Genome Explorer: Stenotrophomonas maltophilia D457 (SEQF2300.1)
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NCBI Annotation for SEQF2300.1
| Genome selected: Stenotrophomonas maltophilia D457 | |||
| Contigs: | 1 | Bases: | 4769156 bps |
| CDS: | 29 | rRNA: | 13 |
| tmRNA: | 1 | tRNA: | 72 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 4001 | HE798556.1 | CCH14611.1 | open | 258 [NA] | 85 [AA] | 4610972-4611229 | SMD_4105 | Acyl carrier protein (ACP1) |
| 4002 | HE798556.1 | CCH14612.1 | open | 798 [NA] | 265 [AA] | 4611216-4612013 | SMD_4106 | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
| 4003 | HE798556.1 | CCH14613.1 | open | 744 [NA] | 247 [AA] | 4612006-4612749 | SMD_4107 | 3-oxoacyl-[ACP] synthase |
| 4004 | HE798556.1 | CCH14614.1 | open | 1014 [NA] | 337 [AA] | 4612968-4613981 | SMD_4108 | putative Cytochrome bd2, subunit II |
| 4005 | HE798556.1 | CCH14615.1 | open | 1398 [NA] | 465 [AA] | 4613983-4615380 | SMD_4109 | putative Cytochrome bd2, subunit I |
| 4006 | HE798556.1 | CCH14616.1 | open | 216 [NA] | 71 [AA] | 4615594-4615809 | SMD_4110 | hypothetical protein |
| 4007 | HE798556.1 | CCH14617.1 | open | 654 [NA] | 217 [AA] | 4615806-4616459 | SMD_4111 | RNA polymerase ECF-type sigma factor |
| 4008 | HE798556.1 | CCH14618.1 | open | 330 [NA] | 109 [AA] | 4616497-4616826 | SMD_4112 | hypothetical protein |
| 4009 | HE798556.1 | CCH14619.1 | open | 453 [NA] | 150 [AA] | 4616897-4617349 | SMD_4113 | hypothetical protein |
| 4010 | HE798556.1 | CCH14620.1 | open | 2358 [NA] | 785 [AA] | 4617520-4619877 | SMD_4114 | Dipeptidyl-peptidase |
| 4011 | HE798556.1 | CCH14621.1 | open | 420 [NA] | 139 [AA] | 4619874-4620293 | SMD_4115 | Nudix hydrolase family protein PA3470 |
| 4012 | HE798556.1 | CCH14622.1 | open | 561 [NA] | 186 [AA] | 4620324-4620884 | SMD_4116 | hypothetical protein |
| 4013 | HE798556.1 | CCH14623.1 | open | 966 [NA] | 321 [AA] | 4620920-4621885 | SMD_4117 | hypothetical protein |
| 4014 | HE798556.1 | CCH14624.1 | open | 1614 [NA] | 537 [AA] | 4621923-4623536 | SMD_4118 | hypothetical protein |
| 4015 | HE798556.1 | CCH14625.1 | open | 897 [NA] | 298 [AA] | 4623590-4624486 | SMD_4119 | Coproporphyrinogen III oxidase, aerobic |
| 4016 | HE798556.1 | CCH14626.1 | open | 1521 [NA] | 506 [AA] | 4624583-4626103 | SMD_4120 | hypothetical protein |
| 4017 | HE798556.1 | CCH14627.1 | open | 480 [NA] | 159 [AA] | 4626148-4626627 | SMD_4121 | conserved hypothetical protein |
| 4018 | HE798556.1 | CCH14628.1 | open | 2775 [NA] | 924 [AA] | 4626997-4629771 | SMD_4122 | DNA polymerase I |
| 4019 | HE798556.1 | CCH14629.1 | open | 285 [NA] | 94 [AA] | 4629869-4630153 | SMD_4123 | hypothetical protein |
| 4020 | HE798556.1 | CCH14630.1 | open | 447 [NA] | 148 [AA] | 4630323-4630769 | SMD_4124 | putative universal stress protein |
| 4021 | HE798556.1 | CCH14631.1 | open | 555 [NA] | 184 [AA] | 4631071-4631625 | SMD_4125 | hypothetical protein |
| 4022 | HE798556.1 | CCH14632.1 | open | 327 [NA] | 108 [AA] | 4631732-4632058 | SMD_4126 | cellular communication/signal transduction |
| 4023 | HE798556.1 | CCH14633.1 | open | 2193 [NA] | 730 [AA] | 4633010-4635202 | SMD_4127 | ATP-dependent DNA helicase UvrD/PcrA |
| 4024 | HE798556.1 | CCH14634.1 | open | 1422 [NA] | 473 [AA] | 4635212-4636633 | SMD_4128 | hypothetical protein |
| 4025 | HE798556.1 | CCH14635.1 | open | 1419 [NA] | 472 [AA] | 4636679-4638097 | SMD_4129 | Cardiolipin synthetase |
| 4026 | HE798556.1 | CCH14636.1 | open | 165 [NA] | 54 [AA] | 4638927-4639091 | SMD_4131 | LSU ribosomal protein L33p |
| 4027 | HE798556.1 | CCH14637.1 | open | 204 [NA] | 67 [AA] | 4639105-4639308 | SMD_4132 | LSU ribosomal protein L28p |
| 4028 | HE798556.1 | CCH14638.1 | open | 1215 [NA] | 404 [AA] | 4639622-4640836 | SMD_4133 | UDP-glucose:sterol glucosyltransferase |
| 4029 | HE798556.1 | CCH14639.1 | open | 510 [NA] | 169 [AA] | 4640850-4641359 | SMD_4134 | DNA polymerase III epsilon subunit |
| 4030 | HE798556.1 | CCH14640.1 | open | 894 [NA] | 297 [AA] | 4641506-4642399 | SMD_4135 | Transcriptional regulator, LysR family |
| 4031 | HE798556.1 | CCH14641.1 | open | 390 [NA] | 129 [AA] | 4642508-4642897 | SMD_4136 | Putative translation initiation inhibitor, yjgF family |
| 4032 | HE798556.1 | CCH14642.1 | open | 333 [NA] | 110 [AA] | 4643139-4643471 | SMD_4137 | hypothetical protein |
| 4033 | HE798556.1 | CCH14643.1 | open | 1254 [NA] | 417 [AA] | 4643528-4644781 | SMD_4138 | hypothetical protein |
| 4034 | HE798556.1 | CCH14644.1 | open | 1206 [NA] | 401 [AA] | 4644778-4645983 | SMD_4139 | hypothetical protein |
| 4035 | HE798556.1 | CCH14645.1 | open | 3210 [NA] | 1069 [AA] | 4645994-4649203 | SMD_4140 | Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA |
| 4036 | HE798556.1 | CCH14646.1 | open | 1773 [NA] | 590 [AA] | 4649299-4651071 | SMD_4141 | hypothetical protein |
| 4037 | HE798556.1 | CCH14647.1 | open | 348 [NA] | 115 [AA] | 4651285-4651632 | SMD_4142 | hypothetical protein |
| 4038 | HE798556.1 | CCH14648.1 | open | 723 [NA] | 240 [AA] | 4651632-4652354 | SMD_4143 | Dolichol-phosphate mannosyltransferase |
| 4039 | HE798556.1 | CCH14649.1 | open | 966 [NA] | 321 [AA] | 4652445-4653410 | SMD_4144 | Nucleotide sugar epimerase |
| 4040 | HE798556.1 | CCH14650.1 | open | 759 [NA] | 252 [AA] | 4653456-4654214 | SMD_4145 | Ankyrin repeats containing protein |
| 4041 | HE798556.1 | CCH14651.1 | open | 924 [NA] | 307 [AA] | 4654317-4655240 | SMD_4146 | Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J |
| 4042 | HE798556.1 | CCH14652.1 | open | 798 [NA] | 265 [AA] | 4655240-4656037 | SMD_4147 | Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj |
| 4043 | HE798556.1 | CCH14653.1 | open | 639 [NA] | 212 [AA] | 4656150-4656788 | SMD_4148 | rRNA small subunit methyltransferase, glucose inhibited division protein GidB |
| 4044 | HE798556.1 | CCH14654.1 | open | 600 [NA] | 199 [AA] | 4656828-4657427 | SMD_4149 | 4'-phosphopantetheinyl transferase |
| 4045 | HE798556.1 | CCH14655.1 | open | 252 [NA] | 83 [AA] | 4657512-4657763 | SMD_4150 | transglycosylase associated protein |
| 4046 | HE798556.1 | CCH14656.1 | open | 768 [NA] | 255 [AA] | 4657836-4658603 | SMD_4151 | Exodeoxyribonuclease III |
| 4047 | HE798556.1 | CCH14657.1 | open | 1410 [NA] | 469 [AA] | 4658796-4660205 | SMD_4152 | Aldehyde dehydrogenase |
| 4048 | HE798556.1 | CCH14658.1 | open | 1665 [NA] | 554 [AA] | 4660406-4662070 | SMD_4153 | putative sugar transport protein |
| 4049 | HE798556.1 | CCH14659.1 | open | 1413 [NA] | 470 [AA] | 4662297-4663709 | SMD_4154 | hypothetical protein |
| 4050 | HE798556.1 | CCH14660.1 | open | 1944 [NA] | 647 [AA] | 4663970-4665913 | SMD_4155 | Acetyl-coenzyme A synthetase |
| 4051 | HE798556.1 | CCH14661.1 | open | 666 [NA] | 221 [AA] | 4666024-4666689 | SMD_4156 | Transcriptional regulator, LuxR family |
| 4052 | HE798556.1 | CCH14662.1 | open | 576 [NA] | 191 [AA] | 4667394-4667969 | SMD_4157 | Integral membrane protein |
| 4053 | HE798556.1 | CCH14663.1 | open | 3459 [NA] | 1152 [AA] | 4668288-4671746 | SMD_4158 | Sensor histidine kinase |
| 4054 | HE798556.1 | CCH14664.1 | open | 2148 [NA] | 715 [AA] | 4671980-4674127 | SMD_4159 | hypothetical protein |
| 4055 | HE798556.1 | CCH14665.1 | open | 1689 [NA] | 562 [AA] | 4674254-4675942 | SMD_4160 | Chaperone protein hscC (Hsc62) |
| 4056 | HE798556.1 | CCH14666.1 | open | 408 [NA] | 135 [AA] | 4675900-4676307 | SMD_4161 | hypothetical protein |
| 4057 | HE798556.1 | CCH14667.1 | open | 1125 [NA] | 374 [AA] | 4676269-4677393 | SMD_4162 | hypothetical protein |
| 4058 | HE798556.1 | CCH14668.1 | open | 1248 [NA] | 415 [AA] | 4677390-4678637 | SMD_4163 | hypothetical protein |
| 4059 | HE798556.1 | CCH14669.1 | open | 3858 [NA] | 1285 [AA] | 4678649-4682506 | SMD_4164 | putative exported protein |
| 4060 | HE798556.1 | CCH14670.1 | open | 1827 [NA] | 608 [AA] | 4682503-4684329 | SMD_4165 | Outer membrane protein |
| 4061 | HE798556.1 | CCH14671.1 | open | 2076 [NA] | 691 [AA] | 4684513-4686588 | SMD_4166 | Glycyl-tRNA synthetase beta chain |
| 4062 | HE798556.1 | CCH14672.1 | open | 912 [NA] | 303 [AA] | 4686676-4687587 | SMD_4167 | Glycyl-tRNA synthetase alpha chain |
| 4063 | HE798556.1 | CCH14673.1 | open | 1836 [NA] | 611 [AA] | 4687671-4689506 | SMD_4168 | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
| 4064 | HE798556.1 | CCH14674.1 | open | 747 [NA] | 248 [AA] | 4689478-4690224 | SMD_4169 | GMP synthase [glutamine-hydrolyzing] |
| 4065 | HE798556.1 | CCH14675.1 | open | 912 [NA] | 303 [AA] | 4690274-4691185 | SMD_4170 | hypothetical protein |
| 4066 | HE798556.1 | CCH14676.1 | open | 750 [NA] | 249 [AA] | 4691271-4692020 | SMD_4171 | Twin-arginine translocation protein TatC |
| 4067 | HE798556.1 | CCH14677.1 | open | 453 [NA] | 150 [AA] | 4692017-4692469 | SMD_4172 | Twin-arginine translocation protein TatB |
| 4068 | HE798556.1 | CCH14678.1 | open | 228 [NA] | 75 [AA] | 4692485-4692712 | SMD_4173 | Twin-arginine translocation protein TatA |
| 4069 | HE798556.1 | CCH14679.1 | open | 894 [NA] | 297 [AA] | 4692788-4693681 | SMD_4174 | hypothetical protein |
| 4070 | HE798556.1 | CCH14680.1 | open | 972 [NA] | 323 [AA] | 4693838-4694809 | SMD_4175 | Ferrochelatase, protoheme ferro-lyase |
| 4071 | HE798556.1 | CCH14681.1 | open | 828 [NA] | 275 [AA] | 4694833-4695660 | SMD_4176 | hydrolase |
| 4072 | HE798556.1 | CCH14682.1 | open | 2106 [NA] | 701 [AA] | 4695951-4698056 | SMD_4177 | Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) |
| 4073 | HE798556.1 | CCH14683.1 | open | 231 [NA] | 76 [AA] | 4709624-4709854 | SMD_4188 | hypothetical protein |
| 4074 | HE798556.1 | CCH14684.1 | open | 1176 [NA] | 391 [AA] | 4709882-4711057 | SMD_4189 | Benzoate transport protein |
| 4075 | HE798556.1 | CCH14685.1 | open | 546 [NA] | 181 [AA] | 4711081-4711626 | SMD_4190 | hypothetical protein |
| 4076 | HE798556.1 | CCH14686.1 | open | 771 [NA] | 256 [AA] | 4711698-4712468 | SMD_4191 | hypothetical protein |
| 4077 | HE798556.1 | CCH14687.1 | open | 891 [NA] | 296 [AA] | 4712495-4713385 | SMD_4192 | Aldose 1-epimerase |
| 4078 | HE798556.1 | CCH14688.1 | open | 1248 [NA] | 415 [AA] | 4713447-4714694 | SMD_4193 | Membrane-bound lytic murein transglycosylase B precursor |
| 4079 | HE798556.1 | CCH14689.1 | open | 975 [NA] | 324 [AA] | 4714779-4715753 | SMD_4194 | hypothetical protein |
| 4080 | HE798556.1 | CCH14690.1 | open | 1308 [NA] | 435 [AA] | 4715750-4717057 | SMD_4195 | hypothetical protein |
| 4081 | HE798556.1 | CCH14691.1 | open | 1281 [NA] | 426 [AA] | 4717170-4718450 | SMD_4196 | GGDEF domain protein |
| 4082 | HE798556.1 | CCH14692.1 | open | 429 [NA] | 142 [AA] | 4718454-4718882 | SMD_4197 | hypothetical protein |
| 4083 | HE798556.1 | CCH14693.1 | open | 780 [NA] | 259 [AA] | 4718949-4719728 | SMD_4198 | hypothetical protein |
| 4084 | HE798556.1 | CCH14694.1 | open | 3381 [NA] | 1126 [AA] | 4719883-4723263 | SMD_4199 | hypothetical protein |
| 4085 | HE798556.1 | CCH14695.1 | open | 702 [NA] | 233 [AA] | 4723280-4723981 | SMD_4200 | hypothetical protein |
| 4086 | HE798556.1 | CCH14696.1 | open | 1470 [NA] | 489 [AA] | 4723968-4725437 | SMD_4201 | CBSS-498211.3.peg.1514: hypothetical protein |
| 4087 | HE798556.1 | CCH14697.1 | open | 612 [NA] | 203 [AA] | 4725550-4726161 | SMD_4202 | GTP cyclohydrolase I |
| 4088 | HE798556.1 | CCH14698.1 | open | 429 [NA] | 142 [AA] | 4726787-4727215 | SMD_4203 | Transcriptional regulator, MarR family |
| 4089 | HE798556.1 | CCH14699.1 | open | 183 [NA] | 60 [AA] | 4727351-4727533 | SMD_4204 | membrane protein, putative |
| 4090 | HE798556.1 | CCH14700.1 | open | 918 [NA] | 305 [AA] | 4727530-4728447 | SMD_4205 | fusaric acid resistance protein |
| 4091 | HE798556.1 | CCH14701.1 | open | 1461 [NA] | 486 [AA] | 4728444-4729904 | SMD_4206 | Outer membrane component of tripartite multidrug resistance system |
| 4092 | HE798556.1 | CCH14702.1 | open | 2040 [NA] | 679 [AA] | 4729908-4731947 | SMD_4207 | hypothetical protein |
| 4093 | HE798556.1 | CCH14703.1 | open | 399 [NA] | 132 [AA] | 4732042-4732440 | SMD_4208 | hypothetical protein |
| 4094 | HE798556.1 | CCH14704.1 | open | 1881 [NA] | 626 [AA] | 4732661-4734541 | SMD_4209 | Exodeoxyribonuclease V alpha chain |
| 4095 | HE798556.1 | CCH14705.1 | open | 3678 [NA] | 1225 [AA] | 4734538-4738215 | SMD_4210 | Exodeoxyribonuclease V beta chain |
| 4096 | HE798556.1 | CCH14706.1 | open | 3342 [NA] | 1113 [AA] | 4738212-4741553 | SMD_4211 | Exodeoxyribonuclease V gamma chain |
| 4097 | HE798556.1 | CCH14707.1 | open | 789 [NA] | 262 [AA] | 4741746-4742534 | SMD_4212 | Uncharacterized ABC transporter, ATP-binding protein YrbF |
| 4098 | HE798556.1 | CCH14708.1 | open | 750 [NA] | 249 [AA] | 4742534-4743283 | SMD_4213 | Uncharacterized ABC transporter, permease component YrbE |
| 4099 | HE798556.1 | CCH14709.1 | open | 525 [NA] | 174 [AA] | 4743343-4743867 | SMD_4214 | Uncharacterized ABC transporter, periplasmic component YrbD |
| 4100 | HE798556.1 | CCH14710.1 | open | 669 [NA] | 222 [AA] | 4743864-4744532 | SMD_4215 | Uncharacterized ABC transporter, auxiliary component YrbC |
| 4101 | HE798556.1 | CCH14711.1 | open | 312 [NA] | 103 [AA] | 4744522-4744833 | SMD_4216 | hypothetical protein |
| 4102 | HE798556.1 | CCH14712.1 | open | 1011 [NA] | 336 [AA] | 4744835-4745845 | SMD_4217 | Lipoprotein |
| 4103 | HE798556.1 | CCH14713.1 | open | 546 [NA] | 181 [AA] | 4745931-4746476 | SMD_4218 | Glutathione peroxidase |
| 4104 | HE798556.1 | CCH14714.1 | open | 405 [NA] | 134 [AA] | 4746603-4747007 | SMD_4219 | hypothetical protein |
| 4105 | HE798556.1 | CCH14715.1 | open | 1569 [NA] | 522 [AA] | 4747054-4748622 | SMD_4220 | DNA recombination protein RmuC |
| 4106 | HE798556.1 | CCH14716.1 | open | 603 [NA] | 200 [AA] | 4748679-4749281 | SMD_4221 | Uncharacterized glutathione S-transferase-like protein |
| 4107 | HE798556.1 | CCH14717.1 | open | 1008 [NA] | 335 [AA] | 4749346-4750353 | SMD_4222 | Bifunctional protein: zinc-containing alcohol dehydrogenase quinone oxidoreductase (NADPH:quinone reductase) |
| 4108 | HE798556.1 | CCH14718.1 | open | 972 [NA] | 323 [AA] | 4750445-4751416 | SMD_4223 | Transcriptional regulator |
| 4109 | HE798556.1 | CCH14719.1 | open | 630 [NA] | 209 [AA] | 4751432-4752061 | SMD_4224 | Threonine efflux protein |
| 4110 | HE798556.1 | CCH14720.1 | open | 438 [NA] | 145 [AA] | 4752058-4752495 | SMD_4225 | hypothetical protein |
| 4111 | HE798556.1 | CCH14721.1 | open | 903 [NA] | 300 [AA] | 4752519-4753421 | SMD_4226 | Transcriptional regulator, LysR family |
| 4112 | HE798556.1 | CCH14722.1 | open | 996 [NA] | 331 [AA] | 4753543-4754538 | SMD_4227 | Aldo-keto reductase |
| 4113 | HE798556.1 | CCH14723.1 | open | 1428 [NA] | 475 [AA] | 4754714-4756141 | SMD_4228 | amino acid transporter |
| 4114 | HE798556.1 | CCH14724.1 | open | 1242 [NA] | 413 [AA] | 4756225-4757466 | SMD_4229 | Dipeptidase |
| 4115 | HE798556.1 | CCH14725.1 | open | 1170 [NA] | 389 [AA] | 4757602-4758771 | SMD_4230 | LSU m5C1962 methyltransferase RlmI |
| 4116 | HE798556.1 | CCH14726.1 | open | 963 [NA] | 320 [AA] | 4759158-4760120 | SMD_4232 | export protein |
| 4117 | HE798556.1 | CCH14727.1 | open | 771 [NA] | 256 [AA] | 4760227-4760997 | SMD_4233 | Probable integral membrane protein |
| 4118 | HE798556.1 | CCH14728.1 | open | 1107 [NA] | 368 [AA] | 4761151-4762257 | SMD_4234 | Glycerophosphoryl diester phosphodiesterase |
| 4119 | HE798556.1 | CCH14729.1 | open | 1350 [NA] | 449 [AA] | 4762405-4763754 | SMD_4235 | GTPase and tRNA-U34 5-formylation enzyme TrmE |
| 4120 | HE798556.1 | CCH14730.1 | open | 2673 [NA] | 890 [AA] | 4763758-4766430 | SMD_4236 | Polysaccharide deacetylase, caspase activity |
| 4121 | HE798556.1 | CCH14731.1 | open | 1716 [NA] | 571 [AA] | 4766546-4768261 | SMD_4237 | Inner membrane protein translocase component YidC, long form |
| 4122 | HE798556.1 | CCH14732.1 | open | 366 [NA] | 121 [AA] | 4768261-4768626 | SMD_4238 | Ribonuclease P protein component |
| 4123 | HE798556.1 | CCH14733.1 | open | 141 [NA] | 46 [AA] | 4768761-4768901 | SMD_4239 | LSU ribosomal protein L34p |