Genome Explorer: Agrobacterium tumefaciens 183 (SEQF8749.1)
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NCBI Annotation for SEQF8749.1
| Genome selected: Agrobacterium tumefaciens 183 | |||
| Contigs: | 5 | Bases: | 5520201 bps |
| CDS: | 198 | rRNA: | 10 |
| tmRNA: | 1 | tRNA: | 51 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5001 | CP029048.1 | QAB01301.1 | open | 1986 [NA] | 661 [AA] | 137544-139529 | DC439_26365 | hydantoinase B/oxoprolinase family protein |
| 5002 | CP029048.1 | QAB01302.1 | open | 1014 [NA] | 337 [AA] | 139824-140837 | DC439_26370 | asparaginase |
| 5003 | CP029048.1 | QAB01303.1 | open | 1044 [NA] | 347 [AA] | 142076-143119 | DC439_26380 | ABC transporter substrate-binding protein |
| 5004 | CP029048.1 | QAB01304.1 | open | 885 [NA] | 294 [AA] | 143132-144016 | DC439_26385 | ABC transporter permease |
| 5005 | CP029048.1 | QAB01305.1 | open | 807 [NA] | 268 [AA] | 144021-144827 | DC439_26390 | ABC transporter permease |
| 5006 | CP029048.1 | QAB01306.1 | open | 1086 [NA] | 361 [AA] | 144824-145909 | DC439_26395 | ABC transporter ATP-binding protein |
| 5007 | CP029048.1 | QAB01307.1 | open | 1323 [NA] | 440 [AA] | 145993-147315 | DC439_26400 | hypothetical protein |
| 5008 | CP029048.1 | QAB01308.1 | open | 1314 [NA] | 437 [AA] | 147410-148723 | DC439_26405 | conjugal transfer protein TrbI |
| 5009 | CP029048.1 | QAB01309.1 | open | 477 [NA] | 158 [AA] | 148736-149212 | DC439_26410 | conjugal transfer protein TrbH |
| 5010 | CP029048.1 | QAB01310.1 | open | 663 [NA] | 220 [AA] | 150084-150746 | DC439_26420 | conjugal transfer protein TrbF |
| 5011 | CP029048.1 | QAB01311.1 | open | 1197 [NA] | 398 [AA] | 150761-151957 | DC439_26425 | P-type conjugative transfer protein TrbL |
| 5012 | CP029048.1 | QAB01312.1 | open | 219 [NA] | 72 [AA] | 151951-152169 | DC439_26430 | entry exclusion protein TrbK |
| 5013 | CP029048.1 | QAB01313.1 | open | 810 [NA] | 269 [AA] | 152166-152975 | DC439_26435 | P-type conjugative transfer protein TrbJ |
| 5014 | CP029048.1 | QAB01314.1 | open | 2469 [NA] | 822 [AA] | 152947-155415 | DC439_26440 | conjugal transfer protein TrbE |
| 5015 | CP029048.1 | QAB01315.1 | open | 300 [NA] | 99 [AA] | 155426-155725 | DC439_26445 | conjugal transfer protein TrbD |
| 5016 | CP029048.1 | QAB01316.1 | open | 402 [NA] | 133 [AA] | 155718-156119 | DC439_26450 | conjugal transfer protein TrbC |
| 5017 | CP029048.1 | QAB01317.1 | open | 972 [NA] | 323 [AA] | 156109-157080 | DC439_26455 | P-type conjugative transfer ATPase TrbB |
| 5018 | CP029048.1 | QAB01318.1 | open | 636 [NA] | 211 [AA] | 157077-157712 | DC439_26460 | GNAT family N-acetyltransferase |
| 5019 | CP029048.1 | QAB01319.1 | open | 1113 [NA] | 370 [AA] | 159421-160533 | DC439_26470 | plasmid partitioning protein RepB |
| 5020 | CP029048.1 | QAB01320.1 | open | 1320 [NA] | 439 [AA] | 160748-162067 | DC439_26475 | replication initiation protein RepC |
| 5021 | CP029048.1 | QAB01321.1 | open | 942 [NA] | 313 [AA] | 162076-163017 | DC439_26480 | recombinase family protein |
| 5022 | CP029048.1 | QAB01322.1 | open | 1113 [NA] | 370 [AA] | 163299-164411 | DC439_26485 | DUF1612 domain-containing protein |
| 5023 | CP029048.1 | QAB01323.1 | open | 591 [NA] | 196 [AA] | 164500-165090 | DC439_26490 | DUF433 domain-containing protein |
| 5024 | CP029048.1 | QAB01324.1 | open | 453 [NA] | 150 [AA] | 165087-165539 | DC439_26495 | type II toxin-antitoxin system VapC family toxin |
| 5025 | CP029048.1 | QAB01325.1 | open | 570 [NA] | 189 [AA] | 166136-166705 | DC439_26505 | recombinase family protein |
| 5026 | CP029048.1 | QAB01326.1 | open | 717 [NA] | 238 [AA] | 168112-168828 | DC439_26515 | hypothetical protein |
| 5027 | CP029048.1 | QAB01327.1 | open | 585 [NA] | 194 [AA] | 168837-169421 | DC439_26520 | RES domain-containing protein |
| 5028 | CP029048.1 | QAB01328.1 | open | 828 [NA] | 275 [AA] | 169589-170416 | DC439_26525 | hypothetical protein |
| 5029 | CP029048.1 | QAB01329.1 | open | 405 [NA] | 134 [AA] | 170514-170918 | DC439_26530 | hypothetical protein |
| 5030 | CP029048.1 | QAB01330.1 | open | 393 [NA] | 130 [AA] | 170947-171339 | DC439_26535 | hypothetical protein |
| 5031 | CP029048.1 | QAB01331.1 | open | 1221 [NA] | 406 [AA] | 171343-172563 | DC439_26540 | hypothetical protein |
| 5032 | CP029048.1 | QAB01332.1 | open | 1143 [NA] | 380 [AA] | 172573-173715 | DC439_26545 | hypothetical protein |
| 5033 | CP029048.1 | QAB01333.1 | open | 567 [NA] | 188 [AA] | 173872-174438 | DC439_26550 | hypothetical protein |
| 5034 | CP029048.1 | QAB01334.1 | open | 996 [NA] | 331 [AA] | 175294-176289 | DC439_26560 | integrase |
| 5035 | CP029048.1 | QAB01335.1 | open | 627 [NA] | 208 [AA] | 176397-177023 | DC439_26565 | NUDIX domain-containing protein |
| 5036 | CP029048.1 | QAB01336.1 | open | 1119 [NA] | 372 [AA] | 177486-178604 | DC439_26570 | hypothetical protein |
| 5037 | CP029048.1 | QAB01337.1 | open | 414 [NA] | 137 [AA] | 178820-179233 | DC439_26575 | hypothetical protein |
| 5038 | CP029048.1 | QAB01338.1 | open | 597 [NA] | 198 [AA] | 180336-180932 | DC439_26585 | mobile mystery protein B |
| 5039 | CP029048.1 | QAB01339.1 | open | 462 [NA] | 153 [AA] | 180929-181390 | DC439_26590 | mobile mystery protein A |
| 5040 | CP029048.1 | QAB01340.1 | open | 603 [NA] | 200 [AA] | 181772-182374 | DC439_26595 | DUF1419 domain-containing protein |
| 5041 | CP029048.1 | QAB01341.1 | open | 402 [NA] | 133 [AA] | 182387-182788 | DC439_26600 | DUF3085 domain-containing protein |
| 5042 | CP029048.1 | QAB01342.1 | open | 5088 [NA] | 1695 [AA] | 182918-188005 | DC439_26605 | lactate dehydrogenase |
| 5043 | CP029048.1 | QAB01343.1 | open | 1788 [NA] | 595 [AA] | 188313-190100 | DC439_26610 | plasmid partitioning protein |
| 5044 | CP029048.1 | QAB01344.1 | open | 474 [NA] | 157 [AA] | 190197-190670 | DC439_26615 | hypothetical protein |
| 5045 | CP029048.1 | QAB01345.1 | open | 888 [NA] | 295 [AA] | 190667-191554 | DC439_26620 | hypothetical protein |
| 5046 | CP029048.1 | QAB01346.1 | open | 306 [NA] | 101 [AA] | 192085-192390 | DC439_26635 | alkylphosphonate utilization protein |
| 5047 | CP029048.1 | QAB01347.1 | open | 522 [NA] | 173 [AA] | 192387-234 | DC439_25665 | hypothetical protein |
| 5048 | CP029048.1 | QAB01348.1 | open | 342 [NA] | 113 [AA] | 6033-6374 | DC439_25705 | hypothetical protein |
| 5049 | CP029048.1 | QAB01349.1 | open | 1950 [NA] | 649 [AA] | 16484-18433 | DC439_25780 | Ti-type conjugative transfer system protein TraG |
| 5050 | CP029048.1 | QAB01350.1 | open | 3585 [NA] | 1194 [AA] | 19193-22777 | DC439_25795 | Ti-type conjugative transfer relaxase TraA |
| 5051 | CP029048.1 | QAB01351.1 | open | 777 [NA] | 258 [AA] | 40420-41196 | DC439_25885 | DeoR family transcriptional regulator |
| 5052 | CP029048.1 | QAB01352.1 | open | 912 [NA] | 303 [AA] | 42904-43815 | DC439_25895 | ABC transporter ATP-binding protein |
| 5053 | CP029048.1 | QAB01353.1 | open | 810 [NA] | 269 [AA] | 47425-48234 | DC439_25920 | arabinose phosphate phosphatase |
| 5054 | CP029048.1 | QAB01354.1 | open | 801 [NA] | 266 [AA] | 53981-54781 | DC439_25960 | phosphodiesterase |
| 5055 | CP029048.1 | QAB01355.1 | open | 336 [NA] | 111 [AA] | 57855-58190 | DC439_25990 | hypothetical protein |
| 5056 | CP029048.1 | QAB01356.1 | open | 738 [NA] | 245 [AA] | 74185-74922 | DC439_26080 | lytic transglycosylase |
| 5057 | CP029048.1 | QAB01357.1 | open | 888 [NA] | 295 [AA] | 78762-79649 | DC439_26105 | protein VirB6 |
| 5058 | CP029048.1 | QAB01358.1 | open | 762 [NA] | 253 [AA] | 103013-103774 | DC439_26240 | arabinose phosphate phosphatase |
| 5059 | CP029048.1 | QAB01359.1 | open | 1560 [NA] | 519 [AA] | 133237-134796 | DC439_26355 | polyamine ABC transporter substrate-binding protein |
| 5060 | CP029048.1 | QAB01360.1 | open | 957 [NA] | 318 [AA] | 140915-141871 | DC439_26375 | LysR family transcriptional regulator |
| 5061 | CP029048.1 | QAB01361.1 | open | 855 [NA] | 284 [AA] | 149212-150066 | DC439_26415 | P-type conjugative transfer protein TrbG |
| 5062 | CP029048.1 | QAB01362.1 | open | 1218 [NA] | 405 [AA] | 158076-159293 | DC439_26465 | plasmid partitioning protein RepA |
| 5063 | CP029048.1 | QAB01363.1 | open | 1218 [NA] | 405 [AA] | 166787-168004 | DC439_26510 | MFS transporter |
| 5064 | CP029048.1 | QAB01364.1 | open | 1074 [NA] | 357 [AA] | 179302-180375 | DC439_26580 | DUF3991 domain-containing protein |