HOMD ::Genus:Oribacterium

Genus: Oribacterium

Full Lineage: Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Oribacterium Each rank name is a link to abundance plots at that rank:

Lower rank member(s): [Species:Oribacterium asaccharolyticum] [Species:Oribacterium parvum] [Species:Oribacterium sinus] [Species:Oribacterium sp. HMT-078] [Species:Oribacterium sp. HMT-102]

LINKS: Ecology Home | Life Page: Oribacterium

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.060	0.054	0.017	0.149	0.571	2.249	1.222	0.973	1.216	0.002
10^thp	0.000	0.000	0.000	0.000	0.091	0.313	0.216	0.193	0.285	0.000
90^thp	0.172	0.101	0.058	0.397	1.088	4.583	3.001	1.962	2.443	0.000
Stdev	0.117	0.140	0.038	0.232	0.543	2.552	1.067	0.733	0.862	0.010
Prev(%)	50.649	46.753	35.065	71.429	100.000	94.805	96.104	100.000	97.403	5.195

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.114	0.066	0.040	0.288	0.894	2.856	1.471	1.237	1.446	0.000
10^thp	0.000	0.000	0.000	0.000	0.182	0.657	0.374	0.253	0.434	0.000
90^thp	0.330	0.220	0.084	0.715	1.786	6.186	3.086	2.272	2.681	0.000
Stdev	0.233	0.147	0.150	0.443	0.805	3.031	1.179	0.938	0.988	0.001
Prev(%)	61.486	47.297	34.459	87.838	97.973	100.000	97.973	98.649	99.324	1.399

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.063	0.000	0.027	0.152	0.694	2.571	1.156	1.032	1.264	0.000	0.074	0.000	0.032	0.066	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.100	0.269	0.236	0.329	0.374	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.114	0.000	0.063	0.440	1.392	5.551	2.320	1.847	2.389	0.000	0.000	0.000	0.041	0.062	0.000	0.000	0.000	0.000
Stdev	0.333	0.000	0.057	0.257	0.702	3.520	0.958	0.664	0.862	0.000	1.207	0.000	0.178	0.330	0.000	0.000	0.000	0.000
Prev(%)	46.358	0.000	47.552	73.973	98.658	94.615	97.024	99.333	99.355	0.000	8.621	0.000	12.069	14.286	0.000	0.000	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.125	0.021	0.000	0.392	1.576	3.911	2.016	1.755	2.141	0.000	0.000	0.000	0.000	0.217	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.320	0.867	0.282	0.400	0.599	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.312	0.070	0.000	1.032	2.911	8.169	4.159	3.309	4.033	0.000	0.000	0.000	0.000	0.245	0.000	0.000	0.000	0.000
Stdev	0.278	0.057	0.000	0.569	1.270	4.044	1.672	1.534	1.472	0.000	0.000	0.000	0.000	0.814	0.000	0.000	0.000	0.000
Prev(%)	64.938	26.829	0.000	81.141	96.931	99.405	96.262	99.027	99.757	0.000	0.000	0.000	0.000	22.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.219	0.124	0.078	0.148	0.359	0.386	0.786	0.706	0.642	0.000
10^thp	0.000	0.000	0.000	0.000	0.025	0.002	0.034	0.049	0.008	0.000
90^thp	0.500	0.185	0.199	0.415	0.686	0.894	2.021	1.670	1.159	0.000
Stdev	0.583	0.288	0.120	0.229	0.659	0.442	0.938	1.027	1.010	0.000
Prev(%)	86.486	76.471	72.093	82.857	100.000	90.000	100.000	96.774	95.000	0.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.087	0.026	0.253	0.012	0.106	0.260	1.462	0.985	0.846	1.217	0.013	0.000	0.000	0.000	0.000	0.001	0.006	0.005
10^thp	0.000	0.000	0.000	0.000	0.000	0.260	0.560	0.000	0.032	0.380	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.145	0.060	0.614	0.030	0.305	0.260	2.726	2.270	1.478	2.180	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.146	0.128	0.260	0.025	0.285	0.000	1.317	1.001	0.722	0.781	0.135	0.000	0.000	0.000	0.000	0.005	0.091	0.080
Prev(%)	62.500	27.020	83.333	29.412	44.415	100.000	100.000	68.750	92.000	99.296	0.901	0.000	0.000	0.000	0.000	7.143	0.505	0.727

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