Genome Explorer: Agrobacterium tumefaciens Y2/73 (SEQF8761.1)
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NCBI Annotation for SEQF8761.1
| Genome selected: Agrobacterium tumefaciens Y2/73 | |||
| Contigs: | 48 | Bases: | 6071360 bps |
| CDS: | 133 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 49 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5501 | JAALYI010000033.1 | NTA14302.1 | open | 1764 [NA] | 587 [AA] | 43816-45579 | G6M05_28405 | caspase family protein |
| 5502 | JAALYI010000033.1 | NTA14303.1 | open | 1803 [NA] | 600 [AA] | 46050-47852 | G6M05_28410 | ParB N-terminal domain-containing protein |
| 5503 | JAALYI010000033.1 | NTA14304.1 | open | 474 [NA] | 157 [AA] | 47953-48426 | G6M05_28415 | hypothetical protein |
| 5504 | JAALYI010000033.1 | NTA14305.1 | open | 597 [NA] | 198 [AA] | 49152-49748 | G6M05_28420 | hypothetical protein |
| 5505 | JAALYI010000033.1 | NTA14306.1 | open | 669 [NA] | 222 [AA] | 49902-50570 | G6M05_28425 | HAD family phosphatase |
| 5506 | JAALYI010000033.1 | NTA14307.1 | open | 927 [NA] | 308 [AA] | 50982-51908 | G6M05_28430 | ArdC family protein |
| 5507 | JAALYI010000033.1 | NTA14308.1 | open | 867 [NA] | 288 [AA] | 51997-52863 | G6M05_28435 | hypothetical protein |
| 5508 | JAALYI010000033.1 | NTA14309.1 | open | 246 [NA] | 81 [AA] | 53366-53611 | G6M05_28440 | hypothetical protein |
| 5509 | JAALYI010000033.1 | NTA14310.1 | open | 318 [NA] | 105 [AA] | 53784-54101 | G6M05_28445 | DUF736 domain-containing protein |
| 5510 | JAALYI010000033.1 | NTA14311.1 | open | 1023 [NA] | 340 [AA] | 54533-55555 | G6M05_28450 | IS110 family transposase |
| 5511 | JAALYI010000033.1 | NTA14312.1 | open | 165 [NA] | 54 [AA] | 55757-55921 | G6M05_28455 | hypothetical protein |
| 5512 | JAALYI010000033.1 | NTA14313.1 | open | 279 [NA] | 92 [AA] | 55963-56241 | G6M05_28460 | HU family DNA-binding protein |
| 5513 | JAALYI010000033.1 | NTA14314.1 | open | 258 [NA] | 85 [AA] | 56380-56637 | G6M05_28465 | WGR domain-containing protein |
| 5514 | JAALYI010000033.1 | NTA14315.1 | open | 510 [NA] | 169 [AA] | 56848-57357 | G6M05_28470 | thermonuclease family protein |
| 5515 | JAALYI010000033.1 | NTA14316.1 | open | 1923 [NA] | 640 [AA] | 57354-59276 | G6M05_28475 | Ti-type conjugative transfer system protein TraG |
| 5516 | JAALYI010000033.1 | NTA14317.1 | open | 216 [NA] | 71 [AA] | 59263-59478 | G6M05_28480 | type IV conjugative transfer system coupling protein TraD |
| 5517 | JAALYI010000033.1 | NTA14318.1 | open | 297 [NA] | 98 [AA] | 59483-59779 | G6M05_28485 | TraC family protein |
| 5518 | JAALYI010000033.1 | NTA14319.1 | open | 3303 [NA] | 1100 [AA] | 60036-63338 | G6M05_28490 | Ti-type conjugative transfer relaxase TraA |
| 5519 | JAALYI010000033.1 | NTA14320.1 | open | 528 [NA] | 175 [AA] | 63335-63862 | G6M05_28495 | conjugative transfer signal peptidase TraF |
| 5520 | JAALYI010000033.1 | NTA14321.1 | open | 1170 [NA] | 389 [AA] | 63879-65048 | G6M05_28500 | conjugal transfer protein TraB |
| 5521 | JAALYI010000033.1 | NTA14322.1 | open | 633 [NA] | 210 [AA] | 65062-65694 | G6M05_28505 | conjugal transfer protein TraH |
| 5522 | JAALYI010000033.1 | NTA14323.1 | open | 324 [NA] | 107 [AA] | 65710-66033 | G6M05_28510 | type II toxin-antitoxin system RelE/ParE family toxin |
| 5523 | JAALYI010000033.1 | NTA14324.1 | open | 255 [NA] | 84 [AA] | 66030-66284 | G6M05_28515 | antitoxin |
| 5524 | JAALYI010000033.1 | NTA14325.1 | open | 153 [NA] | 50 [AA] | 66358-66510 | G6M05_28520 | hypothetical protein |
| 5525 | JAALYI010000033.1 | NTA14326.1 | open | 309 [NA] | 102 [AA] | 66889-67197 | G6M05_28525 | transcriptional regulator |
| 5526 | JAALYI010000033.1 | NTA14327.1 | open | 1038 [NA] | 345 [AA] | 67325-68362 | G6M05_28530 | aldose 1-epimerase |
| 5527 | JAALYI010000033.1 | NTA14328.1 | open | 1650 [NA] | 549 [AA] | 68400-70049 | G6M05_28535 | Na/Pi cotransporter family protein |
| 5528 | JAALYI010000033.1 | NTA14329.1 | open | 975 [NA] | 324 [AA] | 70249-71223 | G6M05_28540 | DUF4432 family protein |
| 5529 | JAALYI010000033.1 | NTA14330.1 | open | 522 [NA] | 173 [AA] | 71239-71760 | G6M05_28545 | NUDIX hydrolase |
| 5530 | JAALYI010000033.1 | NTA14331.1 | open | 849 [NA] | 282 [AA] | 71939-72787 | G6M05_28550 | inositol monophosphatase |
| 5531 | JAALYI010000033.1 | NTA14332.1 | open | 801 [NA] | 266 [AA] | 72744-73544 | G6M05_28555 | phosphodiesterase |
| 5532 | JAALYI010000033.1 | NTA14333.1 | open | 867 [NA] | 288 [AA] | 73560-74426 | G6M05_28560 | ABC transporter permease |
| 5533 | JAALYI010000033.1 | NTA14334.1 | open | 921 [NA] | 306 [AA] | 74426-75346 | G6M05_28565 | ABC transporter permease |
| 5534 | JAALYI010000033.1 | NTA14335.1 | open | 999 [NA] | 332 [AA] | 75343-76341 | G6M05_28570 | ATP-binding cassette domain-containing protein |
| 5535 | JAALYI010000033.1 | NTA14336.1 | open | 948 [NA] | 315 [AA] | 76338-77285 | G6M05_28575 | ABC transporter ATP-binding protein |
| 5536 | JAALYI010000033.1 | NTA14337.1 | open | 1566 [NA] | 521 [AA] | 77347-78912 | G6M05_28580 | ABC transporter substrate-binding protein |
| 5537 | JAALYI010000033.1 | NTA14338.1 | open | 792 [NA] | 263 [AA] | 78957-79748 | G6M05_28585 | DeoR/GlpR transcriptional regulator |
| 5538 | JAALYI010000033.1 | NTA14339.1 | open | 1062 [NA] | 353 [AA] | 80437-81498 | G6M05_28590 | ornithine cyclodeaminase |
| 5539 | JAALYI010000033.1 | NTA14340.1 | open | 375 [NA] | 124 [AA] | 81940-82314 | G6M05_28600 | hypothetical protein |
| 5540 | JAALYI010000033.1 | NTA14341.1 | open | 1140 [NA] | 379 [AA] | 82324-83463 | G6M05_28605 | FAD-binding oxidoreductase |
| 5541 | JAALYI010000033.1 | NTA14342.1 | open | 750 [NA] | 249 [AA] | 83460->84210 | G6M05_28610 | FAD/NAD(P)-binding oxidoreductase |
| 5542 | JAALYI010000034.1 | NTA14343.1 | open | 252 [NA] | 84 [AA] | <1-252 | G6M05_28615 | polyamine ABC transporter substrate-binding protein |
| 5543 | JAALYI010000034.1 | NTA14344.1 | open | 705 [NA] | 234 [AA] | 606-1310 | G6M05_28620 | transcriptional regulator TraR |
| 5544 | JAALYI010000034.1 | NTA14345.1 | open | 744 [NA] | 247 [AA] | 1440->2184 | G6M05_28625 | ABC transporter permease |
| 5545 | JAALYI010000035.1 | NTA14346.1 | open | 1124 [NA] | 375 [AA] | 90->1213 | G6M05_28630 | DUF1612 and helix-turn-helix domain-containing protein |
| 5546 | JAALYI010000036.1 | NTA14347.1 | open | 714 [NA] | 237 [AA] | 714-1427 | G6M05_28640 | DUF2971 domain-containing protein |
| 5547 | JAALYI010000036.1 | NTA14348.1 | open | 780 [NA] | 259 [AA] | 1781-2560 | G6M05_28645 | hypothetical protein |
| 5548 | JAALYI010000036.1 | NTA14349.1 | open | 1671 [NA] | 556 [AA] | 2855-4525 | G6M05_28650 | TIGR04141 family sporadically distributed protein |
| 5549 | JAALYI010000036.1 | NTA14350.1 | open | 852 [NA] | 283 [AA] | 4763-5614 | G6M05_28655 | AbiV family abortive infection protein |
| 5550 | JAALYI010000036.1 | NTA14351.1 | open | 1767 [NA] | 588 [AA] | 5769-7535 | G6M05_28660 | DUF262 domain-containing protein |
| 5551 | JAALYI010000036.1 | NTA14352.1 | open | 1212 [NA] | 403 [AA] | 9884-11095 | G6M05_28670 | restriction endonuclease subunit S |
| 5552 | JAALYI010000036.1 | NTA14353.1 | open | 588 [NA] | 195 [AA] | 11092-11679 | G6M05_28675 | hypothetical protein |
| 5553 | JAALYI010000036.1 | NTA14354.1 | open | 3072 [NA] | 1023 [AA] | 11687-14758 | G6M05_28680 | type I restriction endonuclease subunit R |
| 5554 | JAALYI010000036.1 | NTA14355.1 | open | 1311 [NA] | 436 [AA] | 16666->17977 | G6M05_28695 | BID domain-containing protein |
| 5555 | JAALYI010000037.1 | NTA14356.1 | open | 933 [NA] | 311 [AA] | <1-933 | G6M05_28700 | NAD(P)-binding domain-containing protein |
| 5556 | JAALYI010000037.1 | NTA14357.1 | open | 1848 [NA] | 615 [AA] | 1040-2887 | G6M05_28705 | ABC transporter ATP-binding protein |
| 5557 | JAALYI010000037.1 | NTA14358.1 | open | 879 [NA] | 292 [AA] | 2884-3762 | G6M05_28710 | ABC transporter permease |
| 5558 | JAALYI010000037.1 | NTA14359.1 | open | 942 [NA] | 313 [AA] | 3759-4700 | G6M05_28715 | ABC transporter permease |
| 5559 | JAALYI010000037.1 | NTA14360.1 | open | 342 [NA] | 113 [AA] | 4697-5038 | G6M05_28720 | hypothetical protein |
| 5560 | JAALYI010000037.1 | NTA14361.1 | open | 903 [NA] | 300 [AA] | 5138-6040 | G6M05_28725 | LysR family transcriptional regulator |
| 5561 | JAALYI010000037.1 | NTA14362.1 | open | 825 [NA] | 274 [AA] | 6115->6940 | G6M05_28730 | polyamine ABC transporter substrate-binding protein |
| 5562 | JAALYI010000039.1 | NTA14363.1 | open | 999 [NA] | 332 [AA] | 4-1002 | G6M05_28755 | ABC transporter ATP-binding protein |
| 5563 | JAALYI010000039.1 | NTA14364.1 | open | 825 [NA] | 274 [AA] | 1015-1839 | G6M05_28760 | carbohydrate ABC transporter permease |
| 5564 | JAALYI010000039.1 | NTA14365.1 | open | 873 [NA] | 290 [AA] | 1852-2724 | G6M05_28765 | sugar ABC transporter permease |
| 5565 | JAALYI010000040.1 | NTA14366.1 | open | 1065 [NA] | 354 [AA] | 248-1312 | G6M05_28770 | aldo/keto reductase |
| 5566 | JAALYI010000040.1 | NTA14367.1 | open | 588 [NA] | 195 [AA] | 1335->1923 | G6M05_28775 | phosphogluconate dehydratase |
| 5567 | JAALYI010000041.1 | NTA14368.1 | open | 1071 [NA] | 356 [AA] | 140-1210 | G6M05_28780 | IS110 family transposase |
| 5568 | JAALYI010000042.1 | NTA14369.1 | open | 165 [NA] | 54 [AA] | <1-166 | G6M05_28785 | ABC transporter substrate-binding protein |
| 5569 | JAALYI010000042.1 | NTA14370.1 | open | 1110 [NA] | 369 [AA] | 295-1404 | G6M05_28790 | polyamine ABC transporter ATP-binding protein |
| 5570 | JAALYI010000043.1 | NTA14371.1 | open | 183 [NA] | 60 [AA] | 77-259 | G6M05_28795 | SDR family oxidoreductase |
| 5571 | JAALYI010000043.1 | NTA14372.1 | open | 639 [NA] | 212 [AA] | 335-973 | G6M05_28800 | HAD hydrolase-like protein |
| 5572 | JAALYI010000043.1 | NTA14373.1 | open | 225 [NA] | 74 [AA] | 1203->1428 | G6M05_28805 | conjugal transfer protein TrbI |
| 5573 | JAALYI010000044.1 | NTA14374.1 | open | 775 [NA] | 258 [AA] | 243->1017 | G6M05_28810 | IS110 family transposase |
| 5574 | JAALYI010000045.1 | NTA14375.1 | open | 645 [NA] | 214 [AA] | <1-645 | G6M05_28815 | IS110 family transposase |
| 5575 | JAALYI010000046.1 | NTA14376.1 | open | 363 [NA] | 120 [AA] | 351->715 | G6M05_28820 | IS110 family transposase |
| 5576 | JAALYI010000048.1 | NTA14377.1 | open | 591 [NA] | 196 [AA] | 31->622 | G6M05_28830 | IS3-like element IS1312 family transposase |