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Taxonomy: V4.0   |  16S rRNA RefSeq: V16.01   |  Genomic RefSeq: V11.01
Class: Mollicutes
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Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Mycoplasmatota; Mollicutes

Lower rank member(s): [Order:Mollicutes [O1]] [Order:Mollicutes [O2]] [Order:Mycoplasmoidales]
Genera:
Oral:
SUBP-- Subgingival Plaque SUPP -- Supragingival Plaque PERIO -- Periodontal AKE -- Attached Keratinized Gingiva BMU -- Buccal Mucosa
HPA -- Hard Palate SAL -- Saliva THR -- Throat PTO -- Palatine Tonsils TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease RRC -- R_Retroauricular Crease LAF -- L_Antecubital Fossa RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus MVA -- Mid Vagina PFO -- Posterior Fornix
Gut:
STO -- Stool
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0440.0420.0020.0000.0000.0990.0290.1470.0050.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.1160.0090.0000.0000.0000.2210.0620.2840.0140.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.1390.4150.0130.0000.0000.3090.1180.4850.0200.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)28.47711.2583.4970.0000.00035.38523.51249.33315.4840.0000.0000.0000.0000.0000.0000.0000.0000.000

HMP 16S RefSeq (V3-V5) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0200.0000.0000.0000.0000.0350.0000.0930.0000.0000.0000.0000.0000.0000.0000.0130.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0550.0000.0000.0000.0000.0480.0000.2310.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0650.0000.0000.0000.0000.2270.0000.3170.0000.0000.0000.0000.0000.0000.0000.1360.0000.000
Prev(%)22.7160.0000.0000.0000.00020.8330.00035.7660.0000.0000.0000.0000.0000.0000.0003.8250.0000.000

Dewhirst (35x9) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0180.0080.0030.0140.0080.0070.0140.1260.0020.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0340.0270.0110.0600.0210.0130.0370.2190.0020.000
Stdev0.0480.0150.0090.0350.0190.0170.0290.4070.0060.000
Prev(%)31.08141.17632.55840.00035.71454.00039.39458.06515.0000.000

HMP Metaphlan (not published)
No Notes
SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.8570.0750.1750.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0003.5300.0420.5220.000
Stdev0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0001.6060.2640.5740.000
Prev(%)0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.00045.45514.28622.2220.000

Eren V1-V3 www.pnas.org
No Notes

Eren V3-V5 www.pnas.org
No Notes