Bacteria Chloroflexi Anaerolineae Anaerolineales Anaerolineaceae Anaerolineae_[G-1] bacterium_HMT_439 Unnamed Oral 0 AY331414 Oral Clone P2PB_23 292625 0 0 0 SEQF2641 | SEQF2921 448 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_448 Unnamed Oral 0 AY349365 Oral Clone IP073 712124 0 203 5029 SEQF1701 458 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp._HMT_458 Unnamed Oral 0 AY349380 Oral Clone JM053 712148 0 214 4144 SEQF2445 466 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella tannerae Named Oral 0 AJ005634 Oral Strain TFI-F0032 | Prevotella tanneriae 76122 1 124 5591 SEQF1597 473 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_473 Unnamed Oral 0 AY349399 | AY349402 Oral Clone HF050 | Oral Clone IK062 | Oral Strain TFI-F0040 1283313 0 0 0 SEQF1899 485 Bacteria Proteobacteria Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Agrobacterium tumefaciens Named Unassigned 0 M11223 Achromobacter radiobacter | Agrobacterium radiobacter | Alcaligenes radiobacter | Bacillus radiobacter | Bacterium radiobacter | Bacterium tumefaciens | Phytomonas tumefaciens | Polymonas tumefaciens | Pseudomonas radiobacter | Pseudomonas tumefaciens 358 5235 7363 104544 SEQF1087 | SEQF1167 | SEQF2035 | SEQF2321 | SEQF2322 | SEQF2482 512 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp._HMT_512 Lost Oral 0 DQ003621 Oral Clone MB3_C24 712149 0 5 0 513 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp._HMT_513 Unnamed Oral 0 DQ003635 712150 0 4 0 SEQF3707 525 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_525 Phylotype Oral 0 DQ003632 Oral Clone MB6_C03 712126 0 13 0 531 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter actinomycetemcomitans Named Oral 0 ATCC 33384 | NCTC 9710 M75036 Actinobacillus actinomycetemcomitans | Bacterium acetinomycetum | Bacterium actinomycetem | Bacterium comitans | Haemophilus actinomycetemcomitans | Haemophilus actinomyceticomitans 714 2648 8727 76460 SEQF1074 | SEQF1707 | SEQF1845 | SEQF1894 | SEQF1953 | SEQF1954 | SEQF1955 | SEQF2032 | SEQF2033 | SEQF2034 | SEQF2250 | SEQF2294 | SEQF2295 | SEQF2296 | SEQF2297 | SEQF2436 | SEQF2437 | SEQF2438 | SEQF2439 | SEQF2823 | SEQF2824 | SEQF2825 | SEQF2826 | SEQF2827 | SEQF2828 | SEQF2829 | SEQF2830 | SEQF2831 | SEQF2832 | SEQF2833 | SEQF2834 | SEQF2835 | SEQF2836 | SEQF2837 | SEQF2838 | SEQF2839 | SEQF3475 | SEQF3477 | SEQF3478 | SEQF3479 | SEQF3480 | SEQF3481 | SEQF3482 | SEQF3483 | SEQF3484 | SEQF3485 | SEQF3486 | SEQF3487 | SEQF3488 | SEQF3489 | SEQF3490 | SEQF3491 | SEQF3492 | SEQF3493 | SEQF3494 | SEQF3495 | SEQF3496 | SEQF3497 | SEQF3498 | SEQF3499 | SEQF3500 | SEQF3501 | SEQF3502 | SEQF3503 | SEQF3504 | SEQF3505 | SEQF3506 | SEQF3507 | SEQF3508 | SEQF3509 | SEQF3510 | SEQF3511 | SEQF3512 | SEQF3513 | SEQF3514 | SEQF3515 | SEQF3516 | SEQF3517 | SEQF3518 | SEQF3519 | SEQF3520 545 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter aphrophilus Named Oral 0 M75041 Haemophilus aphrophilus | Haemophilus paraphrophilus 732 24 274 13931 SEQF1221 | SEQF1675 | SEQF1956 554 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter baumannii Named Unassigned 0 X81660 Acinetobacter baumanni | Bacterium anitratum 470 4228 160264 2859777 SEQF1161 | SEQF1164 | SEQF1384 | SEQF1398 | SEQF1485 | SEQF1486 | SEQF1622 559 Bacteria Proteobacteria Alphaproteobacteria Hyphomicrobiales Bradyrhizobiaceae Afipia broomeae Named Unassigned 0 U87759 56946 3 37 8643 SEQF2411 618 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces gerencseriae Named Oral 0 X80414 Actinomyces israelii 52769 28 109 2285 SEQF2575 645 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces israelii Named Oral 0 X82450 Actinobacterium israeli | Brevistreptothrix israeli | Cohnistreptothrix israeli | Corynebacterium israeli | Discomyces israeli | Nocardia israeli | Oospora israeli | Proactinomyces israeli | Streptothrix israeli 1659 418 244 4 SEQF2705 660 Bacteria Proteobacteria Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Aquamicrobium lusatiense Named Unassigned 0 AJ132378 | NR_025312 Defluvibacter lusatiensis 89772 3 22 5 674 Bacteria Actinobacteria Coriobacteriia Coriobacteriales Atopobiaceae Atopobium minutum Named Unassigned 0 X67148 Bacteroides minutum | Eubacterium minutum | Lactobacillus minutum | Lactobacillus minutus 1381 6 23 1837 SEQF2483 688 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces viscosus Named Oral 0 X82453 1656 796 145 4947 SEQF2689 Actinomyces naeslundii II sequences are essentially identical to A. viscosus. The reference strain for this taxon is that for the type strain of A. viscosus which is a hamster isolate. Strains from animals are often different than those from humans however in this case there appear to be a human taxon with high sequence similarity to the hamster strain. The Oral phylotypes 169 170 171 175 176 and 688 cluster together and all are probably members of the species Actinomyces naeslundii (a fuzzy group). At this time the Dewhirst laboratory has not examined whether strains classified as A. naeslundii genospecies 1 or 2 fall consistently into particular phylotypes in this cluster. The taxonomy of this group is is discussed in the references [1-3]. Over the next year we will be sequencing a number of actinomyces strains from the Moores' collection and should be able to clarify these issues.There is a vast literature o­n Actinomyces naeslundii which we will not attempt to review here.
Easily cultivatedMoores' Collection included 34 isolates
Gram positive non-motile bacillusFacultative anaerobe
Common member of dental plaque
Appears to contribute to periodontal disease. Can be invasive and cause actinomycotic infections throughout the body.
708 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces oricola Named Unassigned 0 AJ507295 206043 2 7 0 SEQF3145 720 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter paraphrophilus Named Oral 0 M75042 732 3 0 0 SEQF2750 738 Bacteria Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus prevotii Named Unassigned 0 D14139 Micrococcus prevotii | Peptococcus prevotii | Peptostreptococcus prevotii 33034 12 103 8648 SEQF1083 | SEQF2036 739 Bacteria Actinobacteria Actinomycetia Propionibacteriales Propionibacteriaceae Arachnia propionica Named Oral 0 AJ315953 Actinomyces propionicus | Arachnia propionica | Propionibacterium propionicus 1750 23 126 8807 SEQF1678 | SEQF3097 | SEQF3709 | SEQF3710 746 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces radicidentis Named Unassigned 0 AJ251986 111015 8 3 0 SEQF2781 762 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter segnis Named Oral 0 M75043 Haemophilus segnis 739 3 107 3874 SEQF1957 788 Bacteria Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus tetradius Named Unassigned 0 AF542234 Gaffkya anaerobius | Peptostreptococcus tetradius | Tetracoccus anaerobius 33036 3 358 4110 SEQF1728 811 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Arcanobacterium haemolyticum Named Unassigned 0 AJ234059 Corynebacterium haemolyticum 28264 139 57 5200 SEQF1187 831 Bacteria Firmicutes Bacilli Lactobacillales Carnobacteriaceae Alloiococcus otitis Named Unassigned 0 AY957475 Alloiococcus otitidis 1652 10 66 3262 SEQF2412 849 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces johnsonii Named Oral 0 ATCC 49338 | JCM 16129 AB545933 | GU470900 Previously provisional taxon C25 544581 2 1965 12553 SEQF1668 | SEQF2317 | SEQF2449 Was previously provisional taxon C25 in RefSeq Extended V1.1 852 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces massiliensis Named Oral 0 JCM 16130 AB545934 Previously provisional taxon C93 461393 2 538 8156 SEQF1903 | SEQF2385
Was previously provisional taxon C93 in RefSeq Extended V1.1
859 Bacteria Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus lactolyticus Named Unassigned 0 ATCC 51172 | DSM 7456 | JCM 8140 AB673373 Previously provisional taxon A64 33032 6 816 4425 SEQF1982
Was previously provisional taxon A64 in RefSeq Extended V1.1
866 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces graevenitzii Named Oral 0 CCUG 27294 | DSM 15540 NR_042167 Previously provisional taxon A50 55565 9 208 7344 SEQF2031 | SEQF2450
Was previously provisional taxon A50 in RefSeq Extended V1.1. Original RefSeq for A50 AF385517 is chimeric.
874 Bacteria Absconditabacteria_(SR1) Absconditabacteria_(SR1)_[C-1] Absconditabacteria_(SR1)_[O-1] Absconditabacteria_(SR1)_[F-1] Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 Phylotype Oral 0 221235 0 0 0 SEQF2626 875 Bacteria Absconditabacteria_(SR1) Absconditabacteria_(SR1)_[C-1] Absconditabacteria_(SR1)_[O-1] Absconditabacteria_(SR1)_[F-1] Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 Phylotype Oral 0 221235 0 0 0 888 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces dentalis Named Oral 0 CCUG 48064 | DSM 19115 | R-18165 AJ697609 272548 2 204 2168 SEQF2573 893 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces oris Named Oral 0 ATCC 27044 | JCM 16131 AB545935 | GQ421308 Actinomyces naeslundii genospecies 2 544580 28 2317 2900 SEQF2431 | SEQF2806 Actinomyces oris HOT-893 is part of a cluster of taxa that includes Actinomyces sp. HOT-169 170 171 and 175. Whether these taxa should be lumped into a single large fuzzy species or kept separate as distinct genotypes will require further investigation. 896 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_896 Phylotype Oral 0 JQ406543 Actinomyces genomospecies K1 | Actinomyces sp. clone FL377 1654 0 0 0 897 Bacteria Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces sp._HMT_897 Unnamed Oral 0 KC203057 Actinomyces sp. clone HS14_2W_C6 1654 0 0 0 SEQF3062 898 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp._HMT_898 Phylotype Oral 0 KC203060 Aggregatibacter sp. HS19_2W_I12 416916 0 0 0 912 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_912 Phylotype Oral 0 JQ406532 | KC203063 Alloprevotella sp. clone clone HS3_1W_C6 | Prevotella genomospecies K1 | Prevotella sp. clone BL176 1283313 0 0 0 913 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_913 Phylotype Oral 0 JQ406534 Prevotella genomospecies K2 | Prevotella sp. clone BL216 1283313 0 0 0 914 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella sp._HMT_914 Phylotype Oral 0 JQ406539 Prevotella genomospecies K3 | Prevotella sp. clone DL303 1283313 0 0 0 949 Bacteria Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter sp._HMT_949 Phylotype Oral 0 JF506655 416916 0 0 0 990 Bacteria Absconditabacteria_(SR1) Absconditabacteria_(SR1)_[C-1] Absconditabacteria_(SR1)_[O-1] Absconditabacteria_(SR1)_[F-1] Absconditabacteria_(SR1)_[G-1] bacterium_HMT_990 NonOralRef NonOralRef 0 221235 0 0 0 991 Bacteria Absconditabacteria_(SR1) Absconditabacteria_(SR1)_[C-1] Absconditabacteria_(SR1)_[O-1] Absconditabacteria_(SR1)_[F-1] Absconditabacteria_(SR1)_[G-1] bacterium_HMT_991 NonOralRef NonOralRef 0 221235 0 0 0 SEQF3107 995 Bacteria Chloroflexi Anaerolineae Anaerolineales Anaerolineaceae Anaerolinea thermophila NonOralRef NonOralRef 0 167964 4 10 9446 SEQF2715