HOMD ::Species:Stomatobaculum longum

Species: Stomatobaculum longum (HMT-419)

Full Lineage: Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Stomatobaculum; Stomatobaculum longum Each rank name is a link to abundance plots at that rank:

LINKS: Ecology Home | HMT-419: Body Sites Data | HMT-419: Taxon Description | Life Page: Stomatobaculum longum

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.017	0.013	0.003	0.035	0.079	0.071	0.319	0.214	0.184	0.001
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.053	0.019	0.000	0.074	0.166	0.196	0.939	0.471	0.549	0.000
Stdev	0.052	0.055	0.017	0.084	0.196	0.150	0.567	0.531	0.341	0.006
Prev(%)	25.974	19.481	5.195	38.961	48.052	41.558	63.636	54.545	53.247	5.195

Eren V3-V5 www.pnas.org (data from healthy subjects)

Notes:
Reads equally close to S. longum and S. sp. HMT 910 were assigned half to each taxon.

Reads equally close to S. longum, S. sp. HMT 097, and S. sp. HMT 910 were assigned one-third to each taxon.

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.019	0.020	0.007	0.047	0.134	0.106	0.307	0.251	0.271	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.016	0.000	0.000	0.000
90^thp	0.048	0.045	0.018	0.117	0.317	0.251	0.828	0.624	0.628	0.000
Stdev	0.062	0.070	0.023	0.080	0.216	0.144	0.463	0.399	0.436	0.000
Prev(%)	35.135	31.081	22.297	64.189	85.811	89.189	91.216	85.811	87.838	0.000

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.044	0.000	0.023	0.138	0.446	0.302	0.827	0.769	0.890	0.012	0.010	0.000	0.050	0.031	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.053	0.085	0.045	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.079	0.000	0.059	0.320	0.989	0.735	1.974	1.510	1.974	0.013	0.000	0.000	0.026	0.034	0.000	0.000	0.000	0.000
Stdev	0.180	0.000	0.059	0.221	0.625	0.426	0.773	0.828	1.077	0.073	0.089	0.000	0.299	0.156	0.000	0.000	0.000	0.000
Prev(%)	44.371	0.000	37.063	79.452	88.591	77.692	94.345	96.000	94.839	11.667	7.759	0.000	10.920	11.521	0.000	0.000	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.069	0.052	0.000	0.131	0.381	0.202	0.847	0.677	0.798	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.168	0.103	0.000	0.344	1.228	0.564	2.645	1.991	2.474	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.239	0.172	0.000	0.342	0.782	0.395	1.393	1.282	1.458	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	44.691	42.927	0.000	44.417	53.197	59.821	66.978	63.260	63.990	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.075	0.070	0.059	0.021	0.019	0.101	0.071	0.090	0.105	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.104	0.182	0.123	0.054	0.045	0.201	0.184	0.244	0.284	0.000
Stdev	0.266	0.144	0.173	0.051	0.041	0.213	0.100	0.140	0.197	0.000
Prev(%)	51.351	58.824	53.488	65.714	67.857	76.000	87.879	80.645	77.500	0.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.031	0.015	0.164	0.007	0.037	0.010	0.070	0.117	0.276	0.355	0.001	0.000	0.000	0.000	0.000	0.000	0.000	0.001
10^thp	0.000	0.000	0.000	0.000	0.000	0.010	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.115	0.040	0.555	0.018	0.080	0.010	0.196	0.485	0.382	1.035	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.064	0.058	0.299	0.020	0.134	0.000	0.171	0.209	0.879	0.660	0.017	0.000	0.000	0.000	0.000	0.000	0.000	0.021
Prev(%)	33.333	20.707	50.000	17.647	20.745	100.000	25.000	50.000	52.000	61.502	0.901	0.000	0.000	0.000	0.000	0.000	0.000	0.545

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