HOMD Banner
Taxonomy: V4.2   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.02   |  Viruses: V1.2

Order: Cardiobacteriales

Download Options
Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Cardiobacteriales
Each rank name is a link to abundance plots at that rank:

Lower rank member(s): [Family:Cardiobacteriaceae]
Genera:
Hide Legend
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.1320.1660.0100.0060.0050.0060.0020.0020.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.3930.4810.0000.0200.0130.0180.0000.0000.0000.000
Stdev0.2210.2470.0750.0180.0230.0200.0150.0120.0040.000
Prev(%)70.13075.3256.49416.88315.58414.2863.8963.8961.2990.000
Eren V3-V5 www.pnas.org (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.2260.3040.0070.0160.0040.0120.0050.0050.0020.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.6100.8650.0000.0360.0060.0460.0000.0000.0000.000
Stdev0.4400.4760.0660.0600.0160.0300.0260.0370.0080.000
Prev(%)64.18967.5684.73020.27010.13520.9468.1086.0817.4320.000
Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.2010.2120.0210.0000.0000.0000.0000.0000.0000.0000.0070.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.5100.5550.0160.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.2920.2810.1100.0000.0000.0000.0000.0000.0000.0000.0790.0000.0000.0000.0000.0000.0000.000
Prev(%)82.11986.75514.6850.0000.0000.0000.0000.0000.0000.0005.1720.0000.0000.0000.0000.0000.0000.000
Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.3310.4250.0340.0270.0000.0240.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0160.0250.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.7960.9160.0370.0760.0000.0560.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.4270.5400.1810.0870.0000.0790.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)91.11192.43916.29627.7920.00036.0120.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Dewhirst (35x9) (not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0760.1030.0020.0030.0170.0030.0040.0030.0000.000
10thp0.0000.0010.0000.0000.0000.0000.0000.0000.0000.000
90thp0.1470.2910.0050.0100.0300.0080.0020.0020.0000.000
Stdev0.1990.1390.0060.0050.0470.0050.0240.0160.0010.000
Prev(%)71.62288.23532.55851.42946.42942.00015.15212.9035.0000.000
Human Microbiome Project Metaphlan (not published) (data from healthy subjects)
No Notes

SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)1.5151.4470.3790.0500.0470.0000.0340.0020.0000.0060.0010.0000.0340.0000.0000.1490.0000.000
10thp0.3530.1350.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp3.3153.1101.2730.2620.0950.0000.0910.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev1.3511.2950.5490.1090.1530.0000.0500.0070.0000.0730.0120.0020.1930.0000.0000.5590.0000.001
Prev(%)100.00096.21270.83323.52926.8620.00050.0006.2500.0009.6240.9014.1673.1250.0000.0007.1430.0000.182