Order: Lactobacillales
Download OptionsLower rank member(s): [Family:Aerococcaceae] [Family:Carnobacteriaceae] [Family:Enterococcaceae] [Family:Lactobacillaceae] [Family:Streptococcaceae]
Genera:
LINKS: Ecology Home
| Life Page: Lactobacillales
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 14.803 | 17.016 | 54.796 | 54.523 | 47.463 | 16.739 | 24.468 | 22.638 | 21.454 | 7.490 | 1.407 | 1.381 | 8.321 | 7.681 | 82.883 | 88.365 | 91.317 | 21.149 |
| 10thp | 5.128 | 6.552 | 30.447 | 35.846 | 24.515 | 4.073 | 7.900 | 6.857 | 8.579 | 0.262 | 0.024 | 0.017 | 0.698 | 0.665 | 45.132 | 72.931 | 77.568 | 3.314 |
| 90thp | 27.978 | 28.490 | 77.612 | 75.297 | 71.061 | 29.714 | 47.187 | 45.117 | 39.099 | 20.706 | 4.202 | 2.945 | 18.311 | 18.117 | 98.988 | 99.367 | 99.917 | 43.690 |
| Stdev | 11.145 | 9.023 | 18.620 | 15.333 | 16.839 | 10.750 | 15.715 | 16.214 | 11.457 | 10.972 | 2.517 | 3.665 | 12.090 | 7.749 | 24.104 | 20.480 | 21.187 | 16.734 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 99.231 | 100.000 | 100.000 | 100.000 | 99.000 | 94.253 | 92.068 | 97.701 | 98.157 | 100.000 | 100.000 | 100.000 | 100.000 |
HMP 16S RefSeq (V3-V5) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 5.861 | 8.835 | 8.917 | 8.244 | 7.574 | 3.094 | 2.908 | 2.870 | 3.986 | 4.309 | 1.843 | 1.690 | 3.313 | 4.134 | 80.914 | 86.937 | 87.659 | 1.496 |
| 10thp | 1.276 | 2.677 | 2.064 | 2.527 | 2.360 | 0.842 | 0.506 | 0.583 | 0.807 | 0.028 | 0.000 | 0.000 | 0.000 | 0.000 | 18.878 | 45.194 | 36.003 | 0.069 |
| 90thp | 12.750 | 17.475 | 17.960 | 15.054 | 14.801 | 5.842 | 6.141 | 5.690 | 8.477 | 13.226 | 3.052 | 2.757 | 8.493 | 8.597 | 99.536 | 99.913 | 99.979 | 3.652 |
| Stdev | 5.658 | 6.447 | 7.784 | 5.632 | 5.693 | 2.432 | 2.721 | 2.984 | 3.680 | 8.759 | 8.248 | 8.222 | 7.051 | 10.171 | 29.819 | 26.368 | 28.786 | 2.809 |
| Prev(%) | 100.000 | 100.000 | 99.753 | 100.000 | 99.744 | 100.000 | 99.688 | 100.000 | 99.513 | 92.720 | 77.389 | 73.457 | 88.966 | 89.333 | 99.425 | 99.454 | 98.953 | 95.864 |
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 21.590 | 32.338 | 60.494 | 59.163 | 51.552 | 46.158 | 41.410 | 40.436 | 44.095 | 1.034 |
| 10thp | 3.615 | 16.560 | 30.746 | 34.017 | 31.393 | 19.959 | 21.224 | 15.466 | 21.221 | 0.004 |
| 90thp | 47.628 | 54.452 | 89.937 | 84.963 | 77.771 | 76.565 | 64.042 | 64.516 | 75.877 | 3.129 |
| Stdev | 16.511 | 14.997 | 22.734 | 18.457 | 19.329 | 22.815 | 16.415 | 20.430 | 21.794 | 1.941 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 90.000 |
HMP Metaphlan (not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 7.806 | 8.596 | 3.779 | 38.270 | 36.802 | 43.780 | 11.280 | 8.149 | 10.554 | 14.150 | 8.112 | 0.356 | 0.500 | 8.280 | 85.588 | 83.449 | 82.887 | 0.185 |
| 10thp | 1.638 | 2.340 | 0.193 | 13.714 | 17.410 | 43.780 | 5.692 | 2.595 | 3.246 | 4.740 | 0.000 | 0.000 | 0.000 | 8.280 | 76.050 | 27.148 | 15.005 | 0.000 |
| 90thp | 14.197 | 15.860 | 12.703 | 72.014 | 59.070 | 43.780 | 16.362 | 14.935 | 16.476 | 25.865 | 25.234 | 1.111 | 0.573 | 8.280 | 99.490 | 99.283 | 100.000 | 0.250 |
| Stdev | 5.957 | 7.191 | 5.069 | 23.166 | 16.343 | 0.000 | 5.357 | 5.580 | 13.443 | 9.411 | 14.705 | 0.801 | 1.830 | 0.000 | 28.535 | 33.724 | 32.062 | 1.503 |
| Prev(%) | 100.000 | 100.000 | 95.833 | 100.000 | 99.734 | 100.000 | 100.000 | 100.000 | 100.000 | 99.765 | 68.468 | 66.667 | 62.500 | 100.000 | 100.000 | 100.000 | 100.000 | 53.636 |
Eren V1-V3 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 16.989 | 19.616 | 63.721 | 62.532 | 55.072 | 19.369 | 31.652 | 32.957 | 28.524 | 0.074 |
| 10thp | 5.904 | 8.416 | 37.208 | 40.895 | 34.275 | 5.059 | 9.919 | 9.402 | 11.079 | 0.000 |
| 90thp | 31.783 | 34.734 | 85.607 | 83.345 | 78.437 | 34.088 | 55.888 | 60.978 | 49.219 | 0.224 |
| Stdev | 12.135 | 10.367 | 18.602 | 16.171 | 16.500 | 11.533 | 18.260 | 20.908 | 14.202 | 0.107 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 98.701 | 100.000 | 100.000 | 100.000 | 63.636 |
Eren V3-V5 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 12.064 | 16.121 | 49.829 | 55.420 | 45.457 | 15.551 | 29.052 | 26.010 | 24.415 | 0.036 |
| 10thp | 2.640 | 5.492 | 25.032 | 32.400 | 24.466 | 6.105 | 8.028 | 7.767 | 7.919 | 0.000 |
| 90thp | 27.530 | 32.217 | 74.295 | 76.908 | 71.738 | 26.517 | 55.588 | 50.706 | 45.861 | 0.110 |
| Stdev | 9.427 | 10.727 | 18.637 | 16.587 | 17.211 | 8.447 | 17.868 | 16.923 | 14.859 | 0.068 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 47.552 |
