HOMD ::Genus:Lachnoanaerobaculum

Genus: Lachnoanaerobaculum

Full Lineage: Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoanaerobaculum
Lower rank member(s): show[+]

[Species:Lachnoanaerobaculum gingivalis] [Species:Lachnoanaerobaculum orale] [Species:Lachnoanaerobaculum saburreum] [Species:Lachnoanaerobaculum sp. HMT-083] [Species:Lachnoanaerobaculum sp. HMT-089]
[Species:Lachnoanaerobaculum sp. HMT-430] [Species:Lachnoanaerobaculum sp. HMT-441] [Species:Lachnoanaerobaculum sp. HMT-496] [Species:Lachnoanaerobaculum umeaense]

LINKS: Ecology Home | Life Page: Lachnoanaerobaculum

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Lachnoanaerobaculum

Human Microbiome Project Mapping (Data from healthy subjects. - manuscript in revision)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.24	0.29	0.25	0.12	0.20	0.13	0.26	0.98	0.75	0.89	0.20	0.01	0	0.10	0.01	0.17	0.05	0.20
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.04	0.02	0.04	0.02	0.04	0.13	0.10	0.57	0.14	0.25	0	0	0	0.10	0	0	0	0.02
90^thp	0.54	0.77	0.53	0.35	0.45	0.13	0.42	1.47	1.40	1.63	0.76	0.02	0.01	0.10	0.01	0.43	0.17	0.48
Stdev	0.21	0.35	0.31	0.17	0.27	0	0.14	0.41	0.52	0.64	0.45	0.01	0.01	0	0.01	0.46	0.11	0.22
Prev(%)	58.33	64.05	29.17	33.33	16.72	100.00	37.50	100.00	68.18	98.58	3.08	0	0	0	0	12.50	0	0.80

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.29	0.30	0.04	0.17	0.33	0.28	1.14	0.81	0.79	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.03	0	0.09	0.12	0.14	0
90^thp	0.87	0.96	0.11	0.48	0.71	0.66	2.42	1.63	1.47	0
Stdev	0.43	0.52	0.11	0.21	0.31	0.27	1.33	0.75	0.89	0.01
Prev(%)	77.92	68.83	46.75	84.42	92.21	84.42	93.51	97.40	98.70	9.09

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.43	0.49	0.09	0.23	0.53	0.48	1.21	1.00	1.11	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.07	0.13	0.19	0.17	0.17	0
90^thp	1.13	1.44	0.20	0.59	1.18	0.91	2.83	2.11	2.45	0
Stdev	0.65	0.64	0.29	0.25	0.54	0.38	1.42	0.83	1.10	0
Prev(%)	83.78	86.49	45.27	87.84	95.95	96.62	98.65	97.97	98.65	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.21	0.20	0.09	0.18	0.41	0.26	0.93	0.78	0.79	0	0.01	0.01	0.03	0.06	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.01	0	0.13	0.11	0.11	0	0	0	0	0	0	0	0	0
90^thp	0.57	0.56	0.20	0.44	0.86	0.64	1.99	1.65	2.08	0	0.02	0	0.03	0.09	0	0	0	0
Stdev	0.34	0.31	0.29	0.26	0.47	0.28	0.92	0.69	0.82	0	0.06	0.07	0.14	0.24	0	0	0	0
Prev(%)	78.81	81.46	59.44	84.93	91.28	84.61	94.34	97.33	99.36	0	15.23	7.93	13.22	17.97	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.44	0.48	0.20	0.47	1.00	0.60	1.85	1.66	1.74	0	0	0	0	0	0	0	0	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.15	0.13	0.22	0.30	0.34	0	0	0	0	0	0	0	0	0
90^thp	1.13	1.33	0.42	1.16	2.10	1.11	4.07	3.59	3.65	0	0	0	0	0	0	0	0	0
Stdev	0.56	0.63	0.53	0.55	0.89	0.43	1.77	1.42	1.59	0	0	0	0	0	0	0	0	0.08
Prev(%)	88.64	87.32	54.81	89.08	95.65	95.54	94.70	99.76	99.51	0	0	0	0	0	0	0	0	3.41

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.08	0.14	0.07	0.10	0.14	0.13	0.27	0.26	0.23	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.01	0	0	0	0	0.03	0.01	0	0
90^thp	0.21	0.28	0.19	0.29	0.29	0.37	0.54	0.53	0.59	0
Stdev	0.13	0.21	0.10	0.15	0.17	0.17	0.30	0.27	0.26	0
Prev(%)	81.08	97.06	88.37	91.43	89.29	92.00	100.00	100.00	90.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - manuscript in revision)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.18	0.24	0.18	0.09	0.12	0.14	0.13	0.43	0.63	0.79	0.02	0	0	0	0	0.11	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.14	0.04	0	0.05	0.18	0	0	0	0	0	0	0	0
90^thp	0.47	0.64	0.51	0.25	0.39	0.14	0.24	1.24	1.36	1.50	0	0	0	0	0	0	0	0
Stdev	0.18	0.35	0.31	0.18	0.24	0	0.10	0.48	0.57	0.63	0.19	0	0	0	0.01	0.41	0.02	0.05
Prev(%)	75.00	75.76	62.50	52.94	52.66	100.00	100.00	62.50	92.00	98.83	0.90	0	0	0	9.09	7.14	1.01	0.91

[Species:Lachnoanaerobaculum gingivalis]	[Species:Lachnoanaerobaculum orale]	[Species:Lachnoanaerobaculum saburreum]	[Species:Lachnoanaerobaculum sp. HMT-083]	[Species:Lachnoanaerobaculum sp. HMT-089]
[Species:Lachnoanaerobaculum sp. HMT-430]	[Species:Lachnoanaerobaculum sp. HMT-441]	[Species:Lachnoanaerobaculum sp. HMT-496]	[Species:Lachnoanaerobaculum umeaense]

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