Class: Actinomycetes
Download OptionsLower rank member(s): [Order:Actinomycetales] [Order:Bifidobacteriales] [Order:Micrococcales] [Order:Mycobacteriales] [Order:Propionibacteriales]
Genera:
LINKS: Ecology Home
| Life Page: Actinomycetes
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 23.223 | 28.533 | 2.826 | 9.007 | 9.385 | 5.530 | 8.855 | 7.272 | 13.939 | 62.267 | 69.888 | 69.741 | 50.680 | 54.155 | 0.274 | 0.320 | 0.227 | 0.000 |
| 10thp | 6.405 | 12.679 | 0.118 | 1.163 | 2.577 | 0.915 | 2.297 | 1.228 | 4.796 | 30.553 | 33.585 | 33.274 | 10.314 | 9.635 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 41.780 | 46.821 | 6.580 | 24.813 | 16.750 | 12.205 | 17.200 | 16.116 | 23.936 | 86.726 | 95.975 | 96.137 | 87.514 | 90.079 | 0.368 | 0.581 | 0.024 | 0.000 |
| Stdev | 13.891 | 14.793 | 4.669 | 8.691 | 6.620 | 5.669 | 6.414 | 5.628 | 7.793 | 21.717 | 24.580 | 25.118 | 28.162 | 28.598 | 0.991 | 0.928 | 1.380 | 0.000 |
| Prev(%) | 98.675 | 97.351 | 97.203 | 97.260 | 97.987 | 97.692 | 99.702 | 96.000 | 99.355 | 99.000 | 100.000 | 100.000 | 99.425 | 100.000 | 74.648 | 77.027 | 19.737 | 0.000 |
HMP 16S RefSeq (V3-V5) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 24.362 | 30.957 | 5.374 | 10.679 | 12.879 | 5.979 | 11.477 | 7.406 | 14.263 | 74.193 | 79.362 | 78.425 | 54.064 | 57.679 | 5.035 | 4.714 | 4.695 | 0.966 |
| 10thp | 6.931 | 12.756 | 0.044 | 1.776 | 3.746 | 1.310 | 2.277 | 1.210 | 3.900 | 43.632 | 29.455 | 28.546 | 6.830 | 7.181 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 46.200 | 53.396 | 12.027 | 21.450 | 22.741 | 10.770 | 23.010 | 16.484 | 25.693 | 94.990 | 99.250 | 99.377 | 92.956 | 93.554 | 15.741 | 11.962 | 9.155 | 0.206 |
| Stdev | 16.346 | 16.219 | 12.002 | 12.498 | 11.269 | 9.187 | 10.735 | 7.649 | 11.595 | 20.653 | 26.845 | 27.574 | 31.436 | 31.957 | 12.969 | 13.677 | 14.992 | 8.246 |
| Prev(%) | 100.000 | 100.000 | 93.333 | 100.000 | 99.744 | 99.702 | 99.688 | 99.027 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 86.782 | 83.607 | 66.492 | 54.988 |
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 15.545 | 13.800 | 3.636 | 5.917 | 6.365 | 5.894 | 4.065 | 4.342 | 5.366 | 78.476 |
| 10thp | 1.861 | 4.253 | 0.110 | 0.966 | 1.638 | 1.519 | 0.985 | 0.645 | 0.156 | 52.670 |
| 90thp | 37.549 | 34.436 | 10.901 | 14.629 | 11.274 | 13.148 | 7.587 | 8.939 | 10.264 | 97.202 |
| Stdev | 14.665 | 13.708 | 5.058 | 5.806 | 5.433 | 4.300 | 2.621 | 4.784 | 4.256 | 24.771 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 |
HMP Metaphlan (not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 24.223 | 30.989 | 22.544 | 3.889 | 9.250 | 10.100 | 4.268 | 4.652 | 6.920 | 17.233 | 49.496 | 70.603 | 74.772 | 42.000 | 10.482 | 9.599 | 9.822 | 0.413 |
| 10thp | 6.990 | 12.165 | 8.361 | 0.000 | 0.925 | 10.100 | 1.049 | 0.335 | 2.130 | 5.380 | 12.588 | 19.124 | 48.609 | 42.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 46.208 | 50.300 | 52.590 | 6.886 | 22.325 | 10.100 | 10.227 | 8.475 | 13.270 | 31.025 | 79.469 | 93.708 | 95.409 | 42.000 | 16.040 | 25.418 | 43.673 | 0.831 |
| Stdev | 14.907 | 15.029 | 18.353 | 6.942 | 9.347 | 0.000 | 5.973 | 3.364 | 7.743 | 10.553 | 24.322 | 28.708 | 27.242 | 0.000 | 22.499 | 26.125 | 21.634 | 1.278 |
| Prev(%) | 100.000 | 99.747 | 100.000 | 82.353 | 99.734 | 100.000 | 100.000 | 93.750 | 100.000 | 100.000 | 98.198 | 100.000 | 100.000 | 100.000 | 63.636 | 64.286 | 48.990 | 74.182 |
Eren V1-V3 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 24.984 | 30.969 | 1.952 | 6.918 | 8.445 | 5.778 | 10.279 | 7.613 | 15.149 | 0.012 |
| 10thp | 7.793 | 12.241 | 0.036 | 0.629 | 2.415 | 1.262 | 1.657 | 1.787 | 6.295 | 0.000 |
| 90thp | 44.096 | 50.371 | 4.935 | 14.105 | 14.902 | 12.126 | 18.391 | 16.108 | 23.942 | 0.050 |
| Stdev | 15.919 | 15.773 | 3.929 | 7.225 | 6.036 | 5.875 | 8.073 | 5.877 | 8.297 | 0.026 |
| Prev(%) | 100.000 | 100.000 | 92.208 | 100.000 | 98.701 | 97.403 | 100.000 | 98.701 | 100.000 | 25.974 |
Eren V3-V5 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 15.317 | 21.926 | 0.858 | 2.932 | 4.422 | 2.754 | 4.346 | 3.678 | 6.588 | 0.007 |
| 10thp | 3.501 | 7.799 | 0.000 | 0.294 | 1.125 | 0.659 | 1.178 | 0.535 | 1.329 | 0.000 |
| 90thp | 29.516 | 36.925 | 2.223 | 7.308 | 8.791 | 5.476 | 7.895 | 7.645 | 14.381 | 0.015 |
| Stdev | 11.166 | 11.826 | 3.176 | 3.867 | 3.805 | 2.504 | 3.487 | 3.794 | 5.355 | 0.026 |
| Prev(%) | 100.000 | 100.000 | 76.351 | 99.324 | 100.000 | 100.000 | 99.324 | 100.000 | 100.000 | 16.084 |
