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Taxonomy: V4.2   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.02   |  Viruses: V1.2

Species: Klebsiella pneumoniae (HMT-731)

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Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella pneumoniae
Each rank name is a link to abundance plots at that rank:
Hide Legend
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org (data from healthy subjects)
No Notes

Eren V3-V5 www.pnas.org (data from healthy subjects)
No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0000.0000.0000.0000.0220.0000.1040.0000.0000.0210.0070.0210.1180.0380.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0000.0000.0000.2250.0001.8650.0000.0000.1310.0620.2931.1440.4260.0000.0000.0000.000
Prev(%)0.0000.0000.0000.0006.0400.0003.2740.0000.00010.0006.0343.9666.8978.2950.0000.0000.0000.000
Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)
Notes:
Neither HMT-731 nor HMT-865 were present singularly so these reads were split evenly at this site (RAF).


SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0000.0130.0000.0000.0000.0000.2690.0000.0000.3350.0000.0000.1650.0800.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.1370.0000.0000.0580.0900.0000.0000.0000.000
Stdev0.0000.1740.0000.0000.0000.0004.5440.0000.0002.5210.0000.0001.2280.5180.0000.0000.0000.000
Prev(%)0.0002.9270.0000.0000.0000.0003.1150.0000.00022.9890.0000.00019.31031.3330.0000.0000.0000.000
Dewhirst (35x9) (not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)0.0000.0000.0000.0003.5710.0000.0000.0000.0000.000
Human Microbiome Project Metaphlan (not published) (data from healthy subjects)
No Notes

SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.0000.0000.0000.0000.0000.0000.0003.4240.0000.0000.0770.0000.0000.0000.0000.0000.0000.003
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0000.0000.0000.0000.0000.00013.6970.0000.0000.6150.0000.0000.0000.0000.0000.0000.026
Prev(%)0.0000.0000.0000.0000.0000.0000.0006.2500.0000.0004.9550.0000.0000.0000.0000.0000.0002.364