HOMD ::species::Treponema sp._HMT_253

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Treponema sp._HMT_253

Download Options

Full Lineage: Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; Treponema sp._HMT_253

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.017	0.009	0.000	0.001	0.000	0.001	0.000	0.033	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.080	0.037	0.000	0.005	0.000	0.009	0.003	0.269	0.000	0.000
Prev	7.792	7.792	0.000	2.597	0.000	1.299	1.299	3.896	0.000	0.000

From: Eren et al.(2014) (V3-V5)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.040	0.015	0.001	0.002	0.001	0.010	0.005	0.026	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.054	0.000	0.000	0.000	0.000	0.000	0.000	0.034	0.000	0.000
Stdev	0.161	0.077	0.008	0.015	0.005	0.055	0.024	0.156	0.003	0.000
Prev	14.865	6.081	0.676	3.378	2.027	7.432	6.081	12.162	0.676	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	0.006	0.001	0.000	0.000	0.000	0.000	0.000	0.001	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.004	0.000	0.000
Stdev	0.039	0.002	0.000	0.001	0.000	0.002	0.002	0.004	0.000	0.000
Prev	8.571	8.824	0.000	5.882	0.000	2.778	6.061	12.903	0.000	0.000