HOMD ::species::Treponema vincentii

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Treponema vincentii

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Full Lineage: Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; Treponema vincentii

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to T. medium and T. vincentii were assigned half to each taxon

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.018	0.010	0.000	0.003	0.007	0.011	0.017	0.017	0.018	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.067	0.006	0.000	0.002	0.019	0.037	0.064	0.056	0.045	0.000
Stdev	0.050	0.045	0.001	0.010	0.018	0.025	0.041	0.044	0.047	0.000
Prev	20.779	10.390	2.597	10.390	22.078	28.571	27.273	25.974	28.571	1.299

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to T. vincentii and T. sp. HMT 231 were assigned half to each taxon.

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.214	0.062	0.002	0.014	0.007	0.027	0.033	0.070	0.011	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.572	0.199	0.000	0.026	0.020	0.081	0.054	0.148	0.032	0.000
Stdev	0.443	0.168	0.008	0.064	0.021	0.045	0.155	0.227	0.029	0.000
Prev	52.703	39.865	6.081	25.676	22.297	48.649	37.162	46.622	27.703	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	0.037	0.001	0.012	0.001	0.009	0.005	0.017	0.017	0.007	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.021	0.004	0.031	0.002	0.001	0.019	0.032	0.042	0.016	0.000
Stdev	0.255	0.004	0.036	0.003	0.044	0.012	0.051	0.038	0.021	0.000
Prev	34.286	20.588	16.667	17.647	14.286	22.222	42.424	54.839	32.353	0.000