Species: Streptococcus sp. HMT-423 (HMT-423)
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
HMP 16S RefSeq (V3-V5) (not published)
No Notes
Dewhirst (35x9) (not published)
** View Notes (mouse over) **
Notes:
Reads equally close to numerous Streptococcus taxa in the mitis/oralis/infantis cluster were divided equally among taxa except not assigned to S. pneumoniae.
Reads equally close to numerous Streptococcus taxa in the mitis/oralis/infantis cluster were divided equally among taxa except not assigned to S. pneumoniae.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 2.101 | 2.939 | 5.951 | 5.438 | 1.929 | 1.882 | 1.644 | 1.655 | 2.524 | 0.026 |
| 10thp | 0.105 | 0.440 | 0.273 | 1.642 | 0.288 | 0.210 | 0.135 | 0.082 | 0.063 | 0.000 |
| 90thp | 6.069 | 6.910 | 14.995 | 9.926 | 4.068 | 3.745 | 4.313 | 5.363 | 11.207 | 0.046 |
| Stdev | 2.517 | 2.765 | 5.956 | 3.723 | 1.646 | 3.135 | 2.024 | 2.465 | 5.151 | 0.067 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 45.000 |
HMP Metaphlan (not published)
No Notes
Eren V1-V3 www.pnas.org
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Notes:
reads equally close to S. infantis, S. mitis, S. oralis, S. australis, S. cristatus, S. parasanguinis clade 721, S. pneumoniae, and S. sp. HMT 061, 064, 066, 074, 423 were divided equally among taxa except not assigned to S. pneumoniae
reads equally close to S. infantis, S. mitis, S. oralis, S. australis, S. cristatus, S. parasanguinis clade 721, S. pneumoniae, and S. sp. HMT 061, 064, 066, 074, 423 were divided equally among taxa except not assigned to S. pneumoniae
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.688 | 0.756 | 4.764 | 4.649 | 3.280 | 0.789 | 1.410 | 1.603 | 0.601 | 0.003 |
| 10thp | 0.121 | 0.200 | 2.595 | 2.124 | 1.203 | 0.174 | 0.164 | 0.208 | 0.131 | 0.000 |
| 90thp | 1.481 | 1.612 | 6.873 | 7.260 | 5.880 | 1.447 | 3.628 | 4.429 | 1.309 | 0.009 |
| Stdev | 0.934 | 0.566 | 1.800 | 1.915 | 1.770 | 0.579 | 1.512 | 1.784 | 0.487 | 0.004 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 97.403 | 100.000 | 100.000 | 100.000 | 49.351 |
Eren V3-V5 www.pnas.org
** View Notes (mouse over) **
Notes:
Reads equally close to S. mitis, S. infantis, S. lactarius, S. oralis, S. peroris, and S. sp. HMT 061, 064, 074, and 423 were divided equally among taxa.
Reads equally close to S. mitis, S. infantis, S. lactarius, S. oralis, S. peroris, and S. sp. HMT 061, 064, 074, and 423 were divided equally among taxa.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.467 | 0.670 | 2.381 | 2.608 | 1.036 | 0.299 | 0.638 | 0.617 | 0.104 | 0.000 |
| 10thp | 0.076 | 0.170 | 0.634 | 0.767 | 0.249 | 0.084 | 0.046 | 0.044 | 0.012 | 0.000 |
| 90thp | 0.960 | 1.337 | 4.596 | 4.710 | 2.263 | 0.565 | 1.589 | 1.597 | 0.214 | 0.001 |
| Stdev | 0.412 | 0.500 | 1.657 | 1.496 | 0.882 | 0.249 | 0.938 | 0.841 | 0.131 | 0.002 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 97.973 | 11.888 |
