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Taxonomy: V4.2   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.02   |  Viruses: V1.2

Species: Neisseria sp. HMT-018 (HMT-018)

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Full Lineage: Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria sp. HMT-018
Each rank name is a link to abundance plots at that rank:
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Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org (data from healthy subjects)
No Notes

Eren V3-V5 www.pnas.org (data from healthy subjects)
No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.1490.0300.0000.0000.0000.0130.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.1800.0410.0000.0000.0000.0010.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.6900.1570.0000.0000.0000.0690.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)22.51719.8680.0000.0000.00010.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.1170.2130.0000.0480.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.1470.3180.0000.0310.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.5261.1440.0000.6100.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)21.23526.3410.00012.6550.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Dewhirst (35x9) (not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0460.0080.0010.0010.0020.0020.0010.0000.0010.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0080.0050.0000.0000.0020.0030.0000.0000.0010.000
Stdev0.3050.0330.0040.0060.0090.0100.0040.0010.0040.000
Prev(%)17.56817.6476.9778.57117.85714.0006.0616.45212.5000.000
Human Microbiome Project Metaphlan (not published) (data from healthy subjects)
No Notes