Species: Segatella sp. HMT-300 (HMT-300)
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org
(data from healthy subjects)
No Notes
Eren V3-V5 www.pnas.org
(data from healthy subjects)
Notes:
Reads equally close to P. sp. HMT 292, 293, and 300 were assigned one-third to each taxon.
Reads equally close to P. sp. HMT 292, 293, and 300 were assigned one-third to each taxon.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.084 | 0.042 | 0.000 | 0.009 | 0.009 | 0.032 | 0.003 | 0.010 | 0.003 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.245 | 0.105 | 0.000 | 0.023 | 0.014 | 0.084 | 0.009 | 0.030 | 0.004 | 0.000 |
| Stdev | 0.182 | 0.108 | 0.000 | 0.025 | 0.045 | 0.077 | 0.009 | 0.027 | 0.020 | 0.000 |
| Prev(%) | 62.162 | 38.514 | 0.000 | 26.351 | 20.270 | 56.081 | 16.216 | 27.027 | 10.811 | 0.000 |
Human Microbiome Project 16S RefSeq (V1-V3) (not published)
(data from healthy subjects)
No Notes
Human Microbiome Project 16S RefSeq (V3-V5) (not published)
(data from healthy subjects)
Notes:
HMTs292-293-300 were not present singularly so these reads were split evenly at this body site (SUBP)
Neither HMT-292 nor HMT-300 were present singularly so these reads were split evenly at this site (SUPP).
HMTs292-293-300 were not present singularly so these reads were split evenly at this body site (SUBP)
Neither HMT-292 nor HMT-300 were present singularly so these reads were split evenly at this site (SUPP).
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.073 | 0.025 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.195 | 0.068 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.169 | 0.077 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 61.975 | 34.878 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.241 | 0.134 | 0.014 | 0.025 | 0.004 | 0.010 | 0.003 | 0.004 | 0.001 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.656 | 0.228 | 0.017 | 0.038 | 0.010 | 0.030 | 0.008 | 0.006 | 0.000 | 0.000 |
| Stdev | 0.694 | 0.437 | 0.074 | 0.075 | 0.008 | 0.022 | 0.004 | 0.012 | 0.002 | 0.000 |
| Prev(%) | 67.568 | 70.588 | 27.907 | 51.429 | 42.857 | 48.000 | 42.424 | 32.258 | 10.000 | 0.000 |
Human Microbiome Project Metaphlan (not published)
(data from healthy subjects)
No Notes
