Class: Negativicutes
Download OptionsLower rank member(s): [Order:Selenomonadales] [Order:Veillonellales]
Genera:
LINKS: Ecology Home
| Life Page: Negativicutes
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 6.103 | 4.890 | 5.877 | 4.411 | 7.113 | 15.503 | 11.742 | 11.386 | 12.143 | 0.272 | 0.184 | 0.107 | 0.609 | 0.740 | 1.339 | 1.019 | 1.127 | 1.337 |
| 10thp | 1.185 | 0.484 | 0.271 | 0.712 | 2.044 | 5.648 | 4.329 | 4.371 | 6.506 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 13.955 | 9.650 | 16.269 | 8.738 | 14.239 | 27.341 | 19.493 | 18.763 | 18.125 | 0.724 | 0.252 | 0.240 | 1.919 | 1.763 | 3.899 | 0.845 | 0.908 | 2.474 |
| Stdev | 5.571 | 4.764 | 6.403 | 4.357 | 4.631 | 8.220 | 6.035 | 6.217 | 4.790 | 0.652 | 0.842 | 0.384 | 1.096 | 1.503 | 3.962 | 3.585 | 4.132 | 5.529 |
| Prev(%) | 100.000 | 99.338 | 99.301 | 100.000 | 100.000 | 99.231 | 99.702 | 100.000 | 100.000 | 70.667 | 53.736 | 46.742 | 68.966 | 66.359 | 47.887 | 45.946 | 28.947 | 34.641 |
HMP 16S RefSeq (V3-V5) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 8.158 | 6.508 | 11.082 | 7.931 | 13.171 | 21.494 | 16.079 | 14.073 | 16.531 | 0.660 | 0.837 | 0.712 | 1.987 | 2.042 | 1.111 | 0.557 | 1.016 | 0.977 |
| 10thp | 1.832 | 0.843 | 0.669 | 1.427 | 4.481 | 8.408 | 5.135 | 4.493 | 6.899 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 16.830 | 13.960 | 28.257 | 17.891 | 25.130 | 37.912 | 30.225 | 25.138 | 29.521 | 1.695 | 1.721 | 1.381 | 4.159 | 5.734 | 3.341 | 0.034 | 1.157 | 2.849 |
| Stdev | 7.022 | 5.242 | 11.188 | 7.453 | 8.736 | 11.688 | 9.632 | 8.888 | 9.226 | 1.493 | 2.657 | 2.176 | 3.763 | 3.092 | 3.223 | 1.998 | 4.005 | 2.673 |
| Prev(%) | 99.753 | 100.000 | 99.012 | 99.752 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 82.375 | 67.834 | 64.815 | 86.207 | 88.667 | 64.368 | 13.115 | 25.654 | 42.579 |
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 4.944 | 7.011 | 3.296 | 4.502 | 4.525 | 4.176 | 8.012 | 5.666 | 6.066 | 0.030 |
| 10thp | 0.234 | 0.769 | 0.076 | 0.304 | 0.677 | 0.661 | 2.561 | 1.009 | 0.155 | 0.000 |
| 90thp | 12.127 | 16.685 | 9.487 | 11.253 | 8.451 | 9.795 | 13.742 | 10.296 | 11.932 | 0.133 |
| Stdev | 6.464 | 6.430 | 4.191 | 5.297 | 3.027 | 3.469 | 5.363 | 3.667 | 4.432 | 0.063 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 25.000 |
HMP Metaphlan (not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 5.541 | 5.199 | 9.066 | 7.616 | 5.823 | 3.720 | 12.424 | 12.344 | 13.289 | 14.790 | 0.394 | 0.152 | 0.014 | 0.820 | 0.326 | 0.614 | 0.859 | 0.900 |
| 10thp | 1.274 | 0.775 | 1.860 | 0.492 | 0.660 | 3.720 | 6.956 | 5.010 | 3.044 | 7.985 | 0.000 | 0.000 | 0.000 | 0.820 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 9.732 | 10.685 | 16.509 | 12.194 | 12.770 | 3.720 | 19.892 | 23.445 | 21.752 | 22.440 | 0.147 | 0.216 | 0.020 | 0.820 | 1.410 | 0.397 | 2.080 | 2.623 |
| Stdev | 4.063 | 4.179 | 6.778 | 7.729 | 5.291 | 0.000 | 5.974 | 8.003 | 7.035 | 5.785 | 2.221 | 0.571 | 0.048 | 0.000 | 0.746 | 2.084 | 3.531 | 2.054 |
| Prev(%) | 100.000 | 99.495 | 100.000 | 94.118 | 99.468 | 100.000 | 100.000 | 100.000 | 100.000 | 99.531 | 19.820 | 33.333 | 18.750 | 100.000 | 18.182 | 28.571 | 24.242 | 64.545 |
Eren V1-V3 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 5.461 | 4.356 | 4.831 | 3.571 | 6.330 | 15.790 | 11.247 | 10.443 | 11.771 | 1.730 |
| 10thp | 0.917 | 0.512 | 0.268 | 0.394 | 2.278 | 6.546 | 4.144 | 2.815 | 5.193 | 0.000 |
| 90thp | 12.648 | 9.455 | 13.248 | 8.049 | 12.952 | 26.062 | 18.799 | 19.261 | 16.987 | 4.183 |
| Stdev | 5.507 | 4.744 | 5.311 | 3.544 | 4.040 | 7.160 | 6.422 | 5.778 | 5.119 | 5.528 |
| Prev(%) | 98.701 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 55.844 |
Eren V3-V5 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 7.057 | 5.946 | 5.072 | 3.448 | 6.536 | 15.936 | 9.929 | 8.640 | 10.773 | 0.683 |
| 10thp | 1.725 | 1.370 | 0.254 | 0.588 | 1.859 | 5.868 | 3.603 | 2.836 | 4.036 | 0.000 |
| 90thp | 15.012 | 10.794 | 12.951 | 7.675 | 12.784 | 25.188 | 16.402 | 15.959 | 17.921 | 2.625 |
| Stdev | 5.960 | 4.605 | 5.505 | 3.028 | 4.387 | 7.661 | 5.703 | 5.036 | 5.398 | 1.420 |
| Prev(%) | 100.000 | 100.000 | 99.324 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 56.643 |
