HOMD ::Phylum:Patescibacteria

Phylum: Patescibacteria

Full Lineage: Bacteria; Patescibacteria Each rank name is a link to abundance plots at that rank:

Lower rank member(s): [Class:Patescibacteria [C1]] [Class:Saccharimonadia]
Genera:

LINKS: Ecology Home | Life Page: Patescibacteria

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

HMP 16S RefSeq (V1-V3) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	2.908	2.234	0.536	0.500	0.849	10.807	1.758	2.053	1.954	0.023	0.050	0.028	0.139	0.065	0.000	0.000	0.000	0.000
10^thp	0.183	0.041	0.000	0.006	0.011	1.072	0.088	0.193	0.046	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	6.722	5.759	1.162	1.092	2.028	25.557	4.153	6.175	4.566	0.036	0.028	0.010	0.166	0.112	0.000	0.000	0.000	0.000
Stdev	3.914	2.575	1.679	1.030	0.998	11.416	1.921	2.643	3.004	0.113	0.308	0.224	0.678	0.244	0.000	0.000	0.000	0.000
Prev(%)	98.013	93.377	70.629	89.726	90.604	98.462	95.238	98.667	96.774	20.000	21.552	11.331	24.138	21.659	0.000	0.000	0.000	0.000

HMP 16S RefSeq (V3-V5) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.140	0.201	0.000	0.000	0.016	0.464	0.035	0.024	0.026	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.423	0.534	0.000	0.000	0.049	1.159	0.096	0.070	0.075	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.291	0.437	0.000	0.000	0.042	0.833	0.076	0.061	0.061	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	63.210	64.634	0.000	0.000	25.320	84.226	42.991	36.010	40.876	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	4.890	3.132	0.534	0.451	0.311	1.096	1.170	1.411	0.567	0.003
10^thp	0.030	0.037	0.002	0.007	0.016	0.042	0.094	0.065	0.005	0.000
90^thp	15.545	6.776	2.363	0.929	0.661	1.740	3.419	3.000	1.345	0.001
Stdev	7.024	5.911	1.044	0.929	0.473	2.457	1.393	2.099	0.782	0.009
Prev(%)	97.297	100.000	93.023	100.000	96.429	100.000	100.000	100.000	95.000	10.000

HMP Metaphlan (not published)

No Notes

Eren V1-V3 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	3.048	2.435	0.284	0.396	0.785	12.175	2.373	1.903	2.155	0.007
10^thp	0.025	0.018	0.000	0.000	0.045	1.359	0.136	0.068	0.062	0.000
90^thp	6.793	6.680	1.118	0.836	1.788	30.689	6.017	5.067	5.768	0.027
Stdev	4.658	3.308	0.708	0.723	0.786	12.868	2.507	2.698	2.581	0.025
Prev(%)	92.208	89.610	51.948	83.117	94.805	98.701	94.805	97.403	92.208	14.286

Eren V3-V5 www.pnas.org

No Notes

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