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Taxonomy: V4.2   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.02   |  Viruses: V1.2

Species: Selenomonas sp. HMT-388 (HMT-388)

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Full Lineage: Bacteria; Bacillota; Negativicutes; Selenomonadales; Selenomonadaceae; Selenomonas; Selenomonas sp. HMT-388
Each rank name is a link to abundance plots at that rank:
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Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org (data from healthy subjects)
No Notes

Eren V3-V5 www.pnas.org (data from healthy subjects)
Notes:
Reads equally close to S. flueggei, S. noxia, and S. sp. HMT 388 were assigned one-third to each taxon.




SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.2300.2510.0040.0150.0050.0970.0110.0100.0020.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.6190.6740.0010.0420.0140.1950.0280.0250.0070.000
Stdev0.3150.3120.0250.0350.0170.1710.0310.0320.0060.001
Prev(%)84.45980.40510.13541.89225.67681.75733.10834.45915.5410.699
Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)
No Notes

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)
No Notes

Dewhirst (35x9) (not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)0.0000.0000.0000.0000.0000.0003.0303.2260.0000.000
Human Microbiome Project Metaphlan (not published) (data from healthy subjects)
No Notes