Genome Explorer: Agrobacterium tumefaciens str. Cherry 2E-2-2 (SEQF2482.1)
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NCBI Annotation for SEQF2482.1
| Genome selected: Agrobacterium tumefaciens str. Cherry 2E-2-2 | |||
| Contigs: | 112 | Bases: | 5425293 bps |
| CDS: | 5045 | rRNA: | 2 |
| tmRNA: | 0 | tRNA: | 43 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5001 | APCC01000098.1 | EMS94847.1 | open | 1233 [NA] | 410 [AA] | 5123-6355 | H009_25260 | sugar ABC transporter substrate-binding protein |
| 5002 | APCC01000098.1 | EMS94848.1 | open | 723 [NA] | 240 [AA] | 6577-7299 | H009_25265 | abortive infection protein |
| 5003 | APCC01000098.1 | EMS94849.1 | open | 90 [NA] | 29 [AA] | 7366->7455 | H009_25270 | mannose-1-phosphate guanylyltransferase |
| 5004 | APCC01000099.1 | EMS94834.1 | open | 342 [NA] | 113 [AA] | 1-342 | H009_25275 | DNA polymerase-like protein |
| 5005 | APCC01000099.1 | EMS94835.1 | open | 183 [NA] | 60 [AA] | 915-1097 | H009_25280 | Helicase subunit of the DNA excision repair complex |
| 5006 | APCC01000099.1 | EMS94836.1 | open | 924 [NA] | 307 [AA] | 1315-2238 | H009_25285 | hypothetical protein |
| 5007 | APCC01000099.1 | EMS94837.1 | open | 597 [NA] | 198 [AA] | 2199-2795 | H009_25290 | hypothetical protein |
| 5008 | APCC01000099.1 | EMS94838.1 | open | 462 [NA] | 153 [AA] | 2792-3253 | H009_25295 | hypothetical protein |
| 5009 | APCC01000099.1 | EMS94839.1 | open | 603 [NA] | 200 [AA] | 3619-4221 | H009_25300 | hypothetical protein |
| 5010 | APCC01000099.1 | EMS94840.1 | open | 402 [NA] | 133 [AA] | 4234-4635 | H009_25305 | hypothetical protein |
| 5011 | APCC01000099.1 | EMS94841.1 | open | 522 [NA] | 174 [AA] | 4765->5286 | H009_25310 | hypothetical protein |
| 5012 | APCC01000100.1 | EMS94831.1 | open | 381 [NA] | 127 [AA] | <1-381 | H009_25315 | OmpA family protein |
| 5013 | APCC01000100.1 | EMS94832.1 | open | 774 [NA] | 257 [AA] | 697-1470 | H009_25320 | ABC transporter, substrate binding protein (amino acid) |
| 5014 | APCC01000100.1 | EMS94833.1 | open | 804 [NA] | 267 [AA] | 1583-2386 | H009_25325 | ABC transporter, membrane spanning protein (amino acid) |
| 5015 | APCC01000101.1 | EMS94830.1 | open | 345 [NA] | 114 [AA] | 373-717 | H009_25330 | hypothetical protein |
| 5016 | APCC01000102.1 | EMS94821.1 | open | 1083 [NA] | 360 [AA] | 140-1222 | H009_25335 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
| 5017 | APCC01000102.1 | EMS94822.1 | open | 1131 [NA] | 376 [AA] | 1222-2352 | H009_25340 | queuine tRNA-ribosyltransferase |
| 5018 | APCC01000102.1 | EMS94823.1 | open | 1158 [NA] | 385 [AA] | 2525-3682 | H009_25345 | aminodeoxychorismate synthase |
| 5019 | APCC01000102.1 | EMS94824.1 | open | 1278 [NA] | 425 [AA] | 3683-4960 | H009_25350 | Orn/DAP/Arg decarboxylase 2 |
| 5020 | APCC01000102.1 | EMS94825.1 | open | 1533 [NA] | 510 [AA] | 4944-6476 | H009_25355 | long-chain fatty acid-CoA ligase |
| 5021 | APCC01000102.1 | EMS94826.1 | open | 264 [NA] | 87 [AA] | 6473-6736 | H009_25360 | hypothetical protein |
| 5022 | APCC01000102.1 | EMS94827.1 | open | 741 [NA] | 246 [AA] | 6842-7582 | H009_25365 | hypothetical protein |
| 5023 | APCC01000102.1 | EMS94828.1 | open | 1128 [NA] | 375 [AA] | 7870-8997 | H009_25370 | alcohol dehydrogenase |
| 5024 | APCC01000102.1 | EMS94829.1 | open | 384 [NA] | 127 [AA] | 9426-9809 | H009_25375 | hypothetical protein |
| 5025 | APCC01000103.1 | EMS94820.1 | open | 295 [NA] | 98 [AA] | 357->651 | H009_25380 | hypothetical protein |
| 5026 | APCC01000104.1 | EMS94819.1 | open | 507 [NA] | 169 [AA] | <1->507 | H009_25385 | mannose-1-phosphate guanylyltransferase |
| 5027 | APCC01000105.1 | EMS94814.1 | open | 2664 [NA] | 887 [AA] | 18-2681 | H009_25390 | alanyl-tRNA ligase |
| 5028 | APCC01000105.1 | EMS94815.1 | open | 1086 [NA] | 361 [AA] | 2914-3999 | H009_25395 | recombinase A |
| 5029 | APCC01000105.1 | EMS94816.1 | open | 942 [NA] | 313 [AA] | 4246-5187 | H009_25400 | carbohydrate kinase |
| 5030 | APCC01000105.1 | EMS94817.1 | open | 924 [NA] | 307 [AA] | 5217-6140 | H009_25405 | hypothetical protein |
| 5031 | APCC01000105.1 | EMS94818.1 | open | 1908 [NA] | 635 [AA] | 6387->8296 | H009_25410 | OmpA family protein |
| 5032 | APCC01000106.1 | EMS94811.1 | open | 873 [NA] | 290 [AA] | 1-873 | H009_25415 | sorbitol/mannitol ABC transporter permease |
| 5033 | APCC01000106.1 | EMS94812.1 | open | 825 [NA] | 274 [AA] | 886-1710 | H009_25420 | sorbitol/mannitol ABC transporter permease |
| 5034 | APCC01000106.1 | EMS94813.1 | open | 554 [NA] | 185 [AA] | 1723->2276 | H009_25425 | sugar ABC transporter nucleotide-binding protein/ATPase |
| 5035 | APCC01000107.1 | EMS94810.1 | open | 1176 [NA] | 391 [AA] | 1-1176 | H009_25430 | elongation factor Tu |
| 5036 | APCC01000108.1 | EMS94809.1 | open | 566 [NA] | 189 [AA] | <1->567 | H009_25435 | hypothetical protein |
| 5037 | APCC01000109.1 | EMS94807.1 | open | 414 [NA] | 138 [AA] | <1-414 | H009_25440 | LecA |
| 5038 | APCC01000109.1 | EMS94808.1 | open | 977 [NA] | 325 [AA] | 1386->2362 | H009_25445 | hydantoin utilization protein A |
| 5039 | APCC01000110.1 | EMS94804.1 | open | 1503 [NA] | 500 [AA] | <1-1504 | H009_25450 | hydantoin utilization protein B |
| 5040 | APCC01000110.1 | EMS94805.1 | open | 1014 [NA] | 337 [AA] | 1798-2811 | H009_25455 | L-asparaginase |
| 5041 | APCC01000110.1 | EMS94806.1 | open | 195 [NA] | 64 [AA] | 2888->3083 | H009_25460 | LysR family transcriptional regulator |
| 5042 | APCC01000111.1 | EMS94802.1 | open | 858 [NA] | 285 [AA] | <1-859 | H009_25465 | hypothetical protein |
| 5043 | APCC01000111.1 | EMS94803.1 | open | 412 [NA] | 137 [AA] | 882->1293 | H009_25470 | N-methylhydantoinase B/acetone carboxylase, alpha subunit |
| 5044 | APCC01000112.1 | EMS94800.1 | open | 282 [NA] | 93 [AA] | 31-312 | H009_25475 | hypothetical protein |
| 5045 | APCC01000112.1 | EMS94801.1 | open | 183 [NA] | 60 [AA] | 501-683 | H009_25480 | hypothetical protein |