HOMD ::order::Coriobacteriales

Order: Coriobacteriales

Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Actinomycetota; Coriobacteriia; Coriobacteriales
Lower rank member(s): [Family:Atopobiaceae] [Family:Coriobacteriaceae]
Genera:

LINKS: Ecology Home | Life Page: Coriobacteriales

Oral:	SUBP-- Subgingival Plaque	SUPP -- Supragingival Plaque	PERIO -- Periodontal	AKE -- Attached Keratinized Gingiva	BMU -- Buccal Mucosa
Oral:	HPA -- Hard Palate	SAL -- Saliva	THR -- Throat	PTO -- Palatine Tonsils	TDO -- Tongue Dorsum
Nasal:	ANA -- Anterior Nares
Skin:	LRC -- L_Retroauricular Crease	RRC -- R_Retroauricular Crease	LAF -- L_Antecubital Fossa	RAF -- R_Antecubital Fossa
Vaginal:	VIN -- Vaginal Introitus	MVA -- Mid Vagina	PFO -- Posterior Fornix
Gut:	STO -- Stool

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

HMP 16S RefSeq (V1-V3) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.124	0.019	0.018	0.071	0.413	0.603	0.647	0.490	0.825	0.009	0.011	0.019	0.094	0.071	0.942	0.881	0.930	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.012	0.030	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.238	0.063	0.039	0.144	1.086	1.436	1.560	1.035	2.080	0.010	0.018	0.008	0.133	0.081	1.646	0.623	0.030	0.000
Stdev	0.364	0.039	0.058	0.144	0.587	0.748	0.712	0.744	0.953	0.042	0.048	0.136	0.449	0.347	3.579	3.617	5.467	0.000
Prev(%)	63.576	38.411	24.476	63.699	83.221	79.231	87.500	90.667	95.484	11.000	13.506	10.765	19.540	14.286	36.620	27.027	11.842	0.000

HMP 16S RefSeq (V3-V5) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.167	0.000	0.033	0.156	0.806	0.768	0.945	0.656	1.052	0.000	0.047	0.000	0.000	0.000	1.067	1.301	1.305	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.046	0.015	0.022	0.048	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.406	0.000	0.067	0.403	1.914	1.712	2.491	1.652	2.820	0.000	0.006	0.000	0.000	0.000	1.838	0.636	0.432	0.000
Stdev	0.437	0.000	0.127	0.413	1.075	0.889	1.132	0.919	1.290	0.000	0.483	0.000	0.000	0.000	3.829	5.033	4.935	0.000
Prev(%)	68.889	0.000	19.012	60.298	86.445	92.560	90.966	91.484	95.134	0.000	10.828	0.000	0.000	0.000	16.667	15.301	14.660	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	1.177	0.355	0.483	0.104	0.217	1.368	0.713	0.754	0.971	0.000
10^thp	0.002	0.005	0.000	0.002	0.012	0.084	0.117	0.042	0.004	0.000
90^thp	2.652	1.277	0.581	0.301	0.558	5.320	1.532	1.411	2.309	0.000
Stdev	4.114	0.574	1.414	0.149	0.226	2.073	0.689	1.470	1.504	0.000
Prev(%)	91.892	97.059	74.419	100.000	92.857	100.000	100.000	96.774	97.500	0.000

HMP Metaphlan (not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.268	0.078	1.077	0.005	0.086	0.100	0.785	0.507	0.831	1.015	0.008	0.002	0.003	0.000	0.069	0.000	1.150	0.008
10^thp	0.000	0.000	0.000	0.000	0.000	0.100	0.028	0.000	0.000	0.060	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.545	0.210	2.957	0.004	0.225	0.100	1.652	1.615	1.940	2.305	0.000	0.000	0.000	0.000	0.210	0.000	0.355	0.000
Stdev	0.363	0.203	1.290	0.019	0.251	0.000	0.913	0.729	1.796	1.029	0.074	0.008	0.013	0.000	0.171	0.000	4.699	0.141
Prev(%)	83.333	44.192	79.167	11.765	42.021	100.000	87.500	68.750	76.000	97.183	2.703	4.167	6.250	0.000	18.182	0.000	13.131	1.455

Eren V1-V3 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.115	0.027	0.013	0.094	0.460	0.712	0.840	0.561	0.983	0.000
10^thp	0.000	0.000	0.000	0.000	0.036	0.000	0.000	0.010	0.033	0.000
90^thp	0.257	0.095	0.021	0.224	1.175	1.802	2.043	1.239	2.758	0.000
Stdev	0.275	0.054	0.053	0.182	0.634	0.860	0.965	0.894	1.130	0.000
Prev(%)	55.844	33.766	16.883	62.338	90.909	83.117	88.312	89.610	90.909	1.299

Eren V3-V5 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.134	0.038	0.015	0.083	0.384	0.522	0.592	0.406	0.637	0.001
10^thp	0.000	0.000	0.000	0.000	0.000	0.055	0.051	0.000	0.021	0.000
90^thp	0.289	0.108	0.032	0.230	0.914	1.158	1.541	0.901	1.504	0.000
Stdev	0.389	0.094	0.059	0.142	0.482	0.545	0.593	0.692	0.716	0.004
Prev(%)	50.676	36.486	14.865	62.838	87.162	94.595	94.595	84.459	90.541	2.098

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