HOMD ::species::Parvimonas sp._HMT_393

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Parvimonas sp._HMT_393

Download Options

Full Lineage: Bacteria; Firmicutes; Tissierellia; Tissierellales; Peptoniphilaceae; Parvimonas; Parvimonas sp._HMT_393

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.001	0.000	0.003	0.003	0.033	0.023	0.036	0.021	0.049	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.004	0.132	0.065	0.105	0.051	0.086	0.000
Stdev	0.008	0.000	0.016	0.010	0.075	0.079	0.109	0.066	0.149	0.000
Prev	1.299	0.000	5.195	10.390	29.870	18.182	19.481	19.481	25.974	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to P. micra, P. sp. HMT 110, and P. sp. HMT 393 were assigned one-third to each taxon.

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.198	0.048	0.008	0.022	0.080	0.057	0.075	0.138	0.064	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.500	0.119	0.007	0.063	0.223	0.150	0.171	0.306	0.175	0.000
Stdev	0.226	0.065	0.041	0.039	0.125	0.069	0.158	0.268	0.114	0.002
Prev	87.838	68.919	13.514	55.405	68.243	75.676	72.297	80.405	56.757	2.098

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 111 and 393 were assigned half to each taxon.

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	0.020	0.007	0.014	0.012	0.039	0.201	0.046	0.049	0.074	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.052	0.012	0.033	0.030	0.147	0.471	0.168	0.152	0.207	0.000
Stdev	0.042	0.020	0.035	0.020	0.076	0.461	0.077	0.086	0.156	0.000
Prev	74.286	47.059	41.667	61.765	60.714	69.444	72.727	67.742	55.882	0.000