HOMD ::species::Leptotrichia hofstadii

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Leptotrichia hofstadii

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Full Lineage: Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Leptotrichiaceae; Leptotrichia; Leptotrichia hofstadii

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to L. hofstadii and L. sp. HMT 909 were assigned half to each taxon

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.035	0.090	0.003	0.029	0.003	0.007	0.002	0.003	0.001	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.096	0.247	0.000	0.013	0.009	0.017	0.002	0.010	0.000	0.000
Stdev	0.089	0.237	0.019	0.204	0.011	0.021	0.008	0.008	0.005	0.000
Prev	29.870	40.260	6.494	19.481	14.286	18.182	10.390	15.584	9.091	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to L. hofstadii and L. sp. HMT 909 were assigned half to each taxon.

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.203	0.414	0.014	0.031	0.010	0.031	0.009	0.014	0.008	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.563	1.352	0.010	0.078	0.036	0.093	0.029	0.044	0.020	0.000
Stdev	0.423	0.666	0.087	0.075	0.022	0.050	0.020	0.032	0.027	0.000
Prev	68.243	72.297	11.486	48.649	28.378	48.649	28.378	34.459	25.676	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	0.378	1.200	0.036	0.127	0.081	0.009	0.015	0.007	0.005	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.717	3.431	0.109	0.371	0.144	0.021	0.025	0.020	0.021	0.000
Stdev	1.246	2.528	0.091	0.247	0.233	0.013	0.034	0.011	0.009	0.000
Prev	88.571	82.353	52.778	67.647	75.000	58.333	63.636	48.387	44.118	0.000