Species: Haemophilus sp. HMT-036 (HMT-036)
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org
(data from healthy subjects)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.016 | 0.011 | 1.306 | 0.334 | 0.082 | 0.085 | 0.026 | 0.022 | 0.004 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.047 | 0.024 | 4.193 | 0.805 | 0.246 | 0.216 | 0.094 | 0.063 | 0.000 | 0.000 |
| Stdev | 0.047 | 0.044 | 2.406 | 0.713 | 0.179 | 0.217 | 0.057 | 0.052 | 0.016 | 0.000 |
| Prev(%) | 20.779 | 19.481 | 80.519 | 76.623 | 55.844 | 48.052 | 29.870 | 35.065 | 7.792 | 0.000 |
Eren V3-V5 www.pnas.org
(data from healthy subjects)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.033 | 0.030 | 1.469 | 0.605 | 0.138 | 0.190 | 0.117 | 0.177 | 0.012 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.068 | 0.039 | 3.669 | 1.619 | 0.334 | 0.418 | 0.163 | 0.579 | 0.044 | 0.000 |
| Stdev | 0.127 | 0.135 | 4.588 | 1.513 | 0.466 | 0.540 | 0.612 | 0.519 | 0.034 | 0.000 |
| Prev(%) | 19.595 | 16.892 | 50.676 | 50.000 | 31.081 | 48.649 | 38.514 | 33.108 | 19.595 | 0.000 |
Human Microbiome Project 16S RefSeq (V1-V3) (not published)
(data from healthy subjects)
Notes:
Reads equidistant to HMT-036 and HMT-851 were assigned to each taxon in proportion to the abundance of HMT-036 and HMT-851 individually at these body sites (AKE, BMU).
Reads equidistant to HMT-036 and HMT-851 were assigned to each taxon in proportion to the abundance of HMT-036 and HMT-851 individually at these body sites (AKE, BMU).
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.129 | 0.063 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.292 | 0.098 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.000 | 0.407 | 0.300 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 0.000 | 0.000 | 44.056 | 25.342 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Human Microbiome Project 16S RefSeq (V3-V5) (not published)
(data from healthy subjects)
Notes:
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
Dewhirst (35x9) (not published)
Notes:
Reads equally close to HMT 036 and 851 were assigned half to each taxon.
Reads equally close to HMT 036, 851, and 908 were assigned one-third to each taxon.
Reads equally close to HMT 036 and 851 were assigned half to each taxon.
Reads equally close to HMT 036, 851, and 908 were assigned one-third to each taxon.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.054 | 0.030 | 2.418 | 0.570 | 0.258 | 0.012 | 0.063 | 0.048 | 0.082 | 0.005 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.028 | 0.084 | 6.419 | 0.842 | 0.536 | 0.053 | 0.125 | 0.200 | 0.156 | 0.000 |
| Stdev | 0.232 | 0.076 | 5.664 | 1.968 | 0.711 | 0.022 | 0.187 | 0.100 | 0.247 | 0.021 |
| Prev(%) | 55.405 | 41.176 | 76.744 | 85.714 | 75.000 | 52.000 | 78.788 | 51.613 | 50.000 | 5.000 |
Human Microbiome Project Metaphlan (not published)
(data from healthy subjects)
No Notes
